AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene025201

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene025201.t1 MTR_2g041270 93.313 658 13 1 1 658 1 627 0.0 1259
MS.gene025201.t1 MTR_3g047950 72.258 465 114 3 203 655 121 582 0.0 698
MS.gene025201.t1 MTR_3g047950 61.983 121 46 0 1 121 1 121 3.40e-38 152
MS.gene025201.t1 MTR_4g109580 36.207 464 274 7 206 655 159 614 3.65e-93 301
MS.gene025201.t1 MTR_4g109580 38.500 400 224 7 206 591 159 550 1.34e-84 276
MS.gene025201.t1 MTR_4g109590 26.923 286 162 8 383 657 18 267 1.89e-22 97.8
MS.gene025201.t1 MTR_5g027390 24.932 369 230 15 237 587 23 362 2.59e-16 82.4
MS.gene025201.t1 MTR_4g070090 25.074 339 219 13 266 587 74 394 1.49e-15 80.5
MS.gene025201.t1 MTR_5g026880 34.400 125 71 2 1 125 1 114 9.82e-15 72.0
MS.gene025201.t1 MTR_6g052340 28.708 209 135 8 254 452 42 246 2.72e-14 76.6
MS.gene025201.t1 MTR_5g078250 24.797 246 166 7 254 486 46 285 1.22e-11 68.2
MS.gene025201.t1 MTR_8g479260 19.895 382 260 14 225 587 20 374 2.27e-11 67.4
MS.gene025201.t1 MTR_6g039240 22.330 309 193 11 215 504 8 288 5.24e-11 64.3
MS.gene025201.t1 MTR_4g036240 22.146 438 306 16 214 639 7 421 5.90e-11 65.9
MS.gene025201.t1 MTR_2g008650 19.634 382 261 14 225 587 20 374 6.22e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene025201.t1 AT2G06510 66.870 655 201 4 1 654 1 640 0.0 901
MS.gene025201.t1 AT2G06510 66.614 632 195 4 24 654 1 617 0.0 872
MS.gene025201.t1 AT4G19130 49.854 684 302 11 1 656 1 671 0.0 681
MS.gene025201.t1 AT4G19130 49.707 682 306 8 1 656 2 672 0.0 681
MS.gene025201.t1 AT5G45400 61.474 475 178 4 184 656 270 741 0.0 641
MS.gene025201.t1 AT5G45400 33.758 157 97 2 1 150 1 157 5.45e-19 92.0
MS.gene025201.t1 AT5G08020 32.584 623 346 14 42 654 41 599 2.80e-102 324
MS.gene025201.t1 AT5G61000 31.065 676 389 17 1 653 1 622 9.40e-96 308
MS.gene025201.t1 AT1G52950 21.445 429 291 13 215 621 10 414 2.93e-15 79.7

Find 184 sgRNAs with CRISPR-Local

Find 250 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATTATTATTAATATTTC+TGG 0.129088 2.2:-46578486 None:intergenic
ACCAGCCTTTACTGCTAAAA+TGG 0.144775 2.2:-46579317 None:intergenic
CAGAAATATTAATAATAATT+TGG 0.171665 2.2:+46578487 MS.gene025201:CDS
TGCAGTAACCCTTGCCTTGA+TGG 0.192465 2.2:-46578762 None:intergenic
GGAAGCAGGGGAGGAGATTA+TGG 0.234809 2.2:+46579804 MS.gene025201:CDS
GATTTCACAATCAGGTATTA+TGG 0.235355 2.2:-46578384 None:intergenic
ATGCTATCCTTGATGTTATT+GGG 0.237693 2.2:+46579116 MS.gene025201:CDS
GTAGTAATGGGCAGAATTTC+AGG 0.238903 2.2:+46578525 MS.gene025201:CDS
GTAGTAATGGGCAGAATTTC+AGG 0.238903 2.2:+46578615 MS.gene025201:CDS
AATGCTATCCTTGATGTTAT+TGG 0.260217 2.2:+46579115 MS.gene025201:CDS
AGCTGCTTTAAATCCCTATC+AGG 0.291739 2.2:+46578730 MS.gene025201:CDS
TTCCTTGTACAGGATTATTA+TGG 0.291986 2.2:+46578346 MS.gene025201:intron
TGCTTCTCTATCCATTTCTA+AGG 0.293301 2.2:+46579462 MS.gene025201:CDS
TTGAATCTAAAGGACAATTC+TGG 0.293961 2.2:+46579208 MS.gene025201:CDS
AACTTGGGTAACTGCTTTCC+AGG 0.306558 2.2:+46579783 MS.gene025201:CDS
TAATCTCCTCCCCTGCTTCC+TGG 0.309445 2.2:-46579801 None:intergenic
GAGTGTTGAGCTAACACTTT+GGG 0.310178 2.2:+46579234 MS.gene025201:CDS
GTCTGAGCCTCAGGGAAATC+TGG 0.314113 2.2:-46579403 None:intergenic
GTTCTTAAGGTCTGAGCCTC+AGG 0.330109 2.2:-46579412 None:intergenic
TTGATCAAACCAGGTTCTTA+AGG 0.331128 2.2:-46579425 None:intergenic
GATGGCCCACCTACCCTGAT+AGG 0.333085 2.2:-46578744 None:intergenic
GCCCTCATTGTTATCCAGTC+TGG 0.338147 2.2:-46579568 None:intergenic
CAATCACTGCCTACGGAACT+TGG 0.351957 2.2:-46580043 None:intergenic
CTCAACGACCGAGTCAATAC+TGG 0.354429 2.2:+46576130 MS.gene025201:CDS
TCAGGCAATGCTTTCTGAAC+TGG 0.362621 2.2:-46578443 None:intergenic
GGTATAGAACCATCCTCATC+TGG 0.367686 2.2:-46579040 None:intergenic
CTCAAAATGCTGGTAGTAAT+GGG 0.368189 2.2:+46578513 MS.gene025201:CDS
TCAATCATTTGAAGAATGAA+TGG 0.372621 2.2:+46578978 MS.gene025201:CDS
CAGGAGGATGATGAAAAGTT+TGG 0.376292 2.2:+46579865 MS.gene025201:CDS
TGCCCATTACTACCAGCATT+TGG 0.378317 2.2:-46578605 None:intergenic
GCTCAAATCCAGGATCATTC+AGG 0.380015 2.2:+46579757 MS.gene025201:CDS
TCTCACCGCAAACGCTATTC+CGG 0.381154 2.2:+46575958 MS.gene025201:CDS
ACAGCTTGCCCTCTGATGAT+TGG 0.387057 2.2:+46579628 MS.gene025201:CDS
GAACCAGCCACAGTGTTATC+AGG 0.387320 2.2:-46578461 None:intergenic
CAAATTAAAGATGAAGATCT+AGG 0.387556 2.2:+46579532 MS.gene025201:CDS
TTTGGGGTGAATTCTGCAAC+AGG 0.396738 2.2:+46579251 MS.gene025201:CDS
GATGAAGATCTAGGGCGTTC+AGG 0.398577 2.2:+46579541 MS.gene025201:CDS
ATGAGTGATGTCCTTAGAAA+TGG 0.402311 2.2:-46579473 None:intergenic
CTCCAAATGCTGGTAGTAAT+GGG 0.405201 2.2:+46578603 MS.gene025201:CDS
CCAGCCTTTACTGCTAAAAT+GGG 0.406397 2.2:-46579316 None:intergenic
GAACCTGGTTTGATCAAGTT+GGG 0.410401 2.2:+46579431 MS.gene025201:CDS
AGCGGAGGAGGTTGGTATTG+AGG 0.411724 2.2:-46578560 None:intergenic
TCTGAATCCACAAATGACTT+TGG 0.414308 2.2:-46578416 None:intergenic
ATACCTGATTGTGAAATCAT+TGG 0.415649 2.2:+46578389 MS.gene025201:CDS
CTTCAAGAGATGGTGGATGC+TGG 0.419540 2.2:+46579286 MS.gene025201:CDS
AGAACCTGGTTTGATCAAGT+TGG 0.422430 2.2:+46579430 MS.gene025201:CDS
CAATCATTTGAAGAATGAAT+GGG 0.424161 2.2:+46578979 MS.gene025201:CDS
TTCCCAATGATTTCACAATC+AGG 0.429166 2.2:-46578392 None:intergenic
TGGGAATCCAAAGTCATTTG+TGG 0.432048 2.2:+46578409 MS.gene025201:CDS
GGCGTTCAGGCAAGCCAGAC+TGG 0.443599 2.2:+46579554 MS.gene025201:CDS
TCTTCAATGAGTTTGTGTTT+AGG 0.444396 2.2:+46579908 MS.gene025201:CDS
CGAAGTCAGGAGACACAAAA+TGG 0.444863 2.2:+46579677 MS.gene025201:CDS
AGGATCATTCAGGATTAACT+TGG 0.448406 2.2:+46579767 MS.gene025201:CDS
GAAGCAGGGGAGGAGATTAT+GGG 0.448431 2.2:+46579805 MS.gene025201:CDS
ATTCCGATGGAGGTGAAATA+CGG 0.449887 2.2:+46578852 MS.gene025201:CDS
TTCAAGAGATGGTGGATGCT+GGG 0.453587 2.2:+46579287 MS.gene025201:CDS
TTTGATCTCCTTGATTCCGA+TGG 0.453893 2.2:+46578839 MS.gene025201:CDS
GCTCCAAATGCTGGTAGTAA+TGG 0.459212 2.2:+46578602 MS.gene025201:CDS
GAATTCAGTGGAAAGTCTAT+AGG 0.459727 2.2:+46579349 MS.gene025201:CDS
TTTAGCAGTAAAGGCTGGTA+AGG 0.460163 2.2:+46579321 MS.gene025201:CDS
TACCTGATTGTGAAATCATT+GGG 0.460436 2.2:+46578390 MS.gene025201:CDS
TGATTGAAATTCTTCTGTGC+AGG 0.460517 2.2:-46578962 None:intergenic
AATAAGAAAGTGACGAAGTC+AGG 0.461922 2.2:+46579664 MS.gene025201:CDS
TACAGTAGTTAAAGCAGATA+AGG 0.461941 2.2:+46579978 MS.gene025201:CDS
GTAACTGCTTTCCAGGAAGC+AGG 0.462729 2.2:+46579790 MS.gene025201:CDS
TAAAGCGGAGGAGGTTGGTA+TGG 0.464313 2.2:-46578653 None:intergenic
GCGGTGAGATTCACCGCCAT+TGG 0.468725 2.2:-46575944 None:intergenic
GAATGAATGGGAAATTATGC+TGG 0.470378 2.2:+46578991 MS.gene025201:CDS
GAAGAAGACGGTAACGTTGT+TGG 0.471806 2.2:-46576063 None:intergenic
CCGTTTCTATGAAGCAATTG+AGG 0.474581 2.2:+46578901 MS.gene025201:CDS
AAGGCAAGGGTTACTGCAAA+AGG 0.476738 2.2:+46578767 MS.gene025201:CDS
GTTCCCATCGTAAGGAAGAA+TGG 0.477384 2.2:+46579163 MS.gene025201:CDS
GTATTTGTTGAAGTACGAAC+AGG 0.477668 2.2:+46579846 MS.gene025201:CDS
GCTCAAAATGCTGGTAGTAA+TGG 0.484784 2.2:+46578512 MS.gene025201:CDS
TTCGTCACTTTCTTATTGCA+CGG 0.485857 2.2:-46579658 None:intergenic
TGTTGTAAAGCGGAGGAGGT+TGG 0.489573 2.2:-46578568 None:intergenic
AATGATCCTGGATTTGAGCT+TGG 0.492318 2.2:-46579753 None:intergenic
AAGTTAATCCTGAATGATCC+TGG 0.493959 2.2:-46579765 None:intergenic
TAGGGATTTAAAGCAGCTAT+AGG 0.496621 2.2:-46578725 None:intergenic
TTTCACCTCCATCGGAATCA+AGG 0.500395 2.2:-46578847 None:intergenic
TATGCTGGATTTAAATTCAA+CGG 0.500855 2.2:+46579006 MS.gene025201:CDS
TACCCGTATTTCACCTCCAT+CGG 0.501159 2.2:-46578855 None:intergenic
GCTATAGGTATTACACGTGC+TGG 0.503122 2.2:-46578710 None:intergenic
GCTATTCCGGCGATAATCGC+CGG 0.503326 2.2:+46575971 MS.gene025201:CDS
TAGATGCAACCAGGAGTTTG+AGG 0.505007 2.2:+46579708 MS.gene025201:CDS
AATTTGGCTGCTCCAAATGC+TGG 0.507899 2.2:+46578593 MS.gene025201:CDS
TGCTATCCTTGATGTTATTG+GGG 0.509422 2.2:+46579117 MS.gene025201:CDS
AGCGGAGGAGGTTGGTATGG+AGG 0.511425 2.2:-46578650 None:intergenic
GATTATTATGGTGCTTAACA+TGG 0.514700 2.2:+46578358 MS.gene025201:CDS
ATCCTTCAGTTCCCATCGTA+AGG 0.516057 2.2:+46579155 MS.gene025201:CDS
ACGTCGCCGGCGATTATCGC+CGG 0.516823 2.2:-46575977 None:intergenic
TTCTATGAAGCAATTGAGGT+TGG 0.517168 2.2:+46578905 MS.gene025201:CDS
ATTCCATTCTTCCTTACGAT+GGG 0.519102 2.2:-46579166 None:intergenic
ACAGTCTCAATGTCACTGAT+AGG 0.519707 2.2:-46579085 None:intergenic
GATCTCCTTGATTCCGATGG+AGG 0.519739 2.2:+46578842 MS.gene025201:CDS
CGGTTTGGCGTCGACGTCGC+CGG 0.521923 2.2:-46575990 None:intergenic
TATAACAATGCTCGTGGAGA+TGG 0.523700 2.2:+46578803 MS.gene025201:CDS
CGACCTTTGTAAAGCGGAGG+AGG 0.525294 2.2:-46578662 None:intergenic
TCAGGGTAGGTGGGCCATCA+AGG 0.528250 2.2:+46578748 MS.gene025201:CDS
CTGAAGGAGAATTGTTGTCT+AGG 0.528586 2.2:-46579061 None:intergenic
AATTTGGCTGCTCAAAATGC+TGG 0.530811 2.2:+46578503 MS.gene025201:CDS
GTTATATAATGAGGAACAGA+AGG 0.531961 2.2:+46579948 MS.gene025201:CDS
CATTCCATTCTTCCTTACGA+TGG 0.533999 2.2:-46579167 None:intergenic
GAGCTTTGCCCAGATGAGGA+TGG 0.534821 2.2:+46579031 MS.gene025201:CDS
CCTGGATTTGAGCTTGGAGA+AGG 0.534963 2.2:-46579747 None:intergenic
AATCACATTCCTCAAACTCC+TGG 0.536282 2.2:-46579717 None:intergenic
ATTTCTAAGGACATCACTCA+TGG 0.537700 2.2:+46579475 MS.gene025201:CDS
TATCGCCGGAATAGCGTTTG+CGG 0.537944 2.2:-46575963 None:intergenic
CAAAGAGGAGTTATATAATG+AGG 0.538505 2.2:+46579939 MS.gene025201:CDS
GAGAACTTGAAGTAACGGTT+TGG 0.539039 2.2:-46576005 None:intergenic
ATGGCCCACCTACCCTGATA+GGG 0.544473 2.2:-46578743 None:intergenic
AAAGTTTACTTGATATCGAA+AGG 0.544592 2.2:+46578929 MS.gene025201:CDS
TAAATCCCTATCAGGGTAGG+TGG 0.547460 2.2:+46578738 MS.gene025201:CDS
GTAGGTGGGCCATCAAGGCA+AGG 0.549490 2.2:+46578753 MS.gene025201:CDS
TTCCTTACGATGGGAACTGA+AGG 0.549709 2.2:-46579157 None:intergenic
TGGTATTGAGGTTGAACTGT+TGG 0.550725 2.2:-46578548 None:intergenic
TTTCCCAACTTGATCAAACC+AGG 0.553038 2.2:-46579434 None:intergenic
AGGCTCAGACCTTAAGAACC+TGG 0.553217 2.2:+46579416 MS.gene025201:CDS
CTTTGTAAAGCGGAGGAGGT+TGG 0.553943 2.2:-46578658 None:intergenic
AGAGTGTTGAGCTAACACTT+TGG 0.559856 2.2:+46579233 MS.gene025201:CDS
TGGAATGGAAACACTGAGAA+GGG 0.560059 2.2:+46579183 MS.gene025201:CDS
CGCCGCTATAACAATGCTCG+TGG 0.561907 2.2:+46578797 MS.gene025201:CDS
CCTTCTCCAAGCTCAAATCC+AGG 0.562294 2.2:+46579747 MS.gene025201:CDS
CCTCAATTGCTTCATAGAAA+CGG 0.565250 2.2:-46578901 None:intergenic
CATCGTAAGGAAGAATGGAA+TGG 0.565891 2.2:+46579168 MS.gene025201:CDS
ATGGAATGGAAACACTGAGA+AGG 0.567325 2.2:+46579182 MS.gene025201:CDS
TGCTTTCCAGGAAGCAGGGG+AGG 0.568330 2.2:+46579795 MS.gene025201:CDS
CCTCCGCTTTACAAAGGTCG+TGG 0.571787 2.2:+46578665 MS.gene025201:CDS
TTGCCTGATAACACTGTGGC+TGG 0.572437 2.2:+46578458 MS.gene025201:CDS
TAACTGCTTTCCAGGAAGCA+GGG 0.573726 2.2:+46579791 MS.gene025201:CDS
TCAAGAGATGGTGGATGCTG+GGG 0.574359 2.2:+46579288 MS.gene025201:CDS
AAATTAAAGATGAAGATCTA+GGG 0.575955 2.2:+46579533 MS.gene025201:CDS
GGTTGAGCTTTGCCCAGATG+AGG 0.577862 2.2:+46579027 MS.gene025201:CDS
GCTGCTTTAAATCCCTATCA+GGG 0.580315 2.2:+46578731 MS.gene025201:CDS
GGGCAAGCTGTGTAACAAAA+CGG 0.581067 2.2:-46579616 None:intergenic
TGGTATGGAGGTTGAACTGT+TGG 0.582038 2.2:-46578638 None:intergenic
ATGTCGAGAACTTGAAGTAA+CGG 0.582274 2.2:-46576010 None:intergenic
CAAGCTACAATCACTGCCTA+CGG 0.586389 2.2:-46580050 None:intergenic
GTATAGAACCATCCTCATCT+GGG 0.586999 2.2:-46579039 None:intergenic
AATGTCACTGATAGGTCTGA+AGG 0.587612 2.2:-46579077 None:intergenic
TTTCTAAGGACATCACTCAT+GGG 0.588441 2.2:+46579476 MS.gene025201:CDS
AACTGCTTTCCAGGAAGCAG+GGG 0.589254 2.2:+46579792 MS.gene025201:CDS
AGGACAAAAGCTTCAAGAGA+TGG 0.592318 2.2:+46579276 MS.gene025201:CDS
TTCCGATGGAGGTGAAATAC+GGG 0.595001 2.2:+46578853 MS.gene025201:CDS
GGTAAGGTTAATGAATTCAG+TGG 0.596983 2.2:+46579337 MS.gene025201:CDS
ACAAAAGCTTCAAGAGATGG+TGG 0.598927 2.2:+46579279 MS.gene025201:CDS
TGAATTATTCTGCAGAGAGT+AGG 0.600929 2.2:+46580001 MS.gene025201:CDS
CTCCACGAGCATTGTTATAG+CGG 0.600995 2.2:-46578799 None:intergenic
ATCGGTCCTCATGAATGATA+CGG 0.601840 2.2:-46579593 None:intergenic
CATAGCGTGATGAGACGAAA+CGG 0.603251 2.2:-46576095 None:intergenic
TAGGTGGGCCATCAAGGCAA+GGG 0.604948 2.2:+46578754 MS.gene025201:CDS
TCACAACCCCAATAACATCA+AGG 0.606648 2.2:-46579123 None:intergenic
CTTTAAATCCCTATCAGGGT+AGG 0.611287 2.2:+46578735 MS.gene025201:CDS
AAATACTTGCGATTCTGAAG+CGG 0.611376 2.2:-46576202 None:intergenic
GTCGATCTCCAATCATCAGA+GGG 0.611616 2.2:-46579636 None:intergenic
GGATCATTCAGGATTAACTT+GGG 0.613069 2.2:+46579768 MS.gene025201:CDS
GACTCGGTCGTTGAGTTGAG+CGG 0.615017 2.2:-46576122 None:intergenic
TTCTTAAGGTCTGAGCCTCA+GGG 0.623006 2.2:-46579411 None:intergenic
GTTTAGGCTGAAAATCAAAG+AGG 0.625551 2.2:+46579924 MS.gene025201:CDS
GGTGAATTCTGCAACAGGGA+AGG 0.626099 2.2:+46579256 MS.gene025201:CDS
TTCTAAGGACATCACTCATG+GGG 0.629562 2.2:+46579477 MS.gene025201:CDS
AGCTGTGTAACAAAACGGAT+CGG 0.634971 2.2:-46579611 None:intergenic
GCCAGACTGGATAACAATGA+GGG 0.637901 2.2:+46579567 MS.gene025201:CDS
GGTCGATCTCCAATCATCAG+AGG 0.638969 2.2:-46579637 None:intergenic
AAATCCCTATCAGGGTAGGT+GGG 0.640512 2.2:+46578739 MS.gene025201:CDS
CAACCTCCTCCGCTTTACAA+AGG 0.641625 2.2:+46578659 MS.gene025201:CDS
TTTGTTGAAGTACGAACAGG+AGG 0.644248 2.2:+46579849 MS.gene025201:CDS
GTGATGAGACGAAACGGCGT+CGG 0.651118 2.2:-46576089 None:intergenic
AGCCAGACTGGATAACAATG+AGG 0.656016 2.2:+46579566 MS.gene025201:CDS
CAGCCTTTACTGCTAAAATG+GGG 0.656745 2.2:-46579315 None:intergenic
TAACTCGTCCAGTATTGACT+CGG 0.656872 2.2:-46576138 None:intergenic
GCACCACGACCTTTGTAAAG+CGG 0.657064 2.2:-46578668 None:intergenic
GTAATCGAGAAGCTGAACGA+TGG 0.661747 2.2:-46576170 None:intergenic
CCACGACCTTTGTAAAGCGG+AGG 0.662907 2.2:-46578665 None:intergenic
GCAGTGTGATAGATGCAACC+AGG 0.664374 2.2:+46579699 MS.gene025201:CDS
AATACTGGACGAGTTAAGCA+AGG 0.673990 2.2:+46576145 MS.gene025201:CDS
GGGCAACCGTATCATTCATG+AGG 0.684770 2.2:+46579587 MS.gene025201:CDS
AGTGTTGAGCTAACACTTTG+GGG 0.692814 2.2:+46579235 MS.gene025201:CDS
CATAAATCCAGATTTCCCTG+AGG 0.709312 2.2:+46579396 MS.gene025201:CDS
TTGGGGTGAATTCTGCAACA+GGG 0.712179 2.2:+46579252 MS.gene025201:CDS
CGGCGTCGGAGAGAAGAAGA+CGG 0.718695 2.2:-46576075 None:intergenic
AAGCAGGGGAGGAGATTATG+GGG 0.738154 2.2:+46579806 MS.gene025201:CDS
TCTAAGGACATCACTCATGG+GGG 0.753824 2.2:+46579478 MS.gene025201:CDS
AGCATTGCCTGATAACACTG+TGG 0.782811 2.2:+46578454 MS.gene025201:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAATTATTATTAATATTTC+TGG - chr2.2:46578489-46578508 None:intergenic 10.0%
!! CAGAAATATTAATAATAATT+TGG + chr2.2:46578487-46578506 MS.gene025201:CDS 10.0%
!! AAATTAAAGATGAAGATCTA+GGG + chr2.2:46579533-46579552 MS.gene025201:CDS 20.0%
!! AATTAAGCAACAAAAAAAGA+AGG - chr2.2:46576234-46576253 None:intergenic 20.0%
!! ATGTATCATCTATAATGTTT+AGG - chr2.2:46578218-46578237 None:intergenic 20.0%
!! ATTAAGCAACAAAAAAAGAA+GGG - chr2.2:46576233-46576252 None:intergenic 20.0%
!! TAACAATTAGTGTATGAATT+AGG + chr2.2:46576387-46576406 MS.gene025201:intron 20.0%
!! TAATTGTTAGTGTAAGAATT+AGG + chr2.2:46577434-46577453 MS.gene025201:intron 20.0%
!! TGTATCATCTATAATGTTTA+GGG - chr2.2:46578217-46578236 None:intergenic 20.0%
!!! AACATTTTAGGTTGAAAATT+TGG - chr2.2:46577580-46577599 None:intergenic 20.0%
!!! AATGTTTTAGGTTGAAATTT+TGG - chr2.2:46578002-46578021 None:intergenic 20.0%
!!! ATTTTCAACCTAAAATGTTA+TGG + chr2.2:46577581-46577600 MS.gene025201:intron 20.0%
!!! TATTTCTAAGAATTAGGATA+TGG + chr2.2:46576710-46576729 MS.gene025201:intron 20.0%
!!! TGTATCATCAATAACATTTT+AGG - chr2.2:46577592-46577611 None:intergenic 20.0%
!!! TGTGATTTTCACTTTTTATT+AGG + chr2.2:46576486-46576505 MS.gene025201:intron 20.0%
!!! TTATGTACATTTCACTTTTT+AGG + chr2.2:46576811-46576830 MS.gene025201:intron 20.0%
! AAAGTTTACTTGATATCGAA+AGG + chr2.2:46578929-46578948 MS.gene025201:CDS 25.0%
! AAGTTGCATTTGTAAGAATT+AGG + chr2.2:46576540-46576559 MS.gene025201:intron 25.0%
! CAAATTAAAGATGAAGATCT+AGG + chr2.2:46579532-46579551 MS.gene025201:CDS 25.0%
! CAATCATTTGAAGAATGAAT+GGG + chr2.2:46578979-46578998 MS.gene025201:CDS 25.0%
! TACATAAGTGTTATCTTCTT+TGG + chr2.2:46578045-46578064 MS.gene025201:intron 25.0%
! TATGCTGGATTTAAATTCAA+CGG + chr2.2:46579006-46579025 MS.gene025201:CDS 25.0%
! TCAATCATTTGAAGAATGAA+TGG + chr2.2:46578978-46578997 MS.gene025201:CDS 25.0%
! TTAGTGTATGAATTAGGATA+TGG + chr2.2:46576393-46576412 MS.gene025201:intron 25.0%
!! ATAATGTTTAGGGTGAAAAT+TGG - chr2.2:46578207-46578226 None:intergenic 25.0%
!! CAAATTTTGAACTAAAGCAA+TGG - chr2.2:46577380-46577399 None:intergenic 25.0%
!! GAGTTGTATTTCTAAGAATT+AGG + chr2.2:46576704-46576723 MS.gene025201:intron 25.0%
!! GTGATAGTTAAATTACGTTT+TGG + chr2.2:46577702-46577721 MS.gene025201:intron 25.0%
!!! TTATGTGCATTTCACTTTTT+AGG + chr2.2:46576652-46576671 MS.gene025201:intron 25.0%
AACATTGTAGATGATGCATT+TGG + chr2.2:46578016-46578035 MS.gene025201:intron 30.0%
AACGTTCTGATAGATGTATT+TGG + chr2.2:46576855-46576874 MS.gene025201:intron 30.0%
AATGCTATCCTTGATGTTAT+TGG + chr2.2:46579115-46579134 MS.gene025201:CDS 30.0%
AATGTTATGGATGATGCATT+TGG + chr2.2:46577810-46577829 MS.gene025201:intron 30.0%
ACTATAACACTTTATTGTGG+CGG - chr2.2:46577208-46577227 None:intergenic 30.0%
AGATGATACATTAGAGCTTA+TGG + chr2.2:46578227-46578246 MS.gene025201:intron 30.0%
ATACCTGATTGTGAAATCAT+TGG + chr2.2:46578389-46578408 MS.gene025201:CDS 30.0%
ATGCTATCCTTGATGTTATT+GGG + chr2.2:46579116-46579135 MS.gene025201:CDS 30.0%
CATTTGTAAGAATTAGGTGA+TGG + chr2.2:46576546-46576565 MS.gene025201:intron 30.0%
GAGTGATTAGTGATAGTATT+AGG + chr2.2:46577656-46577675 MS.gene025201:intron 30.0%
GATTATTATGGTGCTTAACA+TGG + chr2.2:46578358-46578377 MS.gene025201:CDS 30.0%
GATTTCACAATCAGGTATTA+TGG - chr2.2:46578387-46578406 None:intergenic 30.0%
GTTATATAATGAGGAACAGA+AGG + chr2.2:46579948-46579967 MS.gene025201:CDS 30.0%
GTTATCACATTTCATCAACA+AGG - chr2.2:46576738-46576757 None:intergenic 30.0%
TACACTAACAATTAACCCAA+GGG - chr2.2:46577428-46577447 None:intergenic 30.0%
TACAGTAGTTAAAGCAGATA+AGG + chr2.2:46579978-46579997 MS.gene025201:CDS 30.0%
TACCTGATTGTGAAATCATT+GGG + chr2.2:46578390-46578409 MS.gene025201:CDS 30.0%
TAGTCAAATAGCAACTATAG+CGG - chr2.2:46577232-46577251 None:intergenic 30.0%
TCCGCTTTACAACAAAAATT+TGG + chr2.2:46578577-46578596 MS.gene025201:CDS 30.0%
TCTTCAATGAGTTTGTGTTT+AGG + chr2.2:46579908-46579927 MS.gene025201:CDS 30.0%
TGATTAATGTTATGGAACCT+CGG + chr2.2:46577875-46577894 MS.gene025201:intron 30.0%
TTACACTAACAATTAACCCA+AGG - chr2.2:46577429-46577448 None:intergenic 30.0%
TTCCTTGTACAGGATTATTA+TGG + chr2.2:46578346-46578365 MS.gene025201:intron 30.0%
TTGAATCTAAAGGACAATTC+TGG + chr2.2:46579208-46579227 MS.gene025201:CDS 30.0%
! AATGCATCATAACTGACTTT+AGG + chr2.2:46578282-46578301 MS.gene025201:intron 30.0%
! GTGATGGAATCTTATATTGA+TGG + chr2.2:46576562-46576581 MS.gene025201:intron 30.0%
! TGCATCATCCATAACATTTT+AGG - chr2.2:46577808-46577827 None:intergenic 30.0%
! TGCATCATCTACAATGTTTT+AGG - chr2.2:46578014-46578033 None:intergenic 30.0%
! TTTAGTTTCTTGTATCCCTT+GGG + chr2.2:46577410-46577429 MS.gene025201:intron 30.0%
!! AAATTTTTGTTGTAAAGCGG+AGG - chr2.2:46578578-46578597 None:intergenic 30.0%
!! AATACAACTCTAGAACGATT+AGG - chr2.2:46576694-46576713 None:intergenic 30.0%
!! ATTTTATTTCCAAGTTCCGT+AGG + chr2.2:46580034-46580053 MS.gene025201:CDS 30.0%
!! GCCAAATTTTTGTTGTAAAG+CGG - chr2.2:46578581-46578600 None:intergenic 30.0%
!!! TTTTAGTTTCTTGTATCCCT+TGG + chr2.2:46577409-46577428 MS.gene025201:intron 30.0%
AAGTTAATCCTGAATGATCC+TGG - chr2.2:46579768-46579787 None:intergenic 35.0%
AATAAGAAAGTGACGAAGTC+AGG + chr2.2:46579664-46579683 MS.gene025201:CDS 35.0%
AGGATCATTCAGGATTAACT+TGG + chr2.2:46579767-46579786 MS.gene025201:CDS 35.0%
ATGAGTGATGTCCTTAGAAA+TGG - chr2.2:46579476-46579495 None:intergenic 35.0%
ATGTCGAGAACTTGAAGTAA+CGG - chr2.2:46576013-46576032 None:intergenic 35.0%
ATTATCATAGTTCACTACCG+AGG - chr2.2:46577895-46577914 None:intergenic 35.0%
ATTCCATTCTTCCTTACGAT+GGG - chr2.2:46579169-46579188 None:intergenic 35.0%
CACCATAATAATCCTGTACA+AGG - chr2.2:46578351-46578370 None:intergenic 35.0%
CCTCAATTGCTTCATAGAAA+CGG - chr2.2:46578904-46578923 None:intergenic 35.0%
CTCAAAATGCTGGTAGTAAT+GGG + chr2.2:46578513-46578532 MS.gene025201:CDS 35.0%
GAATGAATGGGAAATTATGC+TGG + chr2.2:46578991-46579010 MS.gene025201:CDS 35.0%
GAATTCAGTGGAAAGTCTAT+AGG + chr2.2:46579349-46579368 MS.gene025201:CDS 35.0%
GGATCATTCAGGATTAACTT+GGG + chr2.2:46579768-46579787 MS.gene025201:CDS 35.0%
GGCACTATAACACTTTATTG+TGG - chr2.2:46577211-46577230 None:intergenic 35.0%
GGTAAGGTTAATGAATTCAG+TGG + chr2.2:46579337-46579356 MS.gene025201:CDS 35.0%
GTAACTTCAGTGAAGAATTG+TGG + chr2.2:46578093-46578112 MS.gene025201:intron 35.0%
GTCAAATAGCTGTCAAAACA+TGG - chr2.2:46576975-46576994 None:intergenic 35.0%
TCTGAATCCACAAATGACTT+TGG - chr2.2:46578419-46578438 None:intergenic 35.0%
TGAATTATTCTGCAGAGAGT+AGG + chr2.2:46580001-46580020 MS.gene025201:CDS 35.0%
TGATTGAAATTCTTCTGTGC+AGG - chr2.2:46578965-46578984 None:intergenic 35.0%
TGCTATCCTTGATGTTATTG+GGG + chr2.2:46579117-46579136 MS.gene025201:CDS 35.0%
TGCTTCTCTATCCATTTCTA+AGG + chr2.2:46579462-46579481 MS.gene025201:CDS 35.0%
TGGGCGAATGATTAATGTTA+TGG + chr2.2:46577867-46577886 MS.gene025201:intron 35.0%
TGGTGCAGTTATGAAAAATG+AGG + chr2.2:46578685-46578704 MS.gene025201:CDS 35.0%
TGTTAGATCGTGGAAAATAG+TGG + chr2.2:46576887-46576906 MS.gene025201:intron 35.0%
TTCCCAATGATTTCACAATC+AGG - chr2.2:46578395-46578414 None:intergenic 35.0%
TTCTATGAAGCAATTGAGGT+TGG + chr2.2:46578905-46578924 MS.gene025201:CDS 35.0%
TTGATCAAACCAGGTTCTTA+AGG - chr2.2:46579428-46579447 None:intergenic 35.0%
! AAATACTTGCGATTCTGAAG+CGG - chr2.2:46576205-46576224 None:intergenic 35.0%
! ACATAAGTGTTAGCTTCTTG+TGG + chr2.2:46577840-46577859 MS.gene025201:intron 35.0%
! AGTTTTGCGTATCTCATTCT+TGG - chr2.2:46579506-46579525 None:intergenic 35.0%
! ATTTCTAAGGACATCACTCA+TGG + chr2.2:46579475-46579494 MS.gene025201:CDS 35.0%
! GTATTTGTTGAAGTACGAAC+AGG + chr2.2:46579846-46579865 MS.gene025201:CDS 35.0%
! GTTTTGCGTATCTCATTCTT+GGG - chr2.2:46579505-46579524 None:intergenic 35.0%
! TAGGGATTTAAAGCAGCTAT+AGG - chr2.2:46578728-46578747 None:intergenic 35.0%
! TTCGTCACTTTCTTATTGCA+CGG - chr2.2:46579661-46579680 None:intergenic 35.0%
! TTTCTAAGGACATCACTCAT+GGG + chr2.2:46579476-46579495 MS.gene025201:CDS 35.0%
!! CAGAAGTGCTTTAGTTCAAA+TGG + chr2.2:46577055-46577074 MS.gene025201:intron 35.0%
!! GTGTTTGTTTTTCCTTGTAC+AGG + chr2.2:46578336-46578355 MS.gene025201:intron 35.0%
!! GTTCAAATGGATTACATCAG+CGG + chr2.2:46577068-46577087 MS.gene025201:intron 35.0%
!! TTTCCCCATTTTAGCAGTAA+AGG + chr2.2:46579312-46579331 MS.gene025201:CDS 35.0%
!!! GAGAAGGGTTTTGAATCTAA+AGG + chr2.2:46579198-46579217 MS.gene025201:CDS 35.0%
!!! TTGTGTGCGTTTTGCTTTTT+AGG + chr2.2:46576322-46576341 MS.gene025201:intron 35.0%
AATACTGGACGAGTTAAGCA+AGG + chr2.2:46576145-46576164 MS.gene025201:CDS 40.0%
AATCACATTCCTCAAACTCC+TGG - chr2.2:46579720-46579739 None:intergenic 40.0%
AATGATCCTGGATTTGAGCT+TGG - chr2.2:46579756-46579775 None:intergenic 40.0%
AATGTCACTGATAGGTCTGA+AGG - chr2.2:46579080-46579099 None:intergenic 40.0%
AATTTGGCTGCTCAAAATGC+TGG + chr2.2:46578503-46578522 MS.gene025201:CDS 40.0%
ACAAAAGCTTCAAGAGATGG+TGG + chr2.2:46579279-46579298 MS.gene025201:CDS 40.0%
ACAGTCTCAATGTCACTGAT+AGG - chr2.2:46579088-46579107 None:intergenic 40.0%
ACCAGCCTTTACTGCTAAAA+TGG - chr2.2:46579320-46579339 None:intergenic 40.0%
AGCTGTGTAACAAAACGGAT+CGG - chr2.2:46579614-46579633 None:intergenic 40.0%
AGGACAAAAGCTTCAAGAGA+TGG + chr2.2:46579276-46579295 MS.gene025201:CDS 40.0%
ATCGGTCCTCATGAATGATA+CGG - chr2.2:46579596-46579615 None:intergenic 40.0%
ATGGAATGGAAACACTGAGA+AGG + chr2.2:46579182-46579201 MS.gene025201:CDS 40.0%
ATTCCGATGGAGGTGAAATA+CGG + chr2.2:46578852-46578871 MS.gene025201:CDS 40.0%
CAGCCTTTACTGCTAAAATG+GGG - chr2.2:46579318-46579337 None:intergenic 40.0%
CAGGAGGATGATGAAAAGTT+TGG + chr2.2:46579865-46579884 MS.gene025201:CDS 40.0%
CAGTGAAGAATTGTGGTAGT+TGG + chr2.2:46578100-46578119 MS.gene025201:intron 40.0%
CATAAATCCAGATTTCCCTG+AGG + chr2.2:46579396-46579415 MS.gene025201:CDS 40.0%
CATCGTAAGGAAGAATGGAA+TGG + chr2.2:46579168-46579187 MS.gene025201:CDS 40.0%
CATTCCATTCTTCCTTACGA+TGG - chr2.2:46579170-46579189 None:intergenic 40.0%
CCAGCCTTTACTGCTAAAAT+GGG - chr2.2:46579319-46579338 None:intergenic 40.0%
CCGTTTCTATGAAGCAATTG+AGG + chr2.2:46578901-46578920 MS.gene025201:CDS 40.0%
CTCCAAATGCTGGTAGTAAT+GGG + chr2.2:46578603-46578622 MS.gene025201:CDS 40.0%
CTGAAGGAGAATTGTTGTCT+AGG - chr2.2:46579064-46579083 None:intergenic 40.0%
CTTTAAATCCCTATCAGGGT+AGG + chr2.2:46578735-46578754 MS.gene025201:CDS 40.0%
GAGAACTTGAAGTAACGGTT+TGG - chr2.2:46576008-46576027 None:intergenic 40.0%
GCTCAAAATGCTGGTAGTAA+TGG + chr2.2:46578512-46578531 MS.gene025201:CDS 40.0%
GTATAGAACCATCCTCATCT+GGG - chr2.2:46579042-46579061 None:intergenic 40.0%
TATAACAATGCTCGTGGAGA+TGG + chr2.2:46578803-46578822 MS.gene025201:CDS 40.0%
TCACAACCCCAATAACATCA+AGG - chr2.2:46579126-46579145 None:intergenic 40.0%
TGGAATGGAAACACTGAGAA+GGG + chr2.2:46579183-46579202 MS.gene025201:CDS 40.0%
TGGGAATCCAAAGTCATTTG+TGG + chr2.2:46578409-46578428 MS.gene025201:CDS 40.0%
TTTAGCAGTAAAGGCTGGTA+AGG + chr2.2:46579321-46579340 MS.gene025201:CDS 40.0%
TTTCCCAACTTGATCAAACC+AGG - chr2.2:46579437-46579456 None:intergenic 40.0%
TTTGATCTCCTTGATTCCGA+TGG + chr2.2:46578839-46578858 MS.gene025201:CDS 40.0%
TTTGTTGAAGTACGAACAGG+AGG + chr2.2:46579849-46579868 MS.gene025201:CDS 40.0%
! AGAACCTGGTTTGATCAAGT+TGG + chr2.2:46579430-46579449 MS.gene025201:CDS 40.0%
! AGCTGCTTTAAATCCCTATC+AGG + chr2.2:46578730-46578749 MS.gene025201:CDS 40.0%
! AGTGTTGAGCTAACACTTTG+GGG + chr2.2:46579235-46579254 MS.gene025201:CDS 40.0%
! GAACCTGGTTTGATCAAGTT+GGG + chr2.2:46579431-46579450 MS.gene025201:CDS 40.0%
! GAATCAGTGTTGTTAGATCG+TGG + chr2.2:46576877-46576896 MS.gene025201:intron 40.0%
! GCTGCTTTAAATCCCTATCA+GGG + chr2.2:46578731-46578750 MS.gene025201:CDS 40.0%
! GTTAGCTTCTTCTATCTCCT+GGG + chr2.2:46577632-46577651 MS.gene025201:intron 40.0%
! TGGTATTGAGGTTGAACTGT+TGG - chr2.2:46578551-46578570 None:intergenic 40.0%
! TGTTAGCTTCTTCTATCTCC+TGG + chr2.2:46577631-46577650 MS.gene025201:intron 40.0%
! TTCTAAGGACATCACTCATG+GGG + chr2.2:46579477-46579496 MS.gene025201:CDS 40.0%
!! ACGTTGTTGGTGAGAGTTTT+TGG - chr2.2:46576053-46576072 None:intergenic 40.0%
!! AGAGTGTTGAGCTAACACTT+TGG + chr2.2:46579233-46579252 MS.gene025201:CDS 40.0%
!! GAGTGTTGAGCTAACACTTT+GGG + chr2.2:46579234-46579253 MS.gene025201:CDS 40.0%
!! GTAGTAATGGGCAGAATTTC+AGG + chr2.2:46578525-46578544 MS.gene025201:CDS 40.0%
!! TAACTCGTCCAGTATTGACT+CGG - chr2.2:46576141-46576160 None:intergenic 40.0%
!! TTTTTGTTGTAAAGCGGAGG+AGG - chr2.2:46578575-46578594 None:intergenic 40.0%
AAATCCCTATCAGGGTAGGT+GGG + chr2.2:46578739-46578758 MS.gene025201:CDS 45.0%
AACTTGGGTAACTGCTTTCC+AGG + chr2.2:46579783-46579802 MS.gene025201:CDS 45.0%
AAGGCAAGGGTTACTGCAAA+AGG + chr2.2:46578767-46578786 MS.gene025201:CDS 45.0%
AATTTGGCTGCTCCAAATGC+TGG + chr2.2:46578593-46578612 MS.gene025201:CDS 45.0%
AGCATTGCCTGATAACACTG+TGG + chr2.2:46578454-46578473 MS.gene025201:CDS 45.0%
AGCCAGACTGGATAACAATG+AGG + chr2.2:46579566-46579585 MS.gene025201:CDS 45.0%
ATCCTTCAGTTCCCATCGTA+AGG + chr2.2:46579155-46579174 MS.gene025201:CDS 45.0%
CATAGCGTGATGAGACGAAA+CGG - chr2.2:46576098-46576117 None:intergenic 45.0%
CGAAGTCAGGAGACACAAAA+TGG + chr2.2:46579677-46579696 MS.gene025201:CDS 45.0%
CTATCACTAATCACTCTCCC+AGG - chr2.2:46577652-46577671 None:intergenic 45.0%
GAAGAAGACGGTAACGTTGT+TGG - chr2.2:46576066-46576085 None:intergenic 45.0%
GCCAGACTGGATAACAATGA+GGG + chr2.2:46579567-46579586 MS.gene025201:CDS 45.0%
GCTATAGGTATTACACGTGC+TGG - chr2.2:46578713-46578732 None:intergenic 45.0%
GCTCAAATCCAGGATCATTC+AGG + chr2.2:46579757-46579776 MS.gene025201:CDS 45.0%
GCTCCAAATGCTGGTAGTAA+TGG + chr2.2:46578602-46578621 MS.gene025201:CDS 45.0%
GGATTACATCAGCGGTACTA+TGG + chr2.2:46577076-46577095 MS.gene025201:intron 45.0%
GGGCAAGCTGTGTAACAAAA+CGG - chr2.2:46579619-46579638 None:intergenic 45.0%
GGTATAGAACCATCCTCATC+TGG - chr2.2:46579043-46579062 None:intergenic 45.0%
GTAATCGAGAAGCTGAACGA+TGG - chr2.2:46576173-46576192 None:intergenic 45.0%
GTCGATCTCCAATCATCAGA+GGG - chr2.2:46579639-46579658 None:intergenic 45.0%
GTTCCCATCGTAAGGAAGAA+TGG + chr2.2:46579163-46579182 MS.gene025201:CDS 45.0%
TAAATCCCTATCAGGGTAGG+TGG + chr2.2:46578738-46578757 MS.gene025201:CDS 45.0%
TAACTGCTTTCCAGGAAGCA+GGG + chr2.2:46579791-46579810 MS.gene025201:CDS 45.0%
TACCCGTATTTCACCTCCAT+CGG - chr2.2:46578858-46578877 None:intergenic 45.0%
TAGATGCAACCAGGAGTTTG+AGG + chr2.2:46579708-46579727 MS.gene025201:CDS 45.0%
TCAGGCAATGCTTTCTGAAC+TGG - chr2.2:46578446-46578465 None:intergenic 45.0%
TCTAAGGACATCACTCATGG+GGG + chr2.2:46579478-46579497 MS.gene025201:CDS 45.0%
TGCCCATTACTACCAGCATT+TGG - chr2.2:46578518-46578537 None:intergenic 45.0%
TGGTATGGAGGTTGAACTGT+TGG - chr2.2:46578641-46578660 None:intergenic 45.0%
TTCCGATGGAGGTGAAATAC+GGG + chr2.2:46578853-46578872 MS.gene025201:CDS 45.0%
TTCCTTACGATGGGAACTGA+AGG - chr2.2:46579160-46579179 None:intergenic 45.0%
TTCTTAAGGTCTGAGCCTCA+GGG - chr2.2:46579414-46579433 None:intergenic 45.0%
TTGGGGTGAATTCTGCAACA+GGG + chr2.2:46579252-46579271 MS.gene025201:CDS 45.0%
TTTCACCTCCATCGGAATCA+AGG - chr2.2:46578850-46578869 None:intergenic 45.0%
! CTCCACGAGCATTGTTATAG+CGG - chr2.2:46578802-46578821 None:intergenic 45.0%
! GTTAGCTTCTTGTGGCTCTT+GGG + chr2.2:46577848-46577867 MS.gene025201:intron 45.0%
! TGTTAGCTTCTTGTGGCTCT+TGG + chr2.2:46577847-46577866 MS.gene025201:intron 45.0%
! TTTGGGGTGAATTCTGCAAC+AGG + chr2.2:46579251-46579270 MS.gene025201:CDS 45.0%
!! CCCATTTTAGCAGTAAAGGC+TGG + chr2.2:46579316-46579335 MS.gene025201:CDS 45.0%
!! TTCAAGAGATGGTGGATGCT+GGG + chr2.2:46579287-46579306 MS.gene025201:CDS 45.0%
AACTGCTTTCCAGGAAGCAG+GGG + chr2.2:46579792-46579811 MS.gene025201:CDS 50.0%
AAGCAGGGGAGGAGATTATG+GGG + chr2.2:46579806-46579825 MS.gene025201:CDS 50.0%
ACAGCTTGCCCTCTGATGAT+TGG + chr2.2:46579628-46579647 MS.gene025201:CDS 50.0%
AGGCTCAGACCTTAAGAACC+TGG + chr2.2:46579416-46579435 MS.gene025201:CDS 50.0%
CAACCTCCTCCGCTTTACAA+AGG + chr2.2:46578569-46578588 MS.gene025201:CDS 50.0%
CCTGGATTTGAGCTTGGAGA+AGG - chr2.2:46579750-46579769 None:intergenic 50.0%
CCTTCTCCAAGCTCAAATCC+AGG + chr2.2:46579747-46579766 MS.gene025201:CDS 50.0%
CTCAACGACCGAGTCAATAC+TGG + chr2.2:46576130-46576149 MS.gene025201:CDS 50.0%
CTTTGTAAAGCGGAGGAGGT+TGG - chr2.2:46578661-46578680 None:intergenic 50.0%
GAACCAGCCACAGTGTTATC+AGG - chr2.2:46578464-46578483 None:intergenic 50.0%
GAAGCAGGGGAGGAGATTAT+GGG + chr2.2:46579805-46579824 MS.gene025201:CDS 50.0%
GATCTCCTTGATTCCGATGG+AGG + chr2.2:46578842-46578861 MS.gene025201:CDS 50.0%
GCACCACGACCTTTGTAAAG+CGG - chr2.2:46578671-46578690 None:intergenic 50.0%
GCAGTGTGATAGATGCAACC+AGG + chr2.2:46579699-46579718 MS.gene025201:CDS 50.0%
GCCCTCATTGTTATCCAGTC+TGG - chr2.2:46579571-46579590 None:intergenic 50.0%
GGGCAACCGTATCATTCATG+AGG + chr2.2:46579587-46579606 MS.gene025201:CDS 50.0%
GGTCGATCTCCAATCATCAG+AGG - chr2.2:46579640-46579659 None:intergenic 50.0%
GGTGAATTCTGCAACAGGGA+AGG + chr2.2:46579256-46579275 MS.gene025201:CDS 50.0%
GTAACTGCTTTCCAGGAAGC+AGG + chr2.2:46579790-46579809 MS.gene025201:CDS 50.0%
GTTCTTAAGGTCTGAGCCTC+AGG - chr2.2:46579415-46579434 None:intergenic 50.0%
TATCGCCGGAATAGCGTTTG+CGG - chr2.2:46575966-46575985 None:intergenic 50.0%
TCTCACCGCAAACGCTATTC+CGG + chr2.2:46575958-46575977 MS.gene025201:CDS 50.0%
TGCAGTAACCCTTGCCTTGA+TGG - chr2.2:46578765-46578784 None:intergenic 50.0%
TGTTGTAAAGCGGAGGAGGT+TGG - chr2.2:46578571-46578590 None:intergenic 50.0%
TTGCCTGATAACACTGTGGC+TGG + chr2.2:46578458-46578477 MS.gene025201:CDS 50.0%
! GATGAAGATCTAGGGCGTTC+AGG + chr2.2:46579541-46579560 MS.gene025201:CDS 50.0%
!! CTTCAAGAGATGGTGGATGC+TGG + chr2.2:46579286-46579305 MS.gene025201:CDS 50.0%
!! TAAAGCGGAGGAGGTTGGTA+TGG - chr2.2:46578566-46578585 None:intergenic 50.0%
!! TCAAGAGATGGTGGATGCTG+GGG + chr2.2:46579288-46579307 MS.gene025201:CDS 50.0%
ATGGCCCACCTACCCTGATA+GGG - chr2.2:46578746-46578765 None:intergenic 55.0%
CCACGACCTTTGTAAAGCGG+AGG - chr2.2:46578668-46578687 None:intergenic 55.0%
CCTCCGCTTTACAAAGGTCG+TGG + chr2.2:46578665-46578684 MS.gene025201:CDS 55.0%
CGACCTTTGTAAAGCGGAGG+AGG - chr2.2:46578665-46578684 None:intergenic 55.0%
CGCCGCTATAACAATGCTCG+TGG + chr2.2:46578797-46578816 MS.gene025201:CDS 55.0%
GAGCTTTGCCCAGATGAGGA+TGG + chr2.2:46579031-46579050 MS.gene025201:CDS 55.0%
GCTATTCCGGCGATAATCGC+CGG + chr2.2:46575971-46575990 MS.gene025201:CDS 55.0%
GGAAGCAGGGGAGGAGATTA+TGG + chr2.2:46579804-46579823 MS.gene025201:CDS 55.0%
GGTTGAGCTTTGCCCAGATG+AGG + chr2.2:46579027-46579046 MS.gene025201:CDS 55.0%
GTCTGAGCCTCAGGGAAATC+TGG - chr2.2:46579406-46579425 None:intergenic 55.0%
GTGATGAGACGAAACGGCGT+CGG - chr2.2:46576092-46576111 None:intergenic 55.0%
TAATCTCCTCCCCTGCTTCC+TGG - chr2.2:46579804-46579823 None:intergenic 55.0%
TAGGTGGGCCATCAAGGCAA+GGG + chr2.2:46578754-46578773 MS.gene025201:CDS 55.0%
!! AGCGGAGGAGGTTGGTATTG+AGG - chr2.2:46578563-46578582 None:intergenic 55.0%
!! GACTCGGTCGTTGAGTTGAG+CGG - chr2.2:46576125-46576144 None:intergenic 55.0%
GATGGCCCACCTACCCTGAT+AGG - chr2.2:46578747-46578766 None:intergenic 60.0%
GTAGGTGGGCCATCAAGGCA+AGG + chr2.2:46578753-46578772 MS.gene025201:CDS 60.0%
TCAGGGTAGGTGGGCCATCA+AGG + chr2.2:46578748-46578767 MS.gene025201:CDS 60.0%
TGCTTTCCAGGAAGCAGGGG+AGG + chr2.2:46579795-46579814 MS.gene025201:CDS 60.0%
! CGGCGTCGGAGAGAAGAAGA+CGG - chr2.2:46576078-46576097 None:intergenic 60.0%
!! AGCGGAGGAGGTTGGTATGG+AGG - chr2.2:46578653-46578672 None:intergenic 60.0%
ACGTCGCCGGCGATTATCGC+CGG - chr2.2:46575980-46575999 None:intergenic 65.0%
GGCGTTCAGGCAAGCCAGAC+TGG + chr2.2:46579554-46579573 MS.gene025201:CDS 65.0%
!! CGGTTTGGCGTCGACGTCGC+CGG - chr2.2:46575993-46576012 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 46575947 46580062 46575947 ID=MS.gene025201
chr2.2 mRNA 46575947 46580062 46575947 ID=MS.gene025201.t1;Parent=MS.gene025201
chr2.2 exon 46575947 46576218 46575947 ID=MS.gene025201.t1.exon1;Parent=MS.gene025201.t1
chr2.2 CDS 46575947 46576218 46575947 ID=cds.MS.gene025201.t1;Parent=MS.gene025201.t1
chr2.2 exon 46578358 46580062 46578358 ID=MS.gene025201.t1.exon2;Parent=MS.gene025201.t1
chr2.2 CDS 46578358 46580062 46578358 ID=cds.MS.gene025201.t1;Parent=MS.gene025201.t1
Gene Sequence

>MS.gene025201

ATGGCGGTGAATCTCACCGCAAACGCTATTCCGGCGATAATCGCCGGCGACGTCGACGCCAAACCGTTACTTCAAGTTCTCGACATTGCAACAATCGTAAGCACCAAAAACTCTCACCAACAACGTTACCGTCTTCTTCTCTCCGACGCCGTTTCGTCTCATCACGCTATGCTCGCCGCTCAACTCAACGACCGAGTCAATACTGGACGAGTTAAGCAAGGTTCCATCGTTCAGCTTCTCGATTACATTTGCACTCCGCTTCAGAATCGCAAGTATTTCTCTTCCCTTCTTTTTTTGTTGCTTAATTTGTTGTTCGATTAAGTGATTACTGTGATTAATCGATTATCGTGTTTTTCGATTGTTTTGATTTGAATTTTGTGTGCGTTTTGCTTTTTAGGTTAATTTAAGATGAATCTAGAACGTTCTAGATGTTGCGTTTATAACAATTAGTGTATGAATTAGGATATGGTACTTCGTTGATGAAATGTGATTGTTAAACTAAGTTTTAGTTTCTTGTTATAGTTGAAATTTGAATTTCATGTGATTTTCACTTTTTATTAGGTCATTTCAAATTTGAACTTAAAACGTTCTAGAAGTTGCATTTGTAAGAATTAGGTGATGGAATCTTATATTGATGGAATGTGATATTTGAACTATGTTCTAGATTCTTGTGATAGTTGATTTGAGATTGTTGAAATTTGAATTTTATGTGCATTTCACTTTTTAGGTCATTTCGAGTTTGAACCTAATCGTTCTAGAGTTGTATTTCTAAGAATTAGGATATGGAACCTTGTTGATGAAATGTGATAACTGACTTTTAGTTTCTTGTGATAGTTTAATTAAGATTTTGTTGCAATTTGAATTTTATGTACATTTCACTTTTTAGGTCATTCTAATTTTGAACATAAAACGTTCTGATAGATGTATTTGGAATCAGTGTTGTTAGATCGTGGAAAATAGTGGCTATTTGACAAGATTTTGAACTGAAGTGTATCGTGAAACAATAGCGATTTGTTCTAATTGTGCCATGTTTTGACAGCTATTTGACAACACTGTTGTAATAGTTCTATTGTTTACTTGAGTTTTAGTTTCTTGTAATACATGTTGTCAGAAGTGCTTTAGTTCAAATGGATTACATCAGCGGTACTATGGATTACAAAAGTGTTATTAACAATGTTTTAGTTCAAATTTTCTTAAGACACGTTTGAAATTTGTGTTGTCAATCGCATATTGCATAAAATAGCAGTTTGTTCAAATTCCGCCACAATAAAGTGTTATAGTGCCGCTATAGTTGCTATTTGACTACACTTTGTACTAAATAGTGTATTGTGAAACAATAACAATTTGTTCAAAAATTGTGTGATGCTATAGTAGCTATTTGACAATTGTGTGATGCTATAGTAGCTATTTGACAATAACACTGTTGTAATCCATTGCTTTAGTTCAAAATTTGTTGCTTAAGTTTTAGTTTCTTGTATCCCTTGGGTTAATTGTTAGTGTAAGAATTAGGATATGATAACTCAGTGATGAATTGTCAATTGCGATAGTTGAATTAAGTTTTAGTTTCTTGTCATAGTTTAAGTAAGATTGTTGTGATTTGAATTTTATGTGAAATTCAGTTTTGTATCATTTGAATTTTCAACCTAAAATGTTATTGATGATACAATTGATTATTTTACACAAGTGTTAGCTTCTTCTATCTCCTGGGAGAGTGATTAGTGATAGTATTAGGATATAGAATCTCAGTGATGAAATGTGATAGTTAAATTACGTTTTGGTTTCTTGTGATAGTTTACTTAAGATTGCTGTGTTTGAGTTTTACTTGAAATTCAGTTTTTACATCATTCCAAATTTTCAACCTAAAATGTTATGGATGATGCATTTGGTTATTTTACATAAGTGTTAGCTTCTTGTGGCTCTTGGGCGAATGATTAATGTTATGGAACCTCGGTAGTGAACTATGATAATCTAATTAAGTTTTAGTCTCTTGTGATAGTCTTGTTAAGATTGTTGCGATTTGAATATTATGTGAATTTCAGTTTTTGCATCATTCCAAAATTTCAACCTAAAACATTGTAGATGATGCATTTGGTTACTTTACATAAGTGTTATCTTCTTTGGTCACTTGACAAATGATGAGTGATATGTAACTTCAGTGAAGAATTGTGGTAGTTGGATTAAGTTTTAGTTTTTTGTGATAGTTTAATTAAGATTGTTGCGATTTGAATTTTATGTGAATTTCGTTGTTTGCATCATTCCAATTTTCACCCTAAACATTATAGATGATACATTAGAGCTTATGGATGTTTAAGAGTTGAAAGAATGTTACAGATGAAATGCATCATAACTGACTTTAGGTTTATTCTCTAAACTTGATTTGTGTGCTTCTGTGTTTGTTTTTCCTTGTACAGGATTATTATGGTGCTTAACATGGAAACCATAATACCTGATTGTGAAATCATTGGGAATCCAAAGTCATTTGTGGATTCAGAGTTACCAGTTCAGAAAGCATTGCCTGATAACACTGTGGCTGGTTCGTCCAGAAATATTAATAATAATTTGGCTGCTCAAAATGCTGGTAGTAATGGGCAGAATTTCAGGCCAACAGTTCAACCTCAATACCAACCTCCTCCGCTTTACAACAAAAATTTGGCTGCTCCAAATGCTGGTAGTAATGGGCAGAATTTCAGGCCAACAGTTCAACCTCCATACCAACCTCCTCCGCTTTACAAAGGTCGTGGTGCAGTTATGAAAAATGAGGCGCCAGCACGTGTAATACCTATAGCTGCTTTAAATCCCTATCAGGGTAGGTGGGCCATCAAGGCAAGGGTTACTGCAAAAGGAGATTTGCGCCGCTATAACAATGCTCGTGGAGATGGAAAAGTCTTCTCGTTTGATCTCCTTGATTCCGATGGAGGTGAAATACGGGTAACTTGCTTTAATGCTGTTGTTGACCGTTTCTATGAAGCAATTGAGGTTGGTAAAGTTTACTTGATATCGAAAGGTAGCTTGAAACCTGCACAGAAGAATTTCAATCATTTGAAGAATGAATGGGAAATTATGCTGGATTTAAATTCAACGGTTGAGCTTTGCCCAGATGAGGATGGTTCTATACCTAGACAACAATTCTCCTTCAGACCTATCAGTGACATTGAGACTGTTGAGAGTAATGCTATCCTTGATGTTATTGGGGTTGTGACATCTGTAAATCCTTCAGTTCCCATCGTAAGGAAGAATGGAATGGAAACACTGAGAAGGGTTTTGAATCTAAAGGACAATTCTGGCAAGAGTGTTGAGCTAACACTTTGGGGTGAATTCTGCAACAGGGAAGGACAAAAGCTTCAAGAGATGGTGGATGCTGGGGTTTTCCCCATTTTAGCAGTAAAGGCTGGTAAGGTTAATGAATTCAGTGGAAAGTCTATAGGCTCTATTTCTACTACACAGCTTTTCATAAATCCAGATTTCCCTGAGGCTCAGACCTTAAGAACCTGGTTTGATCAAGTTGGGAAAGATTCTGCTTCTCTATCCATTTCTAAGGACATCACTCATGGGGGACCCAAGAATGAGATACGCAAAACTGTGTCTCAAATTAAAGATGAAGATCTAGGGCGTTCAGGCAAGCCAGACTGGATAACAATGAGGGCAACCGTATCATTCATGAGGACCGATCCGTTTTGTTACACAGCTTGCCCTCTGATGATTGGAGATCGACCGTGCAATAAGAAAGTGACGAAGTCAGGAGACACAAAATGGCAGTGTGATAGATGCAACCAGGAGTTTGAGGAATGTGATTATCGTTACCTTCTCCAAGCTCAAATCCAGGATCATTCAGGATTAACTTGGGTAACTGCTTTCCAGGAAGCAGGGGAGGAGATTATGGGGTACTCAGCAAAAGATCTGTATTTGTTGAAGTACGAACAGGAGGATGATGAAAAGTTTGGAGATATAATCAAGAGTAGACTCTTCAATGAGTTTGTGTTTAGGCTGAAAATCAAAGAGGAGTTATATAATGAGGAACAGAAGGTGAAGATTACAGTAGTTAAAGCAGATAAGGTGAATTATTCTGCAGAGAGTAGGTATATGCTTGATTTTATTTCCAAGTTCCGTAGGCAGTGA
Protein sequence

>MS.gene025201.t1

MAVNLTANAIPAIIAGDVDAKPLLQVLDIATIVSTKNSHQQRYRLLLSDAVSSHHAMLAAQLNDRVNTGRVKQGSIVQLLDYICTPLQNRKIIMVLNMETIIPDCEIIGNPKSFVDSELPVQKALPDNTVAGSSRNINNNLAAQNAGSNGQNFRPTVQPQYQPPPLYNKNLAAPNAGSNGQNFRPTVQPPYQPPPLYKGRGAVMKNEAPARVIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEAIEVGKVYLISKGSLKPAQKNFNHLKNEWEIMLDLNSTVELCPDEDGSIPRQQFSFRPISDIETVESNAILDVIGVVTSVNPSVPIVRKNGMETLRRVLNLKDNSGKSVELTLWGEFCNREGQKLQEMVDAGVFPILAVKAGKVNEFSGKSIGSISTTQLFINPDFPEAQTLRTWFDQVGKDSASLSISKDITHGGPKNEIRKTVSQIKDEDLGRSGKPDWITMRATVSFMRTDPFCYTACPLMIGDRPCNKKVTKSGDTKWQCDRCNQEFEECDYRYLLQAQIQDHSGLTWVTAFQEAGEEIMGYSAKDLYLLKYEQEDDEKFGDIIKSRLFNEFVFRLKIKEELYNEEQKVKITVVKADKVNYSAESRYMLDFISKFRRQ