Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024073.t1 | XP_003624231.1 | 98.4 | 983 | 15 | 1 | 1 | 982 | 1 | 983 | 0.00E+00 | 1880.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024073.t1 | Q9XIF2 | 77.1 | 992 | 213 | 4 | 1 | 982 | 1 | 988 | 0.0e+00 | 1506.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024073.t1 | G7KSG0 | 98.4 | 983 | 15 | 1 | 1 | 982 | 1 | 983 | 0.0e+00 | 1880.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024073.t1 | MTR_7g080730 | 98.881 | 983 | 10 | 1 | 1 | 982 | 1 | 983 | 0.0 | 2001 |
MS.gene024073.t1 | MTR_8g101340 | 49.587 | 968 | 447 | 11 | 28 | 982 | 45 | 984 | 0.0 | 924 |
MS.gene024073.t1 | MTR_5g069360 | 42.462 | 975 | 492 | 13 | 28 | 982 | 42 | 967 | 0.0 | 786 |
MS.gene024073.t1 | MTR_3g462290 | 35.900 | 1000 | 561 | 18 | 53 | 982 | 342 | 1331 | 0.0 | 576 |
MS.gene024073.t1 | MTR_5g036660 | 34.639 | 485 | 268 | 13 | 51 | 498 | 137 | 609 | 5.08e-68 | 248 |
MS.gene024073.t1 | MTR_3g025300 | 27.093 | 454 | 251 | 19 | 41 | 467 | 1266 | 1666 | 2.70e-27 | 120 |
MS.gene024073.t1 | MTR_3g025300 | 25.720 | 486 | 255 | 16 | 34 | 465 | 395 | 828 | 1.52e-26 | 118 |
MS.gene024073.t1 | MTR_3g025300 | 27.093 | 454 | 251 | 19 | 41 | 467 | 1266 | 1666 | 3.67e-27 | 120 |
MS.gene024073.t1 | MTR_3g025300 | 25.720 | 486 | 255 | 16 | 34 | 465 | 395 | 828 | 1.68e-26 | 118 |
MS.gene024073.t1 | MTR_1g008600 | 24.736 | 473 | 262 | 18 | 36 | 464 | 505 | 927 | 4.48e-24 | 110 |
MS.gene024073.t1 | MTR_4g008780 | 31.754 | 211 | 105 | 12 | 60 | 240 | 88 | 289 | 1.10e-16 | 85.9 |
MS.gene024073.t1 | MTR_2g030905 | 24.942 | 429 | 248 | 17 | 60 | 464 | 154 | 532 | 1.32e-16 | 85.5 |
MS.gene024073.t1 | MTR_4g011450 | 31.250 | 208 | 110 | 11 | 60 | 240 | 1326 | 1527 | 2.73e-16 | 85.1 |
MS.gene024073.t1 | MTR_4g008770 | 32.487 | 197 | 99 | 11 | 60 | 229 | 460 | 649 | 8.43e-16 | 82.4 |
MS.gene024073.t1 | MTR_4g008770 | 32.487 | 197 | 99 | 11 | 60 | 229 | 148 | 337 | 1.74e-15 | 81.6 |
MS.gene024073.t1 | MTR_2g064740 | 28.774 | 212 | 110 | 11 | 60 | 240 | 1371 | 1572 | 5.12e-14 | 77.4 |
MS.gene024073.t1 | MTR_7g075463 | 39.362 | 94 | 49 | 2 | 377 | 465 | 336 | 426 | 8.63e-12 | 70.1 |
MS.gene024073.t1 | MTR_7g075463 | 39.362 | 94 | 49 | 2 | 377 | 465 | 336 | 426 | 1.06e-11 | 69.7 |
MS.gene024073.t1 | MTR_7g075463 | 39.362 | 94 | 49 | 2 | 377 | 465 | 336 | 426 | 1.45e-11 | 69.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024073.t1 | AT1G59760 | 77.117 | 992 | 213 | 4 | 1 | 982 | 1 | 988 | 0.0 | 1574 |
MS.gene024073.t1 | AT2G06990 | 48.828 | 981 | 474 | 8 | 15 | 982 | 30 | 995 | 0.0 | 931 |
MS.gene024073.t1 | AT3G46960 | 35.842 | 1010 | 543 | 20 | 56 | 982 | 220 | 1207 | 0.0 | 563 |
MS.gene024073.t1 | AT3G46960 | 35.842 | 1010 | 543 | 20 | 56 | 982 | 229 | 1216 | 0.0 | 563 |
MS.gene024073.t1 | AT3G46960 | 35.842 | 1010 | 543 | 20 | 56 | 982 | 357 | 1344 | 0.0 | 562 |
MS.gene024073.t1 | AT1G70070 | 35.565 | 478 | 263 | 10 | 56 | 498 | 151 | 618 | 4.60e-72 | 260 |
MS.gene024073.t1 | AT5G61140 | 25.275 | 455 | 258 | 16 | 41 | 467 | 1325 | 1725 | 2.07e-27 | 121 |
MS.gene024073.t1 | AT5G61140 | 25.225 | 444 | 243 | 16 | 59 | 465 | 507 | 898 | 1.47e-24 | 112 |
MS.gene024073.t1 | AT5G61140 | 25.275 | 455 | 258 | 16 | 41 | 467 | 1336 | 1736 | 2.13e-27 | 121 |
MS.gene024073.t1 | AT5G61140 | 25.225 | 444 | 243 | 16 | 59 | 465 | 507 | 898 | 1.52e-24 | 112 |
MS.gene024073.t1 | AT4G32700 | 25.055 | 455 | 249 | 16 | 53 | 464 | 513 | 918 | 6.85e-25 | 113 |
MS.gene024073.t1 | AT1G20960 | 26.126 | 444 | 237 | 18 | 60 | 465 | 505 | 895 | 1.74e-23 | 108 |
MS.gene024073.t1 | AT1G20960 | 27.014 | 211 | 115 | 11 | 60 | 240 | 1351 | 1552 | 3.95e-12 | 71.2 |
MS.gene024073.t1 | AT1G20960 | 26.126 | 444 | 237 | 18 | 60 | 465 | 505 | 895 | 1.74e-23 | 108 |
MS.gene024073.t1 | AT1G20960 | 27.014 | 211 | 115 | 11 | 60 | 240 | 1351 | 1552 | 3.95e-12 | 71.2 |
MS.gene024073.t1 | AT2G42270 | 24.558 | 452 | 252 | 17 | 51 | 465 | 497 | 896 | 4.84e-22 | 103 |
MS.gene024073.t1 | AT2G42270 | 22.737 | 453 | 231 | 19 | 60 | 464 | 1352 | 1733 | 3.27e-19 | 94.7 |
MS.gene024073.t1 | AT3G27730 | 29.947 | 187 | 116 | 5 | 290 | 465 | 244 | 426 | 4.97e-12 | 70.9 |
MS.gene024073.t1 | AT3G27730 | 29.947 | 187 | 116 | 5 | 290 | 465 | 244 | 426 | 4.97e-12 | 70.9 |
MS.gene024073.t1 | AT3G27730 | 29.947 | 187 | 116 | 5 | 290 | 465 | 244 | 426 | 4.97e-12 | 70.9 |
MS.gene024073.t1 | AT3G27730 | 29.947 | 187 | 116 | 5 | 290 | 465 | 244 | 426 | 4.97e-12 | 70.9 |
MS.gene024073.t1 | AT3G27730 | 29.947 | 187 | 116 | 5 | 290 | 465 | 244 | 426 | 5.17e-12 | 70.9 |
MS.gene024073.t1 | AT3G27730 | 29.947 | 187 | 116 | 5 | 290 | 465 | 244 | 426 | 5.17e-12 | 70.9 |
MS.gene024073.t1 | AT3G27730 | 29.947 | 187 | 116 | 5 | 290 | 465 | 244 | 426 | 5.17e-12 | 70.9 |
Find 210 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGGTGGCGATTTCCTCTTTA+AGG | 0.097678 | 7.1:+23868249 | None:intergenic |
GACAATGTCCCTCTTGATTT+TGG | 0.128988 | 7.1:+23857659 | None:intergenic |
ATCCCCATTAAGATCCATTT+TGG | 0.197685 | 7.1:+23866298 | None:intergenic |
GTCATTTAGGCCTGATATTA+TGG | 0.201439 | 7.1:-23857862 | MS.gene024073:CDS |
ACCTTGTCATATTGTTTATA+CGG | 0.254047 | 7.1:-23866726 | MS.gene024073:CDS |
GAAGGATTATTACAATCTTC+TGG | 0.257468 | 7.1:-23862144 | MS.gene024073:CDS |
TCAGCAAATTCTTTGGCATT+AGG | 0.265700 | 7.1:+23866887 | None:intergenic |
CACCCAATCAGCAAATTCTT+TGG | 0.268430 | 7.1:+23866880 | None:intergenic |
CAGCAAATTCTTTGGCATTA+GGG | 0.269491 | 7.1:+23866888 | None:intergenic |
ACTTGTCCCCATCAAATTTC+CGG | 0.276089 | 7.1:+23863191 | None:intergenic |
GGTCTTTGCAGGTTCTTTAT+TGG | 0.285514 | 7.1:+23868114 | None:intergenic |
GTCTTTGCAGGTTCTTTATT+GGG | 0.292981 | 7.1:+23868115 | None:intergenic |
TCGATCACTTCCTTTAGAAT+TGG | 0.300189 | 7.1:+23864812 | None:intergenic |
ATTTCTGCAGATGGCCAAAA+TGG | 0.306986 | 7.1:-23866312 | MS.gene024073:intron |
AAAGGCTTTACCTGAGATAT+AGG | 0.313127 | 7.1:+23861686 | None:intergenic |
AATTTGATGGGGACAAGTTT+AGG | 0.314554 | 7.1:-23863186 | MS.gene024073:CDS |
TGATTACTAAGTGCTTTAAT+AGG | 0.318601 | 7.1:+23867850 | None:intergenic |
ATGGCCAAAATGGATCTTAA+TGG | 0.321505 | 7.1:-23866302 | MS.gene024073:CDS |
AGCCTCCCAGGCTGTAAATA+AGG | 0.322872 | 7.1:+23862059 | None:intergenic |
AAGACAAAACGGGCATTCTT+TGG | 0.334017 | 7.1:+23866926 | None:intergenic |
CGATCACTTCCTTTAGAATT+GGG | 0.347514 | 7.1:+23864813 | None:intergenic |
ATCTACTACTTTAGCATTCA+AGG | 0.353316 | 7.1:-23859158 | MS.gene024073:CDS |
TGGCCAAAATGGATCTTAAT+GGG | 0.356795 | 7.1:-23866301 | MS.gene024073:CDS |
CACACCTTCATGTCTTCTTC+AGG | 0.358573 | 7.1:+23859428 | None:intergenic |
TAGAAGGAACTACAAATATA+AGG | 0.358581 | 7.1:+23857626 | None:intergenic |
CACCATCTTCACAGCGCATT+TGG | 0.363464 | 7.1:+23862494 | None:intergenic |
GAAAACGCTAAGTGGCAAAA+AGG | 0.368725 | 7.1:-23866551 | MS.gene024073:CDS |
ATTGAACATTAGTTCTGTTA+AGG | 0.382269 | 7.1:+23858537 | None:intergenic |
ATCGCGAAAGAGGTGTGGTT+TGG | 0.389553 | 7.1:-23866970 | MS.gene024073:CDS |
ATCAAGTTCTTCTCGAGGTT+TGG | 0.390532 | 7.1:+23858432 | None:intergenic |
GTACTTAGTTGTGGATGAAA+AGG | 0.391326 | 7.1:-23866648 | MS.gene024073:CDS |
ACTTTGTAAGATGCATCTTC+CGG | 0.395837 | 7.1:+23861812 | None:intergenic |
ACAAATGTCCGGAAATTTGA+TGG | 0.398421 | 7.1:-23863199 | MS.gene024073:CDS |
GTGAAAGGGAAGGTCTTTGC+AGG | 0.399874 | 7.1:+23868103 | None:intergenic |
CCTTGCATTCAAGCTGAAGC+TGG | 0.400039 | 7.1:+23858368 | None:intergenic |
CAACATTATATATTTCCTTC+CGG | 0.402599 | 7.1:-23866683 | MS.gene024073:CDS |
AGGTCATGACTACAGAAATC+TGG | 0.404933 | 7.1:-23867072 | MS.gene024073:CDS |
TCTGATGTTGGTTTGATGAC+TGG | 0.405642 | 7.1:-23867799 | MS.gene024073:CDS |
AATGTTCAATGGTGTCTTCA+AGG | 0.420240 | 7.1:-23858524 | MS.gene024073:CDS |
ATAGAAGCAGCTAAGTCAAT+TGG | 0.420476 | 7.1:-23857720 | MS.gene024073:CDS |
CTTTCTGAAAGCTGTCTTCA+CGG | 0.420990 | 7.1:+23866618 | None:intergenic |
TCGCGAAAGAGGTGTGGTTT+GGG | 0.423444 | 7.1:-23866969 | MS.gene024073:CDS |
TCTTTATTGGGAGATGAAGA+TGG | 0.430809 | 7.1:+23868127 | None:intergenic |
CATACCAAGCAAGAGGCATT+AGG | 0.430916 | 7.1:+23867760 | None:intergenic |
TGCCAAAGAATTTGCTGATT+GGG | 0.434852 | 7.1:-23866882 | MS.gene024073:CDS |
CTCGCCAGACAAAACAAGAT+AGG | 0.441660 | 7.1:+23858473 | None:intergenic |
TCCAACGGCAAAAGATCCTT+TGG | 0.442143 | 7.1:+23859527 | None:intergenic |
TACACAACCTCCATAATATC+AGG | 0.445091 | 7.1:+23857852 | None:intergenic |
TAAGTACAGACCCTCACTTC+CGG | 0.445197 | 7.1:+23866664 | None:intergenic |
GGTTTCAATTCCTATATCTC+AGG | 0.445399 | 7.1:-23861696 | MS.gene024073:intron |
CCCTTGCTCAAACGTGGAAT+AGG | 0.446304 | 7.1:-23864857 | MS.gene024073:CDS |
ACATAGAAGTTTGAATAAAG+AGG | 0.447076 | 7.1:-23862117 | MS.gene024073:CDS |
TGACGAAGAAGACAGTTTGA+AGG | 0.449850 | 7.1:-23862162 | MS.gene024073:CDS |
TGATCCTAATGCCTCTTGCT+TGG | 0.451425 | 7.1:-23867764 | MS.gene024073:intron |
CGTGTAGTGGTTGTTGTGCT+TGG | 0.451626 | 7.1:+23868200 | None:intergenic |
ATCCCGTAGAATAGAGGCTT+TGG | 0.452604 | 7.1:-23859302 | MS.gene024073:CDS |
CATTAGGGACAGTGGCAGAT+AGG | 0.453599 | 7.1:+23866903 | None:intergenic |
AAGGAAATATATAATGTTGA+AGG | 0.454907 | 7.1:+23866687 | None:intergenic |
AAACAATATGACAAGGTTGT+TGG | 0.457424 | 7.1:+23866732 | None:intergenic |
TGGTGTCTTCAAGGACATAA+AGG | 0.457457 | 7.1:-23858515 | MS.gene024073:CDS |
AGGTCACCAGGGAGGTGGCT+TGG | 0.461095 | 7.1:-23867024 | MS.gene024073:CDS |
ATAGGAATTGAAACCACAAT+AGG | 0.461372 | 7.1:+23861704 | None:intergenic |
TTCCCGCTGCTGATGGTGAT+AGG | 0.461884 | 7.1:-23866580 | MS.gene024073:CDS |
TGGCAGATAGGAAGACAAAA+CGG | 0.465801 | 7.1:+23866915 | None:intergenic |
CGAAAACTCAGAATCCGTTA+TGG | 0.467418 | 7.1:-23868044 | MS.gene024073:intron |
GGTTGTTGTGCTTGGTGGGA+AGG | 0.468052 | 7.1:+23868208 | None:intergenic |
GGAGATGAAGATGGAGGTGG+AGG | 0.469465 | 7.1:+23868136 | None:intergenic |
AAGCAAGAAAGAGGGTTCTT+CGG | 0.470866 | 7.1:-23859126 | MS.gene024073:CDS |
TGGTTTACTCCCAATTCTAA+AGG | 0.471314 | 7.1:-23864822 | MS.gene024073:CDS |
GGTGATGGTTCTTCTTCTCC+CGG | 0.471760 | 7.1:+23868229 | None:intergenic |
GTGTGAATTTCTTGCAATGC+AGG | 0.471783 | 7.1:-23866420 | MS.gene024073:intron |
CATTTGTATATATTCTCCAC+TGG | 0.474713 | 7.1:+23863156 | None:intergenic |
TACATGCGTGATCGCGAAAG+AGG | 0.475262 | 7.1:-23866980 | MS.gene024073:CDS |
GGGCAGCTGATAGTTTAAAC+AGG | 0.475906 | 7.1:-23863033 | MS.gene024073:intron |
TGAAAGGGGTCGAGTGTGAA+AGG | 0.476355 | 7.1:+23868088 | None:intergenic |
AAGAGGGTTCTTCGGAGGCT+AGG | 0.479883 | 7.1:-23859118 | MS.gene024073:CDS |
GTTAATAGCTTGAGATTGAA+AGG | 0.481005 | 7.1:+23868072 | None:intergenic |
CTTTCTAGATTTAGTGAGAA+GGG | 0.482853 | 7.1:-23859467 | MS.gene024073:CDS |
TGTTTACCTTATTTACAGCC+TGG | 0.482867 | 7.1:-23862065 | MS.gene024073:CDS |
TTAATAGCTTGAGATTGAAA+GGG | 0.484101 | 7.1:+23868073 | None:intergenic |
ACAAAGGGTCTGAGGTCACC+AGG | 0.492073 | 7.1:-23867036 | MS.gene024073:CDS |
GTTTCAAGAAGGTCTAATCA+AGG | 0.492777 | 7.1:-23864783 | MS.gene024073:intron |
CAAATGTCCGGAAATTTGAT+GGG | 0.493522 | 7.1:-23863198 | MS.gene024073:CDS |
TCTCCAAAGCCTCTATTCTA+CGG | 0.494153 | 7.1:+23859299 | None:intergenic |
TTCAAAGTTCTATGAGATCA+TGG | 0.494449 | 7.1:-23857814 | MS.gene024073:CDS |
AAAAGCATCCCGTAGAATAG+AGG | 0.497857 | 7.1:-23859308 | MS.gene024073:CDS |
GTCTGAGGTCACCAGGGAGG+TGG | 0.498113 | 7.1:-23867029 | MS.gene024073:CDS |
ATGAGCTTAAAGCAAGAAAG+AGG | 0.499856 | 7.1:-23859135 | MS.gene024073:CDS |
TTGGGAGATGAAGATGGAGG+TGG | 0.502970 | 7.1:+23868133 | None:intergenic |
AGAGGGTTCTTCGGAGGCTA+GGG | 0.503872 | 7.1:-23859117 | MS.gene024073:intron |
TTATGGAGGTTGTGTATGCT+TGG | 0.504319 | 7.1:-23857845 | MS.gene024073:CDS |
CTCCAAAGCCTCTATTCTAC+GGG | 0.506679 | 7.1:+23859300 | None:intergenic |
GTTGTGTATGCTTGGGCGAA+AGG | 0.507277 | 7.1:-23857837 | MS.gene024073:CDS |
TGGAGAGAAACGAGCCTCCC+AGG | 0.510071 | 7.1:+23862047 | None:intergenic |
ATGCCAAAGAATTTGCTGAT+TGG | 0.510427 | 7.1:-23866883 | MS.gene024073:CDS |
TCCTATTCCACGTTTGAGCA+AGG | 0.510479 | 7.1:+23864856 | None:intergenic |
GACAATGTGGTCGACTTGAA+AGG | 0.514288 | 7.1:-23858598 | MS.gene024073:CDS |
GTTTACCTTATTTACAGCCT+GGG | 0.514370 | 7.1:-23862064 | MS.gene024073:CDS |
TACTTAGTTGTGGATGAAAA+GGG | 0.515805 | 7.1:-23866647 | MS.gene024073:CDS |
TTAACAGAACTAATGTTCAA+TGG | 0.517657 | 7.1:-23858535 | MS.gene024073:CDS |
CTTAAAGAGGAAATCGCCAC+CGG | 0.517920 | 7.1:-23868248 | MS.gene024073:CDS |
GCTCTTATTCCCGCTGCTGA+TGG | 0.521231 | 7.1:-23866587 | MS.gene024073:CDS |
CCTATTCCACGTTTGAGCAA+GGG | 0.522248 | 7.1:+23864857 | None:intergenic |
ATTTGCTGATTGGGTGGCAA+AGG | 0.522437 | 7.1:-23866873 | MS.gene024073:intron |
TGTGCTTGGTGGGAAGGTGA+TGG | 0.522618 | 7.1:+23868214 | None:intergenic |
CCAGCTTCAGCTTGAATGCA+AGG | 0.523581 | 7.1:-23858368 | MS.gene024073:intron |
TCGAGCCATTCCTGATCTTG+AGG | 0.524397 | 7.1:-23862425 | MS.gene024073:intron |
AAATAAGGTAAACAGTGTCT+TGG | 0.524512 | 7.1:+23862074 | None:intergenic |
CCTCATGGTTGATGAGAAGA+TGG | 0.525125 | 7.1:-23863086 | MS.gene024073:CDS |
GGCAGATAGGAAGACAAAAC+GGG | 0.525213 | 7.1:+23866916 | None:intergenic |
ATATAATGTTGAAGGGGAGT+TGG | 0.526101 | 7.1:+23866695 | None:intergenic |
CTTCCTCACTAGAAGTGCAT+TGG | 0.527980 | 7.1:+23862027 | None:intergenic |
CTAAAGCTGAAAAGTATCAC+AGG | 0.529799 | 7.1:+23866452 | None:intergenic |
AGGAAATATATAATGTTGAA+GGG | 0.531599 | 7.1:+23866688 | None:intergenic |
AGGATTAAGGGTGTTTCTGA+AGG | 0.532900 | 7.1:-23861945 | MS.gene024073:intron |
TAGTGGTTGTTGTGCTTGGT+GGG | 0.533211 | 7.1:+23868204 | None:intergenic |
ACAATGTGGTCGACTTGAAA+GGG | 0.533604 | 7.1:-23858597 | MS.gene024073:CDS |
CTTGCATTCAAGCTGAAGCT+GGG | 0.533738 | 7.1:+23858369 | None:intergenic |
ATCGAGATCTTGTTTCAAGA+AGG | 0.534720 | 7.1:-23864794 | MS.gene024073:CDS |
TTCCTATCACCATCAGCAGC+GGG | 0.534985 | 7.1:+23866578 | None:intergenic |
CATGTTGTAGCTTAAATGAA+AGG | 0.535435 | 7.1:+23862525 | None:intergenic |
GTATCTGCACATACTTCTGC+TGG | 0.538968 | 7.1:-23867943 | MS.gene024073:CDS |
GTCGACGAGGTATTGATGAC+CGG | 0.539554 | 7.1:-23863120 | MS.gene024073:CDS |
CACAATTACAAGATACTGCT+CGG | 0.542637 | 7.1:-23858399 | MS.gene024073:CDS |
GTAGTGGTTGTTGTGCTTGG+TGG | 0.542825 | 7.1:+23868203 | None:intergenic |
AAAAGGTTTGGTGCTGGGCA+AGG | 0.545517 | 7.1:-23866534 | MS.gene024073:CDS |
TGAGGGTCTGTACTTAGTTG+TGG | 0.546367 | 7.1:-23866657 | MS.gene024073:CDS |
ATACAAATGAGTGGTCGTGC+TGG | 0.549699 | 7.1:-23863142 | MS.gene024073:CDS |
TAGATCAATTAGAAGACTTG+AGG | 0.550410 | 7.1:-23857760 | MS.gene024073:CDS |
GTGTTAGTTGTATACCATAA+CGG | 0.551589 | 7.1:+23868030 | None:intergenic |
AACCAAATGCGCTGTGAAGA+TGG | 0.552675 | 7.1:-23862496 | MS.gene024073:CDS |
GGCGTAGTATGCAATACAAA+GGG | 0.556159 | 7.1:-23867051 | MS.gene024073:CDS |
ATATTTCCTTCCGGAAGTGA+GGG | 0.557515 | 7.1:-23866674 | MS.gene024073:CDS |
GCTACAGAGACCTTCAGCAT+TGG | 0.559468 | 7.1:-23863253 | MS.gene024073:CDS |
GCGCTGTGAAGATGGTGATC+CGG | 0.560404 | 7.1:-23862488 | MS.gene024073:CDS |
TTGATGGGGACAAGTTTAGG+TGG | 0.561783 | 7.1:-23863183 | MS.gene024073:CDS |
TATGGAGGTTGTGTATGCTT+GGG | 0.562105 | 7.1:-23857844 | MS.gene024073:CDS |
TAAAGACTCTTGAAGAAGAG+AGG | 0.562228 | 7.1:-23862199 | MS.gene024073:CDS |
AAACAATGGGATCCTTAAAG+AGG | 0.562800 | 7.1:-23868261 | None:intergenic |
TTCTGCTGGCAAAACTGTTG+TGG | 0.565117 | 7.1:-23867929 | MS.gene024073:CDS |
TATATTTCCTTCCGGAAGTG+AGG | 0.568482 | 7.1:-23866675 | MS.gene024073:CDS |
AATTGGAGAAATTGAGCTTG+AGG | 0.570010 | 7.1:-23857703 | MS.gene024073:CDS |
AAAGACTCTTGAAGAAGAGA+GGG | 0.570286 | 7.1:-23862198 | MS.gene024073:CDS |
TCTTTCTAGATTTAGTGAGA+AGG | 0.571697 | 7.1:-23859468 | MS.gene024073:CDS |
TCGACGAGGTATTGATGACC+GGG | 0.575134 | 7.1:-23863119 | MS.gene024073:CDS |
AATAATCCAAGCCACCTCCC+TGG | 0.577091 | 7.1:+23867018 | None:intergenic |
GAAAGGGGTCGAGTGTGAAA+GGG | 0.577874 | 7.1:+23868089 | None:intergenic |
TACCTTATTTACAGCCTGGG+AGG | 0.578083 | 7.1:-23862061 | MS.gene024073:CDS |
TGATGATAAGAAGCTTCCTC+AGG | 0.578518 | 7.1:-23866219 | MS.gene024073:intron |
AGATGATGCAAGCATAAAGC+CGG | 0.579138 | 7.1:-23861831 | MS.gene024073:CDS |
ACAAACCTCAAGATCAGGAA+TGG | 0.579158 | 7.1:+23862420 | None:intergenic |
AGAACGTGGAGAACCTATTG+TGG | 0.590897 | 7.1:-23861717 | MS.gene024073:CDS |
TATTGAGGATCAGTTGACAT+GGG | 0.591048 | 7.1:-23861988 | MS.gene024073:CDS |
AGCAGATCAAGTTCTTCTCG+AGG | 0.592349 | 7.1:+23858427 | None:intergenic |
CCGGGGAGTATGTATCCTCA+TGG | 0.593714 | 7.1:-23863101 | MS.gene024073:CDS |
TCTCCAATGCACTTCTAGTG+AGG | 0.594103 | 7.1:-23862030 | MS.gene024073:CDS |
ATGCTGCCCTTGCTCAAACG+TGG | 0.599209 | 7.1:-23864863 | MS.gene024073:CDS |
TTATTGGGAGATGAAGATGG+AGG | 0.600377 | 7.1:+23868130 | None:intergenic |
AGAAAGCGACATATTCAAGA+TGG | 0.604009 | 7.1:-23866504 | MS.gene024073:CDS |
TGGCGTAGTATGCAATACAA+AGG | 0.605128 | 7.1:-23867052 | MS.gene024073:CDS |
CACGATGTCTCATATCCACA+TGG | 0.605501 | 7.1:-23868169 | MS.gene024073:CDS |
CATATTCAAACCAATGCTGA+AGG | 0.606797 | 7.1:+23863243 | None:intergenic |
TTCTTTGGCATTAGGGACAG+TGG | 0.608991 | 7.1:+23866895 | None:intergenic |
AGATCCTGAAGAAGACATGA+AGG | 0.609387 | 7.1:-23859432 | MS.gene024073:intron |
ATTGAGGATCAGTTGACATG+GGG | 0.612050 | 7.1:-23861987 | MS.gene024073:CDS |
GCTTGAGGCAAAGTTTGAAG+AGG | 0.612703 | 7.1:-23857688 | MS.gene024073:CDS |
AATGTTGAAGGGGAGTTGGT+CGG | 0.613901 | 7.1:+23866699 | None:intergenic |
GGAAATATATAATGTTGAAG+GGG | 0.613970 | 7.1:+23866689 | None:intergenic |
TTATTGAGGATCAGTTGACA+TGG | 0.615043 | 7.1:-23861989 | MS.gene024073:CDS |
TTTCCTATCACCATCAGCAG+CGG | 0.617188 | 7.1:+23866577 | None:intergenic |
TCTTAATGGGGATATAGAGA+AGG | 0.617908 | 7.1:-23866288 | MS.gene024073:CDS |
TCTTCTTCAGGATCTAGAAG+TGG | 0.620210 | 7.1:+23859440 | None:intergenic |
TAATAGCTTGAGATTGAAAG+GGG | 0.621425 | 7.1:+23868074 | None:intergenic |
ATTTAGGCCTGATATTATGG+AGG | 0.621480 | 7.1:-23857859 | MS.gene024073:CDS |
GAGATGAAGATGGAGGTGGA+GGG | 0.622202 | 7.1:+23868137 | None:intergenic |
AGGCAGTGTCCAAAATCAAG+AGG | 0.624431 | 7.1:-23857668 | MS.gene024073:CDS |
GTAGTAGCATACCAAGCAAG+AGG | 0.626686 | 7.1:+23867753 | None:intergenic |
TTAAAGAGGAAATCGCCACC+GGG | 0.631503 | 7.1:-23868247 | MS.gene024073:CDS |
TGAGCTTAAAGCAAGAAAGA+GGG | 0.632438 | 7.1:-23859134 | MS.gene024073:CDS |
TCGTGAACACAGTCGTGTAG+TGG | 0.633890 | 7.1:+23868187 | None:intergenic |
CCATGAGGATACATACTCCC+CGG | 0.637452 | 7.1:+23863101 | None:intergenic |
CAAAGAATTTGCTGATTGGG+TGG | 0.637884 | 7.1:-23866879 | MS.gene024073:CDS |
TATGCAATACAAAGGGTCTG+AGG | 0.638495 | 7.1:-23867044 | MS.gene024073:CDS |
GGCAGTGTCCAAAATCAAGA+GGG | 0.648163 | 7.1:-23857667 | MS.gene024073:CDS |
GGAATAGGAGTACATCACTC+TGG | 0.648671 | 7.1:-23864842 | MS.gene024073:CDS |
GGAGAATATATACAAATGAG+TGG | 0.649361 | 7.1:-23863151 | MS.gene024073:CDS |
CAAGAAAGAGGGTTCTTCGG+AGG | 0.650223 | 7.1:-23859123 | MS.gene024073:CDS |
TTGAGGATCAGTTGACATGG+GGG | 0.651605 | 7.1:-23861986 | MS.gene024073:CDS |
AAATGTCCGGAAATTTGATG+GGG | 0.652699 | 7.1:-23863197 | MS.gene024073:CDS |
GCGTGATCGCGAAAGAGGTG+TGG | 0.653007 | 7.1:-23866975 | MS.gene024073:CDS |
TACAGACCCTCACTTCCGGA+AGG | 0.658488 | 7.1:+23866668 | None:intergenic |
GATGGTTCTTCTTCTCCCGG+TGG | 0.659157 | 7.1:+23868232 | None:intergenic |
AAGTTTAGGTGGATAACCAG+TGG | 0.660788 | 7.1:-23863172 | MS.gene024073:CDS |
GGCCAAAATGGATCTTAATG+GGG | 0.661374 | 7.1:-23866300 | MS.gene024073:CDS |
CAAAGGGTCTGAGGTCACCA+GGG | 0.663810 | 7.1:-23867035 | MS.gene024073:CDS |
CCTGCGTCTATACATACCAA+AGG | 0.668515 | 7.1:-23859543 | MS.gene024073:CDS |
AGTGGTCGTGCTGGTCGACG+AGG | 0.669500 | 7.1:-23863133 | MS.gene024073:CDS |
TGTCTTCAAGGACATAAAGG+TGG | 0.672228 | 7.1:-23858512 | MS.gene024073:CDS |
TGTGGTCGACTTGAAAGGGA+AGG | 0.673279 | 7.1:-23858593 | MS.gene024073:CDS |
GTGGTGACGAAAGATAAACT+TGG | 0.680698 | 7.1:-23861770 | MS.gene024073:CDS |
CCTTTGGTATGTATAGACGC+AGG | 0.683839 | 7.1:+23859543 | None:intergenic |
GGAGGGTGAACGTAGCCATG+TGG | 0.685026 | 7.1:+23868154 | None:intergenic |
TCCGTATAAACAATATGACA+AGG | 0.686576 | 7.1:+23866725 | None:intergenic |
AGGGTCTGAGGTCACCAGGG+AGG | 0.689813 | 7.1:-23867032 | MS.gene024073:CDS |
GGGGTCGAGTGTGAAAGGGA+AGG | 0.690124 | 7.1:+23868093 | None:intergenic |
CCATCTTCTCATCAACCATG+AGG | 0.692068 | 7.1:+23863086 | None:intergenic |
ATTGTTCCTCTAAAAGAACG+TGG | 0.697312 | 7.1:-23861731 | MS.gene024073:CDS |
TGATATTCTTACAAGATGTG+TGG | 0.703141 | 7.1:-23861789 | MS.gene024073:CDS |
ATATGCTACAAGTGACAATG+TGG | 0.705172 | 7.1:-23858611 | MS.gene024073:CDS |
CGACGAGGTATTGATGACCG+GGG | 0.761255 | 7.1:-23863118 | MS.gene024073:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.1 | gene | 23857635 | 23868278 | 23857635 | ID=MS.gene024073 |
chr7.1 | mRNA | 23857635 | 23868278 | 23857635 | ID=MS.gene024073.t1;Parent=MS.gene024073 |
chr7.1 | exon | 23868045 | 23868278 | 23868045 | ID=MS.gene024073.t1.exon1;Parent=MS.gene024073.t1 |
chr7.1 | CDS | 23868045 | 23868278 | 23868045 | ID=cds.MS.gene024073.t1;Parent=MS.gene024073.t1 |
chr7.1 | exon | 23867765 | 23867965 | 23867765 | ID=MS.gene024073.t1.exon2;Parent=MS.gene024073.t1 |
chr7.1 | CDS | 23867765 | 23867965 | 23867765 | ID=cds.MS.gene024073.t1;Parent=MS.gene024073.t1 |
chr7.1 | exon | 23866874 | 23867092 | 23866874 | ID=MS.gene024073.t1.exon3;Parent=MS.gene024073.t1 |
chr7.1 | CDS | 23866874 | 23867092 | 23866874 | ID=cds.MS.gene024073.t1;Parent=MS.gene024073.t1 |
chr7.1 | exon | 23866421 | 23866759 | 23866421 | ID=MS.gene024073.t1.exon4;Parent=MS.gene024073.t1 |
chr7.1 | CDS | 23866421 | 23866759 | 23866421 | ID=cds.MS.gene024073.t1;Parent=MS.gene024073.t1 |
chr7.1 | exon | 23866220 | 23866324 | 23866220 | ID=MS.gene024073.t1.exon5;Parent=MS.gene024073.t1 |
chr7.1 | CDS | 23866220 | 23866324 | 23866220 | ID=cds.MS.gene024073.t1;Parent=MS.gene024073.t1 |
chr7.1 | exon | 23864784 | 23864894 | 23864784 | ID=MS.gene024073.t1.exon6;Parent=MS.gene024073.t1 |
chr7.1 | CDS | 23864784 | 23864894 | 23864784 | ID=cds.MS.gene024073.t1;Parent=MS.gene024073.t1 |
chr7.1 | exon | 23863034 | 23863284 | 23863034 | ID=MS.gene024073.t1.exon7;Parent=MS.gene024073.t1 |
chr7.1 | CDS | 23863034 | 23863284 | 23863034 | ID=cds.MS.gene024073.t1;Parent=MS.gene024073.t1 |
chr7.1 | exon | 23862426 | 23862549 | 23862426 | ID=MS.gene024073.t1.exon8;Parent=MS.gene024073.t1 |
chr7.1 | CDS | 23862426 | 23862549 | 23862426 | ID=cds.MS.gene024073.t1;Parent=MS.gene024073.t1 |
chr7.1 | exon | 23861946 | 23862228 | 23861946 | ID=MS.gene024073.t1.exon9;Parent=MS.gene024073.t1 |
chr7.1 | CDS | 23861946 | 23862228 | 23861946 | ID=cds.MS.gene024073.t1;Parent=MS.gene024073.t1 |
chr7.1 | exon | 23861697 | 23861851 | 23861697 | ID=MS.gene024073.t1.exon10;Parent=MS.gene024073.t1 |
chr7.1 | CDS | 23861697 | 23861851 | 23861697 | ID=cds.MS.gene024073.t1;Parent=MS.gene024073.t1 |
chr7.1 | exon | 23859433 | 23859582 | 23859433 | ID=MS.gene024073.t1.exon11;Parent=MS.gene024073.t1 |
chr7.1 | CDS | 23859433 | 23859582 | 23859433 | ID=cds.MS.gene024073.t1;Parent=MS.gene024073.t1 |
chr7.1 | exon | 23859118 | 23859350 | 23859118 | ID=MS.gene024073.t1.exon12;Parent=MS.gene024073.t1 |
chr7.1 | CDS | 23859118 | 23859350 | 23859118 | ID=cds.MS.gene024073.t1;Parent=MS.gene024073.t1 |
chr7.1 | exon | 23858369 | 23858633 | 23858369 | ID=MS.gene024073.t1.exon13;Parent=MS.gene024073.t1 |
chr7.1 | CDS | 23858369 | 23858633 | 23858369 | ID=cds.MS.gene024073.t1;Parent=MS.gene024073.t1 |
chr7.1 | exon | 23857635 | 23857913 | 23857635 | ID=MS.gene024073.t1.exon14;Parent=MS.gene024073.t1 |
chr7.1 | CDS | 23857635 | 23857913 | 23857635 | ID=cds.MS.gene024073.t1;Parent=MS.gene024073.t1 |
Gene Sequence |
Protein sequence |