Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45344.t1 | XP_013442872.1 | 88.9 | 569 | 61 | 1 | 1 | 569 | 1 | 567 | 1.30E-234 | 822.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45344.t1 | Q3UMQ8 | 32.3 | 195 | 116 | 6 | 177 | 356 | 163 | 356 | 1.0e-14 | 83.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45344.t1 | G7ZX23 | 88.9 | 569 | 61 | 1 | 1 | 569 | 1 | 567 | 9.4e-235 | 822.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45344.t1 | MTR_0072s0050 | 92.091 | 569 | 43 | 1 | 1 | 569 | 1 | 567 | 0.0 | 899 |
| MS.gene45344.t1 | MTR_2g090095 | 42.387 | 486 | 248 | 13 | 87 | 558 | 63 | 530 | 1.16e-94 | 302 |
| MS.gene45344.t1 | MTR_2g090095 | 44.503 | 382 | 160 | 11 | 203 | 558 | 1 | 356 | 1.28e-78 | 255 |
| MS.gene45344.t1 | MTR_7g116780 | 35.971 | 139 | 73 | 2 | 227 | 365 | 5 | 127 | 1.88e-16 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45344.t1 | AT1G03530 | 48.171 | 328 | 108 | 7 | 73 | 350 | 213 | 528 | 1.02e-70 | 243 |
Find 166 sgRNAs with CRISPR-Local
Find 335 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCGGTGTCTCCGCCGAAAA+AGG | 0.169527 | 4.3:+54220414 | None:intergenic |
| ATCTCATTCTTTGACTTAAT+TGG | 0.194631 | 4.3:+54220057 | None:intergenic |
| GTTCCGACCCGTTGTTGTTT+TGG | 0.221291 | 4.3:+54220577 | None:intergenic |
| GCAGCACCATTTGTTAATAA+TGG | 0.254670 | 4.3:-54217251 | MS.gene45344:CDS |
| TCTCATCAGTTTCCTGTTCC+AGG | 0.263709 | 4.3:-54217026 | MS.gene45344:CDS |
| CTTTCCACTGATTTCTCAAT+AGG | 0.264015 | 4.3:+54220357 | None:intergenic |
| AGCACATGTTCAGCAAATTC+TGG | 0.272472 | 4.3:+54217539 | None:intergenic |
| CAGCGTCCTAGTCCTATTTC+TGG | 0.273259 | 4.3:-54216792 | MS.gene45344:CDS |
| TGCTGTTGAAATGGAATTCC+TGG | 0.277475 | 4.3:+54217008 | None:intergenic |
| TCGTCATCATCGTCGACGTC+TGG | 0.287420 | 4.3:-54220210 | MS.gene45344:CDS |
| GGTTTAGTTGATGAAATCTT+TGG | 0.291789 | 4.3:-54217656 | MS.gene45344:CDS |
| TGAACATGTGCTCAATAATA+AGG | 0.296281 | 4.3:-54217528 | MS.gene45344:CDS |
| TTAGGTGTCTCTGCCGCAAC+AGG | 0.297151 | 4.3:+54220489 | None:intergenic |
| AAGTTAGGACCTGCATTTAA+AGG | 0.297546 | 4.3:+54217167 | None:intergenic |
| ATTGAATTTGCAGCAAAGTT+AGG | 0.318590 | 4.3:+54217152 | None:intergenic |
| TAAGTCAAAGAATGAGATTC+AGG | 0.320696 | 4.3:-54220052 | MS.gene45344:intron |
| CCTTGTCCAATGCCTGAAAA+AGG | 0.322674 | 4.3:+54217218 | None:intergenic |
| GCCGAAAAGCTTGGTACTTC+GGG | 0.336858 | 4.3:-54220390 | MS.gene45344:CDS |
| GGGTTGTTGTGAAAATATAT+TGG | 0.347751 | 4.3:+54216932 | None:intergenic |
| TCAATAATAAGGATCTTTAC+AGG | 0.352711 | 4.3:-54217517 | MS.gene45344:CDS |
| GGAAGGATTGTTGTGGCATC+TGG | 0.363969 | 4.3:+54216880 | None:intergenic |
| GTCTCCGCCGTAACAAGGTT+CGG | 0.365379 | 4.3:+54220549 | None:intergenic |
| GCATTTGAAGGAAATGCATT+TGG | 0.370357 | 4.3:+54217080 | None:intergenic |
| CACACATCCACTGGAGGAAC+TGG | 0.373095 | 4.3:+54219288 | None:intergenic |
| CTCCTTCAATTGAGGTGAAT+GGG | 0.375047 | 4.3:-54220314 | MS.gene45344:CDS |
| TGAGAGGGGTTGCCAGAAAT+AGG | 0.376962 | 4.3:+54216780 | None:intergenic |
| CAATTTCATCCTGGTTCATC+AGG | 0.378170 | 4.3:-54216759 | MS.gene45344:CDS |
| TATCTTTCAAGCGCAGCAAC+AGG | 0.387602 | 4.3:-54216838 | MS.gene45344:CDS |
| CACGAACCCTGGTGCATACA+TGG | 0.387622 | 4.3:+54216911 | None:intergenic |
| GGTGCTGCTGCAGGTGCGTT+AGG | 0.391766 | 4.3:+54217266 | None:intergenic |
| GGAGGTAACACATGCTCTTT+CGG | 0.393457 | 4.3:+54217329 | None:intergenic |
| GGATTCATTTGCTGTTGAAA+TGG | 0.402802 | 4.3:+54216999 | None:intergenic |
| TTGTATCTCACGACATAATA+CGG | 0.413517 | 4.3:+54217620 | None:intergenic |
| TTTCGTGGTGCCGGCGGGAG+AGG | 0.418668 | 4.3:-54216717 | MS.gene45344:CDS |
| GGTTGTTGTGAAAATATATT+GGG | 0.420648 | 4.3:+54216933 | None:intergenic |
| TGTTGCTGCGCTTGAAAGAT+AGG | 0.421882 | 4.3:+54216840 | None:intergenic |
| CCTGCATTTAAAGGTTGAAA+TGG | 0.422283 | 4.3:+54217176 | None:intergenic |
| GGCCGAAAAGCTTGGTACTT+CGG | 0.424127 | 4.3:-54220391 | MS.gene45344:CDS |
| TCATTTCAATGTCACCTTGA+AGG | 0.425382 | 4.3:+54216687 | None:intergenic |
| AAGGAAATGCATTTGGAGGC+AGG | 0.440883 | 4.3:+54217087 | None:intergenic |
| TCTCCGCCGTAACAAGGTTC+GGG | 0.444284 | 4.3:+54220550 | None:intergenic |
| TGGAAACCCAAAACAACAAC+GGG | 0.446205 | 4.3:-54220584 | MS.gene45344:CDS |
| TGAAATGGAATTCCTGGAAC+AGG | 0.448959 | 4.3:+54217014 | None:intergenic |
| GATGTTCCTGCGGGGATCCA+AGG | 0.456245 | 4.3:-54217587 | MS.gene45344:CDS |
| CGTCATCATCGTCGACGTCT+GGG | 0.456745 | 4.3:-54220209 | MS.gene45344:CDS |
| GGAGAGGATGGCGACCTTCA+AGG | 0.458321 | 4.3:-54216701 | MS.gene45344:CDS |
| CAACTAAACCTAGTGGTTTG+CGG | 0.462976 | 4.3:+54217669 | None:intergenic |
| GATAAGTGATGATGAGAAGA+TGG | 0.464299 | 4.3:-54220136 | MS.gene45344:CDS |
| TCCCCATTCACCTCAATTGA+AGG | 0.464497 | 4.3:+54220312 | None:intergenic |
| CCTCCTTCAATTGAGGTGAA+TGG | 0.466670 | 4.3:-54220315 | MS.gene45344:CDS |
| ATGATGAGAAGATGGTTAGT+TGG | 0.469112 | 4.3:-54220128 | MS.gene45344:CDS |
| AATATATTGGGCTGTACCCC+AGG | 0.469285 | 4.3:+54216945 | None:intergenic |
| CCATTTCAACCTTTAAATGC+AGG | 0.469863 | 4.3:-54217176 | MS.gene45344:CDS |
| AAAAGCTTAGCAACAACAAC+GGG | 0.470692 | 4.3:-54220455 | MS.gene45344:CDS |
| CATTTCCCAACTATGATGCC+TGG | 0.471966 | 4.3:-54216963 | MS.gene45344:CDS |
| GTGGTGCCGGCGGGAGAGGA+TGG | 0.474367 | 4.3:-54216713 | MS.gene45344:CDS |
| AGAACAGAACCCTCATTAAG+AGG | 0.475235 | 4.3:+54217707 | None:intergenic |
| TGTACCCCAGGCATCATAGT+TGG | 0.475387 | 4.3:+54216957 | None:intergenic |
| TAGTTTCCATTATTAACAAA+TGG | 0.476251 | 4.3:+54217245 | None:intergenic |
| ATGAGAAAGAGGCTGAATAC+AGG | 0.476574 | 4.3:-54217430 | MS.gene45344:CDS |
| AACCCCTCTCAATTTCATCC+TGG | 0.481613 | 4.3:-54216768 | MS.gene45344:CDS |
| TGTGGTGCTACAGGTGCATT+AGG | 0.482360 | 4.3:+54217308 | None:intergenic |
| GTGGAAAGGATCACGTTAAC+GGG | 0.488457 | 4.3:-54220342 | MS.gene45344:CDS |
| ATGTTCCTGCGGGGATCCAA+GGG | 0.491170 | 4.3:-54217586 | MS.gene45344:CDS |
| AGTGGAAAGGATCACGTTAA+CGG | 0.491424 | 4.3:-54220343 | MS.gene45344:CDS |
| AGGAAAGGCTATGATGCATC+TGG | 0.493922 | 4.3:-54217497 | MS.gene45344:CDS |
| GTACCCCAGGCATCATAGTT+GGG | 0.495295 | 4.3:+54216958 | None:intergenic |
| TAATATGACATGGCATTTGA+AGG | 0.495859 | 4.3:+54217068 | None:intergenic |
| GCCGTAACAAGGTTCGGGTC+AGG | 0.496045 | 4.3:+54220555 | None:intergenic |
| CATGTATGCACCAGGGTTCG+TGG | 0.497858 | 4.3:-54216910 | MS.gene45344:CDS |
| CCGGTGTCTCCGCCGTAACA+AGG | 0.502917 | 4.3:+54220544 | None:intergenic |
| GGGGTAAATGATCAAAATCC+TGG | 0.504975 | 4.3:-54217383 | MS.gene45344:CDS |
| GTGCTGCTGCAGGTGCGTTA+GGG | 0.506725 | 4.3:+54217267 | None:intergenic |
| ATTTCCCAACTATGATGCCT+GGG | 0.507129 | 4.3:-54216962 | MS.gene45344:CDS |
| GGGGATGAGGATAAAGATGA+TGG | 0.507952 | 4.3:-54220294 | MS.gene45344:CDS |
| ACCTGACCCGAACCTTGTTA+CGG | 0.508969 | 4.3:-54220556 | MS.gene45344:CDS |
| AGTTGATGAAATCTTTGGAC+CGG | 0.513400 | 4.3:-54217651 | MS.gene45344:CDS |
| CAACAACCCATGTATGCACC+AGG | 0.516417 | 4.3:-54216918 | MS.gene45344:CDS |
| CCGCCGGCACCACGAAATGA+TGG | 0.518509 | 4.3:+54216723 | None:intergenic |
| TTAACAAATGGTGCTGCTGC+AGG | 0.524634 | 4.3:+54217257 | None:intergenic |
| TCTGAAAATGATGTTCCTGC+GGG | 0.528260 | 4.3:-54217596 | MS.gene45344:CDS |
| TTTGAAGGAAATGCATTTGG+AGG | 0.531200 | 4.3:+54217083 | None:intergenic |
| ACACCGGTGGCCGAAAAGCT+TGG | 0.531813 | 4.3:-54220399 | MS.gene45344:CDS |
| AACACATGATGTGGTGCTAC+AGG | 0.534154 | 4.3:+54217299 | None:intergenic |
| AGACCATCATTTCGTGGTGC+CGG | 0.534816 | 4.3:-54216726 | MS.gene45344:CDS |
| TTTCTTCTTTAACAGACTCT+CGG | 0.534882 | 4.3:-54217767 | MS.gene45344:intron |
| TAGGTGGTTGCTGAATTTGT+TGG | 0.535888 | 4.3:+54216859 | None:intergenic |
| CCATCATTTCGTGGTGCCGG+CGG | 0.541172 | 4.3:-54216723 | MS.gene45344:CDS |
| AATTGAGGTGAATGGGGATG+AGG | 0.542013 | 4.3:-54220307 | MS.gene45344:CDS |
| CCTTGTTACGGCGGAGACAC+CGG | 0.542140 | 4.3:-54220544 | MS.gene45344:CDS |
| AATAAGGATCTTTACAGGAA+AGG | 0.542882 | 4.3:-54217512 | MS.gene45344:CDS |
| GATGATGAAGATGTTGTAGT+AGG | 0.545558 | 4.3:-54220081 | MS.gene45344:CDS |
| TTTGGAGGCAGGGTAGGCTG+TGG | 0.545648 | 4.3:+54217098 | None:intergenic |
| CATCATTTCGTGGTGCCGGC+GGG | 0.548812 | 4.3:-54216722 | MS.gene45344:CDS |
| TGCTGCAGGTGCGTTAGGGA+CGG | 0.549837 | 4.3:+54217271 | None:intergenic |
| TTAATGAGGGTTCTGTTCTG+TGG | 0.552326 | 4.3:-54217703 | MS.gene45344:CDS |
| ATGATGCTGAAGATGAAGAA+GGG | 0.552349 | 4.3:-54220161 | MS.gene45344:CDS |
| GATGATGCTGAAGATGAAGA+AGG | 0.552682 | 4.3:-54220162 | MS.gene45344:CDS |
| GAAGCATGAACCTCTTAATG+AGG | 0.553949 | 4.3:-54217717 | MS.gene45344:CDS |
| AGGGTAGGCTGTGGCTGCTG+TGG | 0.557594 | 4.3:+54217107 | None:intergenic |
| AATGCATTTGGAGGCAGGGT+AGG | 0.561729 | 4.3:+54217092 | None:intergenic |
| GGTGCTAAACACACATCCAC+TGG | 0.561774 | 4.3:+54219279 | None:intergenic |
| CGAGGGAGACCATCATTTCG+TGG | 0.561884 | 4.3:-54216732 | MS.gene45344:CDS |
| CGCTGCTGCAATTCAGTGGG+TGG | 0.563508 | 4.3:+54216810 | None:intergenic |
| TGTATCTCACGACATAATAC+GGG | 0.571321 | 4.3:+54217621 | None:intergenic |
| TGGGAAATGAGTTCCATGAC+TGG | 0.573239 | 4.3:+54216977 | None:intergenic |
| CAGCAAATGAATCCCAGTCA+TGG | 0.580140 | 4.3:-54216990 | MS.gene45344:CDS |
| TTCTGAAAATGATGTTCCTG+CGG | 0.582447 | 4.3:-54217597 | MS.gene45344:CDS |
| AGGAAATGCATTTGGAGGCA+GGG | 0.582612 | 4.3:+54217088 | None:intergenic |
| GGGTGACCCTCCTTCAATTG+AGG | 0.583310 | 4.3:-54220322 | MS.gene45344:CDS |
| ACTGAAAGCCGCAAACCACT+AGG | 0.586696 | 4.3:-54217677 | MS.gene45344:CDS |
| CCTGGTTCATCAGGTAGTCG+AGG | 0.589472 | 4.3:-54216750 | MS.gene45344:CDS |
| ATCTTTCAAGCGCAGCAACA+GGG | 0.590414 | 4.3:-54216837 | MS.gene45344:CDS |
| GGGAAATGAGTTCCATGACT+GGG | 0.590419 | 4.3:+54216978 | None:intergenic |
| TCCTTCAATTGAGGTGAATG+GGG | 0.594580 | 4.3:-54220313 | MS.gene45344:CDS |
| TTTGCCTCCAGTTCCTCCAG+TGG | 0.595735 | 4.3:-54219295 | MS.gene45344:CDS |
| AGGACGCTGCTGCAATTCAG+TGG | 0.597169 | 4.3:+54216806 | None:intergenic |
| GAACCAGGATGAAATTGAGA+GGG | 0.598532 | 4.3:+54216765 | None:intergenic |
| GGGTTGCCAGAAATAGGACT+AGG | 0.599568 | 4.3:+54216786 | None:intergenic |
| CCTCGACTACCTGATGAACC+AGG | 0.599976 | 4.3:+54216750 | None:intergenic |
| GTTAGTTGGAGTGCGGCTGA+TGG | 0.600500 | 4.3:-54220114 | MS.gene45344:CDS |
| CCATTCACCTCAATTGAAGG+AGG | 0.603996 | 4.3:+54220315 | None:intergenic |
| GCAGGTGCGTTAGGGACGGT+AGG | 0.605527 | 4.3:+54217275 | None:intergenic |
| GATAAAGATGATGGAAGTGA+AGG | 0.608280 | 4.3:-54220285 | MS.gene45344:CDS |
| TCTCGGAGCTCAAGTCATTG+TGG | 0.608772 | 4.3:-54217750 | MS.gene45344:CDS |
| TGATGCTGAAGATGAAGAAG+GGG | 0.614960 | 4.3:-54220160 | MS.gene45344:CDS |
| GGAGCTCAAGTCATTGTGGA+AGG | 0.615668 | 4.3:-54217746 | MS.gene45344:CDS |
| GGACGCTGCTGCAATTCAGT+GGG | 0.619165 | 4.3:+54216807 | None:intergenic |
| TAGGTGTCTCTGCCGCAACA+GGG | 0.619305 | 4.3:+54220490 | None:intergenic |
| CTGGTTCATCAGGTAGTCGA+GGG | 0.619589 | 4.3:-54216749 | MS.gene45344:CDS |
| ACGAACCCTGGTGCATACAT+GGG | 0.620882 | 4.3:+54216912 | None:intergenic |
| ATGTATGCACCAGGGTTCGT+GGG | 0.622661 | 4.3:-54216909 | MS.gene45344:CDS |
| CACCATAAAATGCTACCTGT+GGG | 0.623469 | 4.3:-54219255 | MS.gene45344:CDS |
| TGGTTGCTGAATTTGTTGGA+AGG | 0.625553 | 4.3:+54216863 | None:intergenic |
| AACCCAAAACAACAACGGGT+CGG | 0.625847 | 4.3:-54220580 | MS.gene45344:CDS |
| ATTTGTTGGAAGGATTGTTG+TGG | 0.628552 | 4.3:+54216873 | None:intergenic |
| TCAAGTCATTGTGGAAGGAG+TGG | 0.631477 | 4.3:-54217741 | MS.gene45344:CDS |
| ATTTCATCAACTAAACCTAG+TGG | 0.632993 | 4.3:+54217662 | None:intergenic |
| ACCGACATAACAACTCCCAC+AGG | 0.634585 | 4.3:+54219240 | None:intergenic |
| ATGGAAACCCAAAACAACAA+CGG | 0.634738 | 4.3:-54220585 | MS.gene45344:CDS |
| ACACCATAAAATGCTACCTG+TGG | 0.634996 | 4.3:-54219256 | MS.gene45344:CDS |
| CGTTAACGACAACCCTGTTG+CGG | 0.635619 | 4.3:-54220502 | MS.gene45344:CDS |
| AGGTCGCCATCCTCTCCCGC+CGG | 0.637410 | 4.3:+54216707 | None:intergenic |
| ACGGTAGGAAACACATGATG+TGG | 0.637817 | 4.3:+54217290 | None:intergenic |
| GGTGCTACAGGTGCATTAGG+AGG | 0.638012 | 4.3:+54217311 | None:intergenic |
| TGAACCAGGATGAAATTGAG+AGG | 0.638944 | 4.3:+54216764 | None:intergenic |
| CTATTGAGAAATCAGTGGAA+AGG | 0.639817 | 4.3:-54220356 | MS.gene45344:CDS |
| AAGCATGAACCTCTTAATGA+GGG | 0.641077 | 4.3:-54217716 | MS.gene45344:CDS |
| GTTCCTGCGGGGATCCAAGG+GGG | 0.649023 | 4.3:-54217584 | MS.gene45344:CDS |
| ACATCCACTGGAGGAACTGG+AGG | 0.650287 | 4.3:+54219291 | None:intergenic |
| CATTCACCTCAATTGAAGGA+GGG | 0.652620 | 4.3:+54220316 | None:intergenic |
| AATTCCTATTGAGAAATCAG+TGG | 0.660421 | 4.3:-54220361 | MS.gene45344:CDS |
| ACCTGTGGGAGTTGTTATGT+CGG | 0.664217 | 4.3:-54219241 | MS.gene45344:intron |
| TGCTGCGCTTGAAAGATAGG+TGG | 0.668240 | 4.3:+54216843 | None:intergenic |
| TTTCCCAACTATGATGCCTG+GGG | 0.674017 | 4.3:-54216961 | MS.gene45344:CDS |
| GCTAAACACACATCCACTGG+AGG | 0.675971 | 4.3:+54219282 | None:intergenic |
| GAAAAGCTTAGCAACAACAA+CGG | 0.677921 | 4.3:-54220456 | MS.gene45344:CDS |
| GATGATGGAAGTGAAGGTGA+AGG | 0.678310 | 4.3:-54220279 | MS.gene45344:CDS |
| ACTTTGCTGCAAATTCAATG+TGG | 0.680521 | 4.3:-54217148 | MS.gene45344:CDS |
| TGTTCCTGCGGGGATCCAAG+GGG | 0.689084 | 4.3:-54217585 | MS.gene45344:CDS |
| AACCAGGATGAAATTGAGAG+GGG | 0.690537 | 4.3:+54216766 | None:intergenic |
| CTGAAAATGATGTTCCTGCG+GGG | 0.698469 | 4.3:-54217595 | MS.gene45344:CDS |
| AGGTTGAAATGGTGAAACTG+TGG | 0.703613 | 4.3:+54217187 | None:intergenic |
| TGACCCGAACCTTGTTACGG+CGG | 0.720208 | 4.3:-54220553 | MS.gene45344:CDS |
| AACAACCCATGTATGCACCA+GGG | 0.734261 | 4.3:-54216917 | MS.gene45344:CDS |
| GAAGATGGTTAGTTGGAGTG+CGG | 0.757022 | 4.3:-54220121 | MS.gene45344:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGTATGTAAATATTACTTA+CGG | + | chr4.3:54217634-54217653 | None:intergenic | 15.0% |
| !! | TTAAAAAATTCTATACTTTC+TGG | + | chr4.3:54218310-54218329 | None:intergenic | 15.0% |
| !! | AATACATGAAATATATCAGA+AGG | - | chr4.3:54219464-54219483 | MS.gene45344:intron | 20.0% |
| !! | ACACTTGATTTAAAAAGATA+GGG | + | chr4.3:54219423-54219442 | None:intergenic | 20.0% |
| !! | ACTAATGATAATATGATGTT+TGG | + | chr4.3:54218373-54218392 | None:intergenic | 20.0% |
| !! | ATACATGAAATATATCAGAA+GGG | - | chr4.3:54219465-54219484 | MS.gene45344:intron | 20.0% |
| !! | GATAACATGTATATAATCTT+TGG | + | chr4.3:54217585-54217604 | None:intergenic | 20.0% |
| !! | GGAAAAATTAATTAATTGTG+TGG | - | chr4.3:54217439-54217458 | MS.gene45344:CDS | 20.0% |
| !! | TAGTTTCCATTATTAACAAA+TGG | + | chr4.3:54220041-54220060 | None:intergenic | 20.0% |
| !! | TATATATATACTTGACAACA+TGG | - | chr4.3:54217674-54217693 | MS.gene45344:CDS | 20.0% |
| !!! | AAATAAAGGTATTTGAGTAA+CGG | + | chr4.3:54218933-54218952 | None:intergenic | 20.0% |
| !!! | AACTTTGAAAATATCTTGAA+TGG | - | chr4.3:54217949-54217968 | MS.gene45344:intron | 20.0% |
| !!! | ATTATCTGGTTTTATTTAGA+AGG | - | chr4.3:54217418-54217437 | MS.gene45344:CDS | 20.0% |
| !!! | ATTATGTTCAAGCTTTTTTA+CGG | + | chr4.3:54218572-54218591 | None:intergenic | 20.0% |
| !!! | CTTCATTGATAATTAAAGAT+GGG | - | chr4.3:54217487-54217506 | MS.gene45344:CDS | 20.0% |
| !!! | TATTTGATTTTTCATGTAAC+TGG | + | chr4.3:54218280-54218299 | None:intergenic | 20.0% |
| !!! | TTCATTGATAATTAAAGATG+GGG | - | chr4.3:54217488-54217507 | MS.gene45344:CDS | 20.0% |
| !!! | TTTATTTTCATTCATAGAGT+AGG | - | chr4.3:54217271-54217290 | MS.gene45344:CDS | 20.0% |
| ! | AAATAACAGTGTAGAACTTT+AGG | + | chr4.3:54218884-54218903 | None:intergenic | 25.0% |
| ! | AAATCCCTAAAAATAGTAGT+TGG | - | chr4.3:54219029-54219048 | MS.gene45344:intron | 25.0% |
| ! | AATAACAGTGTAGAACTTTA+GGG | + | chr4.3:54218883-54218902 | None:intergenic | 25.0% |
| ! | AATTCCTAGATCTTCAAAAT+TGG | + | chr4.3:54217776-54217795 | None:intergenic | 25.0% |
| ! | CACAAAAAACTTGAACATAA+GGG | + | chr4.3:54218983-54219002 | None:intergenic | 25.0% |
| ! | GAATACTTGAATTCCATTTA+GGG | + | chr4.3:54218796-54218815 | None:intergenic | 25.0% |
| ! | GACACTTGATTTAAAAAGAT+AGG | + | chr4.3:54219424-54219443 | None:intergenic | 25.0% |
| ! | GGTTGTTGTGAAAATATATT+GGG | + | chr4.3:54220353-54220372 | None:intergenic | 25.0% |
| ! | GTCAAGTATATAAATGTTTC+TGG | + | chr4.3:54217607-54217626 | None:intergenic | 25.0% |
| ! | TACATGAAATATATCAGAAG+GGG | - | chr4.3:54219466-54219485 | MS.gene45344:intron | 25.0% |
| ! | TAGAATAGAAGATGAACAAA+AGG | - | chr4.3:54218100-54218119 | MS.gene45344:intron | 25.0% |
| ! | TCAATAATAAGGATCTTTAC+AGG | - | chr4.3:54219766-54219785 | MS.gene45344:intron | 25.0% |
| ! | TGAATACTTGAATTCCATTT+AGG | + | chr4.3:54218797-54218816 | None:intergenic | 25.0% |
| !! | ATCTCATTCTTTGACTTAAT+TGG | + | chr4.3:54217229-54217248 | None:intergenic | 25.0% |
| !! | GCTTCATTGATAATTAAAGA+TGG | - | chr4.3:54217486-54217505 | MS.gene45344:CDS | 25.0% |
| !! | TGGTTGATTCTAAGAATAAT+TGG | + | chr4.3:54219494-54219513 | None:intergenic | 25.0% |
| !! | TTTTCTTCATAACATGTTTC+TGG | + | chr4.3:54217561-54217580 | None:intergenic | 25.0% |
| !!! | ACAACCAACTACTATTTTTA+GGG | + | chr4.3:54219036-54219055 | None:intergenic | 25.0% |
| !!! | TTATTGTTTTTTTTCTTGCC+AGG | + | chr4.3:54219921-54219940 | None:intergenic | 25.0% |
| !!! | TTTTTTGTTGTGACCAATTT+GGG | - | chr4.3:54218456-54218475 | MS.gene45344:intron | 25.0% |
| !!! | TTTTTTTGTTGTGACCAATT+TGG | - | chr4.3:54218455-54218474 | MS.gene45344:intron | 25.0% |
| AAGCATATGAAACTGGATAT+AGG | + | chr4.3:54219128-54219147 | None:intergenic | 30.0% | |
| AATAAGGATCTTTACAGGAA+AGG | - | chr4.3:54219771-54219790 | MS.gene45344:intron | 30.0% | |
| AATTCCTATTGAGAAATCAG+TGG | - | chr4.3:54216922-54216941 | MS.gene45344:CDS | 30.0% | |
| ACAAAAGGAAATCATTGTGA+AGG | - | chr4.3:54218115-54218134 | MS.gene45344:intron | 30.0% | |
| AGTCTGTTAAAGAAGAAAGT+TGG | + | chr4.3:54219514-54219533 | None:intergenic | 30.0% | |
| ATGCTTCATTGTCAATTATC+TGG | - | chr4.3:54217404-54217423 | MS.gene45344:CDS | 30.0% | |
| ATTAATTAATTGTGTGGTGC+TGG | - | chr4.3:54217445-54217464 | MS.gene45344:CDS | 30.0% | |
| ATTGAATTTGCAGCAAAGTT+AGG | + | chr4.3:54220134-54220153 | None:intergenic | 30.0% | |
| ATTTCATCAACTAAACCTAG+TGG | + | chr4.3:54219624-54219643 | None:intergenic | 30.0% | |
| CAAAAGGAAATCATTGTGAA+GGG | - | chr4.3:54218116-54218135 | MS.gene45344:intron | 30.0% | |
| CATGGTTACAAACATGTATA+TGG | - | chr4.3:54217692-54217711 | MS.gene45344:CDS | 30.0% | |
| CCACAAAAAACTTGAACATA+AGG | + | chr4.3:54218984-54219003 | None:intergenic | 30.0% | |
| CTACTCATCTAATAACAGAT+GGG | + | chr4.3:54218083-54218102 | None:intergenic | 30.0% | |
| GACAAGGTTCAATCAAATAA+AGG | + | chr4.3:54218947-54218966 | None:intergenic | 30.0% | |
| GATATAGGAATGAGAAAGTT+TGG | + | chr4.3:54219113-54219132 | None:intergenic | 30.0% | |
| GCAACTTAATCTTCTAGATT+AGG | - | chr4.3:54218542-54218561 | MS.gene45344:intron | 30.0% | |
| GCATCTAAATCTTCAAGATT+GGG | + | chr4.3:54219009-54219028 | None:intergenic | 30.0% | |
| GGGTTGTTGTGAAAATATAT+TGG | + | chr4.3:54220354-54220373 | None:intergenic | 30.0% | |
| GTATACGCAATTAAGCAATA+GGG | + | chr4.3:54218841-54218860 | None:intergenic | 30.0% | |
| TAAGTCAAAGAATGAGATTC+AGG | - | chr4.3:54217231-54217250 | MS.gene45344:CDS | 30.0% | |
| TAATATGACATGGCATTTGA+AGG | + | chr4.3:54220218-54220237 | None:intergenic | 30.0% | |
| TAATATGCTACATCTCACAA+TGG | - | chr4.3:54219179-54219198 | MS.gene45344:intron | 30.0% | |
| TCTACTCATCTAATAACAGA+TGG | + | chr4.3:54218084-54218103 | None:intergenic | 30.0% | |
| TGAACATGTGCTCAATAATA+AGG | - | chr4.3:54219755-54219774 | MS.gene45344:intron | 30.0% | |
| TGCATCTAAATCTTCAAGAT+TGG | + | chr4.3:54219010-54219029 | None:intergenic | 30.0% | |
| TGTATACGCAATTAAGCAAT+AGG | + | chr4.3:54218842-54218861 | None:intergenic | 30.0% | |
| TGTTACAAAGCATATGAAAC+TGG | + | chr4.3:54219135-54219154 | None:intergenic | 30.0% | |
| TTCAAAGCAACATGTCAAAT+AGG | + | chr4.3:54217801-54217820 | None:intergenic | 30.0% | |
| TTGTATCTCACGACATAATA+CGG | + | chr4.3:54219666-54219685 | None:intergenic | 30.0% | |
| TTTCTTCTTTAACAGACTCT+CGG | - | chr4.3:54219516-54219535 | MS.gene45344:intron | 30.0% | |
| ! | ATGCTTCATTGATGATAATC+TGG | - | chr4.3:54217526-54217545 | MS.gene45344:CDS | 30.0% |
| ! | GTTTTGTGGATAATATGACA+TGG | + | chr4.3:54220228-54220247 | None:intergenic | 30.0% |
| ! | TGCTTCATTGATGATAATCT+GGG | - | chr4.3:54217527-54217546 | MS.gene45344:CDS | 30.0% |
| ! | TTTTCTTTCTCCAGTTGATT+GGG | - | chr4.3:54219393-54219412 | MS.gene45344:intron | 30.0% |
| ! | TTTTTCTTTCTCCAGTTGAT+TGG | - | chr4.3:54219392-54219411 | MS.gene45344:intron | 30.0% |
| !! | CACAACCAACTACTATTTTT+AGG | + | chr4.3:54219037-54219056 | None:intergenic | 30.0% |
| !! | GGTTTAGTTGATGAAATCTT+TGG | - | chr4.3:54219627-54219646 | MS.gene45344:intron | 30.0% |
| !! | TATTTGACATGTTGCTTTGA+AGG | - | chr4.3:54217800-54217819 | MS.gene45344:intron | 30.0% |
| !! | TGATTGCATAGAAAAGTACT+TGG | - | chr4.3:54217308-54217327 | MS.gene45344:CDS | 30.0% |
| !!! | AGATTTTGAGGTATTAGTTC+CGG | + | chr4.3:54216761-54216780 | None:intergenic | 30.0% |
| !!! | CCTTATGTTCAAGTTTTTTG+TGG | - | chr4.3:54218981-54219000 | MS.gene45344:intron | 30.0% |
| AAAAGCTTAGCAACAACAAC+GGG | - | chr4.3:54216828-54216847 | MS.gene45344:CDS | 35.0% | |
| AAAGTGTGTTACGATGCATA+TGG | - | chr4.3:54218401-54218420 | MS.gene45344:intron | 35.0% | |
| AAGCATGAACCTCTTAATGA+GGG | - | chr4.3:54219567-54219586 | MS.gene45344:intron | 35.0% | |
| AAGTTAGGACCTGCATTTAA+AGG | + | chr4.3:54220119-54220138 | None:intergenic | 35.0% | |
| AATGAGAAAGTTTGGTTGTG+AGG | + | chr4.3:54219105-54219124 | None:intergenic | 35.0% | |
| ACTTTGCTGCAAATTCAATG+TGG | - | chr4.3:54220135-54220154 | MS.gene45344:CDS | 35.0% | |
| ATGATGAGAAGATGGTTAGT+TGG | - | chr4.3:54217155-54217174 | MS.gene45344:CDS | 35.0% | |
| ATGATGCTGAAGATGAAGAA+GGG | - | chr4.3:54217122-54217141 | MS.gene45344:CDS | 35.0% | |
| ATGGAAACCCAAAACAACAA+CGG | - | chr4.3:54216698-54216717 | MS.gene45344:CDS | 35.0% | |
| ATTGCAGCAAATGAACTCAA+AGG | - | chr4.3:54218197-54218216 | MS.gene45344:intron | 35.0% | |
| CATAATCACGCAACTTCTAA+AGG | - | chr4.3:54218586-54218605 | MS.gene45344:intron | 35.0% | |
| CCATTTCAACCTTTAAATGC+AGG | - | chr4.3:54220107-54220126 | MS.gene45344:CDS | 35.0% | |
| CCTGCATTTAAAGGTTGAAA+TGG | + | chr4.3:54220110-54220129 | None:intergenic | 35.0% | |
| CGCAAAAAATGACAAAGAGA+GGG | - | chr4.3:54219880-54219899 | MS.gene45344:intron | 35.0% | |
| CTACAACTGTAGAAGCAATT+AGG | - | chr4.3:54218633-54218652 | MS.gene45344:intron | 35.0% | |
| CTATTGAGAAATCAGTGGAA+AGG | - | chr4.3:54216927-54216946 | MS.gene45344:CDS | 35.0% | |
| CTCACAATGGTCTGTTAAAA+AGG | - | chr4.3:54219192-54219211 | MS.gene45344:intron | 35.0% | |
| GAAAAGCTTAGCAACAACAA+CGG | - | chr4.3:54216827-54216846 | MS.gene45344:CDS | 35.0% | |
| GATGATGAAGATGTTGTAGT+AGG | - | chr4.3:54217202-54217221 | MS.gene45344:CDS | 35.0% | |
| GCAAAAAATGACAAAGAGAG+GGG | - | chr4.3:54219881-54219900 | MS.gene45344:intron | 35.0% | |
| GCATTTGAAGGAAATGCATT+TGG | + | chr4.3:54220206-54220225 | None:intergenic | 35.0% | |
| GGTTACAAACATGTATATGG+TGG | - | chr4.3:54217695-54217714 | MS.gene45344:CDS | 35.0% | |
| TGGTTGTGACATTCAATCAT+CGG | + | chr4.3:54218504-54218523 | None:intergenic | 35.0% | |
| TGTATCTCACGACATAATAC+GGG | + | chr4.3:54219665-54219684 | None:intergenic | 35.0% | |
| TTTGAAGGAAATGCATTTGG+AGG | + | chr4.3:54220203-54220222 | None:intergenic | 35.0% | |
| ! | ACATAATACGGGTTTTTGAC+CGG | + | chr4.3:54219654-54219673 | None:intergenic | 35.0% |
| ! | ACTTCTAAAGGTGTAACTTG+AGG | - | chr4.3:54218598-54218617 | MS.gene45344:intron | 35.0% |
| ! | ATTTGTTGGAAGGATTGTTG+TGG | + | chr4.3:54220413-54220432 | None:intergenic | 35.0% |
| ! | CTTCTAAAGGTGTAACTTGA+GGG | - | chr4.3:54218599-54218618 | MS.gene45344:intron | 35.0% |
| ! | GATAAGTGATGATGAGAAGA+TGG | - | chr4.3:54217147-54217166 | MS.gene45344:CDS | 35.0% |
| ! | GCAGCACCATTTGTTAATAA+TGG | - | chr4.3:54220032-54220051 | MS.gene45344:intron | 35.0% |
| ! | GGAAACTATTCTCCTTTTTC+AGG | - | chr4.3:54220053-54220072 | MS.gene45344:CDS | 35.0% |
| ! | GTTTTCAGATGATGAGAAAG+AGG | - | chr4.3:54219842-54219861 | MS.gene45344:intron | 35.0% |
| ! | TGAGAAAGTTGTGTGTTTTG+TGG | + | chr4.3:54220242-54220261 | None:intergenic | 35.0% |
| ! | TTCTGAAAATGATGTTCCTG+CGG | - | chr4.3:54219686-54219705 | MS.gene45344:intron | 35.0% |
| ! | TTGTCGTTAACGAGATTTTG+AGG | + | chr4.3:54216773-54216792 | None:intergenic | 35.0% |
| !! | AGTTGATGAAATCTTTGGAC+CGG | - | chr4.3:54219632-54219651 | MS.gene45344:intron | 35.0% |
| !! | CAAACATGTATATGGTGGAT+TGG | - | chr4.3:54217700-54217719 | MS.gene45344:CDS | 35.0% |
| !! | CTTTCCACTGATTTCTCAAT+AGG | + | chr4.3:54216929-54216948 | None:intergenic | 35.0% |
| !! | GAGTAACGGATAATCAACAT+TGG | + | chr4.3:54218919-54218938 | None:intergenic | 35.0% |
| !! | GATAAAGATGATGGAAGTGA+AGG | - | chr4.3:54216998-54217017 | MS.gene45344:CDS | 35.0% |
| !! | GGATTCATTTGCTGTTGAAA+TGG | + | chr4.3:54220287-54220306 | None:intergenic | 35.0% |
| !! | TGAGCCAATTTTGAAGATCT+AGG | - | chr4.3:54217769-54217788 | MS.gene45344:intron | 35.0% |
| !! | TTGCATAGAAAAGTACTTGG+TGG | - | chr4.3:54217311-54217330 | MS.gene45344:CDS | 35.0% |
| !! | TTGTTGTTGCTAAGCTTTTC+AGG | + | chr4.3:54216827-54216846 | None:intergenic | 35.0% |
| !!! | AAGGGCAAGATTTTGAAACT+TGG | - | chr4.3:54218134-54218153 | MS.gene45344:intron | 35.0% |
| !!! | AGGGCAAGATTTTGAAACTT+GGG | - | chr4.3:54218135-54218154 | MS.gene45344:intron | 35.0% |
| !!! | TATTCTCCTTTTTCAGGCAT+TGG | - | chr4.3:54220059-54220078 | MS.gene45344:CDS | 35.0% |
| AACCAGGATGAAATTGAGAG+GGG | + | chr4.3:54220520-54220539 | None:intergenic | 40.0% | |
| AACTCAAAGGAAGGTTCATG+TGG | - | chr4.3:54218210-54218229 | MS.gene45344:intron | 40.0% | |
| AAGTTTGGTTGTGAGGATGT+AGG | + | chr4.3:54219098-54219117 | None:intergenic | 40.0% | |
| ACACCATAAAATGCTACCTG+TGG | - | chr4.3:54218027-54218046 | MS.gene45344:intron | 40.0% | |
| ACTCAAAGGAAGGTTCATGT+GGG | - | chr4.3:54218211-54218230 | MS.gene45344:intron | 40.0% | |
| AGAACAGAACCCTCATTAAG+AGG | + | chr4.3:54219579-54219598 | None:intergenic | 40.0% | |
| AGCACATGTTCAGCAAATTC+TGG | + | chr4.3:54219747-54219766 | None:intergenic | 40.0% | |
| AGGTTGAAATGGTGAAACTG+TGG | + | chr4.3:54220099-54220118 | None:intergenic | 40.0% | |
| AGTGGAAAGGATCACGTTAA+CGG | - | chr4.3:54216940-54216959 | MS.gene45344:CDS | 40.0% | |
| ATAGGGTTGAAGTGATCATG+CGG | + | chr4.3:54218824-54218843 | None:intergenic | 40.0% | |
| ATGAGAAAGAGGCTGAATAC+AGG | - | chr4.3:54219853-54219872 | MS.gene45344:intron | 40.0% | |
| ATTCAACTACCAGTCGAAGA+GGG | - | chr4.3:54219059-54219078 | MS.gene45344:intron | 40.0% | |
| ATTCAATCATCGGTGGAAGA+GGG | + | chr4.3:54218494-54218513 | None:intergenic | 40.0% | |
| ATTTCCCAACTATGATGCCT+GGG | - | chr4.3:54220321-54220340 | MS.gene45344:CDS | 40.0% | |
| CAAAAGACATTGTAGAGCAC+TGG | + | chr4.3:54219359-54219378 | None:intergenic | 40.0% | |
| CAACTAAACCTAGTGGTTTG+CGG | + | chr4.3:54219617-54219636 | None:intergenic | 40.0% | |
| CAATTTCATCCTGGTTCATC+AGG | - | chr4.3:54220524-54220543 | MS.gene45344:CDS | 40.0% | |
| CACCATAAAATGCTACCTGT+GGG | - | chr4.3:54218028-54218047 | MS.gene45344:intron | 40.0% | |
| CAGCAAATGAACTCAAAGGA+AGG | - | chr4.3:54218201-54218220 | MS.gene45344:intron | 40.0% | |
| CATTCACCTCAATTGAAGGA+GGG | + | chr4.3:54216970-54216989 | None:intergenic | 40.0% | |
| CCATTTAGGGAAACAGCAAA+AGG | + | chr4.3:54218783-54218802 | None:intergenic | 40.0% | |
| CTCCTTCAATTGAGGTGAAT+GGG | - | chr4.3:54216969-54216988 | MS.gene45344:CDS | 40.0% | |
| CTGCAATGTCTTGTGGAATT+TGG | - | chr4.3:54219327-54219346 | MS.gene45344:intron | 40.0% | |
| CTTTATGCAGCATAGCTAAG+AGG | + | chr4.3:54218702-54218721 | None:intergenic | 40.0% | |
| GAACCAGGATGAAATTGAGA+GGG | + | chr4.3:54220521-54220540 | None:intergenic | 40.0% | |
| GAAGCATGAACCTCTTAATG+AGG | - | chr4.3:54219566-54219585 | MS.gene45344:intron | 40.0% | |
| GATGATGCTGAAGATGAAGA+AGG | - | chr4.3:54217121-54217140 | MS.gene45344:CDS | 40.0% | |
| GCAAGATCAAGAAGAACAGT+TGG | + | chr4.3:54218524-54218543 | None:intergenic | 40.0% | |
| GCGCAAAAAATGACAAAGAG+AGG | - | chr4.3:54219879-54219898 | MS.gene45344:intron | 40.0% | |
| GGGGTAAATGATCAAAATCC+TGG | - | chr4.3:54219900-54219919 | MS.gene45344:intron | 40.0% | |
| GTGTTACGATGCATATGGAA+GGG | - | chr4.3:54218406-54218425 | MS.gene45344:intron | 40.0% | |
| GTTGTGACCAATTTGGGTAA+GGG | - | chr4.3:54218462-54218481 | MS.gene45344:intron | 40.0% | |
| TAGGTGGTTGCTGAATTTGT+TGG | + | chr4.3:54220427-54220446 | None:intergenic | 40.0% | |
| TCAGACCAAACTGCAGTTAA+GGG | + | chr4.3:54217734-54217753 | None:intergenic | 40.0% | |
| TCCTTCAATTGAGGTGAATG+GGG | - | chr4.3:54216970-54216989 | MS.gene45344:CDS | 40.0% | |
| TCTGAAAATGATGTTCCTGC+GGG | - | chr4.3:54219687-54219706 | MS.gene45344:intron | 40.0% | |
| TGAAATGGAATTCCTGGAAC+AGG | + | chr4.3:54220272-54220291 | None:intergenic | 40.0% | |
| TGAACCAGGATGAAATTGAG+AGG | + | chr4.3:54220522-54220541 | None:intergenic | 40.0% | |
| TGAGGATGTAGGTAAGGATT+TGG | + | chr4.3:54219087-54219106 | None:intergenic | 40.0% | |
| TGATGCTGAAGATGAAGAAG+GGG | - | chr4.3:54217123-54217142 | MS.gene45344:CDS | 40.0% | |
| TGCTGTTGAAATGGAATTCC+TGG | + | chr4.3:54220278-54220297 | None:intergenic | 40.0% | |
| TGGAAACCCAAAACAACAAC+GGG | - | chr4.3:54216699-54216718 | MS.gene45344:CDS | 40.0% | |
| TGTGTTACGATGCATATGGA+AGG | - | chr4.3:54218405-54218424 | MS.gene45344:intron | 40.0% | |
| TGTTGTGACCAATTTGGGTA+AGG | - | chr4.3:54218461-54218480 | MS.gene45344:intron | 40.0% | |
| TTAATGAGGGTTCTGTTCTG+TGG | - | chr4.3:54219580-54219599 | MS.gene45344:intron | 40.0% | |
| TTGTGACATTCAATCATCGG+TGG | + | chr4.3:54218501-54218520 | None:intergenic | 40.0% | |
| ! | ACAGGTAGCATTTTATGGTG+TGG | + | chr4.3:54218028-54218047 | None:intergenic | 40.0% |
| ! | CAGTGCTCTACAATGTCTTT+TGG | - | chr4.3:54219357-54219376 | MS.gene45344:intron | 40.0% |
| ! | GGGTGCAATTTCTAAAGACA+AGG | + | chr4.3:54218963-54218982 | None:intergenic | 40.0% |
| ! | TCATTTGCTGCAATGTCTTG+TGG | + | chr4.3:54218191-54218210 | None:intergenic | 40.0% |
| ! | TGGGTTAGATTGTGAAGCAT+GGG | - | chr4.3:54218230-54218249 | MS.gene45344:intron | 40.0% |
| ! | TGGGTTAGATTGTGAGATGT+GGG | + | chr4.3:54219280-54219299 | None:intergenic | 40.0% |
| !! | TGGTTGCTGAATTTGTTGGA+AGG | + | chr4.3:54220423-54220442 | None:intergenic | 40.0% |
| !! | TGTTGCTTTGAAGGTAGCTT+TGG | - | chr4.3:54217809-54217828 | MS.gene45344:intron | 40.0% |
| !!! | CCTTTTGCTGTTTCCCTAAA+TGG | - | chr4.3:54218780-54218799 | MS.gene45344:intron | 40.0% |
| !!! | TACTTGGTGGCTTTGAGTTT+TGG | - | chr4.3:54217324-54217343 | MS.gene45344:CDS | 40.0% |
| AACAACCCATGTATGCACCA+GGG | - | chr4.3:54220366-54220385 | MS.gene45344:CDS | 45.0% | |
| AACCCAAAACAACAACGGGT+CGG | - | chr4.3:54216703-54216722 | MS.gene45344:CDS | 45.0% | |
| AACCCCTCTCAATTTCATCC+TGG | - | chr4.3:54220515-54220534 | MS.gene45344:CDS | 45.0% | |
| AAGGAAATGCATTTGGAGGC+AGG | + | chr4.3:54220199-54220218 | None:intergenic | 45.0% | |
| AATATATTGGGCTGTACCCC+AGG | + | chr4.3:54220341-54220360 | None:intergenic | 45.0% | |
| AATTGAGGTGAATGGGGATG+AGG | - | chr4.3:54216976-54216995 | MS.gene45344:CDS | 45.0% | |
| ACCTGTGGGAGTTGTTATGT+CGG | - | chr4.3:54218042-54218061 | MS.gene45344:intron | 45.0% | |
| ACGGTAGGAAACACATGATG+TGG | + | chr4.3:54219996-54220015 | None:intergenic | 45.0% | |
| AGGAAAGGCTATGATGCATC+TGG | - | chr4.3:54219786-54219805 | MS.gene45344:intron | 45.0% | |
| AGGAAATGCATTTGGAGGCA+GGG | + | chr4.3:54220198-54220217 | None:intergenic | 45.0% | |
| AGGGATCTGGAAGGGAATAT+AGG | - | chr4.3:54218425-54218444 | MS.gene45344:intron | 45.0% | |
| ATCTTTCAAGCGCAGCAACA+GGG | - | chr4.3:54220446-54220465 | MS.gene45344:CDS | 45.0% | |
| ATTGCAGCGAATGAACCCAA+AGG | + | chr4.3:54219314-54219333 | None:intergenic | 45.0% | |
| CAGCAAATGAATCCCAGTCA+TGG | - | chr4.3:54220293-54220312 | MS.gene45344:CDS | 45.0% | |
| CATATGGAAGGGATCTGGAA+GGG | - | chr4.3:54218417-54218436 | MS.gene45344:intron | 45.0% | |
| CATTCAACTACCAGTCGAAG+AGG | - | chr4.3:54219058-54219077 | MS.gene45344:intron | 45.0% | |
| CATTCAATCATCGGTGGAAG+AGG | + | chr4.3:54218495-54218514 | None:intergenic | 45.0% | |
| CATTTCCCAACTATGATGCC+TGG | - | chr4.3:54220320-54220339 | MS.gene45344:CDS | 45.0% | |
| CCATTCACCTCAATTGAAGG+AGG | + | chr4.3:54216971-54216990 | None:intergenic | 45.0% | |
| CCTCCTTCAATTGAGGTGAA+TGG | - | chr4.3:54216968-54216987 | MS.gene45344:CDS | 45.0% | |
| CCTTGTCCAATGCCTGAAAA+AGG | + | chr4.3:54220068-54220087 | None:intergenic | 45.0% | |
| CGTATCCCTTAACTGCAGTT+TGG | - | chr4.3:54217726-54217745 | MS.gene45344:CDS | 45.0% | |
| CTGAAAATGATGTTCCTGCG+GGG | - | chr4.3:54219688-54219707 | MS.gene45344:intron | 45.0% | |
| GGAGGTAACACATGCTCTTT+CGG | + | chr4.3:54219957-54219976 | None:intergenic | 45.0% | |
| GGCTAAACCCTTACCCAAAT+TGG | + | chr4.3:54218472-54218491 | None:intergenic | 45.0% | |
| GGGAAATGAGTTCCATGACT+GGG | + | chr4.3:54220308-54220327 | None:intergenic | 45.0% | |
| GGGGATGAGGATAAAGATGA+TGG | - | chr4.3:54216989-54217008 | MS.gene45344:CDS | 45.0% | |
| GTCAGACCAAACTGCAGTTA+AGG | + | chr4.3:54217735-54217754 | None:intergenic | 45.0% | |
| GTGGAAAGGATCACGTTAAC+GGG | - | chr4.3:54216941-54216960 | MS.gene45344:CDS | 45.0% | |
| TATCTTTCAAGCGCAGCAAC+AGG | - | chr4.3:54220445-54220464 | MS.gene45344:CDS | 45.0% | |
| TCAAGTCATTGTGGAAGGAG+TGG | - | chr4.3:54219542-54219561 | MS.gene45344:intron | 45.0% | |
| TCATTCGCTGCAATGTCTTG+TGG | - | chr4.3:54219320-54219339 | MS.gene45344:intron | 45.0% | |
| TCCCCATTCACCTCAATTGA+AGG | + | chr4.3:54216974-54216993 | None:intergenic | 45.0% | |
| TCTCATCAGTTTCCTGTTCC+AGG | - | chr4.3:54220257-54220276 | MS.gene45344:CDS | 45.0% | |
| TGGGAAATGAGTTCCATGAC+TGG | + | chr4.3:54220309-54220328 | None:intergenic | 45.0% | |
| TGGTTGTGAGGATGTAGGTA+AGG | + | chr4.3:54219093-54219112 | None:intergenic | 45.0% | |
| TGTAACTTGAGGGTGACAAG+AGG | - | chr4.3:54218609-54218628 | MS.gene45344:intron | 45.0% | |
| TGTTGCTGCGCTTGAAAGAT+AGG | + | chr4.3:54220446-54220465 | None:intergenic | 45.0% | |
| TTCAACTACCAGTCGAAGAG+GGG | - | chr4.3:54219060-54219079 | MS.gene45344:intron | 45.0% | |
| TTCAATCATCGGTGGAAGAG+GGG | + | chr4.3:54218493-54218512 | None:intergenic | 45.0% | |
| TTTCCCAACTATGATGCCTG+GGG | - | chr4.3:54220322-54220341 | MS.gene45344:CDS | 45.0% | |
| ! | ACTTGACCCGAACCCTTTTT+CGG | - | chr4.3:54216856-54216875 | MS.gene45344:CDS | 45.0% |
| ! | ATAGGGTGTTCCCAATCAAC+TGG | + | chr4.3:54219406-54219425 | None:intergenic | 45.0% |
| ! | CTCCCACAGGTAGCATTTTA+TGG | + | chr4.3:54218033-54218052 | None:intergenic | 45.0% |
| ! | GAAGATGGTTAGTTGGAGTG+CGG | - | chr4.3:54217162-54217181 | MS.gene45344:CDS | 45.0% |
| ! | TGCAGTTTGGTCTGACTTGA+GGG | - | chr4.3:54217739-54217758 | MS.gene45344:CDS | 45.0% |
| !! | AACACATGATGTGGTGCTAC+AGG | + | chr4.3:54219987-54220006 | None:intergenic | 45.0% |
| !! | ACCCGAAGTACCAAGCTTTT+CGG | + | chr4.3:54216897-54216916 | None:intergenic | 45.0% |
| !! | GAAGTGTTGAAGTGACCATG+CGG | - | chr4.3:54218658-54218677 | MS.gene45344:intron | 45.0% |
| !! | GATGATGGAAGTGAAGGTGA+AGG | - | chr4.3:54217004-54217023 | MS.gene45344:CDS | 45.0% |
| !! | GTGGGTTAGATTGTGAAGCA+TGG | - | chr4.3:54218229-54218248 | MS.gene45344:intron | 45.0% |
| !! | GTGGGTTAGATTGTGAGATG+TGG | + | chr4.3:54219281-54219300 | None:intergenic | 45.0% |
| !! | TTAACAAATGGTGCTGCTGC+AGG | + | chr4.3:54220029-54220048 | None:intergenic | 45.0% |
| !! | TTGCTAAGCTTTTCAGGCTG+TGG | + | chr4.3:54216821-54216840 | None:intergenic | 45.0% |
| !!! | CCTTTTTCAGGCATTGGACA+AGG | - | chr4.3:54220065-54220084 | MS.gene45344:CDS | 45.0% |
| !!! | TTCCGACCCGTTGTTGTTTT+GGG | + | chr4.3:54216708-54216727 | None:intergenic | 45.0% |
| !!! | TTTTCAGGCATTGGACAAGG+TGG | - | chr4.3:54220068-54220087 | MS.gene45344:CDS | 45.0% |
| AATGCATTTGGAGGCAGGGT+AGG | + | chr4.3:54220194-54220213 | None:intergenic | 50.0% | |
| ACCCAAAGGTAACGTTCGTG+TGG | + | chr4.3:54219300-54219319 | None:intergenic | 50.0% | |
| ACCCACACGAACGTTACCTT+TGG | - | chr4.3:54219295-54219314 | MS.gene45344:CDS | 50.0% | |
| ACCGACATAACAACTCCCAC+AGG | + | chr4.3:54218046-54218065 | None:intergenic | 50.0% | |
| ACCTGACCCGAACCTTGTTA+CGG | - | chr4.3:54216727-54216746 | MS.gene45344:CDS | 50.0% | |
| ACGAACCCTGGTGCATACAT+GGG | + | chr4.3:54220374-54220393 | None:intergenic | 50.0% | |
| ACTGAAAGCCGCAAACCACT+AGG | - | chr4.3:54219606-54219625 | MS.gene45344:intron | 50.0% | |
| AGACCAAAGTTGTTCCCCCT+TGG | + | chr4.3:54219716-54219735 | None:intergenic | 50.0% | |
| AGACCATCATTTCGTGGTGC+CGG | - | chr4.3:54220557-54220576 | MS.gene45344:CDS | 50.0% | |
| ATGTATGCACCAGGGTTCGT+GGG | - | chr4.3:54220374-54220393 | MS.gene45344:CDS | 50.0% | |
| CAACAACCCATGTATGCACC+AGG | - | chr4.3:54220365-54220384 | MS.gene45344:CDS | 50.0% | |
| CAGCGTCCTAGTCCTATTTC+TGG | - | chr4.3:54220491-54220510 | MS.gene45344:CDS | 50.0% | |
| CCCAAAGGTAACGTTCGTGT+GGG | + | chr4.3:54219299-54219318 | None:intergenic | 50.0% | |
| CCCACACGAACGTTACCTTT+GGG | - | chr4.3:54219296-54219315 | MS.gene45344:CDS | 50.0% | |
| CGATGCATATGGAAGGGATC+TGG | - | chr4.3:54218412-54218431 | MS.gene45344:intron | 50.0% | |
| CGTTAACGACAACCCTGTTG+CGG | - | chr4.3:54216781-54216800 | MS.gene45344:CDS | 50.0% | |
| CTGGTTCATCAGGTAGTCGA+GGG | - | chr4.3:54220534-54220553 | MS.gene45344:CDS | 50.0% | |
| GATCCAAGGGGGAACAACTT+TGG | - | chr4.3:54219710-54219729 | MS.gene45344:intron | 50.0% | |
| GCATATGGAAGGGATCTGGA+AGG | - | chr4.3:54218416-54218435 | MS.gene45344:intron | 50.0% | |
| GCCGAAAAGCTTGGTACTTC+GGG | - | chr4.3:54216893-54216912 | MS.gene45344:CDS | 50.0% | |
| GCTAAACACACATCCACTGG+AGG | + | chr4.3:54218004-54218023 | None:intergenic | 50.0% | |
| GGAAGGATTGTTGTGGCATC+TGG | + | chr4.3:54220406-54220425 | None:intergenic | 50.0% | |
| GGAGCTCAAGTCATTGTGGA+AGG | - | chr4.3:54219537-54219556 | MS.gene45344:intron | 50.0% | |
| GGCCGAAAAGCTTGGTACTT+CGG | - | chr4.3:54216892-54216911 | MS.gene45344:CDS | 50.0% | |
| GGGTTGCCAGAAATAGGACT+AGG | + | chr4.3:54220500-54220519 | None:intergenic | 50.0% | |
| GGTGCTAAACACACATCCAC+TGG | + | chr4.3:54218007-54218026 | None:intergenic | 50.0% | |
| GTACCCCAGGCATCATAGTT+GGG | + | chr4.3:54220328-54220347 | None:intergenic | 50.0% | |
| TCAACTACCAGTCGAAGAGG+GGG | - | chr4.3:54219061-54219080 | MS.gene45344:intron | 50.0% | |
| TCAAGAACTCAACCTCCGCA+TGG | + | chr4.3:54218676-54218695 | None:intergenic | 50.0% | |
| TCTCGGAGCTCAAGTCATTG+TGG | - | chr4.3:54219533-54219552 | MS.gene45344:intron | 50.0% | |
| TGAGAGGGGTTGCCAGAAAT+AGG | + | chr4.3:54220506-54220525 | None:intergenic | 50.0% | |
| TGCTGCGCTTGAAAGATAGG+TGG | + | chr4.3:54220443-54220462 | None:intergenic | 50.0% | |
| TGTACCCCAGGCATCATAGT+TGG | + | chr4.3:54220329-54220348 | None:intergenic | 50.0% | |
| ! | CTGCAGTTTGGTCTGACTTG+AGG | - | chr4.3:54217738-54217757 | MS.gene45344:CDS | 50.0% |
| !! | AGACATTGTAGAGCACTGGC+AGG | + | chr4.3:54219355-54219374 | None:intergenic | 50.0% |
| !! | AGCTTTTCAGGCTGTGGCTT+AGG | + | chr4.3:54216815-54216834 | None:intergenic | 50.0% |
| !! | GCTTTGAAGGTAGCTTTGGC+TGG | - | chr4.3:54217813-54217832 | MS.gene45344:intron | 50.0% |
| !! | TGTGGTGCTACAGGTGCATT+AGG | + | chr4.3:54219978-54219997 | None:intergenic | 50.0% |
| !!! | GTTCCGACCCGTTGTTGTTT+TGG | + | chr4.3:54216709-54216728 | None:intergenic | 50.0% |
| ACATCCACTGGAGGAACTGG+AGG | + | chr4.3:54217995-54218014 | None:intergenic | 55.0% | |
| AGGACGCTGCTGCAATTCAG+TGG | + | chr4.3:54220480-54220499 | None:intergenic | 55.0% | |
| ATGTTCCTGCGGGGATCCAA+GGG | - | chr4.3:54219697-54219716 | MS.gene45344:intron | 55.0% | |
| CACACATCCACTGGAGGAAC+TGG | + | chr4.3:54217998-54218017 | None:intergenic | 55.0% | |
| CACGAACCCTGGTGCATACA+TGG | + | chr4.3:54220375-54220394 | None:intergenic | 55.0% | |
| CATGTATGCACCAGGGTTCG+TGG | - | chr4.3:54220373-54220392 | MS.gene45344:CDS | 55.0% | |
| CCTCGACTACCTGATGAACC+AGG | + | chr4.3:54220536-54220555 | None:intergenic | 55.0% | |
| CCTGGTTCATCAGGTAGTCG+AGG | - | chr4.3:54220533-54220552 | MS.gene45344:CDS | 55.0% | |
| CGAGGGAGACCATCATTTCG+TGG | - | chr4.3:54220551-54220570 | MS.gene45344:CDS | 55.0% | |
| CGTCATCATCGTCGACGTCT+GGG | - | chr4.3:54217074-54217093 | MS.gene45344:CDS | 55.0% | |
| GGACGCTGCTGCAATTCAGT+GGG | + | chr4.3:54220479-54220498 | None:intergenic | 55.0% | |
| GGGTGACCCTCCTTCAATTG+AGG | - | chr4.3:54216961-54216980 | MS.gene45344:CDS | 55.0% | |
| GGGTTGAAGTGATCATGCGG+AGG | + | chr4.3:54218821-54218840 | None:intergenic | 55.0% | |
| GTCTCCGCCGAAAAAGGGTT+CGG | + | chr4.3:54216866-54216885 | None:intergenic | 55.0% | |
| GTCTCCGCCGTAACAAGGTT+CGG | + | chr4.3:54216737-54216756 | None:intergenic | 55.0% | |
| GTGTTGAAGTGACCATGCGG+AGG | - | chr4.3:54218661-54218680 | MS.gene45344:intron | 55.0% | |
| GTTAGTTGGAGTGCGGCTGA+TGG | - | chr4.3:54217169-54217188 | MS.gene45344:CDS | 55.0% | |
| TAGGTGTCTCTGCCGCAACA+GGG | + | chr4.3:54216796-54216815 | None:intergenic | 55.0% | |
| TCGTCATCATCGTCGACGTC+TGG | - | chr4.3:54217073-54217092 | MS.gene45344:CDS | 55.0% | |
| TCTCCGCCGAAAAAGGGTTC+GGG | + | chr4.3:54216865-54216884 | None:intergenic | 55.0% | |
| TCTCCGCCGTAACAAGGTTC+GGG | + | chr4.3:54216736-54216755 | None:intergenic | 55.0% | |
| TGACCCGAACCTTGTTACGG+CGG | - | chr4.3:54216730-54216749 | MS.gene45344:CDS | 55.0% | |
| TTAGGTGTCTCTGCCGCAAC+AGG | + | chr4.3:54216797-54216816 | None:intergenic | 55.0% | |
| TTTGCCTCCAGTTCCTCCAG+TGG | - | chr4.3:54217988-54218007 | MS.gene45344:intron | 55.0% | |
| ! | GGTGCTACAGGTGCATTAGG+AGG | + | chr4.3:54219975-54219994 | None:intergenic | 55.0% |
| ! | GTACCAAGCTTTTCGGCCAC+CGG | + | chr4.3:54216890-54216909 | None:intergenic | 55.0% |
| !!! | TGACCCGAACCCTTTTTCGG+CGG | - | chr4.3:54216859-54216878 | MS.gene45344:CDS | 55.0% |
| !!! | TGGTTTTGACCCACGAACCC+TGG | + | chr4.3:54220386-54220405 | None:intergenic | 55.0% |
| ACACCGGTGGCCGAAAAGCT+TGG | - | chr4.3:54216884-54216903 | MS.gene45344:CDS | 60.0% | |
| ACCGGTGTCTCCGCCGAAAA+AGG | + | chr4.3:54216872-54216891 | None:intergenic | 60.0% | |
| CCGGTGTCTCCGCCGAAAAA+GGG | + | chr4.3:54216871-54216890 | None:intergenic | 60.0% | |
| CCTTGTTACGGCGGAGACAC+CGG | - | chr4.3:54216739-54216758 | MS.gene45344:CDS | 60.0% | |
| CGCTGCTGCAATTCAGTGGG+TGG | + | chr4.3:54220476-54220495 | None:intergenic | 60.0% | |
| GATGTTCCTGCGGGGATCCA+AGG | - | chr4.3:54219696-54219715 | MS.gene45344:intron | 60.0% | |
| GATTTGGCCCCCTCTTCGAC+TGG | + | chr4.3:54219071-54219090 | None:intergenic | 60.0% | |
| GCCGTAACAAGGTTCGGGTC+AGG | + | chr4.3:54216731-54216750 | None:intergenic | 60.0% | |
| GGAGAGGATGGCGACCTTCA+AGG | - | chr4.3:54220582-54220601 | MS.gene45344:CDS | 60.0% | |
| TGCTGCAGGTGCGTTAGGGA+CGG | + | chr4.3:54220015-54220034 | None:intergenic | 60.0% | |
| TGTTCCTGCGGGGATCCAAG+GGG | - | chr4.3:54219698-54219717 | MS.gene45344:intron | 60.0% | |
| TTTGGAGGCAGGGTAGGCTG+TGG | + | chr4.3:54220188-54220207 | None:intergenic | 60.0% | |
| ! | CCATCATTTCGTGGTGCCGG+CGG | - | chr4.3:54220560-54220579 | MS.gene45344:CDS | 60.0% |
| ! | GTGCTGCTGCAGGTGCGTTA+GGG | + | chr4.3:54220019-54220038 | None:intergenic | 60.0% |
| !! | CATCATTTCGTGGTGCCGGC+GGG | - | chr4.3:54220561-54220580 | MS.gene45344:CDS | 60.0% |
| !! | TTTTTCGGCGGAGACACCGG+TGG | - | chr4.3:54216871-54216890 | MS.gene45344:CDS | 60.0% |
| !!! | CCCTTTTTCGGCGGAGACAC+CGG | - | chr4.3:54216868-54216887 | MS.gene45344:CDS | 60.0% |
| AGGGTAGGCTGTGGCTGCTG+TGG | + | chr4.3:54220179-54220198 | None:intergenic | 65.0% | |
| CCGCCGGCACCACGAAATGA+TGG | + | chr4.3:54220563-54220582 | None:intergenic | 65.0% | |
| CCGGTGTCTCCGCCGTAACA+AGG | + | chr4.3:54216742-54216761 | None:intergenic | 65.0% | |
| GCAGGTGCGTTAGGGACGGT+AGG | + | chr4.3:54220011-54220030 | None:intergenic | 65.0% | |
| GTTCCTGCGGGGATCCAAGG+GGG | - | chr4.3:54219699-54219718 | MS.gene45344:intron | 65.0% | |
| !! | GGTGCTGCTGCAGGTGCGTT+AGG | + | chr4.3:54220020-54220039 | None:intergenic | 65.0% |
| AGGTCGCCATCCTCTCCCGC+CGG | + | chr4.3:54220579-54220598 | None:intergenic | 70.0% | |
| GTTCCCCCTTGGATCCCCGC+AGG | + | chr4.3:54219705-54219724 | None:intergenic | 70.0% | |
| !! | TTTCGTGGTGCCGGCGGGAG+AGG | - | chr4.3:54220566-54220585 | MS.gene45344:CDS | 70.0% |
| !! | GTGGTGCCGGCGGGAGAGGA+TGG | - | chr4.3:54220570-54220589 | MS.gene45344:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 54216698 | 54220607 | 54216698 | ID=MS.gene45344 |
| chr4.3 | mRNA | 54216698 | 54220607 | 54216698 | ID=MS.gene45344.t1;Parent=MS.gene45344 |
| chr4.3 | exon | 54220053 | 54220607 | 54220053 | ID=MS.gene45344.t1.exon1;Parent=MS.gene45344.t1 |
| chr4.3 | CDS | 54220053 | 54220607 | 54220053 | ID=cds.MS.gene45344.t1;Parent=MS.gene45344.t1 |
| chr4.3 | exon | 54219242 | 54219319 | 54219242 | ID=MS.gene45344.t1.exon2;Parent=MS.gene45344.t1 |
| chr4.3 | CDS | 54219242 | 54219319 | 54219242 | ID=cds.MS.gene45344.t1;Parent=MS.gene45344.t1 |
| chr4.3 | exon | 54216698 | 54217774 | 54216698 | ID=MS.gene45344.t1.exon3;Parent=MS.gene45344.t1 |
| chr4.3 | CDS | 54216698 | 54217774 | 54216698 | ID=cds.MS.gene45344.t1;Parent=MS.gene45344.t1 |
| Gene Sequence |
| Protein sequence |
