Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014981.t1 | XP_003603195.2 | 95.7 | 750 | 31 | 1 | 1 | 750 | 1 | 749 | 0.00E+00 | 1382.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014981.t1 | Q9LYG9 | 55.8 | 685 | 293 | 8 | 63 | 739 | 48 | 730 | 2.4e-200 | 700.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014981.t1 | G7J8D9 | 95.7 | 750 | 31 | 1 | 1 | 750 | 1 | 749 | 0.0e+00 | 1382.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene32773 | MS.gene014981 | PPI |
| MS.gene97525 | MS.gene014981 | PPI |
| MS.gene014978 | MS.gene014981 | PPI |
| MS.gene014981 | MS.gene42628 | PPI |
| MS.gene74110 | MS.gene014981 | PPI |
| MS.gene42681 | MS.gene014981 | PPI |
| MS.gene42628 | MS.gene014981 | PPI |
| MS.gene42686 | MS.gene014981 | PPI |
| MS.gene32764 | MS.gene014981 | PPI |
| MS.gene062410 | MS.gene014981 | PPI |
| MS.gene42622 | MS.gene014981 | PPI |
| MS.gene42688 | MS.gene014981 | PPI |
| MS.gene32770 | MS.gene014981 | PPI |
| MS.gene014973 | MS.gene014981 | PPI |
| MS.gene42620 | MS.gene014981 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014981.t1 | MTR_3g104920 | 95.733 | 750 | 31 | 1 | 1 | 750 | 1 | 749 | 0.0 | 1452 |
| MS.gene014981.t1 | MTR_3g104920 | 95.794 | 737 | 31 | 0 | 14 | 750 | 1 | 737 | 0.0 | 1429 |
| MS.gene014981.t1 | MTR_3g104990 | 80.466 | 773 | 126 | 5 | 1 | 750 | 1 | 771 | 0.0 | 1226 |
| MS.gene014981.t1 | MTR_3g104940 | 79.070 | 774 | 136 | 3 | 1 | 750 | 1 | 772 | 0.0 | 1197 |
| MS.gene014981.t1 | MTR_2g041220 | 51.901 | 684 | 293 | 12 | 77 | 739 | 77 | 745 | 0.0 | 673 |
| MS.gene014981.t1 | MTR_8g071250 | 43.393 | 666 | 338 | 12 | 89 | 739 | 47 | 688 | 2.31e-169 | 504 |
| MS.gene014981.t1 | MTR_1g113850 | 39.003 | 682 | 356 | 12 | 120 | 748 | 241 | 915 | 3.42e-149 | 459 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014981.t1 | AT5G12080 | 57.872 | 686 | 277 | 8 | 63 | 739 | 48 | 730 | 0.0 | 798 |
| MS.gene014981.t1 | AT5G12080 | 57.872 | 686 | 277 | 8 | 63 | 739 | 48 | 730 | 0.0 | 798 |
| MS.gene014981.t1 | AT5G12080 | 57.872 | 686 | 277 | 8 | 63 | 739 | 48 | 730 | 0.0 | 798 |
| MS.gene014981.t1 | AT5G19520 | 52.670 | 693 | 310 | 8 | 59 | 739 | 52 | 738 | 0.0 | 726 |
| MS.gene014981.t1 | AT5G19520 | 52.670 | 693 | 310 | 8 | 59 | 739 | 52 | 738 | 0.0 | 726 |
| MS.gene014981.t1 | AT2G17010 | 38.532 | 654 | 362 | 8 | 122 | 740 | 240 | 888 | 1.67e-151 | 464 |
| MS.gene014981.t1 | AT1G78610 | 40.506 | 632 | 340 | 6 | 147 | 747 | 211 | 837 | 3.75e-147 | 452 |
| MS.gene014981.t1 | AT3G14810 | 38.897 | 689 | 348 | 12 | 114 | 744 | 188 | 861 | 1.57e-146 | 451 |
| MS.gene014981.t1 | AT1G53470 | 39.871 | 622 | 321 | 9 | 170 | 746 | 251 | 864 | 2.28e-146 | 451 |
| MS.gene014981.t1 | AT2G17000 | 39.867 | 602 | 324 | 7 | 179 | 748 | 234 | 829 | 1.57e-135 | 421 |
| MS.gene014981.t1 | AT2G17000 | 39.867 | 602 | 324 | 7 | 179 | 748 | 234 | 829 | 2.36e-135 | 421 |
| MS.gene014981.t1 | AT3G14810 | 36.430 | 689 | 330 | 13 | 114 | 744 | 188 | 826 | 1.86e-127 | 400 |
| MS.gene014981.t1 | AT2G17010 | 35.854 | 357 | 193 | 7 | 173 | 498 | 295 | 646 | 2.78e-61 | 218 |
Find 152 sgRNAs with CRISPR-Local
Find 213 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTATACTTTCAACCATATT+TGG | 0.059180 | 3.2:-86660198 | None:intergenic |
| GACACTGTTGCTATCGATTT+TGG | 0.151071 | 3.2:+86658689 | MS.gene014981:CDS |
| TTCACCTAGAACACCTTTAA+TGG | 0.166704 | 3.2:+86658170 | MS.gene014981:CDS |
| AGGATACATATTTGGAGTTT+AGG | 0.218904 | 3.2:+86658363 | MS.gene014981:CDS |
| ACAATGAACTTTCAAGAGTT+TGG | 0.224035 | 3.2:+86660503 | MS.gene014981:CDS |
| CAGCTGTTACTTCACCTTAT+AGG | 0.232327 | 3.2:+86658139 | MS.gene014981:CDS |
| CTTCTGTAATAATTGCTAAT+TGG | 0.235852 | 3.2:-86660174 | None:intergenic |
| TAGTAACATTCTCTTCTAAA+AGG | 0.249703 | 3.2:-86658095 | None:intergenic |
| ACGACACCAGCAGAGAAAAT+TGG | 0.254266 | 3.2:+86660237 | MS.gene014981:CDS |
| GCATCTCCAGGTTCTTCTTC+TGG | 0.277547 | 3.2:+86658192 | MS.gene014981:CDS |
| GGATACATATTTGGAGTTTA+GGG | 0.285104 | 3.2:+86658364 | MS.gene014981:CDS |
| TTGTTCTACAAACCTTGATT+TGG | 0.285408 | 3.2:-86658052 | None:intergenic |
| CAATGAACTTTCAAGAGTTT+GGG | 0.286227 | 3.2:+86660504 | MS.gene014981:CDS |
| AACTGAGAAGGATACATATT+TGG | 0.299045 | 3.2:+86658355 | MS.gene014981:CDS |
| TTCGGGAGTTCAACTGTTAA+AGG | 0.302616 | 3.2:+86658855 | MS.gene014981:CDS |
| ATTACTACCAAGCTGAAATT+AGG | 0.311064 | 3.2:-86660431 | None:intergenic |
| TCTAAAAGGGTCTCATCAAT+AGG | 0.325584 | 3.2:-86658081 | None:intergenic |
| CTATACTTTCAACCATATTT+GGG | 0.329682 | 3.2:-86660197 | None:intergenic |
| ATATTTGGAGTTTAGGGCTT+TGG | 0.330737 | 3.2:+86658370 | MS.gene014981:CDS |
| CATTTGAGAGAACTTGTATC+AGG | 0.336074 | 3.2:-86660638 | None:intergenic |
| TCTCTCCGGGCCTCCACTAA+TGG | 0.337430 | 3.2:+86658785 | MS.gene014981:CDS |
| CTACTGGCCCAGGCAGATAC+AGG | 0.339554 | 3.2:+86659571 | MS.gene014981:CDS |
| ACTCCGTAGATTCATGATTA+AGG | 0.340419 | 3.2:+86659525 | MS.gene014981:CDS |
| ACTCTTGTTTCCCTTCTCAT+TGG | 0.349071 | 3.2:+86658645 | MS.gene014981:CDS |
| TTCCCAGCCTCTTCCATTAG+TGG | 0.352581 | 3.2:-86658798 | None:intergenic |
| GTACTAGCGGGGTTCATGTT+TGG | 0.355463 | 3.2:+86659892 | MS.gene014981:CDS |
| TTATTACAGAAGCCCAAATA+TGG | 0.356757 | 3.2:+86660185 | MS.gene014981:CDS |
| GAACCTGGAGATGCCATTAA+AGG | 0.366672 | 3.2:-86658183 | None:intergenic |
| AACATTCTTGAAAACATAAT+AGG | 0.371862 | 3.2:-86659087 | None:intergenic |
| TGTTCTACAAACCTTGATTT+GGG | 0.374332 | 3.2:-86658051 | None:intergenic |
| GCTTAGAATACACTGATCTT+AGG | 0.375626 | 3.2:-86658029 | None:intergenic |
| CTGTATCTGCCTGGGCCAGT+AGG | 0.376769 | 3.2:-86659570 | None:intergenic |
| AGTAGTGTGGCTTCTTCTAA+TGG | 0.385108 | 3.2:+86659825 | MS.gene014981:CDS |
| TGCATCTACCAAAATCTTCA+TGG | 0.385620 | 3.2:-86658949 | None:intergenic |
| TAGTCGCTAGTCTCTTATGC+TGG | 0.386965 | 3.2:-86658263 | None:intergenic |
| CTTTCAAGAGTTTGGGGAGA+AGG | 0.394006 | 3.2:+86660511 | MS.gene014981:CDS |
| GGTGAATAAGAGTTCCTATA+AGG | 0.395222 | 3.2:-86658153 | None:intergenic |
| TCAACCCATGATCATGATCT+TGG | 0.398144 | 3.2:-86657861 | None:intergenic |
| AGAGAAAGAGGTTATTGATA+TGG | 0.399291 | 3.2:+86658884 | MS.gene014981:CDS |
| ATAATTGCTAATTGGTTTAG+TGG | 0.405746 | 3.2:-86660166 | None:intergenic |
| TCAGTTTAGTTCTCCTTACA+TGG | 0.405836 | 3.2:+86658553 | MS.gene014981:CDS |
| TAATTAGCCCTGTATCTGCC+TGG | 0.406972 | 3.2:-86659579 | None:intergenic |
| GATGCCATTAAAGGTGTTCT+AGG | 0.410220 | 3.2:-86658174 | None:intergenic |
| CATTTGTAGCAGGAACTTGT+GGG | 0.411786 | 3.2:-86657981 | None:intergenic |
| GGAGTTTAGGGCTTTGGAGG+TGG | 0.414476 | 3.2:+86658376 | MS.gene014981:CDS |
| ATCCTGACGAAATCATTTAT+AGG | 0.416707 | 3.2:+86658220 | MS.gene014981:CDS |
| TGTATCTGCCTGGGCCAGTA+GGG | 0.421172 | 3.2:-86659569 | None:intergenic |
| TTAGTGGCGAGGGCAGAGTT+TGG | 0.428516 | 3.2:-86660150 | None:intergenic |
| TGCCTATAAATGATTTCGTC+AGG | 0.429312 | 3.2:-86658222 | None:intergenic |
| AACAATGTGCATGAACCATT+TGG | 0.430283 | 3.2:-86658439 | None:intergenic |
| TTTGGAGTTTAGGGCTTTGG+AGG | 0.436552 | 3.2:+86658373 | MS.gene014981:CDS |
| TATGTTCTGCAGACTCTCTC+CGG | 0.438869 | 3.2:+86658771 | MS.gene014981:CDS |
| GAGTCTGCAGAACATATTGA+TGG | 0.441671 | 3.2:-86658764 | None:intergenic |
| ATGGAAGAGGCTGGGAAAAT+CGG | 0.443550 | 3.2:+86658804 | MS.gene014981:CDS |
| GGTTGAAAGTATAGAGTTCT+CGG | 0.444414 | 3.2:+86660206 | MS.gene014981:CDS |
| TCATTTGTAGCAGGAACTTG+TGG | 0.446523 | 3.2:-86657982 | None:intergenic |
| TTGGCTTGTTAGTTACCAAA+TGG | 0.451486 | 3.2:+86658424 | MS.gene014981:CDS |
| CTTGAAGCTTAATAATGAAA+AGG | 0.456438 | 3.2:+86660119 | MS.gene014981:CDS |
| GGCGTGGACCATGAAGATTT+TGG | 0.456683 | 3.2:+86658941 | MS.gene014981:CDS |
| ATCAAGTGAATTAGAGATTG+TGG | 0.457488 | 3.2:-86658991 | None:intergenic |
| CTAAAAGGGTCTCATCAATA+GGG | 0.461269 | 3.2:-86658080 | None:intergenic |
| GGCGATCGATGTGTTGTAGA+TGG | 0.464642 | 3.2:+86659979 | MS.gene014981:CDS |
| GTGTGTCGTGGGTATCTTGT+TGG | 0.466820 | 3.2:+86658314 | MS.gene014981:CDS |
| CGGAGAGGAATCCACAATAC+TGG | 0.472256 | 3.2:+86660405 | MS.gene014981:CDS |
| AGTAACATTCTCTTCTAAAA+GGG | 0.482726 | 3.2:-86658094 | None:intergenic |
| CTCTTCCATTAGTGGAGGCC+CGG | 0.490275 | 3.2:-86658790 | None:intergenic |
| CATGACCAAGATCATGATCA+TGG | 0.492732 | 3.2:+86657856 | MS.gene014981:CDS |
| ACTGTGCTTCTCCTGAGATA+AGG | 0.493811 | 3.2:+86657935 | MS.gene014981:CDS |
| CAATTAAACAAGCTTGTGAC+AGG | 0.494751 | 3.2:+86659781 | MS.gene014981:CDS |
| CTTCCTTAATCATGAATCTA+CGG | 0.496022 | 3.2:-86659528 | None:intergenic |
| AAATGTAAATAAGATTAAGA+TGG | 0.497083 | 3.2:+86660463 | MS.gene014981:CDS |
| GCATAAGAGACTAGCGACTA+AGG | 0.497296 | 3.2:+86658266 | MS.gene014981:CDS |
| TGTATTTCCCCTACTGGCCC+AGG | 0.497804 | 3.2:+86659561 | MS.gene014981:CDS |
| AGTCGCTAGTCTCTTATGCT+GGG | 0.498583 | 3.2:-86658262 | None:intergenic |
| TTGCGGCTAATTTAGATCGC+TGG | 0.498595 | 3.2:-86658599 | None:intergenic |
| TCCAGGTTCTTCTTCTGGTG+AGG | 0.503770 | 3.2:+86658197 | MS.gene014981:CDS |
| CATCGATCGCCAACATCGAA+TGG | 0.504479 | 3.2:-86659967 | None:intergenic |
| AATGTAAATAAGATTAAGAT+GGG | 0.505449 | 3.2:+86660464 | MS.gene014981:CDS |
| CCTCCACTAATGGAAGAGGC+TGG | 0.505601 | 3.2:+86658795 | MS.gene014981:CDS |
| TTCATGTTTGTGTGTGTCGT+GGG | 0.518234 | 3.2:+86658303 | MS.gene014981:CDS |
| TTGAACTCCCGAAACTAAAA+CGG | 0.519838 | 3.2:-86658845 | None:intergenic |
| CTTGGGGTGAACCTTATCTC+AGG | 0.520160 | 3.2:-86657946 | None:intergenic |
| CATTACAAACACAAAGATGA+TGG | 0.521560 | 3.2:-86659941 | None:intergenic |
| CTATATTCTTACTTGCAACA+AGG | 0.521854 | 3.2:-86659119 | None:intergenic |
| TGGGTTGAAGCAATGTGTCC+AGG | 0.522262 | 3.2:+86658518 | MS.gene014981:CDS |
| TGTATTCTAAGCCCAAATCA+AGG | 0.522553 | 3.2:+86658040 | MS.gene014981:CDS |
| AACTGATCCAAATGAAAACC+TGG | 0.523400 | 3.2:-86658536 | None:intergenic |
| ATCGGCAGATCTCAAAGTAT+TGG | 0.525382 | 3.2:+86658822 | MS.gene014981:CDS |
| TCATCACAGCTAGTACTAGC+GGG | 0.526862 | 3.2:+86659880 | MS.gene014981:CDS |
| TCGGAAAAGTGAACTAGTGA+TGG | 0.532064 | 3.2:+86660538 | MS.gene014981:CDS |
| AAATTAGGATGCCAGTATTG+TGG | 0.533187 | 3.2:-86660416 | None:intergenic |
| GCCAGTAGGGGAAATACAAA+AGG | 0.533230 | 3.2:-86659556 | None:intergenic |
| TGATAAATAGTACCCATGTA+AGG | 0.534123 | 3.2:-86658566 | None:intergenic |
| TCCTCACCAGAAGAAGAACC+TGG | 0.538196 | 3.2:-86658198 | None:intergenic |
| GATGAACACCTTGTGGAAGA+AGG | 0.541949 | 3.2:-86660601 | None:intergenic |
| CGGGCCTCCACTAATGGAAG+AGG | 0.542792 | 3.2:+86658791 | MS.gene014981:CDS |
| ACACCTTTAATGGCATCTCC+AGG | 0.542913 | 3.2:+86658180 | MS.gene014981:CDS |
| TGCTAATTGGTTTAGTGGCG+AGG | 0.543238 | 3.2:-86660161 | None:intergenic |
| CCAGCCTCTTCCATTAGTGG+AGG | 0.543767 | 3.2:-86658795 | None:intergenic |
| GAGGTGGTGTATGCTTGTGA+TGG | 0.544535 | 3.2:+86658392 | MS.gene014981:CDS |
| TAAAGAAATTACTAATGAGA+TGG | 0.545783 | 3.2:+86659049 | MS.gene014981:CDS |
| CTCCACTAATGGAAGAGGCT+GGG | 0.547360 | 3.2:+86658796 | MS.gene014981:CDS |
| GTTCATGTTTGTGTGTGTCG+TGG | 0.551999 | 3.2:+86658302 | MS.gene014981:CDS |
| GGACACATTGCTTCAACCCA+TGG | 0.552760 | 3.2:-86658515 | None:intergenic |
| AATTAGCCCTGTATCTGCCT+GGG | 0.553573 | 3.2:-86659578 | None:intergenic |
| ATGTTCTGCAGACTCTCTCC+GGG | 0.553700 | 3.2:+86658772 | MS.gene014981:CDS |
| CTGGCATCCTAATTTCAGCT+TGG | 0.555043 | 3.2:+86660424 | MS.gene014981:CDS |
| ATTTGTAGCAGGAACTTGTG+GGG | 0.558637 | 3.2:-86657980 | None:intergenic |
| TAAAGGTGGCACAGAGAAAG+AGG | 0.562858 | 3.2:+86658872 | MS.gene014981:CDS |
| GTAATGCATCCATTCGATGT+TGG | 0.562974 | 3.2:+86659958 | MS.gene014981:CDS |
| GATGGTAACAATAAGCATCA+AGG | 0.568612 | 3.2:+86657760 | MS.gene014981:CDS |
| TATATTCTTACTTGCAACAA+GGG | 0.569030 | 3.2:-86659118 | None:intergenic |
| TAGATGCAGTGATGAATTCA+AGG | 0.569731 | 3.2:+86658964 | MS.gene014981:CDS |
| CATGATCATGATCTTGGTCA+TGG | 0.572577 | 3.2:-86657855 | None:intergenic |
| AGGTGGTGAAGTAAACATGA+TGG | 0.572945 | 3.2:+86657780 | MS.gene014981:CDS |
| TTTGTAGCAGGAACTTGTGG+GGG | 0.574718 | 3.2:-86657979 | None:intergenic |
| AGTTTGGGGAGAAGGTGAAT+CGG | 0.586028 | 3.2:+86660519 | MS.gene014981:CDS |
| TTATCAAGAACGTAAAGCAC+TGG | 0.590875 | 3.2:+86659723 | MS.gene014981:CDS |
| CAGTTTAGTTCTCCTTACAT+GGG | 0.590938 | 3.2:+86658554 | MS.gene014981:CDS |
| TGCTTAGGTTGATGAATGGA+TGG | 0.601864 | 3.2:+86657742 | None:intergenic |
| GCTAATTGGTTTAGTGGCGA+GGG | 0.603953 | 3.2:-86660160 | None:intergenic |
| GTATCTGCCTGGGCCAGTAG+GGG | 0.605173 | 3.2:-86659568 | None:intergenic |
| GATCAAAGAAAGATTTGACA+TGG | 0.605754 | 3.2:-86658722 | None:intergenic |
| GGTTTCTGAATGATGTAACA+TGG | 0.606401 | 3.2:+86658622 | MS.gene014981:CDS |
| AAAGTCTTTAGCAGATTGGG+TGG | 0.609117 | 3.2:+86659606 | MS.gene014981:CDS |
| CTCATCACAGCTAGTACTAG+CGG | 0.611663 | 3.2:+86659879 | MS.gene014981:CDS |
| ATGACCAAGATCATGATCAT+GGG | 0.612435 | 3.2:+86657857 | MS.gene014981:CDS |
| AGCGATCTAAATTAGCCGCA+AGG | 0.612871 | 3.2:+86658601 | MS.gene014981:CDS |
| AATTAAACAAGCTTGTGACA+GGG | 0.617603 | 3.2:+86659782 | MS.gene014981:CDS |
| TACATCATTCAGAAACCTTG+CGG | 0.619295 | 3.2:-86658616 | None:intergenic |
| CTAGTACTAGCTGTGATGAG+AGG | 0.620783 | 3.2:-86659876 | None:intergenic |
| GGGAGTTCAACTGTTAAAGG+TGG | 0.622194 | 3.2:+86658858 | MS.gene014981:CDS |
| GGTGGTGTCAATTTCAAATG+TGG | 0.624592 | 3.2:+86657819 | MS.gene014981:CDS |
| GATGGAGAAGAAAAGAGAAG+TGG | 0.625504 | 3.2:+86657798 | MS.gene014981:CDS |
| TGTGACAGGGGTCTTAGTAG+TGG | 0.625559 | 3.2:+86659795 | MS.gene014981:CDS |
| GGTACTATTTATCAATCATG+AGG | 0.633489 | 3.2:+86658575 | MS.gene014981:CDS |
| GATGAAGCAAGAGAAAGTCT+CGG | 0.637612 | 3.2:+86658920 | MS.gene014981:CDS |
| ATTAAACAAGCTTGTGACAG+GGG | 0.640205 | 3.2:+86659783 | MS.gene014981:CDS |
| ATATTCTTACTTGCAACAAG+GGG | 0.645688 | 3.2:-86659117 | None:intergenic |
| TATCTGAGATGAACACCTTG+TGG | 0.649979 | 3.2:-86660608 | None:intergenic |
| GGAGAAGAAAAGAGAAGTGG+TGG | 0.653179 | 3.2:+86657801 | MS.gene014981:CDS |
| TAACAGCTGAGGAACTGAGA+AGG | 0.655836 | 3.2:+86658343 | MS.gene014981:CDS |
| TACTGGCCCAGGCAGATACA+GGG | 0.658380 | 3.2:+86659572 | MS.gene014981:CDS |
| AATGAACTTTCAAGAGTTTG+GGG | 0.659127 | 3.2:+86660505 | MS.gene014981:CDS |
| GTGGTGTCAATTTCAAATGT+GGG | 0.661574 | 3.2:+86657820 | MS.gene014981:CDS |
| AGCAAGAGAAAGTCTCGGCG+TGG | 0.668540 | 3.2:+86658925 | MS.gene014981:CDS |
| GTTGGCTAGCATAACAGCTG+AGG | 0.671221 | 3.2:+86658332 | MS.gene014981:CDS |
| ATGTGTTGTAGATGGTGTTG+AGG | 0.674889 | 3.2:+86659987 | MS.gene014981:CDS |
| TAGTGGTGAGCATAGTAGTG+TGG | 0.676510 | 3.2:+86659812 | MS.gene014981:CDS |
| CATCACAGCTAGTACTAGCG+GGG | 0.699530 | 3.2:+86659881 | MS.gene014981:CDS |
| AGATACAGCCTTCTTCCACA+AGG | 0.711384 | 3.2:+86660593 | MS.gene014981:CDS |
| GGTAACAATAAGCATCAAGG+TGG | 0.751134 | 3.2:+86657763 | MS.gene014981:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAAAAAAAAAAAAAAAT+AGG | + | chr3.2:86660378-86660397 | MS.gene014981:intron | 0.0% |
| !! | AAATGTAAATAAGATTAAGA+TGG | + | chr3.2:86660463-86660482 | MS.gene014981:CDS | 15.0% |
| !! | AATGTAAATAAGATTAAGAT+GGG | + | chr3.2:86660464-86660483 | MS.gene014981:CDS | 15.0% |
| !!! | ATTAATTTGTATATCCAATT+TGG | + | chr3.2:86659406-86659425 | MS.gene014981:intron | 15.0% |
| !!! | TTAATTTGTATATCCAATTT+GGG | + | chr3.2:86659407-86659426 | MS.gene014981:intron | 15.0% |
| !! | AAAAAAAAAAAATAGGTACG+CGG | + | chr3.2:86660385-86660404 | MS.gene014981:intron | 20.0% |
| !! | AACATTCTTGAAAACATAAT+AGG | - | chr3.2:86659090-86659109 | None:intergenic | 20.0% |
| !! | TAAAGAAATTACTAATGAGA+TGG | + | chr3.2:86659049-86659068 | MS.gene014981:CDS | 20.0% |
| !! | TCAAATAAGTCAATGTAAAT+AGG | - | chr3.2:86659221-86659240 | None:intergenic | 20.0% |
| !! | TTTATACATAATCACTCATA+TGG | + | chr3.2:86659373-86659392 | MS.gene014981:intron | 20.0% |
| !!! | ATAGAATATGCATCATTTTT+TGG | + | chr3.2:86659138-86659157 | MS.gene014981:intron | 20.0% |
| !!! | GAAAAGTTTTATCACAAATT+TGG | + | chr3.2:86660294-86660313 | MS.gene014981:intron | 20.0% |
| !!! | TAGAATATGCATCATTTTTT+GGG | + | chr3.2:86659139-86659158 | MS.gene014981:intron | 20.0% |
| !!! | TGTTTGTATTTTTCAGTTAA+AGG | + | chr3.2:86659699-86659718 | MS.gene014981:intron | 20.0% |
| ! | AGTTATCATCATCATAATGA+AGG | + | chr3.2:86659652-86659671 | MS.gene014981:intron | 25.0% |
| ! | CTATACTTTCAACCATATTT+GGG | - | chr3.2:86660200-86660219 | None:intergenic | 25.0% |
| ! | CTTCTGTAATAATTGCTAAT+TGG | - | chr3.2:86660177-86660196 | None:intergenic | 25.0% |
| ! | CTTGAAGCTTAATAATGAAA+AGG | + | chr3.2:86660119-86660138 | MS.gene014981:CDS | 25.0% |
| ! | TAGCTAATGAAAACAACTTA+TGG | + | chr3.2:86659329-86659348 | MS.gene014981:intron | 25.0% |
| ! | TAGTAACATTCTCTTCTAAA+AGG | - | chr3.2:86658098-86658117 | None:intergenic | 25.0% |
| ! | TATATTCTTACTTGCAACAA+GGG | - | chr3.2:86659121-86659140 | None:intergenic | 25.0% |
| ! | TATTGATGCATTGAATTATC+TGG | + | chr3.2:86660055-86660074 | MS.gene014981:intron | 25.0% |
| ! | TCTATACTTTCAACCATATT+TGG | - | chr3.2:86660201-86660220 | None:intergenic | 25.0% |
| !! | AGTAACATTCTCTTCTAAAA+GGG | - | chr3.2:86658097-86658116 | None:intergenic | 25.0% |
| !! | ATAATTGCTAATTGGTTTAG+TGG | - | chr3.2:86660169-86660188 | None:intergenic | 25.0% |
| !! | GAACTTTTTGTTGAAGAAAA+AGG | + | chr3.2:86658479-86658498 | MS.gene014981:CDS | 25.0% |
| !!! | AGAATATGCATCATTTTTTG+GGG | + | chr3.2:86659140-86659159 | MS.gene014981:intron | 25.0% |
| !!! | AGAGTTATTGTTGCTTTTAA+GGG | + | chr3.2:86659195-86659214 | MS.gene014981:intron | 25.0% |
| !!! | ATAAGTTGTTTTCATTAGCT+AGG | - | chr3.2:86659330-86659349 | None:intergenic | 25.0% |
| !!! | TAGAGTTATTGTTGCTTTTA+AGG | + | chr3.2:86659194-86659213 | MS.gene014981:intron | 25.0% |
| !!! | TTTTAGAAGAGAATGTTACT+AGG | + | chr3.2:86658097-86658116 | MS.gene014981:CDS | 25.0% |
| AACTGAGAAGGATACATATT+TGG | + | chr3.2:86658355-86658374 | MS.gene014981:CDS | 30.0% | |
| AATGAACTTTCAAGAGTTTG+GGG | + | chr3.2:86660505-86660524 | MS.gene014981:CDS | 30.0% | |
| AATGTCCCTATTCATAAAGA+GGG | - | chr3.2:86659494-86659513 | None:intergenic | 30.0% | |
| AATTAAACAAGCTTGTGACA+GGG | + | chr3.2:86659782-86659801 | MS.gene014981:CDS | 30.0% | |
| ACAAACATTATAGTCGAAAC+AGG | - | chr3.2:86659686-86659705 | None:intergenic | 30.0% | |
| ACAATGAACTTTCAAGAGTT+TGG | + | chr3.2:86660503-86660522 | MS.gene014981:CDS | 30.0% | |
| AGAGAAAGAGGTTATTGATA+TGG | + | chr3.2:86658884-86658903 | MS.gene014981:CDS | 30.0% | |
| ATATACATTTAGGCCCAAAT+TGG | - | chr3.2:86659423-86659442 | None:intergenic | 30.0% | |
| ATATTCTTACTTGCAACAAG+GGG | - | chr3.2:86659120-86659139 | None:intergenic | 30.0% | |
| ATCAAGTGAATTAGAGATTG+TGG | - | chr3.2:86658994-86659013 | None:intergenic | 30.0% | |
| ATCCTGACGAAATCATTTAT+AGG | + | chr3.2:86658220-86658239 | MS.gene014981:CDS | 30.0% | |
| ATTACTACCAAGCTGAAATT+AGG | - | chr3.2:86660434-86660453 | None:intergenic | 30.0% | |
| CAAAAAGTCTTTAGCAGATT+GGG | + | chr3.2:86659603-86659622 | MS.gene014981:CDS | 30.0% | |
| CAATGAACTTTCAAGAGTTT+GGG | + | chr3.2:86660504-86660523 | MS.gene014981:CDS | 30.0% | |
| CACTGAAAGAAAAAATAACG+AGG | + | chr3.2:86660262-86660281 | MS.gene014981:CDS | 30.0% | |
| CATTACAAACACAAAGATGA+TGG | - | chr3.2:86659944-86659963 | None:intergenic | 30.0% | |
| CTATATTCTTACTTGCAACA+AGG | - | chr3.2:86659122-86659141 | None:intergenic | 30.0% | |
| CTTCCTTAATCATGAATCTA+CGG | - | chr3.2:86659531-86659550 | None:intergenic | 30.0% | |
| GATCAAAGAAAGATTTGACA+TGG | - | chr3.2:86658725-86658744 | None:intergenic | 30.0% | |
| GATGTAAAAAATGAACGAAC+TGG | + | chr3.2:86659026-86659045 | MS.gene014981:CDS | 30.0% | |
| GGTACTATTTATCAATCATG+AGG | + | chr3.2:86658575-86658594 | MS.gene014981:CDS | 30.0% | |
| GTATATCAAAACAAGGAGAA+GGG | - | chr3.2:86659447-86659466 | None:intergenic | 30.0% | |
| TGATAAATAGTACCCATGTA+AGG | - | chr3.2:86658569-86658588 | None:intergenic | 30.0% | |
| TGTTCTACAAACCTTGATTT+GGG | - | chr3.2:86658054-86658073 | None:intergenic | 30.0% | |
| TTATTACAGAAGCCCAAATA+TGG | + | chr3.2:86660185-86660204 | MS.gene014981:CDS | 30.0% | |
| TTGTTCTACAAACCTTGATT+TGG | - | chr3.2:86658055-86658074 | None:intergenic | 30.0% | |
| ! | AGGATACATATTTGGAGTTT+AGG | + | chr3.2:86658363-86658382 | MS.gene014981:CDS | 30.0% |
| ! | GGATACATATTTGGAGTTTA+GGG | + | chr3.2:86658364-86658383 | MS.gene014981:CDS | 30.0% |
| !!! | GAATATGCATCATTTTTTGG+GGG | + | chr3.2:86659141-86659160 | MS.gene014981:intron | 30.0% |
| AAATTAGGATGCCAGTATTG+TGG | - | chr3.2:86660419-86660438 | None:intergenic | 35.0% | |
| AACAATGTGCATGAACCATT+TGG | - | chr3.2:86658442-86658461 | None:intergenic | 35.0% | |
| AACTGATCCAAATGAAAACC+TGG | - | chr3.2:86658539-86658558 | None:intergenic | 35.0% | |
| AATGTGCCCTCTTTATGAAT+AGG | + | chr3.2:86659485-86659504 | MS.gene014981:intron | 35.0% | |
| ACAAAAATGCTCCAATGAGA+AGG | - | chr3.2:86658659-86658678 | None:intergenic | 35.0% | |
| ACTCCGTAGATTCATGATTA+AGG | + | chr3.2:86659525-86659544 | MS.gene014981:CDS | 35.0% | |
| ATGACCAAGATCATGATCAT+GGG | + | chr3.2:86657857-86657876 | MS.gene014981:CDS | 35.0% | |
| ATGTGCCCTCTTTATGAATA+GGG | + | chr3.2:86659486-86659505 | MS.gene014981:intron | 35.0% | |
| ATTAAACAAGCTTGTGACAG+GGG | + | chr3.2:86659783-86659802 | MS.gene014981:CDS | 35.0% | |
| CAAAAATGCTCCAATGAGAA+GGG | - | chr3.2:86658658-86658677 | None:intergenic | 35.0% | |
| CAATGTCCCTATTCATAAAG+AGG | - | chr3.2:86659495-86659514 | None:intergenic | 35.0% | |
| CAATTAAACAAGCTTGTGAC+AGG | + | chr3.2:86659781-86659800 | MS.gene014981:CDS | 35.0% | |
| CATTTGAGAGAACTTGTATC+AGG | - | chr3.2:86660641-86660660 | None:intergenic | 35.0% | |
| CCAAAAAGTCTTTAGCAGAT+TGG | + | chr3.2:86659602-86659621 | MS.gene014981:CDS | 35.0% | |
| CTAAAAGGGTCTCATCAATA+GGG | - | chr3.2:86658083-86658102 | None:intergenic | 35.0% | |
| CTGTATACACATTTGTGAGA+CGG | + | chr3.2:86659258-86659277 | MS.gene014981:intron | 35.0% | |
| GAGAGTGGTATATCAAAACA+AGG | - | chr3.2:86659454-86659473 | None:intergenic | 35.0% | |
| GATGGTAACAATAAGCATCA+AGG | + | chr3.2:86657760-86657779 | MS.gene014981:CDS | 35.0% | |
| GCTTAGAATACACTGATCTT+AGG | - | chr3.2:86658032-86658051 | None:intergenic | 35.0% | |
| GGTATATCAAAACAAGGAGA+AGG | - | chr3.2:86659448-86659467 | None:intergenic | 35.0% | |
| GGTGAATAAGAGTTCCTATA+AGG | - | chr3.2:86658156-86658175 | None:intergenic | 35.0% | |
| GGTTTCTGAATGATGTAACA+TGG | + | chr3.2:86658622-86658641 | MS.gene014981:CDS | 35.0% | |
| TACATCATTCAGAAACCTTG+CGG | - | chr3.2:86658619-86658638 | None:intergenic | 35.0% | |
| TAGATGCAGTGATGAATTCA+AGG | + | chr3.2:86658964-86658983 | MS.gene014981:CDS | 35.0% | |
| TCTAAAAGGGTCTCATCAAT+AGG | - | chr3.2:86658084-86658103 | None:intergenic | 35.0% | |
| TGCATCTACCAAAATCTTCA+TGG | - | chr3.2:86658952-86658971 | None:intergenic | 35.0% | |
| TGCCTATAAATGATTTCGTC+AGG | - | chr3.2:86658225-86658244 | None:intergenic | 35.0% | |
| TGTATTCTAAGCCCAAATCA+AGG | + | chr3.2:86658040-86658059 | MS.gene014981:CDS | 35.0% | |
| TTATCAAGAACGTAAAGCAC+TGG | + | chr3.2:86659723-86659742 | MS.gene014981:CDS | 35.0% | |
| TTCACCTAGAACACCTTTAA+TGG | + | chr3.2:86658170-86658189 | MS.gene014981:CDS | 35.0% | |
| TTGAACTCCCGAAACTAAAA+CGG | - | chr3.2:86658848-86658867 | None:intergenic | 35.0% | |
| TTGAATTATCTGGCAGCTAT+TGG | + | chr3.2:86660065-86660084 | MS.gene014981:intron | 35.0% | |
| ! | AATGTGTCCAGGTTTTCATT+TGG | + | chr3.2:86658529-86658548 | MS.gene014981:CDS | 35.0% |
| ! | ATATTTGGAGTTTAGGGCTT+TGG | + | chr3.2:86658370-86658389 | MS.gene014981:CDS | 35.0% |
| ! | CCAATCTGCTAAAGACTTTT+TGG | - | chr3.2:86659605-86659624 | None:intergenic | 35.0% |
| ! | GGTTGAAAGTATAGAGTTCT+CGG | + | chr3.2:86660206-86660225 | MS.gene014981:CDS | 35.0% |
| ! | GTAAGGTTTTCATTTGTAGC+AGG | - | chr3.2:86657994-86658013 | None:intergenic | 35.0% |
| ! | GTGGTGTCAATTTCAAATGT+GGG | + | chr3.2:86657820-86657839 | MS.gene014981:CDS | 35.0% |
| !! | CAGTTTAGTTCTCCTTACAT+GGG | + | chr3.2:86658554-86658573 | MS.gene014981:CDS | 35.0% |
| !! | TCAGTTTAGTTCTCCTTACA+TGG | + | chr3.2:86658553-86658572 | MS.gene014981:CDS | 35.0% |
| !! | TCTCATTGGAGCATTTTTGT+GGG | + | chr3.2:86658659-86658678 | MS.gene014981:CDS | 35.0% |
| !! | TTCTCATTGGAGCATTTTTG+TGG | + | chr3.2:86658658-86658677 | MS.gene014981:CDS | 35.0% |
| !! | TTGGCTTGTTAGTTACCAAA+TGG | + | chr3.2:86658424-86658443 | MS.gene014981:CDS | 35.0% |
| !!! | AAGGTGCTTTATTTTGTCCA+TGG | + | chr3.2:86658498-86658517 | MS.gene014981:CDS | 35.0% |
| !!! | AGGTGCTTTATTTTGTCCAT+GGG | + | chr3.2:86658499-86658518 | MS.gene014981:CDS | 35.0% |
| !!! | AGTATTGGCCGTTTTAGTTT+CGG | + | chr3.2:86658837-86658856 | MS.gene014981:CDS | 35.0% |
| !!! | CTTGTGATGGTGACATTTTT+TGG | + | chr3.2:86658405-86658424 | MS.gene014981:CDS | 35.0% |
| AAAAAAATAGGTACGCGGAG+AGG | + | chr3.2:86660390-86660409 | MS.gene014981:intron | 40.0% | |
| AAAGTCTTTAGCAGATTGGG+TGG | + | chr3.2:86659606-86659625 | MS.gene014981:CDS | 40.0% | |
| AGGTGGTGAAGTAAACATGA+TGG | + | chr3.2:86657780-86657799 | MS.gene014981:CDS | 40.0% | |
| AGTAGTGTGGCTTCTTCTAA+TGG | + | chr3.2:86659825-86659844 | MS.gene014981:CDS | 40.0% | |
| ATCGGCAGATCTCAAAGTAT+TGG | + | chr3.2:86658822-86658841 | MS.gene014981:CDS | 40.0% | |
| ATTTGTAGCAGGAACTTGTG+GGG | - | chr3.2:86657983-86658002 | None:intergenic | 40.0% | |
| CATGACCAAGATCATGATCA+TGG | + | chr3.2:86657856-86657875 | MS.gene014981:CDS | 40.0% | |
| CATGATCATGATCTTGGTCA+TGG | - | chr3.2:86657858-86657877 | None:intergenic | 40.0% | |
| CATTTGTAGCAGGAACTTGT+GGG | - | chr3.2:86657984-86658003 | None:intergenic | 40.0% | |
| GAGTCTGCAGAACATATTGA+TGG | - | chr3.2:86658767-86658786 | None:intergenic | 40.0% | |
| GATGAAGCAAGAGAAAGTCT+CGG | + | chr3.2:86658920-86658939 | MS.gene014981:CDS | 40.0% | |
| GATGGAGAAGAAAAGAGAAG+TGG | + | chr3.2:86657798-86657817 | MS.gene014981:CDS | 40.0% | |
| GGTAACAATAAGCATCAAGG+TGG | + | chr3.2:86657763-86657782 | MS.gene014981:CDS | 40.0% | |
| GTAATGCATCCATTCGATGT+TGG | + | chr3.2:86659958-86659977 | MS.gene014981:CDS | 40.0% | |
| TCAACCCATGATCATGATCT+TGG | - | chr3.2:86657864-86657883 | None:intergenic | 40.0% | |
| TCATTTGTAGCAGGAACTTG+TGG | - | chr3.2:86657985-86658004 | None:intergenic | 40.0% | |
| TCGGAAAAGTGAACTAGTGA+TGG | + | chr3.2:86660538-86660557 | MS.gene014981:CDS | 40.0% | |
| TTCATGTTTGTGTGTGTCGT+GGG | + | chr3.2:86658303-86658322 | MS.gene014981:CDS | 40.0% | |
| TTCGGGAGTTCAACTGTTAA+AGG | + | chr3.2:86658855-86658874 | MS.gene014981:CDS | 40.0% | |
| ! | ACTCTTGTTTCCCTTCTCAT+TGG | + | chr3.2:86658645-86658664 | MS.gene014981:CDS | 40.0% |
| ! | ATGTGTTGTAGATGGTGTTG+AGG | + | chr3.2:86659987-86660006 | MS.gene014981:CDS | 40.0% |
| ! | CAGCTGTTACTTCACCTTAT+AGG | + | chr3.2:86658139-86658158 | MS.gene014981:CDS | 40.0% |
| ! | GGAGAAGGGCATATACATTT+AGG | - | chr3.2:86659433-86659452 | None:intergenic | 40.0% |
| ! | GGTGGTGTCAATTTCAAATG+TGG | + | chr3.2:86657819-86657838 | MS.gene014981:CDS | 40.0% |
| ! | TATCTGAGATGAACACCTTG+TGG | - | chr3.2:86660611-86660630 | None:intergenic | 40.0% |
| ! | TCCTTTTGTATTTCCCCTAC+TGG | + | chr3.2:86659555-86659574 | MS.gene014981:CDS | 40.0% |
| ! | TCTTAGGAGAGTTTTTCTCG+TGG | - | chr3.2:86658016-86658035 | None:intergenic | 40.0% |
| !! | CATTTTAGCAACAACGAGAG+TGG | - | chr3.2:86659469-86659488 | None:intergenic | 40.0% |
| !! | GATGCCATTAAAGGTGTTCT+AGG | - | chr3.2:86658177-86658196 | None:intergenic | 40.0% |
| !!! | GACACTGTTGCTATCGATTT+TGG | + | chr3.2:86658689-86658708 | MS.gene014981:CDS | 40.0% |
| !!! | GTATTGGCCGTTTTAGTTTC+GGG | + | chr3.2:86658838-86658857 | MS.gene014981:CDS | 40.0% |
| AATTAGCCCTGTATCTGCCT+GGG | - | chr3.2:86659581-86659600 | None:intergenic | 45.0% | |
| ACACCTTTAATGGCATCTCC+AGG | + | chr3.2:86658180-86658199 | MS.gene014981:CDS | 45.0% | |
| ACGACACCAGCAGAGAAAAT+TGG | + | chr3.2:86660237-86660256 | MS.gene014981:CDS | 45.0% | |
| ACTGTGCTTCTCCTGAGATA+AGG | + | chr3.2:86657935-86657954 | MS.gene014981:CDS | 45.0% | |
| AGATACAGCCTTCTTCCACA+AGG | + | chr3.2:86660593-86660612 | MS.gene014981:CDS | 45.0% | |
| AGCGATCTAAATTAGCCGCA+AGG | + | chr3.2:86658601-86658620 | MS.gene014981:CDS | 45.0% | |
| AGTTTGGGGAGAAGGTGAAT+CGG | + | chr3.2:86660519-86660538 | MS.gene014981:CDS | 45.0% | |
| ATGGAAGAGGCTGGGAAAAT+CGG | + | chr3.2:86658804-86658823 | MS.gene014981:CDS | 45.0% | |
| CTAGTACTAGCTGTGATGAG+AGG | - | chr3.2:86659879-86659898 | None:intergenic | 45.0% | |
| CTCATCACAGCTAGTACTAG+CGG | + | chr3.2:86659879-86659898 | MS.gene014981:CDS | 45.0% | |
| CTGGCATCCTAATTTCAGCT+TGG | + | chr3.2:86660424-86660443 | MS.gene014981:CDS | 45.0% | |
| CTTTAGCAGATTGGGTGGTA+AGG | + | chr3.2:86659611-86659630 | MS.gene014981:intron | 45.0% | |
| CTTTCAAGAGTTTGGGGAGA+AGG | + | chr3.2:86660511-86660530 | MS.gene014981:CDS | 45.0% | |
| GAACCTGGAGATGCCATTAA+AGG | - | chr3.2:86658186-86658205 | None:intergenic | 45.0% | |
| GATGAACACCTTGTGGAAGA+AGG | - | chr3.2:86660604-86660623 | None:intergenic | 45.0% | |
| GCATAAGAGACTAGCGACTA+AGG | + | chr3.2:86658266-86658285 | MS.gene014981:CDS | 45.0% | |
| GCCAGTAGGGGAAATACAAA+AGG | - | chr3.2:86659559-86659578 | None:intergenic | 45.0% | |
| GGAGAAGAAAAGAGAAGTGG+TGG | + | chr3.2:86657801-86657820 | MS.gene014981:CDS | 45.0% | |
| GGGAGTTCAACTGTTAAAGG+TGG | + | chr3.2:86658858-86658877 | MS.gene014981:CDS | 45.0% | |
| GTTCATGTTTGTGTGTGTCG+TGG | + | chr3.2:86658302-86658321 | MS.gene014981:CDS | 45.0% | |
| TAAAGGTGGCACAGAGAAAG+AGG | + | chr3.2:86658872-86658891 | MS.gene014981:CDS | 45.0% | |
| TAACAGCTGAGGAACTGAGA+AGG | + | chr3.2:86658343-86658362 | MS.gene014981:CDS | 45.0% | |
| TAATTAGCCCTGTATCTGCC+TGG | - | chr3.2:86659582-86659601 | None:intergenic | 45.0% | |
| TAGTGGTGAGCATAGTAGTG+TGG | + | chr3.2:86659812-86659831 | MS.gene014981:CDS | 45.0% | |
| TATGTTCTGCAGACTCTCTC+CGG | + | chr3.2:86658771-86658790 | MS.gene014981:CDS | 45.0% | |
| TCATCACAGCTAGTACTAGC+GGG | + | chr3.2:86659880-86659899 | MS.gene014981:CDS | 45.0% | |
| TTGCGGCTAATTTAGATCGC+TGG | - | chr3.2:86658602-86658621 | None:intergenic | 45.0% | |
| TTTGTAGCAGGAACTTGTGG+GGG | - | chr3.2:86657982-86658001 | None:intergenic | 45.0% | |
| ! | AGTCGCTAGTCTCTTATGCT+GGG | - | chr3.2:86658265-86658284 | None:intergenic | 45.0% |
| ! | AGTGCTCCAATTTTCTCTGC+TGG | - | chr3.2:86660246-86660265 | None:intergenic | 45.0% |
| ! | GAACTTGTGGGGGTGTATTT+GGG | - | chr3.2:86657972-86657991 | None:intergenic | 45.0% |
| ! | GCTAATTGGTTTAGTGGCGA+GGG | - | chr3.2:86660163-86660182 | None:intergenic | 45.0% |
| ! | GGAGAGTTTTTCTCGTGGTA+AGG | - | chr3.2:86658011-86658030 | None:intergenic | 45.0% |
| ! | TAGTCGCTAGTCTCTTATGC+TGG | - | chr3.2:86658266-86658285 | None:intergenic | 45.0% |
| ! | TGCTAATTGGTTTAGTGGCG+AGG | - | chr3.2:86660164-86660183 | None:intergenic | 45.0% |
| ! | TTTGGAGTTTAGGGCTTTGG+AGG | + | chr3.2:86658373-86658392 | MS.gene014981:CDS | 45.0% |
| !! | AGCTGTTTTCGTGTCGCATA+AGG | - | chr3.2:86659755-86659774 | None:intergenic | 45.0% |
| ATGTTCTGCAGACTCTCTCC+GGG | + | chr3.2:86658772-86658791 | MS.gene014981:CDS | 50.0% | |
| CATCACAGCTAGTACTAGCG+GGG | + | chr3.2:86659881-86659900 | MS.gene014981:CDS | 50.0% | |
| CATCGATCGCCAACATCGAA+TGG | - | chr3.2:86659970-86659989 | None:intergenic | 50.0% | |
| CGGAGAGGAATCCACAATAC+TGG | + | chr3.2:86660405-86660424 | MS.gene014981:CDS | 50.0% | |
| CTCCACTAATGGAAGAGGCT+GGG | + | chr3.2:86658796-86658815 | MS.gene014981:CDS | 50.0% | |
| CTTGGGGTGAACCTTATCTC+AGG | - | chr3.2:86657949-86657968 | None:intergenic | 50.0% | |
| GAGGTGGTGTATGCTTGTGA+TGG | + | chr3.2:86658392-86658411 | MS.gene014981:CDS | 50.0% | |
| GCATCTCCAGGTTCTTCTTC+TGG | + | chr3.2:86658192-86658211 | MS.gene014981:CDS | 50.0% | |
| GGACACATTGCTTCAACCCA+TGG | - | chr3.2:86658518-86658537 | None:intergenic | 50.0% | |
| GGCGATCGATGTGTTGTAGA+TGG | + | chr3.2:86659979-86659998 | MS.gene014981:CDS | 50.0% | |
| GTACTAGCGGGGTTCATGTT+TGG | + | chr3.2:86659892-86659911 | MS.gene014981:CDS | 50.0% | |
| GTGTGTCGTGGGTATCTTGT+TGG | + | chr3.2:86658314-86658333 | MS.gene014981:CDS | 50.0% | |
| GTTGGCTAGCATAACAGCTG+AGG | + | chr3.2:86658332-86658351 | MS.gene014981:CDS | 50.0% | |
| TCCAGGTTCTTCTTCTGGTG+AGG | + | chr3.2:86658197-86658216 | MS.gene014981:CDS | 50.0% | |
| TCCTCACCAGAAGAAGAACC+TGG | - | chr3.2:86658201-86658220 | None:intergenic | 50.0% | |
| TGTGACAGGGGTCTTAGTAG+TGG | + | chr3.2:86659795-86659814 | MS.gene014981:CDS | 50.0% | |
| TTCCCAGCCTCTTCCATTAG+TGG | - | chr3.2:86658801-86658820 | None:intergenic | 50.0% | |
| ! | GGAACTTGTGGGGGTGTATT+TGG | - | chr3.2:86657973-86657992 | None:intergenic | 50.0% |
| ! | GGCGTGGACCATGAAGATTT+TGG | + | chr3.2:86658941-86658960 | MS.gene014981:CDS | 50.0% |
| ! | TGGGTTGAAGCAATGTGTCC+AGG | + | chr3.2:86658518-86658537 | MS.gene014981:CDS | 50.0% |
| !! | AGACGGACTGCTAGAGCAAA+TGG | + | chr3.2:86659275-86659294 | MS.gene014981:intron | 50.0% |
| AGCAAGAGAAAGTCTCGGCG+TGG | + | chr3.2:86658925-86658944 | MS.gene014981:CDS | 55.0% | |
| CCAGCCTCTTCCATTAGTGG+AGG | - | chr3.2:86658798-86658817 | None:intergenic | 55.0% | |
| CCTCCACTAATGGAAGAGGC+TGG | + | chr3.2:86658795-86658814 | MS.gene014981:CDS | 55.0% | |
| CTCTTCCATTAGTGGAGGCC+CGG | - | chr3.2:86658793-86658812 | None:intergenic | 55.0% | |
| TACTGGCCCAGGCAGATACA+GGG | + | chr3.2:86659572-86659591 | MS.gene014981:CDS | 55.0% | |
| TGTATCTGCCTGGGCCAGTA+GGG | - | chr3.2:86659572-86659591 | None:intergenic | 55.0% | |
| TGTATTTCCCCTACTGGCCC+AGG | + | chr3.2:86659561-86659580 | MS.gene014981:CDS | 55.0% | |
| TTAGTGGCGAGGGCAGAGTT+TGG | - | chr3.2:86660153-86660172 | None:intergenic | 55.0% | |
| ! | GTGGGGGTGTATTTGGGCTT+GGG | - | chr3.2:86657966-86657985 | None:intergenic | 55.0% |
| ! | TGGGGGTGTATTTGGGCTTG+GGG | - | chr3.2:86657965-86657984 | None:intergenic | 55.0% |
| ! | TGTGGGGGTGTATTTGGGCT+TGG | - | chr3.2:86657967-86657986 | None:intergenic | 55.0% |
| !! | GGAGTTTAGGGCTTTGGAGG+TGG | + | chr3.2:86658376-86658395 | MS.gene014981:CDS | 55.0% |
| CGGGCCTCCACTAATGGAAG+AGG | + | chr3.2:86658791-86658810 | MS.gene014981:CDS | 60.0% | |
| CTACTGGCCCAGGCAGATAC+AGG | + | chr3.2:86659571-86659590 | MS.gene014981:CDS | 60.0% | |
| CTGTATCTGCCTGGGCCAGT+AGG | - | chr3.2:86659573-86659592 | None:intergenic | 60.0% | |
| GTATCTGCCTGGGCCAGTAG+GGG | - | chr3.2:86659571-86659590 | None:intergenic | 60.0% | |
| TCTCTCCGGGCCTCCACTAA+TGG | + | chr3.2:86658785-86658804 | MS.gene014981:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 86657757 | 86660661 | 86657757 | ID=MS.gene014981 |
| chr3.2 | mRNA | 86657757 | 86660661 | 86657757 | ID=MS.gene014981.t1;Parent=MS.gene014981 |
| chr3.2 | exon | 86657757 | 86659129 | 86657757 | ID=MS.gene014981.t1.exon1;Parent=MS.gene014981.t1 |
| chr3.2 | CDS | 86657757 | 86659129 | 86657757 | ID=cds.MS.gene014981.t1;Parent=MS.gene014981.t1 |
| chr3.2 | exon | 86659507 | 86659627 | 86659507 | ID=MS.gene014981.t1.exon2;Parent=MS.gene014981.t1 |
| chr3.2 | CDS | 86659507 | 86659627 | 86659507 | ID=cds.MS.gene014981.t1;Parent=MS.gene014981.t1 |
| chr3.2 | exon | 86659715 | 86660008 | 86659715 | ID=MS.gene014981.t1.exon3;Parent=MS.gene014981.t1 |
| chr3.2 | CDS | 86659715 | 86660008 | 86659715 | ID=cds.MS.gene014981.t1;Parent=MS.gene014981.t1 |
| chr3.2 | exon | 86660081 | 86660283 | 86660081 | ID=MS.gene014981.t1.exon4;Parent=MS.gene014981.t1 |
| chr3.2 | CDS | 86660081 | 86660283 | 86660081 | ID=cds.MS.gene014981.t1;Parent=MS.gene014981.t1 |
| chr3.2 | exon | 86660400 | 86660661 | 86660400 | ID=MS.gene014981.t1.exon5;Parent=MS.gene014981.t1 |
| chr3.2 | CDS | 86660400 | 86660661 | 86660400 | ID=cds.MS.gene014981.t1;Parent=MS.gene014981.t1 |
| Gene Sequence |
| Protein sequence |
