Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74110.t1 | XP_003603195.2 | 94.4 | 750 | 41 | 1 | 1 | 750 | 1 | 749 | 0.00E+00 | 1365.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74110.t1 | Q9LYG9 | 54.8 | 690 | 292 | 9 | 63 | 739 | 48 | 730 | 2.7e-196 | 686.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74110.t1 | G7J8D9 | 94.4 | 750 | 41 | 1 | 1 | 750 | 1 | 749 | 0.0e+00 | 1365.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene74110 | MS.gene014981 | PPI |
| MS.gene42688 | MS.gene74110 | PPI |
| MS.gene42686 | MS.gene74110 | PPI |
| MS.gene32764 | MS.gene74110 | PPI |
| MS.gene014973 | MS.gene74110 | PPI |
| MS.gene062410 | MS.gene74110 | PPI |
| MS.gene42622 | MS.gene74110 | PPI |
| MS.gene014978 | MS.gene74110 | PPI |
| MS.gene32770 | MS.gene74110 | PPI |
| MS.gene42620 | MS.gene74110 | PPI |
| MS.gene74110 | MS.gene42628 | PPI |
| MS.gene32773 | MS.gene74110 | PPI |
| MS.gene97525 | MS.gene74110 | PPI |
| MS.gene42681 | MS.gene74110 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74110.t1 | MTR_3g104920 | 94.400 | 750 | 41 | 1 | 1 | 750 | 1 | 749 | 0.0 | 1435 |
| MS.gene74110.t1 | MTR_3g104920 | 94.573 | 737 | 40 | 0 | 14 | 750 | 1 | 737 | 0.0 | 1415 |
| MS.gene74110.t1 | MTR_3g104990 | 79.560 | 773 | 133 | 5 | 1 | 750 | 1 | 771 | 0.0 | 1205 |
| MS.gene74110.t1 | MTR_3g104940 | 77.907 | 774 | 145 | 3 | 1 | 750 | 1 | 772 | 0.0 | 1177 |
| MS.gene74110.t1 | MTR_2g041220 | 48.674 | 754 | 332 | 16 | 18 | 739 | 15 | 745 | 0.0 | 661 |
| MS.gene74110.t1 | MTR_8g071250 | 43.093 | 666 | 340 | 12 | 89 | 739 | 47 | 688 | 4.16e-164 | 491 |
| MS.gene74110.t1 | MTR_1g113850 | 39.258 | 647 | 335 | 10 | 153 | 748 | 276 | 915 | 6.01e-146 | 451 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74110.t1 | AT5G12080 | 56.812 | 690 | 278 | 9 | 63 | 739 | 48 | 730 | 0.0 | 785 |
| MS.gene74110.t1 | AT5G12080 | 56.812 | 690 | 278 | 9 | 63 | 739 | 48 | 730 | 0.0 | 785 |
| MS.gene74110.t1 | AT5G12080 | 56.812 | 690 | 278 | 9 | 63 | 739 | 48 | 730 | 0.0 | 785 |
| MS.gene74110.t1 | AT5G19520 | 51.659 | 693 | 317 | 8 | 59 | 739 | 52 | 738 | 0.0 | 707 |
| MS.gene74110.t1 | AT5G19520 | 51.659 | 693 | 317 | 8 | 59 | 739 | 52 | 738 | 0.0 | 707 |
| MS.gene74110.t1 | AT2G17010 | 38.226 | 654 | 364 | 8 | 122 | 740 | 240 | 888 | 4.22e-150 | 461 |
| MS.gene74110.t1 | AT3G14810 | 38.705 | 695 | 354 | 14 | 97 | 744 | 192 | 861 | 5.06e-145 | 447 |
| MS.gene74110.t1 | AT1G53470 | 39.389 | 622 | 324 | 9 | 170 | 746 | 251 | 864 | 3.75e-144 | 445 |
| MS.gene74110.t1 | AT1G78610 | 40.032 | 632 | 343 | 7 | 147 | 747 | 211 | 837 | 5.34e-144 | 444 |
| MS.gene74110.t1 | AT2G17000 | 39.384 | 617 | 333 | 9 | 164 | 748 | 222 | 829 | 4.02e-134 | 417 |
| MS.gene74110.t1 | AT2G17000 | 39.384 | 617 | 333 | 9 | 164 | 748 | 222 | 829 | 4.24e-134 | 417 |
| MS.gene74110.t1 | AT3G14810 | 36.259 | 695 | 336 | 15 | 97 | 744 | 192 | 826 | 6.39e-126 | 396 |
| MS.gene74110.t1 | AT2G17010 | 35.854 | 357 | 193 | 7 | 173 | 498 | 295 | 646 | 8.93e-62 | 220 |
Find 156 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTATACTTTCTACCATATT+TGG | 0.076614 | 7.4:+76166315 | None:intergenic |
| GACACTGTTGCTATCGATTT+TGG | 0.151071 | 7.4:-76167815 | MS.gene74110:CDS |
| TTCACCTAGAACACCTTTAA+TGG | 0.166704 | 7.4:-76168334 | MS.gene74110:CDS |
| GTATTGGCCGTTTCAGTTTC+GGG | 0.214411 | 7.4:-76167666 | MS.gene74110:CDS |
| AGGATACATATTTGGAGTTT+AGG | 0.218904 | 7.4:-76168141 | MS.gene74110:CDS |
| ACAATGAACTTTCAAGAGTT+TGG | 0.224035 | 7.4:-76166020 | MS.gene74110:CDS |
| CAGCTGTTACTTCACCTTAT+AGG | 0.232327 | 7.4:-76168365 | MS.gene74110:CDS |
| AAGTAACATTCTCTTCTAAA+AGG | 0.242883 | 7.4:+76168409 | None:intergenic |
| ATGACACCAGCAGAGAAAAT+TGG | 0.265311 | 7.4:-76166276 | MS.gene74110:CDS |
| GCATCTCCAGGTTCTTCTTC+TGG | 0.277547 | 7.4:-76168312 | MS.gene74110:CDS |
| GGATACATATTTGGAGTTTA+GGG | 0.285104 | 7.4:-76168140 | MS.gene74110:CDS |
| TTGTTCTACAAACCTTGATT+TGG | 0.285408 | 7.4:+76168452 | None:intergenic |
| CAATGAACTTTCAAGAGTTT+GGG | 0.286227 | 7.4:-76166019 | MS.gene74110:CDS |
| AACTGAGAAGGATACATATT+TGG | 0.299045 | 7.4:-76168149 | MS.gene74110:CDS |
| TTCGGGAGTTCAACTGTTAA+AGG | 0.302616 | 7.4:-76167649 | MS.gene74110:CDS |
| AGTATTGGCCGTTTCAGTTT+CGG | 0.310594 | 7.4:-76167667 | MS.gene74110:CDS |
| ATTACTACCAAGCTGAAATT+AGG | 0.311064 | 7.4:+76166092 | None:intergenic |
| GGAGTTTAGGGCTTTGGAGG+TGG | 0.320866 | 7.4:-76168128 | MS.gene74110:CDS |
| TCTAAAAGGGTCTCATCAAT+AGG | 0.325584 | 7.4:+76168423 | None:intergenic |
| CTATACTTTCTACCATATTT+GGG | 0.329682 | 7.4:+76166316 | None:intergenic |
| ATATTTGGAGTTTAGGGCTT+TGG | 0.330737 | 7.4:-76168134 | MS.gene74110:CDS |
| GAGTTTAGGGCTTTGGAGGT+GGG | 0.335496 | 7.4:-76168127 | MS.gene74110:CDS |
| CATTTGAGAGAACTTGTATC+AGG | 0.336074 | 7.4:+76165885 | None:intergenic |
| TCTCTCCGGGCCTCCACTAA+TGG | 0.338276 | 7.4:-76167719 | MS.gene74110:CDS |
| CTACTGGCCCAGGCAGATAC+AGG | 0.339554 | 7.4:-76166942 | MS.gene74110:CDS |
| ACTCCGTAGATTCATGATTA+AGG | 0.340419 | 7.4:-76166988 | MS.gene74110:CDS |
| ACTCTTGTTTCCCTTCTCAT+TGG | 0.349071 | 7.4:-76167859 | MS.gene74110:CDS |
| TTCCCATCCTCTTCCATTAG+TGG | 0.352581 | 7.4:+76167706 | None:intergenic |
| GTACTAGCGGGGTTCATGTT+TGG | 0.355463 | 7.4:-76166621 | MS.gene74110:CDS |
| GAACCTGGAGATGCCATTAA+AGG | 0.366672 | 7.4:+76168321 | None:intergenic |
| AACATTCTTGAAAACATAAT+AGG | 0.371862 | 7.4:+76167417 | None:intergenic |
| TGTTCTACAAACCTTGATTT+GGG | 0.374332 | 7.4:+76168453 | None:intergenic |
| GCTTAGAATACACTGATCTT+AGG | 0.375626 | 7.4:+76168475 | None:intergenic |
| CTGTATCTGCCTGGGCCAGT+AGG | 0.376769 | 7.4:+76166943 | None:intergenic |
| AGTAGTGTGGCTTCTTCTAA+TGG | 0.385108 | 7.4:-76166688 | MS.gene74110:CDS |
| TGCATCTACCAAAATCTTCA+TGG | 0.385620 | 7.4:+76167555 | None:intergenic |
| GCATAAGAGACTAGCGACTA+TGG | 0.390540 | 7.4:-76168238 | MS.gene74110:CDS |
| CTTTCAAGAGTTTGGGGAGA+AGG | 0.394006 | 7.4:-76166012 | MS.gene74110:CDS |
| TCAGTTTGGTTCTCCTTACA+TGG | 0.394428 | 7.4:-76167951 | MS.gene74110:CDS |
| GGTGAATAAGAGTTCCTATA+AGG | 0.395222 | 7.4:+76168351 | None:intergenic |
| TCAACCCATGATCATGATCT+TGG | 0.398144 | 7.4:+76168643 | None:intergenic |
| TTATTACAGAAGCCCAAATA+TGG | 0.398155 | 7.4:-76166328 | MS.gene74110:CDS |
| AGAGAAAGAGGTTATTGATA+TGG | 0.399291 | 7.4:-76167620 | MS.gene74110:CDS |
| TAGTCGCTAGTCTCTTATGC+TGG | 0.404449 | 7.4:+76168241 | None:intergenic |
| TAATTAGCCCTGTATCTGCC+TGG | 0.406972 | 7.4:+76166934 | None:intergenic |
| GATGCCATTAAAGGTGTTCT+AGG | 0.410220 | 7.4:+76168330 | None:intergenic |
| CATTTGTAGCAGGAACTTGT+GGG | 0.411786 | 7.4:+76168523 | None:intergenic |
| AGTTTAGGGCTTTGGAGGTG+GGG | 0.414583 | 7.4:-76168126 | MS.gene74110:CDS |
| ATCCTGACGAAATCATTTAT+AGG | 0.416707 | 7.4:-76168284 | MS.gene74110:CDS |
| CGCGTGGACCATGAAGATTT+TGG | 0.419825 | 7.4:-76167563 | MS.gene74110:CDS |
| TGTATCTGCCTGGGCCAGTA+GGG | 0.421172 | 7.4:+76166944 | None:intergenic |
| TGCCTATAAATGATTTCGTC+AGG | 0.429312 | 7.4:+76168282 | None:intergenic |
| AACAATGTGCATGAACCATT+TGG | 0.430283 | 7.4:+76168065 | None:intergenic |
| TTTGGAGTTTAGGGCTTTGG+AGG | 0.436552 | 7.4:-76168131 | MS.gene74110:CDS |
| GAATCTGCAGAACATATTGA+TGG | 0.442028 | 7.4:+76167740 | None:intergenic |
| ATAGTGGCGAGGACAGAGTT+TGG | 0.443127 | 7.4:+76166363 | None:intergenic |
| TCATTTGTAGCAGGAACTTG+TGG | 0.446523 | 7.4:+76168522 | None:intergenic |
| CTTCTGTAATAATTGCTAAT+CGG | 0.448193 | 7.4:+76166339 | None:intergenic |
| ATGGAAGAGGATGGGAAAAT+CGG | 0.449981 | 7.4:-76167700 | MS.gene74110:CDS |
| TTGGCTTGTTAGTTACCAAA+TGG | 0.451486 | 7.4:-76168080 | MS.gene74110:CDS |
| TATGTTCTGCAGATTCTCTC+CGG | 0.455609 | 7.4:-76167733 | MS.gene74110:CDS |
| CTTGAAGCTTAATAATGAAA+AGG | 0.456438 | 7.4:-76166394 | MS.gene74110:CDS |
| ATCAAGTGAATTAGAGATTG+TGG | 0.457488 | 7.4:+76167513 | None:intergenic |
| CTAAAAGGGTCTCATCAATA+GGG | 0.461269 | 7.4:+76168424 | None:intergenic |
| GGCGATCGATGTGTTGTAGA+TGG | 0.464642 | 7.4:-76166534 | MS.gene74110:CDS |
| GGTAGAAAGTATAGAGTTCT+CGG | 0.466694 | 7.4:-76166307 | MS.gene74110:CDS |
| GTGTGTCGTGGGTATCTTGT+TGG | 0.466820 | 7.4:-76168190 | MS.gene74110:CDS |
| CGGAGAGGAATCCACAATAC+TGG | 0.472256 | 7.4:-76166118 | MS.gene74110:CDS |
| AGTAACATTCTCTTCTAAAA+GGG | 0.475906 | 7.4:+76168410 | None:intergenic |
| CAGATACAGCCTTCTTCCAC+AGG | 0.477668 | 7.4:-76165931 | MS.gene74110:CDS |
| ATAATTGCTAATCGGTATAG+TGG | 0.482061 | 7.4:+76166347 | None:intergenic |
| CTCTTCCATTAGTGGAGGCC+CGG | 0.484425 | 7.4:+76167714 | None:intergenic |
| CAATTAAACAAGGTTGTGAC+AGG | 0.487725 | 7.4:-76166732 | MS.gene74110:CDS |
| CTTGGGGTGAACTTTATCTC+AGG | 0.490160 | 7.4:+76168558 | None:intergenic |
| CATGACCAAGATCATGATCA+TGG | 0.492732 | 7.4:-76168648 | MS.gene74110:CDS |
| CTTCCTTAATCATGAATCTA+CGG | 0.496022 | 7.4:+76166985 | None:intergenic |
| AAATGTAAATAAGATTAAGA+TGG | 0.497083 | 7.4:-76166060 | MS.gene74110:CDS |
| TGTATTTCCCCTACTGGCCC+AGG | 0.497804 | 7.4:-76166952 | MS.gene74110:CDS |
| TTGCGGCTAATTTAGATCGC+TGG | 0.498595 | 7.4:+76167905 | None:intergenic |
| ATCGGCAAATCTCAAAGTAT+TGG | 0.499777 | 7.4:-76167682 | MS.gene74110:CDS |
| TCCAGGTTCTTCTTCTGGTG+AGG | 0.503770 | 7.4:-76168307 | MS.gene74110:CDS |
| CATCGATCGCCAACATCGAA+TGG | 0.504479 | 7.4:+76166546 | None:intergenic |
| AATGTAAATAAGATTAAGAT+GGG | 0.505449 | 7.4:-76166059 | MS.gene74110:CDS |
| TTCATGTTTGTGTGTGTCGT+GGG | 0.518234 | 7.4:-76168201 | MS.gene74110:CDS |
| CTATATTCTTACTTGCAACA+AGG | 0.521854 | 7.4:+76167385 | None:intergenic |
| TGGGTTGAAGCAATGTGTCC+AGG | 0.522262 | 7.4:-76167986 | MS.gene74110:CDS |
| TGTATTCTAAGCCCAAATCA+AGG | 0.522553 | 7.4:-76168464 | MS.gene74110:CDS |
| TCATCACAGCTAGTACTAGC+GGG | 0.526862 | 7.4:-76166633 | MS.gene74110:CDS |
| AAATTAGGATGCCAGTATTG+TGG | 0.533187 | 7.4:+76166107 | None:intergenic |
| GCCAGTAGGGGAAATACAAA+AGG | 0.533230 | 7.4:+76166957 | None:intergenic |
| TGATAAATAGTACCCATGTA+AGG | 0.534123 | 7.4:+76167938 | None:intergenic |
| TCGGAGAAGTGAACTAGTGA+TGG | 0.536390 | 7.4:-76165985 | MS.gene74110:CDS |
| CCATCCTCTTCCATTAGTGG+AGG | 0.537252 | 7.4:+76167709 | None:intergenic |
| TCCTCACCAGAAGAAGAACC+TGG | 0.538196 | 7.4:+76168306 | None:intergenic |
| CGGGCCTCCACTAATGGAAG+AGG | 0.539056 | 7.4:-76167713 | MS.gene74110:CDS |
| TTGAACTCCCGAAACTGAAA+CGG | 0.539111 | 7.4:+76167659 | None:intergenic |
| AGTTTGGGGAGAAGGTGAAT+CGG | 0.542479 | 7.4:-76166004 | MS.gene74110:CDS |
| ACACCTTTAATGGCATCTCC+AGG | 0.542913 | 7.4:-76168324 | MS.gene74110:CDS |
| TAAAGAAATTACTAATGAGA+TGG | 0.545783 | 7.4:-76167455 | MS.gene74110:CDS |
| GATGAACACCCTGTGGAAGA+AGG | 0.550548 | 7.4:+76165922 | None:intergenic |
| AACTGATCCAAATGAAAACC+TGG | 0.550631 | 7.4:+76167968 | None:intergenic |
| GTTCATGTTTGTGTGTGTCG+TGG | 0.551999 | 7.4:-76168202 | MS.gene74110:CDS |
| GGACACATTGCTTCAACCCA+TGG | 0.552760 | 7.4:+76167989 | None:intergenic |
| TTAATGCATCCATTCGATGT+TGG | 0.553302 | 7.4:-76166555 | MS.gene74110:CDS |
| AATTAGCCCTGTATCTGCCT+GGG | 0.553573 | 7.4:+76166935 | None:intergenic |
| ATGTTCTGCAGATTCTCTCC+GGG | 0.553700 | 7.4:-76167732 | MS.gene74110:CDS |
| CAGTTTGGTTCTCCTTACAT+GGG | 0.553964 | 7.4:-76167950 | MS.gene74110:CDS |
| AGTCGCTAGTCTCTTATGCT+GGG | 0.554381 | 7.4:+76168242 | None:intergenic |
| CTGGCATCCTAATTTCAGCT+TGG | 0.555043 | 7.4:-76166099 | MS.gene74110:CDS |
| GTTGGCTAGCTTAACAGTTG+AGG | 0.556372 | 7.4:-76168172 | MS.gene74110:CDS |
| ATTTGTAGCAGGAACTTGTG+GGG | 0.558637 | 7.4:+76168524 | None:intergenic |
| TGCTTAGGTTCATGAATGGA+TGG | 0.560666 | 7.4:-76168762 | None:intergenic |
| TAAAGGTGGCACAGAGAAAG+AGG | 0.562858 | 7.4:-76167632 | MS.gene74110:CDS |
| GAGGTGGGGTATGCTTGTGA+TGG | 0.566303 | 7.4:-76168112 | MS.gene74110:CDS |
| CCTCCACTAATGGAAGAGGA+TGG | 0.567888 | 7.4:-76167709 | MS.gene74110:CDS |
| TATATTCTTACTTGCAACAA+GGG | 0.569030 | 7.4:+76167386 | None:intergenic |
| TAGATGCAGTGATGAATTCA+AGG | 0.569731 | 7.4:-76167540 | MS.gene74110:CDS |
| CATGATCATGATCTTGGTCA+TGG | 0.572577 | 7.4:+76168649 | None:intergenic |
| CTCCACTAATGGAAGAGGAT+GGG | 0.574488 | 7.4:-76167708 | MS.gene74110:CDS |
| TTTGTAGCAGGAACTTGTGG+GGG | 0.574718 | 7.4:+76168525 | None:intergenic |
| AGGTGGTGAAGTAAACATGA+TGG | 0.584745 | 7.4:-76168724 | MS.gene74110:CDS |
| TTATCAAGAACGTAAAGCAC+TGG | 0.590875 | 7.4:-76166790 | MS.gene74110:CDS |
| GGAGAAGAAAAGAGAAGTCG+TGG | 0.591078 | 7.4:-76168703 | MS.gene74110:CDS |
| CGTGGTGGCAATTTCAAATG+TGG | 0.595750 | 7.4:-76168685 | MS.gene74110:CDS |
| GTATCTGCCTGGGCCAGTAG+GGG | 0.605173 | 7.4:+76166945 | None:intergenic |
| GATCAAAGAAAGATTTGACA+TGG | 0.605754 | 7.4:+76167782 | None:intergenic |
| GGTTTCTGAATGATGTAACA+TGG | 0.606401 | 7.4:-76167882 | MS.gene74110:CDS |
| AAAGTCTTTAGCAGATTGGG+TGG | 0.609117 | 7.4:-76166907 | MS.gene74110:intron |
| CTCATCACAGCTAGTACTAG+CGG | 0.611663 | 7.4:-76166634 | MS.gene74110:CDS |
| ATGACCAAGATCATGATCAT+GGG | 0.612435 | 7.4:-76168647 | MS.gene74110:CDS |
| AGCGATCTAAATTAGCCGCA+AGG | 0.612871 | 7.4:-76167903 | MS.gene74110:CDS |
| TACATCATTCAGAAACCTTG+CGG | 0.619295 | 7.4:+76167888 | None:intergenic |
| CTAGTACTAGCTGTGATGAG+AGG | 0.620783 | 7.4:+76166637 | None:intergenic |
| GGGAGTTCAACTGTTAAAGG+TGG | 0.622194 | 7.4:-76167646 | MS.gene74110:CDS |
| TGTGACAGGGGTCTTAGTAG+TGG | 0.628042 | 7.4:-76166718 | MS.gene74110:CDS |
| TGCTAATCGGTATAGTGGCG+AGG | 0.632494 | 7.4:+76166352 | None:intergenic |
| GGTACTATTTATCAATCATG+AGG | 0.633489 | 7.4:-76167929 | MS.gene74110:CDS |
| ATTAAACAAGGTTGTGACAG+GGG | 0.642687 | 7.4:-76166730 | MS.gene74110:CDS |
| ATATTCTTACTTGCAACAAG+GGG | 0.645688 | 7.4:+76167387 | None:intergenic |
| AGCTGTTAAACAATTAAACA+AGG | 0.650076 | 7.4:-76166742 | MS.gene74110:CDS |
| TAACAGTTGAGGAACTGAGA+AGG | 0.650762 | 7.4:-76168161 | MS.gene74110:CDS |
| TACTGGCCCAGGCAGATACA+GGG | 0.658380 | 7.4:-76166941 | MS.gene74110:CDS |
| AATGAACTTTCAAGAGTTTG+GGG | 0.659127 | 7.4:-76166018 | MS.gene74110:CDS |
| AATTAAACAAGGTTGTGACA+GGG | 0.665376 | 7.4:-76166731 | MS.gene74110:CDS |
| GTGGTGGCAATTTCAAATGT+GGG | 0.669590 | 7.4:-76168684 | MS.gene74110:CDS |
| ATGTGTTGTAGATGGTGTTG+AGG | 0.674889 | 7.4:-76166526 | MS.gene74110:intron |
| TAGTGGTGAGCATAGTAGTG+TGG | 0.676510 | 7.4:-76166701 | MS.gene74110:CDS |
| AGATACAGCCTTCTTCCACA+GGG | 0.677647 | 7.4:-76165930 | MS.gene74110:CDS |
| AAACAAATAGGTACGCGGAG+AGG | 0.683241 | 7.4:-76166133 | MS.gene74110:intron |
| CATCACAGCTAGTACTAGCG+GGG | 0.699530 | 7.4:-76166632 | MS.gene74110:CDS |
| CAAAATCTTCATGGTCCACG+CGG | 0.704397 | 7.4:+76167564 | None:intergenic |
| GATGGTAACAATAAGCAACA+AGG | 0.706956 | 7.4:-76168744 | MS.gene74110:CDS |
| AGCAAGAGAAAGTCTCCGCG+TGG | 0.714276 | 7.4:-76167579 | MS.gene74110:CDS |
| GAAGAAAAGAGAAGTCGTGG+TGG | 0.739654 | 7.4:-76168700 | MS.gene74110:CDS |
| TATCTGAGATGAACACCCTG+TGG | 0.746948 | 7.4:+76165915 | None:intergenic |
| GGTAACAATAAGCAACAAGG+TGG | 0.752941 | 7.4:-76168741 | MS.gene74110:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAACAATAAAAATAAATT+TGG | + | chr7.4:76168144-76168163 | None:intergenic | 10.0% |
| !! | AAATGTAAATAAGATTAAGA+TGG | - | chr7.4:76168571-76168590 | MS.gene74110:CDS | 15.0% |
| !! | AATGTAAATAAGATTAAGAT+GGG | - | chr7.4:76168572-76168591 | MS.gene74110:CDS | 15.0% |
| !!! | ATAGAATGCATTATTTTTTT+GGG | - | chr7.4:76167265-76167284 | MS.gene74110:intron | 15.0% |
| !!! | GTTTTGTTTAAAAAACAAAT+AGG | - | chr7.4:76168486-76168505 | MS.gene74110:CDS | 15.0% |
| !!! | TATAGAATGCATTATTTTTT+TGG | - | chr7.4:76167264-76167283 | MS.gene74110:intron | 15.0% |
| !! | AACATTCTTGAAAACATAAT+AGG | + | chr7.4:76167217-76167236 | None:intergenic | 20.0% |
| !! | TAAAGAAATTACTAATGAGA+TGG | - | chr7.4:76167176-76167195 | MS.gene74110:intron | 20.0% |
| !! | TATTAATGCATTGAATTATC+TGG | - | chr7.4:76168173-76168192 | MS.gene74110:CDS | 20.0% |
| !! | TCAAATAAGTCAATGTAAAT+AGG | + | chr7.4:76167346-76167365 | None:intergenic | 20.0% |
| !!! | ACACAGAAATTTTAAGATTA+AGG | + | chr7.4:76168450-76168469 | None:intergenic | 20.0% |
| !!! | CTAATTTGTATATCCAAATT+AGG | - | chr7.4:76167525-76167544 | MS.gene74110:CDS | 20.0% |
| !!! | TAGAATGCATTATTTTTTTG+GGG | - | chr7.4:76167266-76167285 | MS.gene74110:intron | 20.0% |
| ! | AAGTAACATTCTCTTCTAAA+AGG | + | chr7.4:76166225-76166244 | None:intergenic | 25.0% |
| ! | AGCTGTTAAACAATTAAACA+AGG | - | chr7.4:76167889-76167908 | MS.gene74110:CDS | 25.0% |
| ! | AGTTATCATCATCATAATGA+AGG | - | chr7.4:76167770-76167789 | MS.gene74110:CDS | 25.0% |
| ! | ATATACATTTAGGCCTAATT+TGG | + | chr7.4:76167541-76167560 | None:intergenic | 25.0% |
| ! | CATTAAAAACACAAAGATGA+TGG | + | chr7.4:76168062-76168081 | None:intergenic | 25.0% |
| ! | CTATACTTTCTACCATATTT+GGG | + | chr7.4:76168318-76168337 | None:intergenic | 25.0% |
| ! | CTTCTGTAATAATTGCTAAT+CGG | + | chr7.4:76168295-76168314 | None:intergenic | 25.0% |
| ! | CTTGAAGCTTAATAATGAAA+AGG | - | chr7.4:76168237-76168256 | MS.gene74110:CDS | 25.0% |
| ! | TAGCTAATGAAAACAACTTA+TGG | - | chr7.4:76167447-76167466 | MS.gene74110:CDS | 25.0% |
| ! | TATATTCTTACTTGCAACAA+GGG | + | chr7.4:76167248-76167267 | None:intergenic | 25.0% |
| ! | TCTATACTTTCTACCATATT+TGG | + | chr7.4:76168319-76168338 | None:intergenic | 25.0% |
| ! | TTAAAAAACAAATAGGTACG+CGG | - | chr7.4:76168493-76168512 | MS.gene74110:CDS | 25.0% |
| !! | AGTAACATTCTCTTCTAAAA+GGG | + | chr7.4:76166224-76166243 | None:intergenic | 25.0% |
| !! | GAACTTTTTGTTGAAGAAAA+AGG | - | chr7.4:76166606-76166625 | MS.gene74110:CDS | 25.0% |
| !!! | AGAGTTATTGTTGCTTTTAA+GGG | - | chr7.4:76167320-76167339 | MS.gene74110:intron | 25.0% |
| !!! | ATAAGTTGTTTTCATTAGCT+AGG | + | chr7.4:76167448-76167467 | None:intergenic | 25.0% |
| !!! | CTGAAGTTTTATCACAAATT+TGG | - | chr7.4:76168410-76168429 | MS.gene74110:CDS | 25.0% |
| !!! | TAGAGTTATTGTTGCTTTTA+AGG | - | chr7.4:76167319-76167338 | MS.gene74110:intron | 25.0% |
| !!! | TGTTTGTATTTTTCAGTTGA+AGG | - | chr7.4:76167817-76167836 | MS.gene74110:CDS | 25.0% |
| !!! | TTTTAGAAGAGAATGTTACT+TGG | - | chr7.4:76166224-76166243 | MS.gene74110:intron | 25.0% |
| AACTGAGAAGGATACATATT+TGG | - | chr7.4:76166482-76166501 | MS.gene74110:intron | 30.0% | |
| AAGAGTGGTATATCAAAACA+AGG | + | chr7.4:76167572-76167591 | None:intergenic | 30.0% | |
| AATGAACTTTCAAGAGTTTG+GGG | - | chr7.4:76168613-76168632 | MS.gene74110:CDS | 30.0% | |
| AATGTCCCTATTCATAAAGA+GGG | + | chr7.4:76167612-76167631 | None:intergenic | 30.0% | |
| AATTAAACAAGGTTGTGACA+GGG | - | chr7.4:76167900-76167919 | MS.gene74110:CDS | 30.0% | |
| ACAAACATTATAGTCGAAAC+AGG | + | chr7.4:76167804-76167823 | None:intergenic | 30.0% | |
| ACAATGAACTTTCAAGAGTT+TGG | - | chr7.4:76168611-76168630 | MS.gene74110:CDS | 30.0% | |
| AGAGAAAGAGGTTATTGATA+TGG | - | chr7.4:76167011-76167030 | MS.gene74110:intron | 30.0% | |
| ATAATTGCTAATCGGTATAG+TGG | + | chr7.4:76168287-76168306 | None:intergenic | 30.0% | |
| ATATTCTTACTTGCAACAAG+GGG | + | chr7.4:76167247-76167266 | None:intergenic | 30.0% | |
| ATCAAGTGAATTAGAGATTG+TGG | + | chr7.4:76167121-76167140 | None:intergenic | 30.0% | |
| ATCCTGACGAAATCATTTAT+AGG | - | chr7.4:76166347-76166366 | MS.gene74110:CDS | 30.0% | |
| ATTACTACCAAGCTGAAATT+AGG | + | chr7.4:76168542-76168561 | None:intergenic | 30.0% | |
| CAAAAAGTCTTTAGCAGATT+GGG | - | chr7.4:76167721-76167740 | MS.gene74110:CDS | 30.0% | |
| CAATGAACTTTCAAGAGTTT+GGG | - | chr7.4:76168612-76168631 | MS.gene74110:CDS | 30.0% | |
| CACTGAAAGAAAAAATAACG+AGG | - | chr7.4:76168380-76168399 | MS.gene74110:CDS | 30.0% | |
| CTATATTCTTACTTGCAACA+AGG | + | chr7.4:76167249-76167268 | None:intergenic | 30.0% | |
| CTTCCTTAATCATGAATCTA+CGG | + | chr7.4:76167649-76167668 | None:intergenic | 30.0% | |
| GATCAAAGAAAGATTTGACA+TGG | + | chr7.4:76166852-76166871 | None:intergenic | 30.0% | |
| GATGTAAAAAATGAACGAAC+TGG | - | chr7.4:76167153-76167172 | MS.gene74110:intron | 30.0% | |
| GGTACTATTTATCAATCATG+AGG | - | chr7.4:76166702-76166721 | MS.gene74110:CDS | 30.0% | |
| GTATATCAAAACAAGGAGAA+GGG | + | chr7.4:76167565-76167584 | None:intergenic | 30.0% | |
| TGATAAATAGTACCCATGTA+AGG | + | chr7.4:76166696-76166715 | None:intergenic | 30.0% | |
| TGTTCTACAAACCTTGATTT+GGG | + | chr7.4:76166181-76166200 | None:intergenic | 30.0% | |
| TTATTACAGAAGCCCAAATA+TGG | - | chr7.4:76168303-76168322 | MS.gene74110:CDS | 30.0% | |
| TTGTTCTACAAACCTTGATT+TGG | + | chr7.4:76166182-76166201 | None:intergenic | 30.0% | |
| ! | AGGATACATATTTGGAGTTT+AGG | - | chr7.4:76166490-76166509 | MS.gene74110:intron | 30.0% |
| ! | GGATACATATTTGGAGTTTA+GGG | - | chr7.4:76166491-76166510 | MS.gene74110:intron | 30.0% |
| AAATTAGGATGCCAGTATTG+TGG | + | chr7.4:76168527-76168546 | None:intergenic | 35.0% | |
| AACAATGTGCATGAACCATT+TGG | + | chr7.4:76166569-76166588 | None:intergenic | 35.0% | |
| AACTGATCCAAATGAAAACC+TGG | + | chr7.4:76166666-76166685 | None:intergenic | 35.0% | |
| AATGTGCCCTCTTTATGAAT+AGG | - | chr7.4:76167603-76167622 | MS.gene74110:CDS | 35.0% | |
| ACAAAAATGCTCCAATGAGA+AGG | + | chr7.4:76166786-76166805 | None:intergenic | 35.0% | |
| ACTCCGTAGATTCATGATTA+AGG | - | chr7.4:76167643-76167662 | MS.gene74110:CDS | 35.0% | |
| ATCGGCAAATCTCAAAGTAT+TGG | - | chr7.4:76166949-76166968 | MS.gene74110:CDS | 35.0% | |
| ATGACCAAGATCATGATCAT+GGG | - | chr7.4:76165984-76166003 | MS.gene74110:CDS | 35.0% | |
| ATGTGCCCTCTTTATGAATA+GGG | - | chr7.4:76167604-76167623 | MS.gene74110:CDS | 35.0% | |
| ATTAAACAAGGTTGTGACAG+GGG | - | chr7.4:76167901-76167920 | MS.gene74110:CDS | 35.0% | |
| CAAAAATGCTCCAATGAGAA+GGG | + | chr7.4:76166785-76166804 | None:intergenic | 35.0% | |
| CAATGTCCCTATTCATAAAG+AGG | + | chr7.4:76167613-76167632 | None:intergenic | 35.0% | |
| CAATTAAACAAGGTTGTGAC+AGG | - | chr7.4:76167899-76167918 | MS.gene74110:CDS | 35.0% | |
| CATTTGAGAGAACTTGTATC+AGG | + | chr7.4:76168749-76168768 | None:intergenic | 35.0% | |
| CCAAAAAGTCTTTAGCAGAT+TGG | - | chr7.4:76167720-76167739 | MS.gene74110:CDS | 35.0% | |
| CTAAAAGGGTCTCATCAATA+GGG | + | chr7.4:76166210-76166229 | None:intergenic | 35.0% | |
| GAATCTGCAGAACATATTGA+TGG | + | chr7.4:76166894-76166913 | None:intergenic | 35.0% | |
| GATGGTAACAATAAGCAACA+AGG | - | chr7.4:76165887-76165906 | MS.gene74110:CDS | 35.0% | |
| GCTTAGAATACACTGATCTT+AGG | + | chr7.4:76166159-76166178 | None:intergenic | 35.0% | |
| GGTATATCAAAACAAGGAGA+AGG | + | chr7.4:76167566-76167585 | None:intergenic | 35.0% | |
| GGTGAATAAGAGTTCCTATA+AGG | + | chr7.4:76166283-76166302 | None:intergenic | 35.0% | |
| GGTTTCTGAATGATGTAACA+TGG | - | chr7.4:76166749-76166768 | MS.gene74110:CDS | 35.0% | |
| TACATCATTCAGAAACCTTG+CGG | + | chr7.4:76166746-76166765 | None:intergenic | 35.0% | |
| TAGATGCAGTGATGAATTCA+AGG | - | chr7.4:76167091-76167110 | MS.gene74110:intron | 35.0% | |
| TCTAAAAGGGTCTCATCAAT+AGG | + | chr7.4:76166211-76166230 | None:intergenic | 35.0% | |
| TGCATCTACCAAAATCTTCA+TGG | + | chr7.4:76167079-76167098 | None:intergenic | 35.0% | |
| TGCCTATAAATGATTTCGTC+AGG | + | chr7.4:76166352-76166371 | None:intergenic | 35.0% | |
| TGTATTCTAAGCCCAAATCA+AGG | - | chr7.4:76166167-76166186 | MS.gene74110:intron | 35.0% | |
| TTAATGCATCCATTCGATGT+TGG | - | chr7.4:76168076-76168095 | MS.gene74110:CDS | 35.0% | |
| TTATCAAGAACGTAAAGCAC+TGG | - | chr7.4:76167841-76167860 | MS.gene74110:CDS | 35.0% | |
| TTCACCTAGAACACCTTTAA+TGG | - | chr7.4:76166297-76166316 | MS.gene74110:CDS | 35.0% | |
| TTGAATTATCTGGCAGCTAT+TGG | - | chr7.4:76168183-76168202 | MS.gene74110:CDS | 35.0% | |
| ! | AATGTGTCCAGGTTTTCATT+TGG | - | chr7.4:76166656-76166675 | MS.gene74110:CDS | 35.0% |
| ! | ATATTTGGAGTTTAGGGCTT+TGG | - | chr7.4:76166497-76166516 | MS.gene74110:intron | 35.0% |
| ! | CCAATCTGCTAAAGACTTTT+TGG | + | chr7.4:76167723-76167742 | None:intergenic | 35.0% |
| ! | GGTAGAAAGTATAGAGTTCT+CGG | - | chr7.4:76168324-76168343 | MS.gene74110:CDS | 35.0% |
| ! | GGTTTTCATTTGGATCAGTT+TGG | - | chr7.4:76166666-76166685 | MS.gene74110:CDS | 35.0% |
| ! | GTAAGGTTTTCATTTGTAGC+AGG | + | chr7.4:76166121-76166140 | None:intergenic | 35.0% |
| !! | CATTTTAGCAACAACAAGAG+TGG | + | chr7.4:76167587-76167606 | None:intergenic | 35.0% |
| !! | TCTCATTGGAGCATTTTTGT+GGG | - | chr7.4:76166786-76166805 | MS.gene74110:CDS | 35.0% |
| !! | TTCTCATTGGAGCATTTTTG+TGG | - | chr7.4:76166785-76166804 | MS.gene74110:CDS | 35.0% |
| !! | TTGGCTTGTTAGTTACCAAA+TGG | - | chr7.4:76166551-76166570 | MS.gene74110:CDS | 35.0% |
| !!! | AAGGTGCTTTATTTTGTCCA+TGG | - | chr7.4:76166625-76166644 | MS.gene74110:CDS | 35.0% |
| !!! | AGGTGCTTTATTTTGTCCAT+GGG | - | chr7.4:76166626-76166645 | MS.gene74110:CDS | 35.0% |
| AAAGTCTTTAGCAGATTGGG+TGG | - | chr7.4:76167724-76167743 | MS.gene74110:CDS | 40.0% | |
| AGGTGGTGAAGTAAACATGA+TGG | - | chr7.4:76165907-76165926 | MS.gene74110:CDS | 40.0% | |
| AGTAGTGTGGCTTCTTCTAA+TGG | - | chr7.4:76167943-76167962 | MS.gene74110:CDS | 40.0% | |
| ATGACACCAGCAGAGAAAAT+TGG | - | chr7.4:76168355-76168374 | MS.gene74110:CDS | 40.0% | |
| ATGGAAGAGGATGGGAAAAT+CGG | - | chr7.4:76166931-76166950 | MS.gene74110:CDS | 40.0% | |
| ATTTGTAGCAGGAACTTGTG+GGG | + | chr7.4:76166110-76166129 | None:intergenic | 40.0% | |
| CATGACCAAGATCATGATCA+TGG | - | chr7.4:76165983-76166002 | MS.gene74110:CDS | 40.0% | |
| CATGATCATGATCTTGGTCA+TGG | + | chr7.4:76165985-76166004 | None:intergenic | 40.0% | |
| CATTTGTAGCAGGAACTTGT+GGG | + | chr7.4:76166111-76166130 | None:intergenic | 40.0% | |
| GGTAACAATAAGCAACAAGG+TGG | - | chr7.4:76165890-76165909 | MS.gene74110:CDS | 40.0% | |
| GTGGTGGCAATTTCAAATGT+GGG | - | chr7.4:76165947-76165966 | MS.gene74110:CDS | 40.0% | |
| TAACAGTTGAGGAACTGAGA+AGG | - | chr7.4:76166470-76166489 | MS.gene74110:intron | 40.0% | |
| TATGTTCTGCAGATTCTCTC+CGG | - | chr7.4:76166898-76166917 | MS.gene74110:intron | 40.0% | |
| TCAACCCATGATCATGATCT+TGG | + | chr7.4:76165991-76166010 | None:intergenic | 40.0% | |
| TCATTTGTAGCAGGAACTTG+TGG | + | chr7.4:76166112-76166131 | None:intergenic | 40.0% | |
| TTCATGTTTGTGTGTGTCGT+GGG | - | chr7.4:76166430-76166449 | MS.gene74110:CDS | 40.0% | |
| TTCGGGAGTTCAACTGTTAA+AGG | - | chr7.4:76166982-76167001 | MS.gene74110:CDS | 40.0% | |
| TTGAACTCCCGAAACTGAAA+CGG | + | chr7.4:76166975-76166994 | None:intergenic | 40.0% | |
| ! | ACTCTTGTTTCCCTTCTCAT+TGG | - | chr7.4:76166772-76166791 | MS.gene74110:CDS | 40.0% |
| ! | ATGTGTTGTAGATGGTGTTG+AGG | - | chr7.4:76168105-76168124 | MS.gene74110:CDS | 40.0% |
| ! | CAGCTGTTACTTCACCTTAT+AGG | - | chr7.4:76166266-76166285 | MS.gene74110:CDS | 40.0% |
| ! | GGAGAAGGGCATATACATTT+AGG | + | chr7.4:76167551-76167570 | None:intergenic | 40.0% |
| ! | TCCTTTTGTATTTCCCCTAC+TGG | - | chr7.4:76167673-76167692 | MS.gene74110:CDS | 40.0% |
| ! | TCTTAGGAGAGTTTTTCTCG+TGG | + | chr7.4:76166143-76166162 | None:intergenic | 40.0% |
| !! | AGCTGTTTTCGTGTCACATA+AGG | + | chr7.4:76167873-76167892 | None:intergenic | 40.0% |
| !! | AGTATTGGCCGTTTCAGTTT+CGG | - | chr7.4:76166964-76166983 | MS.gene74110:CDS | 40.0% |
| !! | CAGTTTGGTTCTCCTTACAT+GGG | - | chr7.4:76166681-76166700 | MS.gene74110:CDS | 40.0% |
| !! | GATGCCATTAAAGGTGTTCT+AGG | + | chr7.4:76166304-76166323 | None:intergenic | 40.0% |
| !! | TCAGTTTGGTTCTCCTTACA+TGG | - | chr7.4:76166680-76166699 | MS.gene74110:CDS | 40.0% |
| !!! | CTTGTGATGGCGACATTTTT+TGG | - | chr7.4:76166532-76166551 | MS.gene74110:CDS | 40.0% |
| !!! | GACACTGTTGCTATCGATTT+TGG | - | chr7.4:76166816-76166835 | MS.gene74110:intron | 40.0% |
| AAACAAATAGGTACGCGGAG+AGG | - | chr7.4:76168498-76168517 | MS.gene74110:CDS | 45.0% | |
| AATTAGCCCTGTATCTGCCT+GGG | + | chr7.4:76167699-76167718 | None:intergenic | 45.0% | |
| ACACCTTTAATGGCATCTCC+AGG | - | chr7.4:76166307-76166326 | MS.gene74110:CDS | 45.0% | |
| AGACTGACTGCTAGAGCAAA+TGG | - | chr7.4:76167393-76167412 | MS.gene74110:intron | 45.0% | |
| AGATACAGCCTTCTTCCACA+GGG | - | chr7.4:76168701-76168720 | MS.gene74110:CDS | 45.0% | |
| AGCGATCTAAATTAGCCGCA+AGG | - | chr7.4:76166728-76166747 | MS.gene74110:CDS | 45.0% | |
| AGTTTGGGGAGAAGGTGAAT+CGG | - | chr7.4:76168627-76168646 | MS.gene74110:CDS | 45.0% | |
| ATGTTCTGCAGATTCTCTCC+GGG | - | chr7.4:76166899-76166918 | MS.gene74110:intron | 45.0% | |
| CAAAATCTTCATGGTCCACG+CGG | + | chr7.4:76167070-76167089 | None:intergenic | 45.0% | |
| CGTGGTGGCAATTTCAAATG+TGG | - | chr7.4:76165946-76165965 | MS.gene74110:CDS | 45.0% | |
| CTAGTACTAGCTGTGATGAG+AGG | + | chr7.4:76167997-76168016 | None:intergenic | 45.0% | |
| CTCATCACAGCTAGTACTAG+CGG | - | chr7.4:76167997-76168016 | MS.gene74110:CDS | 45.0% | |
| CTCCACTAATGGAAGAGGAT+GGG | - | chr7.4:76166923-76166942 | MS.gene74110:CDS | 45.0% | |
| CTGGCATCCTAATTTCAGCT+TGG | - | chr7.4:76168532-76168551 | MS.gene74110:CDS | 45.0% | |
| CTTGGGGTGAACTTTATCTC+AGG | + | chr7.4:76166076-76166095 | None:intergenic | 45.0% | |
| CTTTAGCAGATTGGGTGGTA+AGG | - | chr7.4:76167729-76167748 | MS.gene74110:CDS | 45.0% | |
| CTTTCAAGAGTTTGGGGAGA+AGG | - | chr7.4:76168619-76168638 | MS.gene74110:CDS | 45.0% | |
| GAACCTGGAGATGCCATTAA+AGG | + | chr7.4:76166313-76166332 | None:intergenic | 45.0% | |
| GAAGAAAAGAGAAGTCGTGG+TGG | - | chr7.4:76165931-76165950 | MS.gene74110:CDS | 45.0% | |
| GCATAAGAGACTAGCGACTA+TGG | - | chr7.4:76166393-76166412 | MS.gene74110:CDS | 45.0% | |
| GCCAGTAGGGGAAATACAAA+AGG | + | chr7.4:76167677-76167696 | None:intergenic | 45.0% | |
| GGAGAAGAAAAGAGAAGTCG+TGG | - | chr7.4:76165928-76165947 | MS.gene74110:CDS | 45.0% | |
| GGGAGTTCAACTGTTAAAGG+TGG | - | chr7.4:76166985-76167004 | MS.gene74110:CDS | 45.0% | |
| GTTCATGTTTGTGTGTGTCG+TGG | - | chr7.4:76166429-76166448 | MS.gene74110:CDS | 45.0% | |
| TAAAGGTGGCACAGAGAAAG+AGG | - | chr7.4:76166999-76167018 | MS.gene74110:CDS | 45.0% | |
| TAATTAGCCCTGTATCTGCC+TGG | + | chr7.4:76167700-76167719 | None:intergenic | 45.0% | |
| TAGTGGTGAGCATAGTAGTG+TGG | - | chr7.4:76167930-76167949 | MS.gene74110:CDS | 45.0% | |
| TCATCACAGCTAGTACTAGC+GGG | - | chr7.4:76167998-76168017 | MS.gene74110:CDS | 45.0% | |
| TCGGAGAAGTGAACTAGTGA+TGG | - | chr7.4:76168646-76168665 | MS.gene74110:CDS | 45.0% | |
| TTCCCATCCTCTTCCATTAG+TGG | + | chr7.4:76166928-76166947 | None:intergenic | 45.0% | |
| TTGCGGCTAATTTAGATCGC+TGG | + | chr7.4:76166729-76166748 | None:intergenic | 45.0% | |
| TTTGTAGCAGGAACTTGTGG+GGG | + | chr7.4:76166109-76166128 | None:intergenic | 45.0% | |
| ! | AGTCGCTAGTCTCTTATGCT+GGG | + | chr7.4:76166392-76166411 | None:intergenic | 45.0% |
| ! | AGTGCTCCAATTTTCTCTGC+TGG | + | chr7.4:76168364-76168383 | None:intergenic | 45.0% |
| ! | GAACTTGTGGGGGTGTATTT+GGG | + | chr7.4:76166099-76166118 | None:intergenic | 45.0% |
| ! | GGAGAGTTTTTCTCGTGGTA+AGG | + | chr7.4:76166138-76166157 | None:intergenic | 45.0% |
| ! | GTATTGGCCGTTTCAGTTTC+GGG | - | chr7.4:76166965-76166984 | MS.gene74110:CDS | 45.0% |
| ! | TAGTCGCTAGTCTCTTATGC+TGG | + | chr7.4:76166393-76166412 | None:intergenic | 45.0% |
| ! | TATCTGAGATGAACACCCTG+TGG | + | chr7.4:76168719-76168738 | None:intergenic | 45.0% |
| ! | TTTGGAGTTTAGGGCTTTGG+AGG | - | chr7.4:76166500-76166519 | MS.gene74110:intron | 45.0% |
| !! | GTTGGCTAGCTTAACAGTTG+AGG | - | chr7.4:76166459-76166478 | MS.gene74110:intron | 45.0% |
| ATAGTGGCGAGGACAGAGTT+TGG | + | chr7.4:76168271-76168290 | None:intergenic | 50.0% | |
| CAGATACAGCCTTCTTCCAC+AGG | - | chr7.4:76168700-76168719 | MS.gene74110:CDS | 50.0% | |
| CATCACAGCTAGTACTAGCG+GGG | - | chr7.4:76167999-76168018 | MS.gene74110:CDS | 50.0% | |
| CATCGATCGCCAACATCGAA+TGG | + | chr7.4:76168088-76168107 | None:intergenic | 50.0% | |
| CCATCCTCTTCCATTAGTGG+AGG | + | chr7.4:76166925-76166944 | None:intergenic | 50.0% | |
| CCTCCACTAATGGAAGAGGA+TGG | - | chr7.4:76166922-76166941 | MS.gene74110:CDS | 50.0% | |
| CGGAGAGGAATCCACAATAC+TGG | - | chr7.4:76168513-76168532 | MS.gene74110:CDS | 50.0% | |
| GATGAACACCCTGTGGAAGA+AGG | + | chr7.4:76168712-76168731 | None:intergenic | 50.0% | |
| GCATCTCCAGGTTCTTCTTC+TGG | - | chr7.4:76166319-76166338 | MS.gene74110:CDS | 50.0% | |
| GGACACATTGCTTCAACCCA+TGG | + | chr7.4:76166645-76166664 | None:intergenic | 50.0% | |
| GGCGATCGATGTGTTGTAGA+TGG | - | chr7.4:76168097-76168116 | MS.gene74110:CDS | 50.0% | |
| GTACTAGCGGGGTTCATGTT+TGG | - | chr7.4:76168010-76168029 | MS.gene74110:CDS | 50.0% | |
| GTGTGTCGTGGGTATCTTGT+TGG | - | chr7.4:76166441-76166460 | MS.gene74110:intron | 50.0% | |
| TCCAGGTTCTTCTTCTGGTG+AGG | - | chr7.4:76166324-76166343 | MS.gene74110:CDS | 50.0% | |
| TCCTCACCAGAAGAAGAACC+TGG | + | chr7.4:76166328-76166347 | None:intergenic | 50.0% | |
| TGCTAATCGGTATAGTGGCG+AGG | + | chr7.4:76168282-76168301 | None:intergenic | 50.0% | |
| TGTGACAGGGGTCTTAGTAG+TGG | - | chr7.4:76167913-76167932 | MS.gene74110:CDS | 50.0% | |
| ! | CGCGTGGACCATGAAGATTT+TGG | - | chr7.4:76167068-76167087 | MS.gene74110:intron | 50.0% |
| ! | GGAACTTGTGGGGGTGTATT+TGG | + | chr7.4:76166100-76166119 | None:intergenic | 50.0% |
| ! | TGGGTTGAAGCAATGTGTCC+AGG | - | chr7.4:76166645-76166664 | MS.gene74110:CDS | 50.0% |
| !! | AGTTTAGGGCTTTGGAGGTG+GGG | - | chr7.4:76166505-76166524 | MS.gene74110:intron | 50.0% |
| !! | GAGTTTAGGGCTTTGGAGGT+GGG | - | chr7.4:76166504-76166523 | MS.gene74110:intron | 50.0% |
| AGCAAGAGAAAGTCTCCGCG+TGG | - | chr7.4:76167052-76167071 | MS.gene74110:intron | 55.0% | |
| CTCTTCCATTAGTGGAGGCC+CGG | + | chr7.4:76166920-76166939 | None:intergenic | 55.0% | |
| GAGGTGGGGTATGCTTGTGA+TGG | - | chr7.4:76166519-76166538 | MS.gene74110:intron | 55.0% | |
| TACTGGCCCAGGCAGATACA+GGG | - | chr7.4:76167690-76167709 | MS.gene74110:CDS | 55.0% | |
| TGTATCTGCCTGGGCCAGTA+GGG | + | chr7.4:76167690-76167709 | None:intergenic | 55.0% | |
| TGTATTTCCCCTACTGGCCC+AGG | - | chr7.4:76167679-76167698 | MS.gene74110:CDS | 55.0% | |
| ! | GTGGGGGTGTATTTGGGCTT+GGG | + | chr7.4:76166093-76166112 | None:intergenic | 55.0% |
| ! | TGGGGGTGTATTTGGGCTTG+GGG | + | chr7.4:76166092-76166111 | None:intergenic | 55.0% |
| ! | TGTGGGGGTGTATTTGGGCT+TGG | + | chr7.4:76166094-76166113 | None:intergenic | 55.0% |
| !! | GGAGTTTAGGGCTTTGGAGG+TGG | - | chr7.4:76166503-76166522 | MS.gene74110:intron | 55.0% |
| CGGGCCTCCACTAATGGAAG+AGG | - | chr7.4:76166918-76166937 | MS.gene74110:CDS | 60.0% | |
| CTACTGGCCCAGGCAGATAC+AGG | - | chr7.4:76167689-76167708 | MS.gene74110:CDS | 60.0% | |
| CTGTATCTGCCTGGGCCAGT+AGG | + | chr7.4:76167691-76167710 | None:intergenic | 60.0% | |
| GTATCTGCCTGGGCCAGTAG+GGG | + | chr7.4:76167689-76167708 | None:intergenic | 60.0% | |
| TCTCTCCGGGCCTCCACTAA+TGG | - | chr7.4:76166912-76166931 | MS.gene74110:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 76165884 | 76168769 | 76165884 | ID=MS.gene74110 |
| chr7.4 | mRNA | 76165884 | 76168769 | 76165884 | ID=MS.gene74110.t1;Parent=MS.gene74110 |
| chr7.4 | exon | 76167397 | 76168769 | 76167397 | ID=MS.gene74110.t1.exon1;Parent=MS.gene74110.t1 |
| chr7.4 | CDS | 76167397 | 76168769 | 76167397 | ID=cds.MS.gene74110.t1;Parent=MS.gene74110.t1 |
| chr7.4 | exon | 76166908 | 76167028 | 76166908 | ID=MS.gene74110.t1.exon2;Parent=MS.gene74110.t1 |
| chr7.4 | CDS | 76166908 | 76167028 | 76166908 | ID=cds.MS.gene74110.t1;Parent=MS.gene74110.t1 |
| chr7.4 | exon | 76166527 | 76166820 | 76166527 | ID=MS.gene74110.t1.exon3;Parent=MS.gene74110.t1 |
| chr7.4 | CDS | 76166527 | 76166820 | 76166527 | ID=cds.MS.gene74110.t1;Parent=MS.gene74110.t1 |
| chr7.4 | exon | 76166252 | 76166454 | 76166252 | ID=MS.gene74110.t1.exon4;Parent=MS.gene74110.t1 |
| chr7.4 | CDS | 76166252 | 76166454 | 76166252 | ID=cds.MS.gene74110.t1;Parent=MS.gene74110.t1 |
| chr7.4 | exon | 76165884 | 76166145 | 76165884 | ID=MS.gene74110.t1.exon5;Parent=MS.gene74110.t1 |
| chr7.4 | CDS | 76165884 | 76166145 | 76165884 | ID=cds.MS.gene74110.t1;Parent=MS.gene74110.t1 |
| Gene Sequence |
| Protein sequence |
