Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97525.t1 | XP_003603195.2 | 94.3 | 750 | 42 | 1 | 1 | 750 | 1 | 749 | 0.00E+00 | 1362.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97525.t1 | Q9LYG9 | 55.3 | 685 | 296 | 8 | 63 | 739 | 48 | 730 | 7.1e-197 | 688.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97525.t1 | G7J8D9 | 94.3 | 750 | 42 | 1 | 1 | 750 | 1 | 749 | 0.0e+00 | 1362.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene97525 | MS.gene014981 | PPI |
| MS.gene42681 | MS.gene97525 | PPI |
| MS.gene42686 | MS.gene97525 | PPI |
| MS.gene32764 | MS.gene97525 | PPI |
| MS.gene062410 | MS.gene97525 | PPI |
| MS.gene97525 | MS.gene42628 | PPI |
| MS.gene42622 | MS.gene97525 | PPI |
| MS.gene97525 | MS.gene42688 | PPI |
| MS.gene32770 | MS.gene97525 | PPI |
| MS.gene014973 | MS.gene97525 | PPI |
| MS.gene42620 | MS.gene97525 | PPI |
| MS.gene97525 | MS.gene014978 | PPI |
| MS.gene97525 | MS.gene74110 | PPI |
| MS.gene32773 | MS.gene97525 | PPI |
| MS.gene97525 | MS.gene014973 | PPI |
| MS.gene014978 | MS.gene97525 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97525.t1 | MTR_3g104920 | 94.267 | 750 | 42 | 1 | 1 | 750 | 1 | 749 | 0.0 | 1430 |
| MS.gene97525.t1 | MTR_3g104920 | 94.437 | 737 | 41 | 0 | 14 | 750 | 1 | 737 | 0.0 | 1410 |
| MS.gene97525.t1 | MTR_3g104990 | 79.690 | 773 | 132 | 5 | 1 | 750 | 1 | 771 | 0.0 | 1206 |
| MS.gene97525.t1 | MTR_3g104940 | 78.036 | 774 | 144 | 3 | 1 | 750 | 1 | 772 | 0.0 | 1174 |
| MS.gene97525.t1 | MTR_2g041220 | 47.906 | 764 | 340 | 17 | 11 | 739 | 5 | 745 | 0.0 | 651 |
| MS.gene97525.t1 | MTR_8g071250 | 43.093 | 666 | 340 | 11 | 89 | 739 | 47 | 688 | 6.48e-163 | 488 |
| MS.gene97525.t1 | MTR_1g113850 | 38.440 | 718 | 360 | 17 | 82 | 748 | 229 | 915 | 5.60e-145 | 448 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97525.t1 | AT5G12080 | 56.356 | 708 | 284 | 10 | 50 | 739 | 30 | 730 | 0.0 | 785 |
| MS.gene97525.t1 | AT5G12080 | 56.356 | 708 | 284 | 10 | 50 | 739 | 30 | 730 | 0.0 | 785 |
| MS.gene97525.t1 | AT5G12080 | 56.356 | 708 | 284 | 10 | 50 | 739 | 30 | 730 | 0.0 | 785 |
| MS.gene97525.t1 | AT5G19520 | 51.804 | 693 | 316 | 8 | 59 | 739 | 52 | 738 | 0.0 | 707 |
| MS.gene97525.t1 | AT5G19520 | 51.804 | 693 | 316 | 8 | 59 | 739 | 52 | 738 | 0.0 | 707 |
| MS.gene97525.t1 | AT2G17010 | 38.379 | 654 | 363 | 8 | 122 | 740 | 240 | 888 | 2.37e-150 | 462 |
| MS.gene97525.t1 | AT1G78610 | 40.536 | 634 | 337 | 7 | 147 | 747 | 211 | 837 | 5.63e-145 | 446 |
| MS.gene97525.t1 | AT1G53470 | 39.550 | 622 | 323 | 9 | 170 | 746 | 251 | 864 | 4.54e-144 | 444 |
| MS.gene97525.t1 | AT3G14810 | 38.495 | 691 | 361 | 13 | 97 | 744 | 192 | 861 | 9.06e-144 | 444 |
| MS.gene97525.t1 | AT2G17000 | 39.641 | 613 | 330 | 9 | 170 | 748 | 223 | 829 | 6.75e-135 | 419 |
| MS.gene97525.t1 | AT2G17000 | 39.641 | 613 | 330 | 9 | 170 | 748 | 223 | 829 | 1.09e-134 | 419 |
| MS.gene97525.t1 | AT3G14810 | 36.115 | 695 | 337 | 15 | 97 | 744 | 192 | 826 | 7.27e-125 | 393 |
| MS.gene97525.t1 | AT2G17010 | 35.989 | 364 | 196 | 8 | 173 | 505 | 295 | 652 | 2.10e-62 | 221 |
Find 153 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTATACTTTCTACCATATT+TGG | 0.076614 | 7.2:+74357907 | None:intergenic |
| GACACTGTTGCTATCAATTT+TGG | 0.133228 | 7.2:-74359407 | MS.gene97525:CDS |
| TTCACCTAGAACACCTTTAA+TGG | 0.166704 | 7.2:-74359926 | MS.gene97525:CDS |
| AGGATACATATTTGGAGTTT+AGG | 0.218904 | 7.2:-74359733 | MS.gene97525:CDS |
| ACAATGAACTTTCAAGAGTT+TGG | 0.224035 | 7.2:-74357612 | MS.gene97525:CDS |
| CAGCTGTTACTTCACCTTAT+AGG | 0.232327 | 7.2:-74359957 | MS.gene97525:CDS |
| AAGTAACATTCTCTTCTAAA+AGG | 0.242883 | 7.2:+74360001 | None:intergenic |
| ATGACACCAGCAGAGAAAAT+TGG | 0.272110 | 7.2:-74357868 | MS.gene97525:CDS |
| GCATCTCCAGGTTCTTCTTC+TGG | 0.277547 | 7.2:-74359904 | MS.gene97525:CDS |
| GGATACATATTTGGAGTTTA+GGG | 0.285104 | 7.2:-74359732 | MS.gene97525:CDS |
| TTGTTCTACAAACCTTGATT+TGG | 0.285408 | 7.2:+74360044 | None:intergenic |
| CAATGAACTTTCAAGAGTTT+GGG | 0.286227 | 7.2:-74357611 | MS.gene97525:CDS |
| AACTGAGAAGGATACATATT+TGG | 0.299045 | 7.2:-74359741 | MS.gene97525:CDS |
| TTCGGGAGTTCAACTGTTAA+AGG | 0.302616 | 7.2:-74359241 | MS.gene97525:CDS |
| ATTACTACCAAGCTGAAATT+AGG | 0.311064 | 7.2:+74357684 | None:intergenic |
| GGAGTTTAGGGCTTTGGAGG+TGG | 0.320866 | 7.2:-74359720 | MS.gene97525:CDS |
| TCTAAAAGGGTCTCATCAAT+AGG | 0.325584 | 7.2:+74360015 | None:intergenic |
| TTGAACTCCCGAAACTAAAA+TGG | 0.328011 | 7.2:+74359251 | None:intergenic |
| CTATACTTTCTACCATATTT+GGG | 0.329682 | 7.2:+74357908 | None:intergenic |
| ATATTTGGAGTTTAGGGCTT+TGG | 0.330737 | 7.2:-74359726 | MS.gene97525:CDS |
| GAGTTTAGGGCTTTGGAGGT+GGG | 0.335496 | 7.2:-74359719 | MS.gene97525:CDS |
| CATTTGAGAGAACTTGTATC+AGG | 0.336074 | 7.2:+74357477 | None:intergenic |
| TCTCTCCGGGCCTCCACTAA+TGG | 0.337430 | 7.2:-74359311 | MS.gene97525:CDS |
| ACTCCGTAGATTCATGATTA+AGG | 0.340419 | 7.2:-74358580 | MS.gene97525:CDS |
| ACTCTTGTTTCCCTTCTCAT+TGG | 0.349071 | 7.2:-74359451 | MS.gene97525:CDS |
| TTCCCATCCTCTTCCATTAG+TGG | 0.352581 | 7.2:+74359298 | None:intergenic |
| GTACTAGCGGGGTTCATGTT+TGG | 0.355463 | 7.2:-74358213 | MS.gene97525:CDS |
| GAACCTGGAGATGCCATTAA+AGG | 0.366672 | 7.2:+74359913 | None:intergenic |
| AACATTCTTGAAAACATAAT+AGG | 0.371862 | 7.2:+74359009 | None:intergenic |
| TAGTCGCTAGTCTCTTATGC+TGG | 0.373434 | 7.2:+74359833 | None:intergenic |
| TGTTCTACAAACCTTGATTT+GGG | 0.374332 | 7.2:+74360045 | None:intergenic |
| GCTTAGAATACACTGATCTT+AGG | 0.375626 | 7.2:+74360067 | None:intergenic |
| CTTCTGTAATAATTGCTAAT+CGG | 0.375974 | 7.2:+74357931 | None:intergenic |
| AGTAGTGTGGCTTCTTCTAA+TGG | 0.385108 | 7.2:-74358280 | MS.gene97525:CDS |
| TGCATCTACCAAAATCTTCA+TGG | 0.385620 | 7.2:+74359147 | None:intergenic |
| CTACTGGCCCAGGCAGATAC+AGG | 0.387614 | 7.2:-74358534 | MS.gene97525:CDS |
| TCAGTTTGGTTCTCCTTACA+TGG | 0.394428 | 7.2:-74359543 | MS.gene97525:CDS |
| GGTGAATAAGAGTTCCTATA+AGG | 0.395222 | 7.2:+74359943 | None:intergenic |
| TCAACCCATGATCATGATCT+TGG | 0.398144 | 7.2:+74360235 | None:intergenic |
| TTATTACAGAAGCCCAAATA+TGG | 0.398155 | 7.2:-74357920 | MS.gene97525:CDS |
| AGAGAAAGAGGTTATTGATA+TGG | 0.399291 | 7.2:-74359212 | MS.gene97525:CDS |
| TAATTAGCCCTGTATCTGCC+TGG | 0.406972 | 7.2:+74358526 | None:intergenic |
| GATGCCATTAAAGGTGTTCT+AGG | 0.410220 | 7.2:+74359922 | None:intergenic |
| CATTTGTAGCAGGAACTTGT+GGG | 0.411786 | 7.2:+74360115 | None:intergenic |
| AGTTTAGGGCTTTGGAGGTG+GGG | 0.414583 | 7.2:-74359718 | MS.gene97525:CDS |
| ATCCTGACGAAATCATTTAT+AGG | 0.416707 | 7.2:-74359876 | MS.gene97525:CDS |
| CGCGTGGACCATGAAGATTT+TGG | 0.419825 | 7.2:-74359155 | MS.gene97525:CDS |
| TGCCTATAAATGATTTCGTC+AGG | 0.429312 | 7.2:+74359874 | None:intergenic |
| AACAATGTGCATGAACCATT+TGG | 0.430283 | 7.2:+74359657 | None:intergenic |
| TTAGTGGCGAGGACATAGTT+TGG | 0.433932 | 7.2:+74357955 | None:intergenic |
| TTTGGAGTTTAGGGCTTTGG+AGG | 0.436552 | 7.2:-74359723 | MS.gene97525:CDS |
| TATGTTCTGCAGACTCTCTC+CGG | 0.438869 | 7.2:-74359325 | MS.gene97525:CDS |
| GAGTCTGCAGAACATATTGA+TGG | 0.441671 | 7.2:+74359332 | None:intergenic |
| TCATTTGTAGCAGGAACTTG+TGG | 0.446523 | 7.2:+74360114 | None:intergenic |
| ATAATTGCTAATCGGTTTAG+TGG | 0.448242 | 7.2:+74357939 | None:intergenic |
| TTGGCTTGTTAGTTACCAAA+TGG | 0.451486 | 7.2:-74359672 | MS.gene97525:CDS |
| ATCAAGTGAATTAGAGATTG+TGG | 0.457488 | 7.2:+74359105 | None:intergenic |
| CTAAAAGGGTCTCATCAATA+GGG | 0.461269 | 7.2:+74360016 | None:intergenic |
| CTGTATCTGCCTGGGCCAGT+AGG | 0.461653 | 7.2:+74358535 | None:intergenic |
| CTTGAAGCTTAACAATGAAA+AGG | 0.463463 | 7.2:-74357986 | MS.gene97525:CDS |
| GGCGATCGATGTGTTGTAGA+TGG | 0.464642 | 7.2:-74358126 | MS.gene97525:CDS |
| GGTAGAAAGTATAGAGTTCT+CGG | 0.466694 | 7.2:-74357899 | MS.gene97525:CDS |
| GTGTGTCGTGGGTATCTTGT+TGG | 0.466820 | 7.2:-74359782 | MS.gene97525:CDS |
| CAGAGAGGAATCCACAATAC+TGG | 0.467099 | 7.2:-74357710 | MS.gene97525:CDS |
| CAGATACAGCCTTCTTCCAC+AGG | 0.477668 | 7.2:-74357523 | MS.gene97525:CDS |
| ATGGAAGAGGATGGGAAAAT+CGG | 0.482591 | 7.2:-74359292 | MS.gene97525:CDS |
| AGTAACATTCTCTTCTAAAA+GGG | 0.484065 | 7.2:+74360002 | None:intergenic |
| CTCTTCCATTAGTGGAGGCC+CGG | 0.484425 | 7.2:+74359306 | None:intergenic |
| GCATAAGAGACTAGCGACTA+AGG | 0.484574 | 7.2:-74359830 | MS.gene97525:CDS |
| CAATTAAACAAGGTTGTGAC+AGG | 0.487725 | 7.2:-74358324 | MS.gene97525:CDS |
| CATGACCAAGATCATGATCA+TGG | 0.492732 | 7.2:-74360240 | MS.gene97525:CDS |
| ACTGTGCTTCTCCTGAGATA+AGG | 0.493811 | 7.2:-74360161 | MS.gene97525:CDS |
| GAGGTGGGGTATGCTTGTGA+TGG | 0.494249 | 7.2:-74359704 | MS.gene97525:CDS |
| CTTCCTTAATCATGAATCTA+CGG | 0.496022 | 7.2:+74358577 | None:intergenic |
| AGTCGCTAGTCTCTTATGCT+GGG | 0.498583 | 7.2:+74359834 | None:intergenic |
| TTGCGGCTAATTTAGATCGC+TGG | 0.498595 | 7.2:+74359497 | None:intergenic |
| ATCGGCAGATCTCAAAGTAT+TGG | 0.503428 | 7.2:-74359274 | MS.gene97525:CDS |
| TCCAGGTTCTTCTTCTGGTG+AGG | 0.503770 | 7.2:-74359899 | MS.gene97525:CDS |
| CATCGATCGCCAACATCGAA+TGG | 0.504479 | 7.2:+74358138 | None:intergenic |
| AGTTTGGGGAGAAGCTGAAT+CGG | 0.505424 | 7.2:-74357596 | MS.gene97525:CDS |
| AATGTAAGTAAGATTAAGAT+GGG | 0.505449 | 7.2:-74357651 | MS.gene97525:CDS |
| AAATGTAAGTAAGATTAAGA+TGG | 0.506785 | 7.2:-74357652 | MS.gene97525:CDS |
| TTCATGTTTGTGTGTGTCGT+GGG | 0.518234 | 7.2:-74359793 | MS.gene97525:CDS |
| CTTGGGGTGAACCTTATCTC+AGG | 0.520160 | 7.2:+74360150 | None:intergenic |
| CATTACAAACACAAAGATGA+TGG | 0.521560 | 7.2:+74358164 | None:intergenic |
| CTATATTCTTACTTGCAACA+AGG | 0.521854 | 7.2:+74358977 | None:intergenic |
| TGGGTTGAAGCAATGTGTCC+AGG | 0.522262 | 7.2:-74359578 | MS.gene97525:CDS |
| TGTATTCTAAGCCCAAATCA+AGG | 0.522553 | 7.2:-74360056 | MS.gene97525:CDS |
| TCATCACAGCTAGTACTAGC+GGG | 0.526862 | 7.2:-74358225 | MS.gene97525:CDS |
| AAATTAGGATGCCAGTATTG+TGG | 0.533187 | 7.2:+74357699 | None:intergenic |
| TGATAAATAGTACCCATGTA+AGG | 0.534123 | 7.2:+74359530 | None:intergenic |
| TCGGAGAAGTGAACTAGTGA+TGG | 0.536390 | 7.2:-74357577 | MS.gene97525:CDS |
| CCATCCTCTTCCATTAGTGG+AGG | 0.537252 | 7.2:+74359301 | None:intergenic |
| TCCTCACCAGAAGAAGAACC+TGG | 0.538196 | 7.2:+74359898 | None:intergenic |
| CGGGCCTCCACTAATGGAAG+AGG | 0.539056 | 7.2:-74359305 | MS.gene97525:CDS |
| ACACCTTTAATGGCATCTCC+AGG | 0.542913 | 7.2:-74359916 | MS.gene97525:CDS |
| TGTATCTGCCTGGGCCAGTA+GGG | 0.543733 | 7.2:+74358536 | None:intergenic |
| TAAAGCAATTACTAATGAGA+TGG | 0.545783 | 7.2:-74359047 | MS.gene97525:CDS |
| GATGAACACCCTGTGGAAGA+AGG | 0.550548 | 7.2:+74357514 | None:intergenic |
| AACTGATCCAAATGAAAACC+TGG | 0.550631 | 7.2:+74359560 | None:intergenic |
| GTTCATGTTTGTGTGTGTCG+TGG | 0.551999 | 7.2:-74359794 | MS.gene97525:CDS |
| GGACACATTGCTTCAACCCA+TGG | 0.552760 | 7.2:+74359581 | None:intergenic |
| AATTAGCCCTGTATCTGCCT+GGG | 0.553573 | 7.2:+74358527 | None:intergenic |
| ATGTTCTGCAGACTCTCTCC+GGG | 0.553700 | 7.2:-74359324 | MS.gene97525:CDS |
| GCCAGTAGGGAAAATACAAA+AGG | 0.553711 | 7.2:+74358549 | None:intergenic |
| CAGTTTGGTTCTCCTTACAT+GGG | 0.553964 | 7.2:-74359542 | MS.gene97525:CDS |
| TGCTAATCGGTTTAGTGGCG+AGG | 0.555030 | 7.2:+74357944 | None:intergenic |
| CTGGCATCCTAATTTCAGCT+TGG | 0.555043 | 7.2:-74357691 | MS.gene97525:CDS |
| GTTGGCTAGCTTAACAGTTG+AGG | 0.556372 | 7.2:-74359764 | MS.gene97525:CDS |
| ATTTGTAGCAGGAACTTGTG+GGG | 0.558637 | 7.2:+74360116 | None:intergenic |
| TAAAGGTGGCACAGAGAAAG+AGG | 0.562858 | 7.2:-74359224 | MS.gene97525:CDS |
| GTAATGCATCCATTCGATGT+TGG | 0.562974 | 7.2:-74358147 | MS.gene97525:CDS |
| CCTCCACTAATGGAAGAGGA+TGG | 0.567888 | 7.2:-74359301 | MS.gene97525:CDS |
| TATATTCTTACTTGCAACAA+GGG | 0.569030 | 7.2:+74358978 | None:intergenic |
| TAGATGCAGTGATGAATTCA+AGG | 0.569731 | 7.2:-74359132 | MS.gene97525:CDS |
| CATGATCATGATCTTGGTCA+TGG | 0.572577 | 7.2:+74360241 | None:intergenic |
| CTCCACTAATGGAAGAGGAT+GGG | 0.574488 | 7.2:-74359300 | MS.gene97525:CDS |
| TTTGTAGCAGGAACTTGTGG+GGG | 0.574718 | 7.2:+74360117 | None:intergenic |
| AGGTGGTGAAGTAAACATGA+TGG | 0.584745 | 7.2:-74360316 | MS.gene97525:CDS |
| TTATCAAGAATGTAAAGCAC+TGG | 0.590796 | 7.2:-74358382 | MS.gene97525:CDS |
| GGAGAAGAAAAGAGAAGTCG+TGG | 0.591078 | 7.2:-74360295 | MS.gene97525:CDS |
| TGCTTAGGTTGATGAATGGA+TGG | 0.602228 | 7.2:-74360354 | None:intergenic |
| GATCAAAGAAAGATTTGACA+TGG | 0.605754 | 7.2:+74359374 | None:intergenic |
| GGTTTCTGAATGATGTAACA+TGG | 0.606401 | 7.2:-74359474 | MS.gene97525:CDS |
| AAAGTCTTTAGCAGATTGGG+TGG | 0.609117 | 7.2:-74358499 | MS.gene97525:intron |
| CTCATCACAGCTAGTACTAG+CGG | 0.611663 | 7.2:-74358226 | MS.gene97525:CDS |
| ATGACCAAGATCATGATCAT+GGG | 0.612435 | 7.2:-74360239 | MS.gene97525:CDS |
| AGCGATCTAAATTAGCCGCA+AGG | 0.612871 | 7.2:-74359495 | MS.gene97525:CDS |
| CGTGGTGGCAATTTCAAGTG+TGG | 0.617011 | 7.2:-74360277 | MS.gene97525:CDS |
| TACATCATTCAGAAACCTTG+CGG | 0.619295 | 7.2:+74359480 | None:intergenic |
| CTAGTACTAGCTGTGATGAG+AGG | 0.620783 | 7.2:+74358229 | None:intergenic |
| GGGAGTTCAACTGTTAAAGG+TGG | 0.622194 | 7.2:-74359238 | MS.gene97525:CDS |
| GGTACTATTTATCAATCATG+AGG | 0.633489 | 7.2:-74359521 | MS.gene97525:CDS |
| TGTGACAGGGGTCTTAGTAG+TGG | 0.640665 | 7.2:-74358310 | MS.gene97525:CDS |
| ATTAAACAAGGTTGTGACAG+GGG | 0.642687 | 7.2:-74358322 | MS.gene97525:CDS |
| ATATTCTTACTTGCAACAAG+GGG | 0.645688 | 7.2:+74358979 | None:intergenic |
| AGCTGTTAAACAATTAAACA+AGG | 0.650076 | 7.2:-74358334 | MS.gene97525:CDS |
| TAACAGTTGAGGAACTGAGA+AGG | 0.650762 | 7.2:-74359753 | MS.gene97525:CDS |
| GTGGTGGCAATTTCAAGTGT+GGG | 0.651168 | 7.2:-74360276 | MS.gene97525:CDS |
| TACTGGCCCAGGCAGATACA+GGG | 0.658380 | 7.2:-74358533 | MS.gene97525:CDS |
| AATGAACTTTCAAGAGTTTG+GGG | 0.659127 | 7.2:-74357610 | MS.gene97525:CDS |
| AATTAAACAAGGTTGTGACA+GGG | 0.665376 | 7.2:-74358323 | MS.gene97525:CDS |
| TAGTGGTAAGCATAGTAGTG+TGG | 0.668127 | 7.2:-74358293 | MS.gene97525:CDS |
| ATGTGTTGTAGATGGTGTTG+AGG | 0.674889 | 7.2:-74358118 | MS.gene97525:intron |
| AGATACAGCCTTCTTCCACA+GGG | 0.677647 | 7.2:-74357522 | MS.gene97525:CDS |
| AAACAAATAGGTACGCAGAG+AGG | 0.683333 | 7.2:-74357725 | MS.gene97525:intron |
| CATCACAGCTAGTACTAGCG+GGG | 0.699530 | 7.2:-74358224 | MS.gene97525:CDS |
| CAAAATCTTCATGGTCCACG+CGG | 0.704397 | 7.2:+74359156 | None:intergenic |
| GATGGTAACAATAAGCAACA+AGG | 0.706956 | 7.2:-74360336 | MS.gene97525:CDS |
| AGCAAGAGAAAGTCTCCGCG+TGG | 0.714276 | 7.2:-74359171 | MS.gene97525:CDS |
| GAAGAAAAGAGAAGTCGTGG+TGG | 0.739654 | 7.2:-74360292 | MS.gene97525:CDS |
| TATCTGAGATGAACACCCTG+TGG | 0.746948 | 7.2:+74357507 | None:intergenic |
| GGTAACAATAAGCAACAAGG+TGG | 0.752941 | 7.2:-74360333 | MS.gene97525:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAACACTAAAAATAAATT+TGG | + | chr7.2:74359736-74359755 | None:intergenic | 15.0% |
| !!! | ATAGAATGCATTATTTTTTT+GGG | - | chr7.2:74358857-74358876 | MS.gene97525:intron | 15.0% |
| !!! | GTTTTGTTTAAAAAACAAAT+AGG | - | chr7.2:74360078-74360097 | MS.gene97525:CDS | 15.0% |
| !!! | TATAGAATGCATTATTTTTT+TGG | - | chr7.2:74358856-74358875 | MS.gene97525:intron | 15.0% |
| !! | AAATGTAAGTAAGATTAAGA+TGG | - | chr7.2:74360163-74360182 | MS.gene97525:CDS | 20.0% |
| !! | AACATTCTTGAAAACATAAT+AGG | + | chr7.2:74358809-74358828 | None:intergenic | 20.0% |
| !! | AATGTAAGTAAGATTAAGAT+GGG | - | chr7.2:74360164-74360183 | MS.gene97525:CDS | 20.0% |
| !! | TATTAATGCATTGAATTATC+TGG | - | chr7.2:74359765-74359784 | MS.gene97525:CDS | 20.0% |
| !! | TCAAATAAGTCAATGTAAAT+AGG | + | chr7.2:74358938-74358957 | None:intergenic | 20.0% |
| !!! | ACAGAGAAATTTTAAGATTA+AGG | + | chr7.2:74360042-74360061 | None:intergenic | 20.0% |
| !!! | ACTAATTTGTATATCCAAAT+TGG | - | chr7.2:74359116-74359135 | MS.gene97525:CDS | 20.0% |
| !!! | CTAATTTGTATATCCAAATT+GGG | - | chr7.2:74359117-74359136 | MS.gene97525:CDS | 20.0% |
| !!! | TAGAATGCATTATTTTTTTG+GGG | - | chr7.2:74358858-74358877 | MS.gene97525:intron | 20.0% |
| ! | AAGTAACATTCTCTTCTAAA+AGG | + | chr7.2:74357817-74357836 | None:intergenic | 25.0% |
| ! | AGCTGTTAAACAATTAAACA+AGG | - | chr7.2:74359481-74359500 | MS.gene97525:CDS | 25.0% |
| ! | AGTTATCATCATCATAATGA+AGG | - | chr7.2:74359362-74359381 | MS.gene97525:CDS | 25.0% |
| ! | CTATACTTTCTACCATATTT+GGG | + | chr7.2:74359910-74359929 | None:intergenic | 25.0% |
| ! | CTTCTGTAATAATTGCTAAT+CGG | + | chr7.2:74359887-74359906 | None:intergenic | 25.0% |
| ! | TAAAGCAATTACTAATGAGA+TGG | - | chr7.2:74358768-74358787 | MS.gene97525:intron | 25.0% |
| ! | TAGCTAATGAAAACAACTTA+TGG | - | chr7.2:74359039-74359058 | MS.gene97525:CDS | 25.0% |
| ! | TATATTCTTACTTGCAACAA+GGG | + | chr7.2:74358840-74358859 | None:intergenic | 25.0% |
| ! | TCTATACTTTCTACCATATT+TGG | + | chr7.2:74359911-74359930 | None:intergenic | 25.0% |
| !! | AGTAACATTCTCTTCTAAAA+GGG | + | chr7.2:74357816-74357835 | None:intergenic | 25.0% |
| !! | GAACTTTTTGTTGAAGAAAA+AGG | - | chr7.2:74358198-74358217 | MS.gene97525:CDS | 25.0% |
| !!! | AGAGTTATTGTTGCTTTTAA+GGG | - | chr7.2:74358912-74358931 | MS.gene97525:intron | 25.0% |
| !!! | ATAAGTTGTTTTCATTAGCT+AGG | + | chr7.2:74359040-74359059 | None:intergenic | 25.0% |
| !!! | CTGAAGTTTTATCACAAATT+TGG | - | chr7.2:74360002-74360021 | MS.gene97525:CDS | 25.0% |
| !!! | TAGAGTTATTGTTGCTTTTA+AGG | - | chr7.2:74358911-74358930 | MS.gene97525:intron | 25.0% |
| !!! | TGTTTGTATTTTTCAGTTGA+AGG | - | chr7.2:74359409-74359428 | MS.gene97525:CDS | 25.0% |
| AACTGAGAAGGATACATATT+TGG | - | chr7.2:74358074-74358093 | MS.gene97525:intron | 30.0% | |
| AAGAGTGGTATATCAAAACA+AGG | + | chr7.2:74359164-74359183 | None:intergenic | 30.0% | |
| AATGAACTTTCAAGAGTTTG+GGG | - | chr7.2:74360205-74360224 | MS.gene97525:CDS | 30.0% | |
| AATGTCCCTATTCATAAAGA+GGG | + | chr7.2:74359204-74359223 | None:intergenic | 30.0% | |
| AATTAAACAAGGTTGTGACA+GGG | - | chr7.2:74359492-74359511 | MS.gene97525:CDS | 30.0% | |
| ACAAACATTATAGTCGAAAC+AGG | + | chr7.2:74359396-74359415 | None:intergenic | 30.0% | |
| ACAATGAACTTTCAAGAGTT+TGG | - | chr7.2:74360203-74360222 | MS.gene97525:CDS | 30.0% | |
| AGAGAAAGAGGTTATTGATA+TGG | - | chr7.2:74358603-74358622 | MS.gene97525:intron | 30.0% | |
| ATATACATTTAGGCCCAATT+TGG | + | chr7.2:74359133-74359152 | None:intergenic | 30.0% | |
| ATATTCTTACTTGCAACAAG+GGG | + | chr7.2:74358839-74358858 | None:intergenic | 30.0% | |
| ATCAAGTGAATTAGAGATTG+TGG | + | chr7.2:74358713-74358732 | None:intergenic | 30.0% | |
| ATCCTGACGAAATCATTTAT+AGG | - | chr7.2:74357939-74357958 | MS.gene97525:CDS | 30.0% | |
| ATTACTACCAAGCTGAAATT+AGG | + | chr7.2:74360134-74360153 | None:intergenic | 30.0% | |
| CAAAAAGTCTTTAGCAGATT+GGG | - | chr7.2:74359313-74359332 | MS.gene97525:CDS | 30.0% | |
| CAATGAACTTTCAAGAGTTT+GGG | - | chr7.2:74360204-74360223 | MS.gene97525:CDS | 30.0% | |
| CACTGAAAGAAAAAATAACG+AGG | - | chr7.2:74359972-74359991 | MS.gene97525:CDS | 30.0% | |
| CATTACAAACACAAAGATGA+TGG | + | chr7.2:74359654-74359673 | None:intergenic | 30.0% | |
| CTATATTCTTACTTGCAACA+AGG | + | chr7.2:74358841-74358860 | None:intergenic | 30.0% | |
| CTTCCTTAATCATGAATCTA+CGG | + | chr7.2:74359241-74359260 | None:intergenic | 30.0% | |
| CTTGAAGCTTAACAATGAAA+AGG | - | chr7.2:74359829-74359848 | MS.gene97525:CDS | 30.0% | |
| GATCAAAGAAAGATTTGACA+TGG | + | chr7.2:74358444-74358463 | None:intergenic | 30.0% | |
| GATGTAAAAAATGAACGAAC+TGG | - | chr7.2:74358745-74358764 | MS.gene97525:intron | 30.0% | |
| GGTACTATTTATCAATCATG+AGG | - | chr7.2:74358294-74358313 | MS.gene97525:CDS | 30.0% | |
| TGATAAATAGTACCCATGTA+AGG | + | chr7.2:74358288-74358307 | None:intergenic | 30.0% | |
| TGTTCTACAAACCTTGATTT+GGG | + | chr7.2:74357773-74357792 | None:intergenic | 30.0% | |
| TTATCAAGAATGTAAAGCAC+TGG | - | chr7.2:74359433-74359452 | MS.gene97525:CDS | 30.0% | |
| TTATTACAGAAGCCCAAATA+TGG | - | chr7.2:74359895-74359914 | MS.gene97525:CDS | 30.0% | |
| TTGTTCTACAAACCTTGATT+TGG | + | chr7.2:74357774-74357793 | None:intergenic | 30.0% | |
| ! | AGGATACATATTTGGAGTTT+AGG | - | chr7.2:74358082-74358101 | MS.gene97525:intron | 30.0% |
| ! | ATAATTGCTAATCGGTTTAG+TGG | + | chr7.2:74359879-74359898 | None:intergenic | 30.0% |
| ! | GGATACATATTTGGAGTTTA+GGG | - | chr7.2:74358083-74358102 | MS.gene97525:intron | 30.0% |
| !!! | AGTATTGGCCATTTTAGTTT+CGG | - | chr7.2:74358556-74358575 | MS.gene97525:CDS | 30.0% |
| AAATTAGGATGCCAGTATTG+TGG | + | chr7.2:74360119-74360138 | None:intergenic | 35.0% | |
| AACAATGTGCATGAACCATT+TGG | + | chr7.2:74358161-74358180 | None:intergenic | 35.0% | |
| AACTGATCCAAATGAAAACC+TGG | + | chr7.2:74358258-74358277 | None:intergenic | 35.0% | |
| AATGTGCCCTCTTTATGAAT+AGG | - | chr7.2:74359195-74359214 | MS.gene97525:CDS | 35.0% | |
| ACAAAAATGCTCCAATGAGA+AGG | + | chr7.2:74358378-74358397 | None:intergenic | 35.0% | |
| ACTCCGTAGATTCATGATTA+AGG | - | chr7.2:74359235-74359254 | MS.gene97525:CDS | 35.0% | |
| ATGACCAAGATCATGATCAT+GGG | - | chr7.2:74357576-74357595 | MS.gene97525:CDS | 35.0% | |
| ATGTGCCCTCTTTATGAATA+GGG | - | chr7.2:74359196-74359215 | MS.gene97525:CDS | 35.0% | |
| ATTAAACAAGGTTGTGACAG+GGG | - | chr7.2:74359493-74359512 | MS.gene97525:CDS | 35.0% | |
| CAAAAATGCTCCAATGAGAA+GGG | + | chr7.2:74358377-74358396 | None:intergenic | 35.0% | |
| CAATGTCCCTATTCATAAAG+AGG | + | chr7.2:74359205-74359224 | None:intergenic | 35.0% | |
| CAATTAAACAAGGTTGTGAC+AGG | - | chr7.2:74359491-74359510 | MS.gene97525:CDS | 35.0% | |
| CATTTGAGAGAACTTGTATC+AGG | + | chr7.2:74360341-74360360 | None:intergenic | 35.0% | |
| CCAAAAAGTCTTTAGCAGAT+TGG | - | chr7.2:74359312-74359331 | MS.gene97525:CDS | 35.0% | |
| CTAAAAGGGTCTCATCAATA+GGG | + | chr7.2:74357802-74357821 | None:intergenic | 35.0% | |
| GATGGTAACAATAAGCAACA+AGG | - | chr7.2:74357479-74357498 | MS.gene97525:CDS | 35.0% | |
| GCTTAGAATACACTGATCTT+AGG | + | chr7.2:74357751-74357770 | None:intergenic | 35.0% | |
| GGTGAATAAGAGTTCCTATA+AGG | + | chr7.2:74357875-74357894 | None:intergenic | 35.0% | |
| GGTTTCTGAATGATGTAACA+TGG | - | chr7.2:74358341-74358360 | MS.gene97525:CDS | 35.0% | |
| TACATCATTCAGAAACCTTG+CGG | + | chr7.2:74358338-74358357 | None:intergenic | 35.0% | |
| TAGATGCAGTGATGAATTCA+AGG | - | chr7.2:74358683-74358702 | MS.gene97525:intron | 35.0% | |
| TCTAAAAGGGTCTCATCAAT+AGG | + | chr7.2:74357803-74357822 | None:intergenic | 35.0% | |
| TGCATCTACCAAAATCTTCA+TGG | + | chr7.2:74358671-74358690 | None:intergenic | 35.0% | |
| TGCCTATAAATGATTTCGTC+AGG | + | chr7.2:74357944-74357963 | None:intergenic | 35.0% | |
| TGTATTCTAAGCCCAAATCA+AGG | - | chr7.2:74357759-74357778 | MS.gene97525:intron | 35.0% | |
| TTCACCTAGAACACCTTTAA+TGG | - | chr7.2:74357889-74357908 | MS.gene97525:CDS | 35.0% | |
| TTGAACTCCCGAAACTAAAA+TGG | + | chr7.2:74358567-74358586 | None:intergenic | 35.0% | |
| TTGAATTATCTGGCAGCTAT+TGG | - | chr7.2:74359775-74359794 | MS.gene97525:CDS | 35.0% | |
| ! | AATGTGTCCAGGTTTTCATT+TGG | - | chr7.2:74358248-74358267 | MS.gene97525:CDS | 35.0% |
| ! | ATATTTGGAGTTTAGGGCTT+TGG | - | chr7.2:74358089-74358108 | MS.gene97525:intron | 35.0% |
| ! | CCAATCTGCTAAAGACTTTT+TGG | + | chr7.2:74359315-74359334 | None:intergenic | 35.0% |
| ! | GACACTGTTGCTATCAATTT+TGG | - | chr7.2:74358408-74358427 | MS.gene97525:intron | 35.0% |
| ! | GGAGAAGTGCATATACATTT+AGG | + | chr7.2:74359143-74359162 | None:intergenic | 35.0% |
| ! | GGTAGAAAGTATAGAGTTCT+CGG | - | chr7.2:74359916-74359935 | MS.gene97525:CDS | 35.0% |
| ! | GGTTTTCATTTGGATCAGTT+TGG | - | chr7.2:74358258-74358277 | MS.gene97525:CDS | 35.0% |
| ! | GTAAGGTTTTCATTTGTAGC+AGG | + | chr7.2:74357713-74357732 | None:intergenic | 35.0% |
| ! | TCCTTTTGTATTTTCCCTAC+TGG | - | chr7.2:74359265-74359284 | MS.gene97525:CDS | 35.0% |
| !! | CATTTTAGCAACAACAAGAG+TGG | + | chr7.2:74359179-74359198 | None:intergenic | 35.0% |
| !! | TCTCATTGGAGCATTTTTGT+GGG | - | chr7.2:74358378-74358397 | MS.gene97525:CDS | 35.0% |
| !! | TTCTCATTGGAGCATTTTTG+TGG | - | chr7.2:74358377-74358396 | MS.gene97525:CDS | 35.0% |
| !! | TTGGCTTGTTAGTTACCAAA+TGG | - | chr7.2:74358143-74358162 | MS.gene97525:CDS | 35.0% |
| !!! | AAGGTGCTTTATTTTGTCCA+TGG | - | chr7.2:74358217-74358236 | MS.gene97525:CDS | 35.0% |
| !!! | AGGTGCTTTATTTTGTCCAT+GGG | - | chr7.2:74358218-74358237 | MS.gene97525:CDS | 35.0% |
| !!! | CTTGTGATGGTGACATTTTT+TGG | - | chr7.2:74358124-74358143 | MS.gene97525:CDS | 35.0% |
| !!! | GTATTGGCCATTTTAGTTTC+GGG | - | chr7.2:74358557-74358576 | MS.gene97525:CDS | 35.0% |
| AAACAAATAGGTACGCAGAG+AGG | - | chr7.2:74360090-74360109 | MS.gene97525:CDS | 40.0% | |
| AAAGTCTTTAGCAGATTGGG+TGG | - | chr7.2:74359316-74359335 | MS.gene97525:CDS | 40.0% | |
| AGGTGGTGAAGTAAACATGA+TGG | - | chr7.2:74357499-74357518 | MS.gene97525:CDS | 40.0% | |
| AGTAGTGTGGCTTCTTCTAA+TGG | - | chr7.2:74359535-74359554 | MS.gene97525:CDS | 40.0% | |
| ATCGGCAGATCTCAAAGTAT+TGG | - | chr7.2:74358541-74358560 | MS.gene97525:CDS | 40.0% | |
| ATGACACCAGCAGAGAAAAT+TGG | - | chr7.2:74359947-74359966 | MS.gene97525:CDS | 40.0% | |
| ATGGAAGAGGATGGGAAAAT+CGG | - | chr7.2:74358523-74358542 | MS.gene97525:CDS | 40.0% | |
| ATTTGTAGCAGGAACTTGTG+GGG | + | chr7.2:74357702-74357721 | None:intergenic | 40.0% | |
| CATGACCAAGATCATGATCA+TGG | - | chr7.2:74357575-74357594 | MS.gene97525:CDS | 40.0% | |
| CATGATCATGATCTTGGTCA+TGG | + | chr7.2:74357577-74357596 | None:intergenic | 40.0% | |
| CATTTGTAGCAGGAACTTGT+GGG | + | chr7.2:74357703-74357722 | None:intergenic | 40.0% | |
| GAGTCTGCAGAACATATTGA+TGG | + | chr7.2:74358486-74358505 | None:intergenic | 40.0% | |
| GCCAGTAGGGAAAATACAAA+AGG | + | chr7.2:74359269-74359288 | None:intergenic | 40.0% | |
| GGTAACAATAAGCAACAAGG+TGG | - | chr7.2:74357482-74357501 | MS.gene97525:CDS | 40.0% | |
| GTAATGCATCCATTCGATGT+TGG | - | chr7.2:74359668-74359687 | MS.gene97525:CDS | 40.0% | |
| TAACAGTTGAGGAACTGAGA+AGG | - | chr7.2:74358062-74358081 | MS.gene97525:intron | 40.0% | |
| TAGTGGTAAGCATAGTAGTG+TGG | - | chr7.2:74359522-74359541 | MS.gene97525:CDS | 40.0% | |
| TCAACCCATGATCATGATCT+TGG | + | chr7.2:74357583-74357602 | None:intergenic | 40.0% | |
| TCATTTGTAGCAGGAACTTG+TGG | + | chr7.2:74357704-74357723 | None:intergenic | 40.0% | |
| TTCATGTTTGTGTGTGTCGT+GGG | - | chr7.2:74358022-74358041 | MS.gene97525:CDS | 40.0% | |
| TTCGGGAGTTCAACTGTTAA+AGG | - | chr7.2:74358574-74358593 | MS.gene97525:CDS | 40.0% | |
| TTTCCATTTGCTCTAGCAGT+CGG | + | chr7.2:74358991-74359010 | None:intergenic | 40.0% | |
| ! | ACTCTTGTTTCCCTTCTCAT+TGG | - | chr7.2:74358364-74358383 | MS.gene97525:CDS | 40.0% |
| ! | ATGTGTTGTAGATGGTGTTG+AGG | - | chr7.2:74359697-74359716 | MS.gene97525:CDS | 40.0% |
| ! | CAGCTGTTACTTCACCTTAT+AGG | - | chr7.2:74357858-74357877 | MS.gene97525:CDS | 40.0% |
| ! | TCTTAGGAGAGTTTTTCTCG+CGG | + | chr7.2:74357735-74357754 | None:intergenic | 40.0% |
| !! | CAGTTTGGTTCTCCTTACAT+GGG | - | chr7.2:74358273-74358292 | MS.gene97525:CDS | 40.0% |
| !! | GATGCCATTAAAGGTGTTCT+AGG | + | chr7.2:74357896-74357915 | None:intergenic | 40.0% |
| !! | TCAGTTTGGTTCTCCTTACA+TGG | - | chr7.2:74358272-74358291 | MS.gene97525:CDS | 40.0% |
| AATTAGCCCTGTATCTGCCT+GGG | + | chr7.2:74359291-74359310 | None:intergenic | 45.0% | |
| ACACCTTTAATGGCATCTCC+AGG | - | chr7.2:74357899-74357918 | MS.gene97525:CDS | 45.0% | |
| ACTGTGCTTCTCCTGAGATA+AGG | - | chr7.2:74357654-74357673 | MS.gene97525:CDS | 45.0% | |
| AGATACAGCCTTCTTCCACA+GGG | - | chr7.2:74360293-74360312 | MS.gene97525:CDS | 45.0% | |
| AGCGATCTAAATTAGCCGCA+AGG | - | chr7.2:74358320-74358339 | MS.gene97525:CDS | 45.0% | |
| AGTTTGGGGAGAAGCTGAAT+CGG | - | chr7.2:74360219-74360238 | MS.gene97525:CDS | 45.0% | |
| CAAAATCTTCATGGTCCACG+CGG | + | chr7.2:74358662-74358681 | None:intergenic | 45.0% | |
| CAGAGAGGAATCCACAATAC+TGG | - | chr7.2:74360105-74360124 | MS.gene97525:CDS | 45.0% | |
| CTAGTACTAGCTGTGATGAG+AGG | + | chr7.2:74359589-74359608 | None:intergenic | 45.0% | |
| CTCATCACAGCTAGTACTAG+CGG | - | chr7.2:74359589-74359608 | MS.gene97525:CDS | 45.0% | |
| CTCCACTAATGGAAGAGGAT+GGG | - | chr7.2:74358515-74358534 | MS.gene97525:CDS | 45.0% | |
| CTGGCATCCTAATTTCAGCT+TGG | - | chr7.2:74360124-74360143 | MS.gene97525:CDS | 45.0% | |
| GAACCTGGAGATGCCATTAA+AGG | + | chr7.2:74357905-74357924 | None:intergenic | 45.0% | |
| GAAGAAAAGAGAAGTCGTGG+TGG | - | chr7.2:74357523-74357542 | MS.gene97525:CDS | 45.0% | |
| GCATAAGAGACTAGCGACTA+AGG | - | chr7.2:74357985-74358004 | MS.gene97525:CDS | 45.0% | |
| GGAGAAGAAAAGAGAAGTCG+TGG | - | chr7.2:74357520-74357539 | MS.gene97525:CDS | 45.0% | |
| GGGAGTTCAACTGTTAAAGG+TGG | - | chr7.2:74358577-74358596 | MS.gene97525:CDS | 45.0% | |
| GTTCATGTTTGTGTGTGTCG+TGG | - | chr7.2:74358021-74358040 | MS.gene97525:CDS | 45.0% | |
| TAAAGGTGGCACAGAGAAAG+AGG | - | chr7.2:74358591-74358610 | MS.gene97525:CDS | 45.0% | |
| TAATTAGCCCTGTATCTGCC+TGG | + | chr7.2:74359292-74359311 | None:intergenic | 45.0% | |
| TATGTTCTGCAGACTCTCTC+CGG | - | chr7.2:74358490-74358509 | MS.gene97525:intron | 45.0% | |
| TCATCACAGCTAGTACTAGC+GGG | - | chr7.2:74359590-74359609 | MS.gene97525:CDS | 45.0% | |
| TCGGAGAAGTGAACTAGTGA+TGG | - | chr7.2:74360238-74360257 | MS.gene97525:CDS | 45.0% | |
| TTAGTGGCGAGGACATAGTT+TGG | + | chr7.2:74359863-74359882 | None:intergenic | 45.0% | |
| TTCCCATCCTCTTCCATTAG+TGG | + | chr7.2:74358520-74358539 | None:intergenic | 45.0% | |
| TTGCGGCTAATTTAGATCGC+TGG | + | chr7.2:74358321-74358340 | None:intergenic | 45.0% | |
| TTTGTAGCAGGAACTTGTGG+GGG | + | chr7.2:74357701-74357720 | None:intergenic | 45.0% | |
| ! | AGTCGCTAGTCTCTTATGCT+GGG | + | chr7.2:74357984-74358003 | None:intergenic | 45.0% |
| ! | AGTGCTCCAATTTTCTCTGC+TGG | + | chr7.2:74359956-74359975 | None:intergenic | 45.0% |
| ! | GAACTTGTGGGGGTGTATTT+GGG | + | chr7.2:74357691-74357710 | None:intergenic | 45.0% |
| ! | GTGGTGGCAATTTCAAGTGT+GGG | - | chr7.2:74357539-74357558 | MS.gene97525:CDS | 45.0% |
| ! | TAGTCGCTAGTCTCTTATGC+TGG | + | chr7.2:74357985-74358004 | None:intergenic | 45.0% |
| ! | TATCTGAGATGAACACCCTG+TGG | + | chr7.2:74360311-74360330 | None:intergenic | 45.0% |
| ! | TTTGGAGTTTAGGGCTTTGG+AGG | - | chr7.2:74358092-74358111 | MS.gene97525:intron | 45.0% |
| !! | AGCTGTTTTCGTGTCGCATA+AGG | + | chr7.2:74359465-74359484 | None:intergenic | 45.0% |
| !! | GTTGGCTAGCTTAACAGTTG+AGG | - | chr7.2:74358051-74358070 | MS.gene97525:intron | 45.0% |
| AGACCGACTGCTAGAGCAAA+TGG | - | chr7.2:74358985-74359004 | MS.gene97525:intron | 50.0% | |
| ATGTTCTGCAGACTCTCTCC+GGG | - | chr7.2:74358491-74358510 | MS.gene97525:intron | 50.0% | |
| CAGATACAGCCTTCTTCCAC+AGG | - | chr7.2:74360292-74360311 | MS.gene97525:CDS | 50.0% | |
| CATCACAGCTAGTACTAGCG+GGG | - | chr7.2:74359591-74359610 | MS.gene97525:CDS | 50.0% | |
| CATCGATCGCCAACATCGAA+TGG | + | chr7.2:74359680-74359699 | None:intergenic | 50.0% | |
| CCATCCTCTTCCATTAGTGG+AGG | + | chr7.2:74358517-74358536 | None:intergenic | 50.0% | |
| CCTCCACTAATGGAAGAGGA+TGG | - | chr7.2:74358514-74358533 | MS.gene97525:CDS | 50.0% | |
| CTTGGGGTGAACCTTATCTC+AGG | + | chr7.2:74357668-74357687 | None:intergenic | 50.0% | |
| GATGAACACCCTGTGGAAGA+AGG | + | chr7.2:74360304-74360323 | None:intergenic | 50.0% | |
| GCATCTCCAGGTTCTTCTTC+TGG | - | chr7.2:74357911-74357930 | MS.gene97525:CDS | 50.0% | |
| GGACACATTGCTTCAACCCA+TGG | + | chr7.2:74358237-74358256 | None:intergenic | 50.0% | |
| GGCGATCGATGTGTTGTAGA+TGG | - | chr7.2:74359689-74359708 | MS.gene97525:CDS | 50.0% | |
| GTACTAGCGGGGTTCATGTT+TGG | - | chr7.2:74359602-74359621 | MS.gene97525:CDS | 50.0% | |
| GTGTGTCGTGGGTATCTTGT+TGG | - | chr7.2:74358033-74358052 | MS.gene97525:intron | 50.0% | |
| TCCAGGTTCTTCTTCTGGTG+AGG | - | chr7.2:74357916-74357935 | MS.gene97525:CDS | 50.0% | |
| TCCTCACCAGAAGAAGAACC+TGG | + | chr7.2:74357920-74357939 | None:intergenic | 50.0% | |
| TGTGACAGGGGTCTTAGTAG+TGG | - | chr7.2:74359505-74359524 | MS.gene97525:CDS | 50.0% | |
| ! | CGCGTGGACCATGAAGATTT+TGG | - | chr7.2:74358660-74358679 | MS.gene97525:intron | 50.0% |
| ! | CGTGGTGGCAATTTCAAGTG+TGG | - | chr7.2:74357538-74357557 | MS.gene97525:CDS | 50.0% |
| ! | GGAACTTGTGGGGGTGTATT+TGG | + | chr7.2:74357692-74357711 | None:intergenic | 50.0% |
| ! | GGAGAGTTTTTCTCGCGGTA+AGG | + | chr7.2:74357730-74357749 | None:intergenic | 50.0% |
| ! | TGCTAATCGGTTTAGTGGCG+AGG | + | chr7.2:74359874-74359893 | None:intergenic | 50.0% |
| ! | TGGGTTGAAGCAATGTGTCC+AGG | - | chr7.2:74358237-74358256 | MS.gene97525:CDS | 50.0% |
| ! | TGTATTTTCCCTACTGGCCC+AGG | - | chr7.2:74359271-74359290 | MS.gene97525:CDS | 50.0% |
| !! | AGTTTAGGGCTTTGGAGGTG+GGG | - | chr7.2:74358097-74358116 | MS.gene97525:intron | 50.0% |
| !! | GAGTTTAGGGCTTTGGAGGT+GGG | - | chr7.2:74358096-74358115 | MS.gene97525:intron | 50.0% |
| AGCAAGAGAAAGTCTCCGCG+TGG | - | chr7.2:74358644-74358663 | MS.gene97525:intron | 55.0% | |
| CTCTTCCATTAGTGGAGGCC+CGG | + | chr7.2:74358512-74358531 | None:intergenic | 55.0% | |
| GAGGTGGGGTATGCTTGTGA+TGG | - | chr7.2:74358111-74358130 | MS.gene97525:intron | 55.0% | |
| TACTGGCCCAGGCAGATACA+GGG | - | chr7.2:74359282-74359301 | MS.gene97525:CDS | 55.0% | |
| TGTATCTGCCTGGGCCAGTA+GGG | + | chr7.2:74359282-74359301 | None:intergenic | 55.0% | |
| ! | GTGGGGGTGTATTTGGGCTT+GGG | + | chr7.2:74357685-74357704 | None:intergenic | 55.0% |
| ! | TGGGGGTGTATTTGGGCTTG+GGG | + | chr7.2:74357684-74357703 | None:intergenic | 55.0% |
| ! | TGTGGGGGTGTATTTGGGCT+TGG | + | chr7.2:74357686-74357705 | None:intergenic | 55.0% |
| !! | GGAGTTTAGGGCTTTGGAGG+TGG | - | chr7.2:74358095-74358114 | MS.gene97525:intron | 55.0% |
| CGGGCCTCCACTAATGGAAG+AGG | - | chr7.2:74358510-74358529 | MS.gene97525:CDS | 60.0% | |
| CTACTGGCCCAGGCAGATAC+AGG | - | chr7.2:74359281-74359300 | MS.gene97525:CDS | 60.0% | |
| CTGTATCTGCCTGGGCCAGT+AGG | + | chr7.2:74359283-74359302 | None:intergenic | 60.0% | |
| TCTCTCCGGGCCTCCACTAA+TGG | - | chr7.2:74358504-74358523 | MS.gene97525:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 74357476 | 74360361 | 74357476 | ID=MS.gene97525 |
| chr7.2 | mRNA | 74357476 | 74360361 | 74357476 | ID=MS.gene97525.t1;Parent=MS.gene97525 |
| chr7.2 | exon | 74358989 | 74360361 | 74358989 | ID=MS.gene97525.t1.exon1;Parent=MS.gene97525.t1 |
| chr7.2 | CDS | 74358989 | 74360361 | 74358989 | ID=cds.MS.gene97525.t1;Parent=MS.gene97525.t1 |
| chr7.2 | exon | 74358500 | 74358620 | 74358500 | ID=MS.gene97525.t1.exon2;Parent=MS.gene97525.t1 |
| chr7.2 | CDS | 74358500 | 74358620 | 74358500 | ID=cds.MS.gene97525.t1;Parent=MS.gene97525.t1 |
| chr7.2 | exon | 74358119 | 74358412 | 74358119 | ID=MS.gene97525.t1.exon3;Parent=MS.gene97525.t1 |
| chr7.2 | CDS | 74358119 | 74358412 | 74358119 | ID=cds.MS.gene97525.t1;Parent=MS.gene97525.t1 |
| chr7.2 | exon | 74357844 | 74358046 | 74357844 | ID=MS.gene97525.t1.exon4;Parent=MS.gene97525.t1 |
| chr7.2 | CDS | 74357844 | 74358046 | 74357844 | ID=cds.MS.gene97525.t1;Parent=MS.gene97525.t1 |
| chr7.2 | exon | 74357476 | 74357737 | 74357476 | ID=MS.gene97525.t1.exon5;Parent=MS.gene97525.t1 |
| chr7.2 | CDS | 74357476 | 74357737 | 74357476 | ID=cds.MS.gene97525.t1;Parent=MS.gene97525.t1 |
| Gene Sequence |
| Protein sequence |
