Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75670.t1 | RHN69172.1 | 98.6 | 1316 | 18 | 0 | 1 | 1316 | 1 | 1316 | 0.00E+00 | 2164 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75670.t1 | Q9SL02 | 62.2 | 1316 | 498 | 0 | 1 | 1316 | 1 | 1316 | 0.0e+00 | 1480.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75670.t1 | A0A396IUE8 | 98.6 | 1316 | 18 | 0 | 1 | 1316 | 1 | 1316 | 0.0e+00 | 2164.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049142 | MS.gene75670 | 0.80275 | 4.84E-49 | -1.69E-46 |
MS.gene049190 | MS.gene75670 | 0.882264 | 1.21E-70 | -1.69E-46 |
MS.gene049418 | MS.gene75670 | 0.840207 | 9.99E-58 | -1.69E-46 |
MS.gene049441 | MS.gene75670 | 0.802131 | 6.49E-49 | -1.69E-46 |
MS.gene049672 | MS.gene75670 | 0.808971 | 2.38E-50 | -1.69E-46 |
MS.gene049711 | MS.gene75670 | 0.833446 | 5.31E-56 | -1.69E-46 |
MS.gene049807 | MS.gene75670 | 0.818738 | 1.68E-52 | -1.69E-46 |
MS.gene049824 | MS.gene75670 | 0.850551 | 1.58E-60 | -1.69E-46 |
MS.gene049850 | MS.gene75670 | 0.828113 | 1.08E-54 | -1.69E-46 |
MS.gene050310 | MS.gene75670 | 0.805655 | 1.20E-49 | -1.69E-46 |
MS.gene050559 | MS.gene75670 | 0.802823 | 4.67E-49 | -1.69E-46 |
MS.gene050561 | MS.gene75670 | 0.805041 | 1.62E-49 | -1.69E-46 |
MS.gene050562 | MS.gene75670 | 0.801584 | 8.40E-49 | -1.69E-46 |
MS.gene050630 | MS.gene75670 | 0.846968 | 1.56E-59 | -1.69E-46 |
MS.gene051018 | MS.gene75670 | 0.81269 | 3.73E-51 | -1.69E-46 |
MS.gene051021 | MS.gene75670 | 0.882958 | 6.73E-71 | -1.69E-46 |
MS.gene051067 | MS.gene75670 | 0.807111 | 5.93E-50 | -1.69E-46 |
MS.gene051248 | MS.gene75670 | 0.821487 | 3.93E-53 | -1.69E-46 |
MS.gene051279 | MS.gene75670 | 0.852028 | 6.04E-61 | -1.69E-46 |
MS.gene05157 | MS.gene75670 | 0.823216 | 1.56E-53 | -1.69E-46 |
MS.gene051664 | MS.gene75670 | 0.820238 | 7.62E-53 | -1.69E-46 |
MS.gene051671 | MS.gene75670 | 0.800932 | 1.14E-48 | -1.69E-46 |
MS.gene051719 | MS.gene75670 | 0.84631 | 2.35E-59 | -1.69E-46 |
MS.gene051720 | MS.gene75670 | 0.860945 | 1.45E-63 | -1.69E-46 |
MS.gene051744 | MS.gene75670 | 0.854411 | 1.25E-61 | -1.69E-46 |
MS.gene052032 | MS.gene75670 | 0.803863 | 2.85E-49 | -1.69E-46 |
MS.gene052516 | MS.gene75670 | 0.81299 | 3.21E-51 | -1.69E-46 |
MS.gene052731 | MS.gene75670 | 0.822934 | 1.82E-53 | -1.69E-46 |
MS.gene052732 | MS.gene75670 | 0.848361 | 6.44E-60 | -1.69E-46 |
MS.gene053122 | MS.gene75670 | 0.814852 | 1.25E-51 | -1.69E-46 |
MS.gene053144 | MS.gene75670 | 0.89456 | 2.20E-75 | -1.69E-46 |
MS.gene053171 | MS.gene75670 | 0.820788 | 5.70E-53 | -1.69E-46 |
MS.gene053174 | MS.gene75670 | 0.816924 | 4.30E-52 | -1.69E-46 |
MS.gene053226 | MS.gene75670 | 0.834539 | 2.83E-56 | -1.69E-46 |
MS.gene053536 | MS.gene75670 | 0.827035 | 1.95E-54 | -1.69E-46 |
MS.gene053538 | MS.gene75670 | 0.825042 | 5.82E-54 | -1.69E-46 |
MS.gene053599 | MS.gene75670 | 0.819468 | 1.14E-52 | -1.69E-46 |
MS.gene054550 | MS.gene75670 | 0.828144 | 1.06E-54 | -1.69E-46 |
MS.gene054584 | MS.gene75670 | 0.902608 | 8.14E-79 | -1.69E-46 |
MS.gene055465 | MS.gene75670 | 0.857419 | 1.65E-62 | -1.69E-46 |
MS.gene055466 | MS.gene75670 | 0.842965 | 1.87E-58 | -1.69E-46 |
MS.gene055468 | MS.gene75670 | 0.822433 | 2.38E-53 | -1.69E-46 |
MS.gene055469 | MS.gene75670 | 0.814421 | 1.55E-51 | -1.69E-46 |
MS.gene055537 | MS.gene75670 | 0.881972 | 1.54E-70 | -1.69E-46 |
MS.gene055580 | MS.gene75670 | -0.859579 | 3.75E-63 | -1.69E-46 |
MS.gene055890 | MS.gene75670 | 0.825057 | 5.77E-54 | -1.69E-46 |
MS.gene055891 | MS.gene75670 | 0.834672 | 2.62E-56 | -1.69E-46 |
MS.gene056043 | MS.gene75670 | -0.825671 | 4.13E-54 | -1.69E-46 |
MS.gene056050 | MS.gene75670 | 0.806309 | 8.76E-50 | -1.69E-46 |
MS.gene056169 | MS.gene75670 | 0.867313 | 1.50E-65 | -1.69E-46 |
MS.gene056228 | MS.gene75670 | 0.882992 | 6.54E-71 | -1.69E-46 |
MS.gene056396 | MS.gene75670 | 0.842467 | 2.54E-58 | -1.69E-46 |
MS.gene056507 | MS.gene75670 | 0.820888 | 5.41E-53 | -1.69E-46 |
MS.gene05686 | MS.gene75670 | 0.800079 | 1.71E-48 | -1.69E-46 |
MS.gene057004 | MS.gene75670 | 0.800963 | 1.13E-48 | -1.69E-46 |
MS.gene057082 | MS.gene75670 | 0.817312 | 3.52E-52 | -1.69E-46 |
MS.gene057294 | MS.gene75670 | 0.811065 | 8.44E-51 | -1.69E-46 |
MS.gene057915 | MS.gene75670 | 0.806423 | 8.29E-50 | -1.69E-46 |
MS.gene058087 | MS.gene75670 | 0.811475 | 6.87E-51 | -1.69E-46 |
MS.gene058197 | MS.gene75670 | 0.813053 | 3.11E-51 | -1.69E-46 |
MS.gene058198 | MS.gene75670 | 0.809824 | 1.56E-50 | -1.69E-46 |
MS.gene058625 | MS.gene75670 | 0.80159 | 8.38E-49 | -1.69E-46 |
MS.gene058649 | MS.gene75670 | 0.826075 | 3.31E-54 | -1.69E-46 |
MS.gene058668 | MS.gene75670 | 0.857595 | 1.47E-62 | -1.69E-46 |
MS.gene05894 | MS.gene75670 | 0.813332 | 2.70E-51 | -1.69E-46 |
MS.gene059015 | MS.gene75670 | 0.825264 | 5.15E-54 | -1.69E-46 |
MS.gene059154 | MS.gene75670 | 0.861585 | 9.25E-64 | -1.69E-46 |
MS.gene059300 | MS.gene75670 | 0.810355 | 1.20E-50 | -1.69E-46 |
MS.gene059424 | MS.gene75670 | 0.81806 | 2.39E-52 | -1.69E-46 |
MS.gene059570 | MS.gene75670 | 0.801907 | 7.21E-49 | -1.69E-46 |
MS.gene059625 | MS.gene75670 | 0.822613 | 2.16E-53 | -1.69E-46 |
MS.gene060194 | MS.gene75670 | 0.802808 | 4.71E-49 | -1.69E-46 |
MS.gene060519 | MS.gene75670 | 0.841902 | 3.58E-58 | -1.69E-46 |
MS.gene060587 | MS.gene75670 | 0.834494 | 2.90E-56 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75670.t1 | MTR_3g084300 | 99.012 | 1316 | 8 | 1 | 1 | 1316 | 1 | 1311 | 0.0 | 2654 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75670.t1 | AT2G31970 | 68.997 | 1316 | 408 | 0 | 1 | 1316 | 1 | 1316 | 0.0 | 1813 |
Find 235 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGAATCCAAGCTTCAATCTT+TGG | 0.195557 | 3.3:+70611465 | MS.gene75670:CDS |
GGATGAGCCAACCACAAATT+TGG | 0.220272 | 3.3:+70615366 | MS.gene75670:CDS |
GCCTGTCCTGGGATAATTTC+TGG | 0.229131 | 3.3:-70613730 | None:intergenic |
CCAGCTCTTCCTTGACTTGC+TGG | 0.240650 | 3.3:-70612052 | None:intergenic |
CTTGTGTGATTTCCTTCTTC+AGG | 0.246655 | 3.3:-70607339 | None:intergenic |
AAAATAAGAAGGGTGCTAAA+AGG | 0.255734 | 3.3:+70607295 | MS.gene75670:CDS |
CTTATCTATGTCCTTGTATT+GGG | 0.266744 | 3.3:-70614020 | None:intergenic |
GCGATTCCACACAATGAAAA+TGG | 0.287037 | 3.3:+70614861 | MS.gene75670:CDS |
ATCTCTTATGAAGGGAGATT+TGG | 0.290588 | 3.3:+70607153 | MS.gene75670:CDS |
TCTTCTAGAGTCCTCACTTC+TGG | 0.295451 | 3.3:-70612430 | None:intergenic |
GCTTATCTATGTCCTTGTAT+TGG | 0.303062 | 3.3:-70614021 | None:intergenic |
GAAGGATCTTGAAGATAAAA+AGG | 0.307260 | 3.3:+70605037 | MS.gene75670:CDS |
TTCATCAAGATGAAGCAAAT+TGG | 0.323797 | 3.3:+70602146 | MS.gene75670:CDS |
TCTGAAAGATGCGGCCTATA+CGG | 0.324169 | 3.3:+70602537 | MS.gene75670:CDS |
GGATGGAAGCATTAAAGATT+TGG | 0.330227 | 3.3:+70604299 | MS.gene75670:CDS |
CAGAACGAAGCACTCTATTT+AGG | 0.336357 | 3.3:+70604397 | MS.gene75670:CDS |
GCAGCCAGACTTTCAGCATT+TGG | 0.345546 | 3.3:-70615394 | None:intergenic |
AGGAAATCACACAAGCATTA+AGG | 0.346359 | 3.3:+70607347 | MS.gene75670:CDS |
TGACCACGAGTTTGAGAATC+TGG | 0.349229 | 3.3:+70613282 | MS.gene75670:CDS |
TGACCAGCTTATCCAGCTTA+AGG | 0.354575 | 3.3:+70614051 | MS.gene75670:CDS |
GGGACCGACGATTAGGGTTA+AGG | 0.355058 | 3.3:-70601185 | None:intergenic |
TCAGCACTGAAGGGTGGCTT+TGG | 0.357124 | 3.3:-70604963 | None:intergenic |
AATCGATTCCAGAGCCTTGC+TGG | 0.358585 | 3.3:-70611489 | None:intergenic |
GATGGATGAGCAGAGGAATA+TGG | 0.361544 | 3.3:+70612634 | MS.gene75670:CDS |
CACCGTTGGGACCGACGATT+AGG | 0.363115 | 3.3:-70601192 | None:intergenic |
CAGAGTCTGACTGAAGCCTT+TGG | 0.365798 | 3.3:+70613199 | MS.gene75670:intron |
TTATCTTTGCGCTTGGATAA+AGG | 0.366541 | 3.3:-70613223 | None:intergenic |
TTCGCTTCACTGAAGGTTGC+GGG | 0.369897 | 3.3:+70601467 | MS.gene75670:intron |
ATTGGAGCTCGTTGCATTGC+AGG | 0.370530 | 3.3:+70612459 | MS.gene75670:CDS |
CTTAATCTGTCCCTTCGTTT+CGG | 0.374062 | 3.3:-70601495 | None:intergenic |
AAAGACTTACAAGCTGAAAC+TGG | 0.374719 | 3.3:+70602501 | MS.gene75670:CDS |
TACCCGATCCTACAGTTATA+AGG | 0.377263 | 3.3:+70614981 | MS.gene75670:CDS |
CTGGGATAATTTCTGGTGTT+CGG | 0.387310 | 3.3:-70613723 | None:intergenic |
CAAACTATTAATCCTCATTC+CGG | 0.387489 | 3.3:+70601623 | MS.gene75670:CDS |
ACTAACATGACATATCCTTT+TGG | 0.390538 | 3.3:-70608427 | None:intergenic |
AGACGAGAGAGAAAGAGAAT+TGG | 0.393062 | 3.3:+70606872 | MS.gene75670:CDS |
GGACAGGCAGAGGCTTCTTT+CGG | 0.397159 | 3.3:+70613745 | MS.gene75670:CDS |
CATCATACGGTTGGCTTTAG+CGG | 0.398104 | 3.3:+70615309 | MS.gene75670:CDS |
TAAAACATTGAAACATTTGC+TGG | 0.399701 | 3.3:+70604344 | MS.gene75670:CDS |
GGACCGACGATTAGGGTTAA+GGG | 0.401101 | 3.3:-70601184 | None:intergenic |
TTCTTTACAGACAACTGAAA+TGG | 0.401699 | 3.3:+70614162 | MS.gene75670:intron |
AAAGAAGCCTCTGCCTGTCC+TGG | 0.402949 | 3.3:-70613742 | None:intergenic |
GTGATGACGTTCTTGTTCTC+CGG | 0.413708 | 3.3:-70601151 | None:intergenic |
GAAACATTTGCTGGAGCTAA+AGG | 0.414723 | 3.3:+70604353 | MS.gene75670:CDS |
TTGCTGTGAGCGTTCTTTCT+CGG | 0.416564 | 3.3:+70611758 | MS.gene75670:CDS |
GATAATATCTCTCCGCATGC+TGG | 0.418577 | 3.3:-70615602 | None:intergenic |
TTTGCAAAGTTTGAATTTCG+AGG | 0.419600 | 3.3:-70612366 | None:intergenic |
AAACATTTGCTGGAGCTAAA+GGG | 0.420145 | 3.3:+70604354 | MS.gene75670:CDS |
AATATGGATACTGATATATC+AGG | 0.422969 | 3.3:+70612650 | MS.gene75670:CDS |
TCGAGAGATTCCTGCGCTCA+TGG | 0.424086 | 3.3:+70602087 | MS.gene75670:CDS |
CCTTCTCATCAAGATCAACT+TGG | 0.427850 | 3.3:-70612784 | None:intergenic |
AGTTGGAGAAGCTTCGTATA+TGG | 0.428659 | 3.3:+70611973 | MS.gene75670:CDS |
GATTCCATCAACTCCTCATC+AGG | 0.429278 | 3.3:-70604630 | None:intergenic |
AATCGTGTAAAATCAAGGTT+GGG | 0.429532 | 3.3:+70605005 | MS.gene75670:CDS |
AGACCATCGATAACTCCATC+TGG | 0.430893 | 3.3:+70604754 | MS.gene75670:CDS |
CGGTCCAAATGCTGAAAGTC+TGG | 0.431082 | 3.3:+70615390 | MS.gene75670:CDS |
ATCTATAATTTCCTGCATCC+TGG | 0.432798 | 3.3:-70613531 | None:intergenic |
TTCCTTGTTATGCAGGATCA+TGG | 0.434231 | 3.3:+70615500 | MS.gene75670:intron |
TGTTCTCCGGGTCGAAACTC+CGG | 0.437908 | 3.3:-70601138 | None:intergenic |
TACTGAGTTGACGAATTTGA+TGG | 0.440214 | 3.3:+70612616 | MS.gene75670:CDS |
GACTCTAGAAGAAATTCAAT+TGG | 0.441635 | 3.3:+70612441 | MS.gene75670:CDS |
TACCTTCGTGACAGTTAAAC+AGG | 0.442230 | 3.3:+70613933 | MS.gene75670:intron |
TCTTTGGACCAGCAAGGCTC+TGG | 0.443969 | 3.3:+70611481 | MS.gene75670:CDS |
GACAATCCCCAATGCTGAAA+AGG | 0.445333 | 3.3:+70612025 | MS.gene75670:CDS |
TTAGAAAGTGAGCTTGGTTG+TGG | 0.445491 | 3.3:+70612403 | MS.gene75670:CDS |
GAGGATTTAGAAAGTGAGCT+TGG | 0.448238 | 3.3:+70612397 | MS.gene75670:CDS |
CTGTGACCAGACCTAGCATT+AGG | 0.448470 | 3.3:-70601347 | None:intergenic |
TGATTACATCATCAAGTGCC+TGG | 0.450118 | 3.3:-70612085 | None:intergenic |
AGAACCTGATGAGGAGTTGA+TGG | 0.454055 | 3.3:+70604626 | MS.gene75670:intron |
TAGGGTTAAGGGTTTGAAGA+AGG | 0.454499 | 3.3:-70601173 | None:intergenic |
ATTTGGACCGTCCAAATTTG+TGG | 0.456117 | 3.3:-70615377 | None:intergenic |
AAATAAGAAGGGTGCTAAAA+GGG | 0.457318 | 3.3:+70607296 | MS.gene75670:CDS |
CTGGTCCAAAGATTGAAGCT+TGG | 0.467024 | 3.3:-70611470 | None:intergenic |
GCACAGTATAATCGAATCTC+AGG | 0.468434 | 3.3:+70615761 | MS.gene75670:CDS |
AACTTCTTCTTTAACGTGGA+AGG | 0.469089 | 3.3:-70602181 | None:intergenic |
AGAAAAGAAAGTAACCGTAT+AGG | 0.469882 | 3.3:-70602551 | None:intergenic |
GACCTTGAGGAGGAGTTTGA+AGG | 0.472709 | 3.3:+70604441 | MS.gene75670:CDS |
GAAGAAAATATGTTGAAGAT+TGG | 0.472939 | 3.3:+70613680 | MS.gene75670:CDS |
CAAAGCATCCTCAGCACTGA+AGG | 0.480099 | 3.3:-70604973 | None:intergenic |
TAACTTATCTAAACACCAAA+AGG | 0.480117 | 3.3:+70608412 | MS.gene75670:CDS |
ATGAGAGGAAGATGTAGTGC+AGG | 0.481825 | 3.3:+70615130 | MS.gene75670:CDS |
TGCTTAAAGCTTTCTTGCAC+CGG | 0.481962 | 3.3:+70601314 | MS.gene75670:CDS |
ATACCTTAAGCTGGATAAGC+TGG | 0.485539 | 3.3:-70614054 | None:intergenic |
ATGCTTGCAGCAAATTCGTC+TGG | 0.485767 | 3.3:+70606982 | MS.gene75670:intron |
AGGGAGGATTCCTTCTGATA+AGG | 0.485776 | 3.3:+70607315 | MS.gene75670:CDS |
ACTTAAATGCAAATGAAAGT+TGG | 0.485931 | 3.3:+70606642 | MS.gene75670:CDS |
TGATGACGTTCTTGTTCTCC+GGG | 0.487340 | 3.3:-70601150 | None:intergenic |
GGATCGGGTACCACCACCTT+CGG | 0.488070 | 3.3:-70614968 | None:intergenic |
CGAGAGATTCCTGCGCTCAT+GGG | 0.488137 | 3.3:+70602088 | MS.gene75670:CDS |
GCTCTTGCAACCCTTTCAAA+AGG | 0.489126 | 3.3:-70611720 | None:intergenic |
ACCGTTGGGACCGACGATTA+GGG | 0.491248 | 3.3:-70601191 | None:intergenic |
AGAAAAGAGATGTACAGAAA+AGG | 0.495584 | 3.3:+70611542 | MS.gene75670:CDS |
ATCGTCGGTCCCAACGGTGC+CGG | 0.495884 | 3.3:+70601196 | MS.gene75670:CDS |
TCGATGGTCTTCTTGAGGAC+AGG | 0.496469 | 3.3:-70604741 | None:intergenic |
CAATTGTGGAATTCTTGCAT+TGG | 0.496655 | 3.3:+70615345 | MS.gene75670:CDS |
CTCCGGTTCAAAACCGCTGC+CGG | 0.497097 | 3.3:+70601518 | MS.gene75670:CDS |
TAATCGTGTAAAATCAAGGT+TGG | 0.498249 | 3.3:+70605004 | MS.gene75670:CDS |
AGACAGGTTGAAGGAGCTGC+AGG | 0.503868 | 3.3:+70613466 | MS.gene75670:CDS |
ACTTCTTCTTTAACGTGGAA+GGG | 0.504784 | 3.3:-70602180 | None:intergenic |
GTAGAGACGTGGTTTGCATA+AGG | 0.505155 | 3.3:+70601540 | MS.gene75670:CDS |
AAAGAAAGGAGACAGGTTGA+AGG | 0.507362 | 3.3:+70613457 | MS.gene75670:CDS |
TCACTAATCGTGTAAAATCA+AGG | 0.509390 | 3.3:+70605000 | MS.gene75670:CDS |
TTCTTCAGGTCCTTATCAGA+AGG | 0.509999 | 3.3:-70607325 | None:intergenic |
TACAATGGCTACTGATTCAA+AGG | 0.511814 | 3.3:+70607117 | MS.gene75670:CDS |
CCAGCAAGTCAAGGAAGAGC+TGG | 0.515756 | 3.3:+70612052 | MS.gene75670:CDS |
TTACCTCCTAATGCTAGGTC+TGG | 0.517145 | 3.3:+70601341 | MS.gene75670:CDS |
GGACCGTCCAAATTTGTGGT+TGG | 0.519912 | 3.3:-70615373 | None:intergenic |
CACCACATTATACCTTAAGC+TGG | 0.521804 | 3.3:-70614063 | None:intergenic |
TTGTGGCAACAGACTTATAG+AGG | 0.523323 | 3.3:+70614910 | MS.gene75670:CDS |
ACCCTAATCGTCGGTCCCAA+CGG | 0.524311 | 3.3:+70601190 | MS.gene75670:CDS |
AAACCTTATAACTGTAGGAT+CGG | 0.524478 | 3.3:-70614984 | None:intergenic |
TAGCTTGCTGATCTCCCAGA+TGG | 0.524768 | 3.3:-70604769 | None:intergenic |
AGATGCTGATCAAAGGCATC+CGG | 0.530517 | 3.3:+70601119 | MS.gene75670:CDS |
ACAAACACAAATAAGCAAGT+TGG | 0.531132 | 3.3:+70604686 | MS.gene75670:CDS |
CATTCTGATTCCGAAGGTGG+TGG | 0.531974 | 3.3:+70614958 | MS.gene75670:CDS |
AAGTTGTGAAACCAGGATGC+AGG | 0.533607 | 3.3:+70613520 | MS.gene75670:CDS |
GATCAGATACAGCAGTTGGA+TGG | 0.534765 | 3.3:+70604282 | MS.gene75670:CDS |
ATAATCAGAGTCTGCACTTG+AGG | 0.534890 | 3.3:-70611946 | None:intergenic |
GTGCATTGTAGTATCTGTCC+AGG | 0.535052 | 3.3:-70614195 | None:intergenic |
TTATAGATGAACTAGACAAA+AGG | 0.537241 | 3.3:+70613546 | MS.gene75670:CDS |
AAGATGTAGTGCAGGACAGA+AGG | 0.540905 | 3.3:+70615138 | MS.gene75670:CDS |
AACCTTATAACTGTAGGATC+GGG | 0.541554 | 3.3:-70614983 | None:intergenic |
TTCAAAACACCCATGAGCGC+AGG | 0.542108 | 3.3:-70602097 | None:intergenic |
TTCTGATAAGGACCTGAAGA+AGG | 0.542753 | 3.3:+70607327 | MS.gene75670:CDS |
TAGCTATAGATGTGCTGACA+TGG | 0.543605 | 3.3:+70602063 | MS.gene75670:CDS |
TCTTAAGCAGGCCCAATACA+AGG | 0.544643 | 3.3:+70614009 | MS.gene75670:CDS |
TGACAAGGAGTTGGTTGAGC+CGG | 0.545549 | 3.3:+70612309 | MS.gene75670:CDS |
GAAAGTGAGCTTGGTTGTGG+AGG | 0.546111 | 3.3:+70612406 | MS.gene75670:CDS |
AGAAAGAACGCTCACAGCAA+GGG | 0.547047 | 3.3:-70611755 | None:intergenic |
AAAAGATCAGATACAGCAGT+TGG | 0.547994 | 3.3:+70604278 | MS.gene75670:CDS |
TATGCAAACCACGTCTCTAC+CGG | 0.549096 | 3.3:-70601537 | None:intergenic |
GGCATCTCTCATCATACGGT+TGG | 0.549446 | 3.3:+70615300 | MS.gene75670:CDS |
ACATTTGAAAATTCTTGCTG+TGG | 0.549787 | 3.3:+70611920 | MS.gene75670:CDS |
AGGTACTCTAACTCAAAGAA+AGG | 0.549818 | 3.3:+70613443 | MS.gene75670:intron |
ATTCATTCTGATTCCGAAGG+TGG | 0.550830 | 3.3:+70614955 | MS.gene75670:CDS |
ATGCAAGAATTCCACAATTG+AGG | 0.551543 | 3.3:-70615342 | None:intergenic |
ACACTGAACTCAAGATGGCA+TGG | 0.552021 | 3.3:+70606612 | MS.gene75670:CDS |
AGTGATACCTCGCCGGAATG+AGG | 0.552135 | 3.3:-70601635 | None:intergenic |
AAATAAGATTGATCTTAAGC+AGG | 0.552984 | 3.3:+70613997 | MS.gene75670:CDS |
TACTGGCATCTCTCATCATA+CGG | 0.554024 | 3.3:+70615296 | MS.gene75670:CDS |
TTGGAGCTCGTTGCATTGCA+GGG | 0.555173 | 3.3:+70612460 | MS.gene75670:CDS |
AATTATCCCAGGACAGGCAG+AGG | 0.556649 | 3.3:+70613735 | MS.gene75670:CDS |
ATCGTGTAAAATCAAGGTTG+GGG | 0.557025 | 3.3:+70605006 | MS.gene75670:CDS |
AAGAAGCCTCTGCCTGTCCT+GGG | 0.558476 | 3.3:-70613741 | None:intergenic |
AACCACGTCTCTACCGGCAG+CGG | 0.559352 | 3.3:-70601531 | None:intergenic |
GCGCTTGGATAAAGGTCCAA+AGG | 0.563340 | 3.3:-70613215 | None:intergenic |
AAATAACACTGAACTCAAGA+TGG | 0.563459 | 3.3:+70606607 | MS.gene75670:CDS |
CATGGAGGACAGGAAAGGCC+AGG | 0.565053 | 3.3:+70615518 | MS.gene75670:CDS |
AGCAAATATAACATTGCAGA+TGG | 0.567660 | 3.3:+70611678 | MS.gene75670:intron |
AACATTTGCTGGAGCTAAAG+GGG | 0.569155 | 3.3:+70604355 | MS.gene75670:CDS |
ACCAGAAATTATCCCAGGAC+AGG | 0.569225 | 3.3:+70613729 | MS.gene75670:CDS |
AGTATTCATTCTGATTCCGA+AGG | 0.570105 | 3.3:+70614952 | MS.gene75670:CDS |
TATGCAGGATCATGGAGGAC+AGG | 0.570216 | 3.3:+70615508 | MS.gene75670:intron |
GCAACAGACTTATAGAGGAC+AGG | 0.572063 | 3.3:+70614915 | MS.gene75670:CDS |
CAGGCAGAGGCTTCTTTCGG+AGG | 0.572534 | 3.3:+70613748 | MS.gene75670:CDS |
GATTACATCATCAAGTGCCT+GGG | 0.574783 | 3.3:-70612084 | None:intergenic |
CGAAAATAAAGCCCTTAATG+TGG | 0.575676 | 3.3:+70607060 | MS.gene75670:CDS |
TGTTCAACATATTTCACCAC+CGG | 0.577672 | 3.3:-70612328 | None:intergenic |
CAGATACACAAAGGCACTTG+AGG | 0.579073 | 3.3:+70602441 | MS.gene75670:intron |
AATCACGGTTGCAGAATGCA+AGG | 0.579439 | 3.3:+70612678 | MS.gene75670:CDS |
GTGAGTTACCTCCTAATGCT+AGG | 0.580225 | 3.3:+70601336 | MS.gene75670:CDS |
GTCTGGCTGCGGCTATCCTG+AGG | 0.580685 | 3.3:+70615407 | MS.gene75670:CDS |
CAACCAGATTCTCAAACTCG+TGG | 0.581086 | 3.3:-70613285 | None:intergenic |
AGAATATGTTAAACTTAGCA+AGG | 0.582751 | 3.3:+70612001 | MS.gene75670:CDS |
GAGAAAGAACGCTCACAGCA+AGG | 0.583398 | 3.3:-70611756 | None:intergenic |
CTTCAATCTTTGGACCAGCA+AGG | 0.583682 | 3.3:+70611475 | MS.gene75670:CDS |
TGTCAGCACATCTATAGCTA+AGG | 0.585988 | 3.3:-70602060 | None:intergenic |
TGCAGCAAATTCGTCTGGAG+GGG | 0.586209 | 3.3:+70606987 | MS.gene75670:intron |
TAAGAAGGGTGCTAAAAGGG+AGG | 0.586867 | 3.3:+70607299 | MS.gene75670:CDS |
ATACAGGTTGTCATGCAGAC+TGG | 0.587063 | 3.3:+70615091 | MS.gene75670:intron |
AACTGCAAAGTTGTGAAACC+AGG | 0.589548 | 3.3:+70613513 | MS.gene75670:CDS |
TTGCAGCAAATTCGTCTGGA+GGG | 0.589663 | 3.3:+70606986 | MS.gene75670:intron |
TTCAAACTCCTCCTCAAGGT+CGG | 0.589692 | 3.3:-70604439 | None:intergenic |
GTCGACAAGATGCTGATCAA+AGG | 0.589698 | 3.3:+70601112 | MS.gene75670:CDS |
AGGCATCCGGAGTTTCGACC+CGG | 0.592178 | 3.3:+70601132 | MS.gene75670:CDS |
CACTGAACTCAAGATGGCAT+GGG | 0.592682 | 3.3:+70606613 | MS.gene75670:CDS |
CTAACTCAAAGAAAGGAGAC+AGG | 0.593565 | 3.3:+70613450 | MS.gene75670:CDS |
AACGTGGAAGGGTCTTGAAG+TGG | 0.594774 | 3.3:-70602169 | None:intergenic |
ATGGCAAACCTTATAACTGT+AGG | 0.597534 | 3.3:-70614989 | None:intergenic |
CTCCCAGATGGAGTTATCGA+TGG | 0.597692 | 3.3:-70604757 | None:intergenic |
GACCATCGATAACTCCATCT+GGG | 0.597732 | 3.3:+70604755 | MS.gene75670:CDS |
CGAATTTGATGGATGAGCAG+AGG | 0.597782 | 3.3:+70612627 | MS.gene75670:CDS |
GGACGCTAAAATTGATCATG+TGG | 0.597893 | 3.3:+70604320 | MS.gene75670:CDS |
AGTGAAGACTGACAAGGAGT+TGG | 0.598043 | 3.3:+70612300 | MS.gene75670:CDS |
CTTCTCATCAAGATCAACTT+GGG | 0.600285 | 3.3:-70612783 | None:intergenic |
CCAAGTTGATCTTGATGAGA+AGG | 0.601866 | 3.3:+70612784 | MS.gene75670:CDS |
CAAGGAGTTGGTTGAGCCGG+TGG | 0.602126 | 3.3:+70612312 | MS.gene75670:CDS |
GATTGGTCAGCGCCAGCATG+CGG | 0.603404 | 3.3:+70615590 | MS.gene75670:CDS |
AGACTCTGATTATCAGCAGT+TGG | 0.605534 | 3.3:+70611956 | MS.gene75670:CDS |
AGAGCTGGATCACAAATCCC+AGG | 0.606303 | 3.3:+70612067 | MS.gene75670:CDS |
AGTTATCGATGGTCTTCTTG+AGG | 0.606694 | 3.3:-70604746 | None:intergenic |
GCATCCTCAGCACTGAAGGG+TGG | 0.608278 | 3.3:-70604969 | None:intergenic |
TTAATCACAGCAAAGAGGGA+AGG | 0.609678 | 3.3:+70611881 | MS.gene75670:intron |
ATCAAACTTCTTCTTTAACG+TGG | 0.610212 | 3.3:-70602185 | None:intergenic |
ACAAAATTATAAGAGAATTG+TGG | 0.610414 | 3.3:+70614893 | MS.gene75670:CDS |
AACTTTGCAAAAGAAAGTTG+AGG | 0.611565 | 3.3:+70612378 | MS.gene75670:CDS |
CGAAGGGACAGATTAAGCTC+CGG | 0.615621 | 3.3:+70601501 | MS.gene75670:CDS |
CGAACACCAGAAATTATCCC+AGG | 0.616060 | 3.3:+70613724 | MS.gene75670:CDS |
TGCAGGCTCACATGTCTCTG+AGG | 0.618854 | 3.3:+70604883 | MS.gene75670:intron |
ATATTTATTAGAACCTGATG+AGG | 0.621136 | 3.3:+70604617 | MS.gene75670:intron |
AAAGGAACTCCAGCAAGTCA+AGG | 0.621494 | 3.3:+70612043 | MS.gene75670:CDS |
CAATCGAGAGATGCTTACAA+TGG | 0.621502 | 3.3:+70607102 | MS.gene75670:CDS |
GATGCTGAGTTAGAAATGAG+AGG | 0.622381 | 3.3:+70615115 | MS.gene75670:CDS |
CTTGCAGCAAATTCGTCTGG+AGG | 0.623052 | 3.3:+70606985 | MS.gene75670:intron |
TGAAATGGCAAACAAAGACC+TGG | 0.623587 | 3.3:+70614177 | MS.gene75670:CDS |
CACCTTCAAACTCCTCCTCA+AGG | 0.624156 | 3.3:-70604443 | None:intergenic |
AACCGCTGCCGGTAGAGACG+TGG | 0.628955 | 3.3:+70601529 | MS.gene75670:CDS |
GAAGCAATATTCCGACCTTG+AGG | 0.629350 | 3.3:+70604428 | MS.gene75670:CDS |
ATATATCAGGTATTCAATCA+CGG | 0.630373 | 3.3:+70612663 | MS.gene75670:CDS |
TGCGGGAGAAACCGAAACGA+AGG | 0.631254 | 3.3:+70601484 | MS.gene75670:CDS |
TAAGTATCGAGAAGCTGACA+AGG | 0.632404 | 3.3:+70608349 | MS.gene75670:CDS |
TCTTCAAACTCTGAAAGATG+CGG | 0.637048 | 3.3:+70602528 | MS.gene75670:CDS |
AAAGCCACCCTTCAGTGCTG+AGG | 0.638736 | 3.3:+70604965 | MS.gene75670:CDS |
GCAATATTCCGACCTTGAGG+AGG | 0.639352 | 3.3:+70604431 | MS.gene75670:CDS |
GAGCCAACCACAAATTTGGA+CGG | 0.640463 | 3.3:+70615370 | MS.gene75670:CDS |
AGGATCATGGAGGACAGGAA+AGG | 0.641225 | 3.3:+70615513 | MS.gene75670:intron |
AAATGCTGAAAGTCTGGCTG+CGG | 0.641502 | 3.3:+70615396 | MS.gene75670:CDS |
ATCACGGTTGCAGAATGCAA+GGG | 0.643434 | 3.3:+70612679 | MS.gene75670:CDS |
CAGCTTCATTCACGACCCCA+AGG | 0.645705 | 3.3:+70601367 | MS.gene75670:CDS |
TGACAGTTAAACAGGTGCAA+AGG | 0.647336 | 3.3:+70613941 | MS.gene75670:intron |
TTAGAAGAGTGATACCTCGC+CGG | 0.648711 | 3.3:-70601642 | None:intergenic |
TGACCAGACCTAGCATTAGG+AGG | 0.650160 | 3.3:-70601344 | None:intergenic |
AAAGCATCCTCAGCACTGAA+GGG | 0.652918 | 3.3:-70604972 | None:intergenic |
GTTGTGGAGGACCAGAAGTG+AGG | 0.655223 | 3.3:+70612419 | MS.gene75670:CDS |
ACAAACTAAGAGAGAGCACA+AGG | 0.666140 | 3.3:+70606685 | MS.gene75670:CDS |
CTTGTTATGCAGGATCATGG+AGG | 0.673703 | 3.3:+70615503 | MS.gene75670:intron |
AAACCCTTAACCCTAATCGT+CGG | 0.673783 | 3.3:+70601181 | MS.gene75670:CDS |
TCGTGTAAAATCAAGGTTGG+GGG | 0.676575 | 3.3:+70605007 | MS.gene75670:CDS |
AGCATTAGGAGGTAACTCAC+CGG | 0.679949 | 3.3:-70601333 | None:intergenic |
GCGGGAGAAACCGAAACGAA+GGG | 0.681553 | 3.3:+70601485 | MS.gene75670:CDS |
GGTTATAAAGAAACTTCACA+AGG | 0.683172 | 3.3:+70602462 | MS.gene75670:CDS |
AGCTCAAGTGAAGACTGACA+AGG | 0.685303 | 3.3:+70612294 | MS.gene75670:CDS |
TATTAATCCTCATTCCGGCG+AGG | 0.712892 | 3.3:+70601628 | MS.gene75670:CDS |
TGTACTGAGCAGATACACAA+AGG | 0.715032 | 3.3:+70602432 | MS.gene75670:intron |
GCTTCGGGAAAACATCACAC+AGG | 0.717999 | 3.3:+70604233 | MS.gene75670:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.3 | gene | 70601103 | 70615797 | 70601103 | ID=MS.gene75670 |
chr3.3 | mRNA | 70601103 | 70615797 | 70601103 | ID=MS.gene75670.t1;Parent=MS.gene75670 |
chr3.3 | exon | 70601103 | 70601225 | 70601103 | ID=MS.gene75670.t1.exon1;Parent=MS.gene75670.t1 |
chr3.3 | CDS | 70601103 | 70601225 | 70601103 | ID=cds.MS.gene75670.t1;Parent=MS.gene75670.t1 |
chr3.3 | exon | 70601302 | 70601388 | 70601302 | ID=MS.gene75670.t1.exon2;Parent=MS.gene75670.t1 |
chr3.3 | CDS | 70601302 | 70601388 | 70601302 | ID=cds.MS.gene75670.t1;Parent=MS.gene75670.t1 |
chr3.3 | exon | 70601482 | 70601649 | 70601482 | ID=MS.gene75670.t1.exon3;Parent=MS.gene75670.t1 |
chr3.3 | CDS | 70601482 | 70601649 | 70601482 | ID=cds.MS.gene75670.t1;Parent=MS.gene75670.t1 |
chr3.3 | exon | 70602052 | 70602227 | 70602052 | ID=MS.gene75670.t1.exon4;Parent=MS.gene75670.t1 |
chr3.3 | CDS | 70602052 | 70602227 | 70602052 | ID=cds.MS.gene75670.t1;Parent=MS.gene75670.t1 |
chr3.3 | exon | 70602444 | 70602558 | 70602444 | ID=MS.gene75670.t1.exon5;Parent=MS.gene75670.t1 |
chr3.3 | CDS | 70602444 | 70602558 | 70602444 | ID=cds.MS.gene75670.t1;Parent=MS.gene75670.t1 |
chr3.3 | exon | 70604234 | 70604462 | 70604234 | ID=MS.gene75670.t1.exon6;Parent=MS.gene75670.t1 |
chr3.3 | CDS | 70604234 | 70604462 | 70604234 | ID=cds.MS.gene75670.t1;Parent=MS.gene75670.t1 |
chr3.3 | exon | 70604628 | 70604806 | 70604628 | ID=MS.gene75670.t1.exon7;Parent=MS.gene75670.t1 |
chr3.3 | CDS | 70604628 | 70604806 | 70604628 | ID=cds.MS.gene75670.t1;Parent=MS.gene75670.t1 |
chr3.3 | exon | 70604888 | 70605058 | 70604888 | ID=MS.gene75670.t1.exon8;Parent=MS.gene75670.t1 |
chr3.3 | CDS | 70604888 | 70605058 | 70604888 | ID=cds.MS.gene75670.t1;Parent=MS.gene75670.t1 |
chr3.3 | exon | 70606602 | 70606706 | 70606602 | ID=MS.gene75670.t1.exon9;Parent=MS.gene75670.t1 |
chr3.3 | CDS | 70606602 | 70606706 | 70606602 | ID=cds.MS.gene75670.t1;Parent=MS.gene75670.t1 |
chr3.3 | exon | 70606786 | 70606893 | 70606786 | ID=MS.gene75670.t1.exon10;Parent=MS.gene75670.t1 |
chr3.3 | CDS | 70606786 | 70606893 | 70606786 | ID=cds.MS.gene75670.t1;Parent=MS.gene75670.t1 |
chr3.3 | exon | 70606992 | 70607203 | 70606992 | ID=MS.gene75670.t1.exon11;Parent=MS.gene75670.t1 |
chr3.3 | CDS | 70606992 | 70607203 | 70606992 | ID=cds.MS.gene75670.t1;Parent=MS.gene75670.t1 |
chr3.3 | exon | 70607276 | 70607368 | 70607276 | ID=MS.gene75670.t1.exon12;Parent=MS.gene75670.t1 |
chr3.3 | CDS | 70607276 | 70607368 | 70607276 | ID=cds.MS.gene75670.t1;Parent=MS.gene75670.t1 |
chr3.3 | exon | 70608316 | 70608443 | 70608316 | ID=MS.gene75670.t1.exon13;Parent=MS.gene75670.t1 |
chr3.3 | CDS | 70608316 | 70608443 | 70608316 | ID=cds.MS.gene75670.t1;Parent=MS.gene75670.t1 |
chr3.3 | exon | 70611449 | 70611563 | 70611449 | ID=MS.gene75670.t1.exon14;Parent=MS.gene75670.t1 |
chr3.3 | CDS | 70611449 | 70611563 | 70611449 | ID=cds.MS.gene75670.t1;Parent=MS.gene75670.t1 |
chr3.3 | exon | 70611680 | 70611809 | 70611680 | ID=MS.gene75670.t1.exon15;Parent=MS.gene75670.t1 |
chr3.3 | CDS | 70611680 | 70611809 | 70611680 | ID=cds.MS.gene75670.t1;Parent=MS.gene75670.t1 |
chr3.3 | exon | 70611891 | 70612100 | 70611891 | ID=MS.gene75670.t1.exon16;Parent=MS.gene75670.t1 |
chr3.3 | CDS | 70611891 | 70612100 | 70611891 | ID=cds.MS.gene75670.t1;Parent=MS.gene75670.t1 |
chr3.3 | exon | 70612280 | 70612488 | 70612280 | ID=MS.gene75670.t1.exon17;Parent=MS.gene75670.t1 |
chr3.3 | CDS | 70612280 | 70612488 | 70612280 | ID=cds.MS.gene75670.t1;Parent=MS.gene75670.t1 |
chr3.3 | exon | 70612604 | 70612805 | 70612604 | ID=MS.gene75670.t1.exon18;Parent=MS.gene75670.t1 |
chr3.3 | CDS | 70612604 | 70612805 | 70612604 | ID=cds.MS.gene75670.t1;Parent=MS.gene75670.t1 |
chr3.3 | exon | 70613202 | 70613371 | 70613202 | ID=MS.gene75670.t1.exon19;Parent=MS.gene75670.t1 |
chr3.3 | CDS | 70613202 | 70613371 | 70613202 | ID=cds.MS.gene75670.t1;Parent=MS.gene75670.t1 |
chr3.3 | exon | 70613445 | 70613769 | 70613445 | ID=MS.gene75670.t1.exon20;Parent=MS.gene75670.t1 |
chr3.3 | CDS | 70613445 | 70613769 | 70613445 | ID=cds.MS.gene75670.t1;Parent=MS.gene75670.t1 |
chr3.3 | exon | 70613947 | 70614072 | 70613947 | ID=MS.gene75670.t1.exon21;Parent=MS.gene75670.t1 |
chr3.3 | CDS | 70613947 | 70614072 | 70613947 | ID=cds.MS.gene75670.t1;Parent=MS.gene75670.t1 |
chr3.3 | exon | 70614172 | 70614224 | 70614172 | ID=MS.gene75670.t1.exon22;Parent=MS.gene75670.t1 |
chr3.3 | CDS | 70614172 | 70614224 | 70614172 | ID=cds.MS.gene75670.t1;Parent=MS.gene75670.t1 |
chr3.3 | exon | 70614852 | 70615002 | 70614852 | ID=MS.gene75670.t1.exon23;Parent=MS.gene75670.t1 |
chr3.3 | CDS | 70614852 | 70615002 | 70614852 | ID=cds.MS.gene75670.t1;Parent=MS.gene75670.t1 |
chr3.3 | exon | 70615097 | 70615159 | 70615097 | ID=MS.gene75670.t1.exon24;Parent=MS.gene75670.t1 |
chr3.3 | CDS | 70615097 | 70615159 | 70615097 | ID=cds.MS.gene75670.t1;Parent=MS.gene75670.t1 |
chr3.3 | exon | 70615295 | 70615428 | 70615295 | ID=MS.gene75670.t1.exon25;Parent=MS.gene75670.t1 |
chr3.3 | CDS | 70615295 | 70615428 | 70615295 | ID=cds.MS.gene75670.t1;Parent=MS.gene75670.t1 |
chr3.3 | exon | 70615515 | 70615643 | 70615515 | ID=MS.gene75670.t1.exon26;Parent=MS.gene75670.t1 |
chr3.3 | CDS | 70615515 | 70615643 | 70615515 | ID=cds.MS.gene75670.t1;Parent=MS.gene75670.t1 |
chr3.3 | exon | 70615758 | 70615797 | 70615758 | ID=MS.gene75670.t1.exon27;Parent=MS.gene75670.t1 |
chr3.3 | CDS | 70615758 | 70615797 | 70615758 | ID=cds.MS.gene75670.t1;Parent=MS.gene75670.t1 |
Gene Sequence |
Protein sequence |