Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046040.t1 | XP_013442872.1 | 75.3 | 567 | 52 | 1 | 1 | 479 | 1 | 567 | 1.50E-223 | 785.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046040.t1 | Q96HR8 | 32.2 | 202 | 124 | 6 | 69 | 265 | 153 | 346 | 1.1e-14 | 82.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046040.t1 | G7ZX23 | 75.3 | 567 | 52 | 1 | 1 | 479 | 1 | 567 | 1.1e-223 | 785.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046040.t1 | MTR_0072s0050 | 97.668 | 386 | 9 | 0 | 94 | 479 | 182 | 567 | 0.0 | 782 |
| MS.gene046040.t1 | MTR_0072s0050 | 91.579 | 95 | 8 | 0 | 1 | 95 | 1 | 95 | 9.93e-46 | 167 |
| MS.gene046040.t1 | MTR_2g090095 | 46.617 | 399 | 163 | 13 | 94 | 467 | 156 | 529 | 4.63e-89 | 285 |
| MS.gene046040.t1 | MTR_2g090095 | 48.916 | 323 | 128 | 9 | 113 | 414 | 1 | 307 | 4.56e-80 | 256 |
| MS.gene046040.t1 | MTR_7g116780 | 35.971 | 139 | 73 | 2 | 137 | 275 | 5 | 127 | 2.21e-16 | 75.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046040.t1 | AT1G03530 | 66.667 | 168 | 54 | 2 | 94 | 260 | 362 | 528 | 1.15e-68 | 234 |
Find 144 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCCGACCCGTTATTGTTT+TGG | 0.239619 | 4.4:+57379476 | None:intergenic |
| AGCACATGTTCAGCAAATTC+TGG | 0.272472 | 4.4:+57376517 | None:intergenic |
| CAGCGTCCTAGTCCTATTTC+TGG | 0.273259 | 4.4:-57375770 | MS.gene046040:CDS |
| TTAGGTGTCTCCGCCGGAAC+AGG | 0.273646 | 4.4:+57379388 | None:intergenic |
| TGCTGTTGAAATGGAATTCC+TGG | 0.277475 | 4.4:+57375986 | None:intergenic |
| TCTCATCAGTTTCCTGTTCC+AGG | 0.277521 | 4.4:-57376004 | MS.gene046040:CDS |
| CCTTGTCCAATGCCTGAAAA+TGG | 0.289624 | 4.4:+57376196 | None:intergenic |
| GGTTTAGTTGATGAAATCTT+TGG | 0.291789 | 4.4:-57376634 | MS.gene046040:CDS |
| TGAACATGTGCTCAATAATA+AGG | 0.296281 | 4.4:-57376506 | MS.gene046040:CDS |
| AAGTTAGGACCTGCATTTAA+AGG | 0.297546 | 4.4:+57376145 | None:intergenic |
| ACCGGTGTCTCCGCCGCAAA+AGG | 0.306217 | 4.4:+57379313 | None:intergenic |
| ATTGAATTTGCAGCAAAGTT+AGG | 0.318590 | 4.4:+57376130 | None:intergenic |
| GTCTCCGCCGCAAAAGGGTT+CGG | 0.327137 | 4.4:+57379319 | None:intergenic |
| GCCGAAAAGCTTGGTACTTC+GGG | 0.336858 | 4.4:-57379289 | MS.gene046040:CDS |
| GGGTTGTTGTGAAAATATAT+TGG | 0.347751 | 4.4:+57375910 | None:intergenic |
| TCAATAATAAGGATCTTTAC+AGG | 0.352711 | 4.4:-57376495 | MS.gene046040:CDS |
| GGAAGGATTGTTGTGGCATT+TGG | 0.353332 | 4.4:+57375858 | None:intergenic |
| GGTGCTGCTGCAGGTGCGTT+AGG | 0.356349 | 4.4:+57376244 | None:intergenic |
| GCATTTGAAGGAAATGCATT+TGG | 0.370357 | 4.4:+57376058 | None:intergenic |
| CACACATCCACTGGAGGAAC+TGG | 0.373095 | 4.4:+57378266 | None:intergenic |
| GTCTCCGCCGTAACAACGTT+CGG | 0.375840 | 4.4:+57379448 | None:intergenic |
| TGAGAGGGGTTGCCAGAAAT+AGG | 0.376962 | 4.4:+57375758 | None:intergenic |
| TATCTTTCAAGCGCAGCAAC+AGG | 0.387602 | 4.4:-57375816 | MS.gene046040:CDS |
| CCTGCATTTAAAGGTTGAAA+TGG | 0.393296 | 4.4:+57376154 | None:intergenic |
| GGAGGTAACACATGCTCTTT+CGG | 0.393457 | 4.4:+57376307 | None:intergenic |
| GCAGCACCATTCGTTAATAA+AGG | 0.396892 | 4.4:-57376229 | MS.gene046040:CDS |
| GGATTCATTTGCTGTTGAAA+TGG | 0.402802 | 4.4:+57375977 | None:intergenic |
| TCTCCGCCGCAAAAGGGTTC+GGG | 0.408584 | 4.4:+57379320 | None:intergenic |
| TTGTATCTCACAACATAATA+CGG | 0.411728 | 4.4:+57376598 | None:intergenic |
| CAATTTCATCCAGGTTCATC+AGG | 0.411756 | 4.4:-57375737 | MS.gene046040:CDS |
| GGTTGTTGTGAAAATATATT+GGG | 0.420648 | 4.4:+57375911 | None:intergenic |
| TGTTGCTGCGCTTGAAAGAT+AGG | 0.421882 | 4.4:+57375818 | None:intergenic |
| GGCCGAAAAGCTTGGTACTT+CGG | 0.424127 | 4.4:-57379290 | MS.gene046040:CDS |
| TCATTTCAATGTCACCTTGA+AGG | 0.425382 | 4.4:+57375665 | None:intergenic |
| CGAGGGAGACCGTCATTTCA+TGG | 0.429732 | 4.4:-57375710 | MS.gene046040:CDS |
| CACAAACCCAGGTGCATACA+TGG | 0.437862 | 4.4:+57375889 | None:intergenic |
| CGTTAACAACAACCCTGTTC+CGG | 0.440269 | 4.4:-57379401 | MS.gene046040:CDS |
| TGGAAACCCAAAACAATAAC+GGG | 0.448647 | 4.4:-57379483 | MS.gene046040:CDS |
| TGAAATGGAATTCCTGGAAC+AGG | 0.448959 | 4.4:+57375992 | None:intergenic |
| CCATTTCAACCTTTAAATGC+AGG | 0.448987 | 4.4:-57376154 | MS.gene046040:CDS |
| GTGGAAAGGATCACGTTAAC+GGG | 0.452065 | 4.4:-57379241 | MS.gene046040:CDS |
| CGTGGAAAGGATCACGTTAA+CGG | 0.452422 | 4.4:-57379242 | MS.gene046040:CDS |
| GATGTTCCTGCGGGGATCCA+AGG | 0.456245 | 4.4:-57376565 | MS.gene046040:CDS |
| GGAGAGGATGGCGACCTTCA+AGG | 0.458321 | 4.4:-57375679 | MS.gene046040:CDS |
| CAACTAAACCTAGTGGTTTG+CGG | 0.462976 | 4.4:+57376647 | None:intergenic |
| CAACAACCCATGTATGCACC+TGG | 0.466001 | 4.4:-57375896 | MS.gene046040:CDS |
| AATATATTGGGCTGTACCCC+AGG | 0.469285 | 4.4:+57375923 | None:intergenic |
| TCTCCGCCGTAACAACGTTC+GGG | 0.469542 | 4.4:+57379449 | None:intergenic |
| GCCGTAACAACGTTCGGGTC+AGG | 0.470459 | 4.4:+57379454 | None:intergenic |
| AAAAGCTTAGCAACAACAAC+GGG | 0.470692 | 4.4:-57379354 | MS.gene046040:CDS |
| CATGTATGCACCTGGGTTTG+TGG | 0.471078 | 4.4:-57375888 | MS.gene046040:CDS |
| CATTTCCCAACTATGATGCC+TGG | 0.471966 | 4.4:-57375941 | MS.gene046040:CDS |
| AGAACAGAACCCTCATTAAG+AGG | 0.475235 | 4.4:+57376685 | None:intergenic |
| TGTACCCCAGGCATCATAGT+TGG | 0.475387 | 4.4:+57375935 | None:intergenic |
| ATGAGAAAGAGGCTGAATAC+AGG | 0.476574 | 4.4:-57376408 | MS.gene046040:CDS |
| TGTGATGCTACAGGTGCATT+AGG | 0.479877 | 4.4:+57376286 | None:intergenic |
| TTTCATGGTGCCAGCGGGAG+AGG | 0.481532 | 4.4:-57375695 | MS.gene046040:CDS |
| CCGGTGTCTCCGCCGCAAAA+GGG | 0.482359 | 4.4:+57379314 | None:intergenic |
| ATGTTCCTGCGGGGATCCAA+GGG | 0.491170 | 4.4:-57376564 | MS.gene046040:CDS |
| AGGAAAGGCTATGATGCATC+TGG | 0.493922 | 4.4:-57376475 | MS.gene046040:CDS |
| GCAGGTGCGTTAGGGACGTT+AGG | 0.494815 | 4.4:+57376253 | None:intergenic |
| GTACCCCAGGCATCATAGTT+GGG | 0.495295 | 4.4:+57375936 | None:intergenic |
| TAATATGACATGGCATTTGA+AGG | 0.495859 | 4.4:+57376046 | None:intergenic |
| ACCTGACCCGAACGTTGTTA+CGG | 0.496041 | 4.4:-57379455 | MS.gene046040:CDS |
| TGGGAAATGAGTTCCGTGAC+TGG | 0.498859 | 4.4:+57375955 | None:intergenic |
| TTAACGAATGGTGCTGCTGC+AGG | 0.503864 | 4.4:+57376235 | None:intergenic |
| GGGGTAAATGATCAAAATCC+TGG | 0.504975 | 4.4:-57376361 | MS.gene046040:CDS |
| ATGGAAACCCAAAACAATAA+CGG | 0.505484 | 4.4:-57379484 | MS.gene046040:CDS |
| GTGCTGCTGCAGGTGCGTTA+GGG | 0.506725 | 4.4:+57376245 | None:intergenic |
| ATTTCCCAACTATGATGCCT+GGG | 0.507129 | 4.4:-57375940 | MS.gene046040:CDS |
| ATGTATGCACCTGGGTTTGT+GGG | 0.510071 | 4.4:-57375887 | MS.gene046040:CDS |
| AGTTGATGAAATCTTTGGAC+CGG | 0.513400 | 4.4:-57376629 | MS.gene046040:CDS |
| TCTGAAAATGATGTTCCTGC+GGG | 0.528260 | 4.4:-57376574 | MS.gene046040:CDS |
| TTTGAAGGAAATGCATTTGG+AGG | 0.531200 | 4.4:+57376061 | None:intergenic |
| ACACCGGTGGCCGAAAAGCT+TGG | 0.531813 | 4.4:-57379298 | MS.gene046040:CDS |
| ATGGTGCCAGCGGGAGAGGA+TGG | 0.532064 | 4.4:-57375691 | MS.gene046040:CDS |
| CCTCGACTACCTGATGAACC+TGG | 0.535590 | 4.4:+57375728 | None:intergenic |
| TTTCTTCTTTGACAGACTCT+CGG | 0.535720 | 4.4:-57376745 | MS.gene046040:intron |
| AATGCATTTGGAGGCAGAGA+AGG | 0.536833 | 4.4:+57376070 | None:intergenic |
| AACCCCTCTCAATTTCATCC+AGG | 0.537611 | 4.4:-57375746 | MS.gene046040:CDS |
| CGTTGTTACGGCGGAGACAC+CGG | 0.542140 | 4.4:-57379443 | MS.gene046040:CDS |
| AATAAGGATCTTTACAGGAA+AGG | 0.542882 | 4.4:-57376490 | MS.gene046040:CDS |
| GGGAAATGAGTTCCGTGACT+GGG | 0.545756 | 4.4:+57375956 | None:intergenic |
| CGTCATTTCATGGTGCCAGC+GGG | 0.547289 | 4.4:-57375700 | MS.gene046040:CDS |
| TAGGTGTCTCCGCCGGAACA+GGG | 0.550047 | 4.4:+57379389 | None:intergenic |
| TTAATGAGGGTTCTGTTCTG+TGG | 0.552326 | 4.4:-57376681 | MS.gene046040:CDS |
| TTCCCATTCACCTCAACTGA+AGG | 0.552799 | 4.4:+57379211 | None:intergenic |
| GAAGCATGAACCTCTTAATG+AGG | 0.553949 | 4.4:-57376695 | MS.gene046040:CDS |
| AGGTCGCCATCCTCTCCCGC+TGG | 0.554202 | 4.4:+57375685 | None:intergenic |
| TAGTTTCCTTTATTAACGAA+TGG | 0.555179 | 4.4:+57376223 | None:intergenic |
| GGTGCTAAACACACATCCAC+TGG | 0.561774 | 4.4:+57378257 | None:intergenic |
| TGTATCTCACAACATAATAC+GGG | 0.565567 | 4.4:+57376599 | None:intergenic |
| CGTTAACGTGATCCTTTCCA+CGG | 0.570914 | 4.4:+57379243 | None:intergenic |
| CGCTGCTGCAATTCAGAGGG+TGG | 0.572395 | 4.4:+57375788 | None:intergenic |
| TGTGGCTTAGGTGTCTCCGC+CGG | 0.572919 | 4.4:+57379382 | None:intergenic |
| CCATTCACCTCAACTGAAGG+AGG | 0.576452 | 4.4:+57379214 | None:intergenic |
| CCAGGTTCATCAGGTAGTCG+AGG | 0.578970 | 4.4:-57375728 | MS.gene046040:CDS |
| TTCTGAAAATGATGTTCCTG+CGG | 0.582447 | 4.4:-57376575 | MS.gene046040:CDS |
| ACTGAAAGCCGCAAACCACT+AGG | 0.586696 | 4.4:-57376655 | MS.gene046040:CDS |
| ATCTTTCAAGCGCAGCAACA+GGG | 0.590414 | 4.4:-57375815 | MS.gene046040:CDS |
| TTTGCCTCCAGTTCCTCCAG+TGG | 0.595735 | 4.4:-57378273 | MS.gene046040:CDS |
| CCGCTGGCACCATGAAATGA+CGG | 0.597561 | 4.4:+57375701 | None:intergenic |
| GGGTTGCCAGAAATAGGACT+AGG | 0.599568 | 4.4:+57375764 | None:intergenic |
| CCGTCATTTCATGGTGCCAG+CGG | 0.605138 | 4.4:-57375701 | MS.gene046040:CDS |
| AGGACGCTGCTGCAATTCAG+AGG | 0.608620 | 4.4:+57375784 | None:intergenic |
| TCTCGGAGCTCAAGTCATTG+TGG | 0.608772 | 4.4:-57376728 | MS.gene046040:CDS |
| GATGCTACAGGTGCATTAGG+AGG | 0.610764 | 4.4:+57376289 | None:intergenic |
| GGAGCTCAAGTCATTGTGGA+AGG | 0.615668 | 4.4:-57376724 | MS.gene046040:CDS |
| GGGTGACCCTCCTTCAGTTG+AGG | 0.622504 | 4.4:-57379221 | MS.gene046040:intron |
| CACCATAAAATGCTACCTGT+GGG | 0.623469 | 4.4:-57378233 | MS.gene046040:CDS |
| TTTGGAGGCAGAGAAGGTTG+TGG | 0.623855 | 4.4:+57376076 | None:intergenic |
| AACACATGCTGTGATGCTAC+AGG | 0.624897 | 4.4:+57376277 | None:intergenic |
| CAGGTTCATCAGGTAGTCGA+GGG | 0.625439 | 4.4:-57375727 | MS.gene046040:CDS |
| AACCCAAAACAATAACGGGT+CGG | 0.626765 | 4.4:-57379479 | MS.gene046040:CDS |
| AGAGAAGGTTGTGGCTGCTG+TGG | 0.626989 | 4.4:+57376085 | None:intergenic |
| ATCTGTTGGAAGGATTGTTG+TGG | 0.627519 | 4.4:+57375851 | None:intergenic |
| TCAAGTCATTGTGGAAGGAG+TGG | 0.631477 | 4.4:-57376719 | MS.gene046040:CDS |
| ATTTCATCAACTAAACCTAG+TGG | 0.632993 | 4.4:+57376640 | None:intergenic |
| ACCGACATAACAACTCCCAC+AGG | 0.634585 | 4.4:+57378218 | None:intergenic |
| ACACCATAAAATGCTACCTG+TGG | 0.634996 | 4.4:-57378234 | MS.gene046040:CDS |
| TAGGTGGTTGCTGAATCTGT+TGG | 0.639877 | 4.4:+57375837 | None:intergenic |
| AAGCATGAACCTCTTAATGA+GGG | 0.641077 | 4.4:-57376694 | MS.gene046040:CDS |
| AGGTTGAAATGGAGAAACTG+TGG | 0.644150 | 4.4:+57376165 | None:intergenic |
| GGACGCTGCTGCAATTCAGA+GGG | 0.644893 | 4.4:+57375785 | None:intergenic |
| CAGCAAATGAATCCCAGTCA+CGG | 0.647461 | 4.4:-57375968 | MS.gene046040:CDS |
| GAACCTGGATGAAATTGAGA+GGG | 0.648070 | 4.4:+57375743 | None:intergenic |
| GTTCCTGCGGGGATCCAAGG+GGG | 0.649023 | 4.4:-57376562 | MS.gene046040:CDS |
| ACATCCACTGGAGGAACTGG+AGG | 0.650287 | 4.4:+57378269 | None:intergenic |
| TGGTTGCTGAATCTGTTGGA+AGG | 0.656336 | 4.4:+57375841 | None:intergenic |
| ACAAACCCAGGTGCATACAT+GGG | 0.661903 | 4.4:+57375890 | None:intergenic |
| TAACAACAACCCTGTTCCGG+CGG | 0.661927 | 4.4:-57379398 | MS.gene046040:CDS |
| ACCTGTGGGAGTTGTTATGT+CGG | 0.664217 | 4.4:-57378219 | MS.gene046040:intron |
| CATTCACCTCAACTGAAGGA+GGG | 0.666277 | 4.4:+57379215 | None:intergenic |
| AACAACCCATGTATGCACCT+GGG | 0.666334 | 4.4:-57375895 | MS.gene046040:CDS |
| TGCTGCGCTTGAAAGATAGG+TGG | 0.668240 | 4.4:+57375821 | None:intergenic |
| TTTCCCAACTATGATGCCTG+GGG | 0.674017 | 4.4:-57375939 | MS.gene046040:CDS |
| GCTAAACACACATCCACTGG+AGG | 0.675971 | 4.4:+57378260 | None:intergenic |
| GAAAAGCTTAGCAACAACAA+CGG | 0.677921 | 4.4:-57379355 | MS.gene046040:CDS |
| ACTTTGCTGCAAATTCAATG+TGG | 0.680521 | 4.4:-57376126 | MS.gene046040:CDS |
| TGAACCTGGATGAAATTGAG+AGG | 0.688464 | 4.4:+57375742 | None:intergenic |
| TGTTCCTGCGGGGATCCAAG+GGG | 0.689084 | 4.4:-57376563 | MS.gene046040:CDS |
| TGACCCGAACGTTGTTACGG+CGG | 0.695338 | 4.4:-57379452 | MS.gene046040:CDS |
| CTGAAAATGATGTTCCTGCG+GGG | 0.698469 | 4.4:-57376573 | MS.gene046040:CDS |
| AACCTGGATGAAATTGAGAG+GGG | 0.753765 | 4.4:+57375744 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATTAAGATAATTAAAGA+TGG | - | chr4.4:57376478-57376497 | MS.gene046040:CDS | 10.0% |
| !! | TAATTAAGATAATTAAAGAT+GGG | - | chr4.4:57376479-57376498 | MS.gene046040:CDS | 10.0% |
| !! | AATTAAGATAATTAAAGATG+GGG | - | chr4.4:57376480-57376499 | MS.gene046040:CDS | 15.0% |
| !! | AATACATGAAATATATCAGA+AGG | - | chr4.4:57378363-57378382 | MS.gene046040:intron | 20.0% |
| !! | ACACTTGATTTAAAAAGATA+GGG | + | chr4.4:57378322-57378341 | None:intergenic | 20.0% |
| !! | ACTAATGATAATATGATGTT+TGG | + | chr4.4:57377270-57377289 | None:intergenic | 20.0% |
| !! | ATACATGAAATATATCAGAA+GGG | - | chr4.4:57378364-57378383 | MS.gene046040:intron | 20.0% |
| !! | TTAAAAAATTCCAAACTTTC+TGG | + | chr4.4:57377207-57377226 | None:intergenic | 20.0% |
| !!! | AAATAAAGGTATTTGAGTAA+CGG | + | chr4.4:57377830-57377849 | None:intergenic | 20.0% |
| !!! | AACTTTGAAAATATCTTGAA+TGG | - | chr4.4:57376848-57376867 | MS.gene046040:intron | 20.0% |
| !!! | ATTATCTGGTTTTATTTAGA+AGG | - | chr4.4:57376401-57376420 | MS.gene046040:CDS | 20.0% |
| !!! | TATTTGATTTTTCATGTAAC+TGG | + | chr4.4:57377177-57377196 | None:intergenic | 20.0% |
| !!! | TTTATTTTCATTCGTAAAGT+AGG | - | chr4.4:57376255-57376274 | MS.gene046040:CDS | 20.0% |
| ! | CACAAAAAACTTGAACATAA+GGG | + | chr4.4:57377880-57377899 | None:intergenic | 25.0% |
| ! | CATATCTTTCTTGATTTCTT+TGG | + | chr4.4:57376577-57376596 | None:intergenic | 25.0% |
| ! | GAATACTTGAATTCCATTTA+GGG | + | chr4.4:57377693-57377712 | None:intergenic | 25.0% |
| ! | GACACTTGATTTAAAAAGAT+AGG | + | chr4.4:57378323-57378342 | None:intergenic | 25.0% |
| ! | GGTTGTTGTGAAAATATATT+GGG | + | chr4.4:57379252-57379271 | None:intergenic | 25.0% |
| ! | TACATGAAATATATCAGAAG+GGG | - | chr4.4:57378365-57378384 | MS.gene046040:intron | 25.0% |
| ! | TAGAATAGTAGATGAACAAA+AGG | - | chr4.4:57376999-57377018 | MS.gene046040:intron | 25.0% |
| ! | TAGTTTCCTTTATTAACGAA+TGG | + | chr4.4:57378940-57378959 | None:intergenic | 25.0% |
| ! | TCAATAATAAGGATCTTTAC+AGG | - | chr4.4:57378665-57378684 | MS.gene046040:intron | 25.0% |
| ! | TGAATACTTGAATTCCATTT+AGG | + | chr4.4:57377694-57377713 | None:intergenic | 25.0% |
| ! | TTCAAATTAACATGTCCAAT+AGG | + | chr4.4:57376710-57376729 | None:intergenic | 25.0% |
| ! | TTGTATCTCACAACATAATA+CGG | + | chr4.4:57378565-57378584 | None:intergenic | 25.0% |
| !! | ATCTCATTCTTTGACTTAAT+TGG | + | chr4.4:57376213-57376232 | None:intergenic | 25.0% |
| !! | ATGGTTCATTGATAATAATC+TGG | - | chr4.4:57376518-57376537 | MS.gene046040:CDS | 25.0% |
| !! | GATAAAAATGATGGAAGTAA+AGG | - | chr4.4:57375976-57375995 | MS.gene046040:CDS | 25.0% |
| !! | TGGTTCATTGATAATAATCT+GGG | - | chr4.4:57376519-57376538 | MS.gene046040:CDS | 25.0% |
| !! | TGGTTGATTCTAAGAATAAT+TGG | + | chr4.4:57378393-57378412 | None:intergenic | 25.0% |
| !! | TTTTCTTCATAACATGTTTC+TGG | + | chr4.4:57376553-57376572 | None:intergenic | 25.0% |
| !!! | GAAGAGCTTTTTTTTGAATA+AGG | - | chr4.4:57376810-57376829 | MS.gene046040:intron | 25.0% |
| !!! | TTATTGTTTTTTTTCTTGCC+AGG | + | chr4.4:57378820-57378839 | None:intergenic | 25.0% |
| !!! | TTTTTTGTTGTGACCAATTT+GGG | - | chr4.4:57377353-57377372 | MS.gene046040:intron | 25.0% |
| !!! | TTTTTTTGTTGTGACCAATT+TGG | - | chr4.4:57377352-57377371 | MS.gene046040:intron | 25.0% |
| AAATAACAGTGTAGAACTTG+AGG | + | chr4.4:57377781-57377800 | None:intergenic | 30.0% | |
| AAATCCCTAAGAATAGTAGT+TGG | - | chr4.4:57377928-57377947 | MS.gene046040:intron | 30.0% | |
| AAATCCTAGACCTTCAAAAT+TGG | + | chr4.4:57376685-57376704 | None:intergenic | 30.0% | |
| AAGCATATGAAACTGGATAT+AGG | + | chr4.4:57378027-57378046 | None:intergenic | 30.0% | |
| AATAACAGTGTAGAACTTGA+GGG | + | chr4.4:57377780-57377799 | None:intergenic | 30.0% | |
| AATAAGGATCTTTACAGGAA+AGG | - | chr4.4:57378670-57378689 | MS.gene046040:intron | 30.0% | |
| AATTCCTATTGAAAAATCCG+TGG | - | chr4.4:57375900-57375919 | MS.gene046040:CDS | 30.0% | |
| ACAACCAACTACTATTCTTA+GGG | + | chr4.4:57377935-57377954 | None:intergenic | 30.0% | |
| ATAGTAGTTACCAGAAAGTT+TGG | - | chr4.4:57377194-57377213 | MS.gene046040:intron | 30.0% | |
| ATGCTTCATTGACAATTATC+TGG | - | chr4.4:57376387-57376406 | MS.gene046040:CDS | 30.0% | |
| ATGGAAACCCAAAACAATAA+CGG | - | chr4.4:57375676-57375695 | MS.gene046040:CDS | 30.0% | |
| ATTAATTAATTGCGTAGTGC+TGG | - | chr4.4:57376428-57376447 | MS.gene046040:CDS | 30.0% | |
| ATTGAATTTGCAGCAAAGTT+AGG | + | chr4.4:57379033-57379052 | None:intergenic | 30.0% | |
| ATTTCATCAACTAAACCTAG+TGG | + | chr4.4:57378523-57378542 | None:intergenic | 30.0% | |
| CAAAAGGAAATCATTGTGAA+TGG | - | chr4.4:57377015-57377034 | MS.gene046040:intron | 30.0% | |
| CCACAAAAAACTTGAACATA+AGG | + | chr4.4:57377881-57377900 | None:intergenic | 30.0% | |
| CTACTCATCTAATAACAGAT+GGG | + | chr4.4:57376982-57377001 | None:intergenic | 30.0% | |
| GACAAGGTTCAATCAAATAA+AGG | + | chr4.4:57377844-57377863 | None:intergenic | 30.0% | |
| GATATAGGAATGAGAAAGTT+TGG | + | chr4.4:57378012-57378031 | None:intergenic | 30.0% | |
| GATATGTATACTTGACAACA+CGG | - | chr4.4:57376591-57376610 | MS.gene046040:CDS | 30.0% | |
| GCAACTTAATCTTCTAGATT+AGG | - | chr4.4:57377439-57377458 | MS.gene046040:intron | 30.0% | |
| GCATCTAAATCTTCAAGATT+GGG | + | chr4.4:57377908-57377927 | None:intergenic | 30.0% | |
| GGGTTGTTGTGAAAATATAT+TGG | + | chr4.4:57379253-57379272 | None:intergenic | 30.0% | |
| GTATACGCAATTAAGCAATA+GGG | + | chr4.4:57377738-57377757 | None:intergenic | 30.0% | |
| TAAGTCAAAGAATGAGATTC+AGG | - | chr4.4:57376215-57376234 | MS.gene046040:CDS | 30.0% | |
| TAATATGACATGGCATTTGA+AGG | + | chr4.4:57379117-57379136 | None:intergenic | 30.0% | |
| TAATATGCTACATCTCACAA+TGG | - | chr4.4:57378078-57378097 | MS.gene046040:intron | 30.0% | |
| TCTACTCATCTAATAACAGA+TGG | + | chr4.4:57376983-57377002 | None:intergenic | 30.0% | |
| TGAACATGTGCTCAATAATA+AGG | - | chr4.4:57378654-57378673 | MS.gene046040:intron | 30.0% | |
| TGCATCTAAATCTTCAAGAT+TGG | + | chr4.4:57377909-57377928 | None:intergenic | 30.0% | |
| TGTATACGCAATTAAGCAAT+AGG | + | chr4.4:57377739-57377758 | None:intergenic | 30.0% | |
| TGTATCTCACAACATAATAC+GGG | + | chr4.4:57378564-57378583 | None:intergenic | 30.0% | |
| TGTTACAAAGCATATGAAAC+TGG | + | chr4.4:57378034-57378053 | None:intergenic | 30.0% | |
| ! | GTTTTGTGGATAATATGACA+TGG | + | chr4.4:57379127-57379146 | None:intergenic | 30.0% |
| ! | TGAGAAAATTGTGTGTTTTG+TGG | + | chr4.4:57379141-57379160 | None:intergenic | 30.0% |
| ! | TGTTAATTTGAAGAGAGCTT+TGG | - | chr4.4:57376718-57376737 | MS.gene046040:CDS | 30.0% |
| ! | TTTTCTTTCTCCAGTTGATT+GGG | - | chr4.4:57378292-57378311 | MS.gene046040:intron | 30.0% |
| ! | TTTTTCTTTCTCCAGTTGAT+TGG | - | chr4.4:57378291-57378310 | MS.gene046040:intron | 30.0% |
| !! | GGTTTAGTTGATGAAATCTT+TGG | - | chr4.4:57378526-57378545 | MS.gene046040:intron | 30.0% |
| !! | TGATTGCATAGAAAAGTACT+TGG | - | chr4.4:57376291-57376310 | MS.gene046040:CDS | 30.0% |
| !! | TTGAATTGCTTTTCCAATGT+TGG | - | chr4.4:57377800-57377819 | MS.gene046040:intron | 30.0% |
| !! | TTGTTGTTAACGAGATTTTG+AGG | + | chr4.4:57375751-57375770 | None:intergenic | 30.0% |
| !!! | AGATTTTGAGGTATTAGTTC+CGG | + | chr4.4:57375739-57375758 | None:intergenic | 30.0% |
| !!! | CCTTATGTTCAAGTTTTTTG+TGG | - | chr4.4:57377878-57377897 | MS.gene046040:intron | 30.0% |
| !!! | TGGTTTTGTTCCAATTTTGA+AGG | - | chr4.4:57376672-57376691 | MS.gene046040:CDS | 30.0% |
| AAAAGCTTAGCAACAACAAC+GGG | - | chr4.4:57375806-57375825 | MS.gene046040:CDS | 35.0% | |
| AAAGTGTGTTACGATGCATA+TGG | - | chr4.4:57377298-57377317 | MS.gene046040:intron | 35.0% | |
| AAGCATGAACCTCTTAATGA+GGG | - | chr4.4:57378466-57378485 | MS.gene046040:intron | 35.0% | |
| AAGTTAGGACCTGCATTTAA+AGG | + | chr4.4:57379018-57379037 | None:intergenic | 35.0% | |
| AATGAGAAAGTTTGGTTGTG+AGG | + | chr4.4:57378004-57378023 | None:intergenic | 35.0% | |
| ACTTTGCTGCAAATTCAATG+TGG | - | chr4.4:57379034-57379053 | MS.gene046040:intron | 35.0% | |
| AGTCTGTCAAAGAAGAAAGT+TGG | + | chr4.4:57378413-57378432 | None:intergenic | 35.0% | |
| ATGATGAGAAGATGGTTAGT+TGG | - | chr4.4:57376139-57376158 | MS.gene046040:CDS | 35.0% | |
| ATGCTGAAGAAGAAGAAGAA+GGG | - | chr4.4:57376106-57376125 | MS.gene046040:CDS | 35.0% | |
| ATTGCAGCAAATGAACTCAA+AGG | - | chr4.4:57377096-57377115 | MS.gene046040:intron | 35.0% | |
| CACAACCAACTACTATTCTT+AGG | + | chr4.4:57377936-57377955 | None:intergenic | 35.0% | |
| CATAATCACGCAACTTCTAA+AGG | - | chr4.4:57377483-57377502 | MS.gene046040:intron | 35.0% | |
| CCATTTCAACCTTTAAATGC+AGG | - | chr4.4:57379006-57379025 | MS.gene046040:intron | 35.0% | |
| CCTGCATTTAAAGGTTGAAA+TGG | + | chr4.4:57379009-57379028 | None:intergenic | 35.0% | |
| CGCAAAAAATGACAAAGAGA+GGG | - | chr4.4:57378779-57378798 | MS.gene046040:intron | 35.0% | |
| CTACAACTGTAGAAGCAATT+AGG | - | chr4.4:57377530-57377549 | MS.gene046040:intron | 35.0% | |
| CTATTGAAAAATCCGTGGAA+AGG | - | chr4.4:57375905-57375924 | MS.gene046040:CDS | 35.0% | |
| CTCACAATGGTCTGTTAAAA+AGG | - | chr4.4:57378091-57378110 | MS.gene046040:intron | 35.0% | |
| GAAAAGCTTAGCAACAACAA+CGG | - | chr4.4:57375805-57375824 | MS.gene046040:CDS | 35.0% | |
| GATGATGAAGATGTTGTAGT+AGG | - | chr4.4:57376186-57376205 | MS.gene046040:CDS | 35.0% | |
| GCAAAAAATGACAAAGAGAG+GGG | - | chr4.4:57378780-57378799 | MS.gene046040:intron | 35.0% | |
| GCATTTGAAGGAAATGCATT+TGG | + | chr4.4:57379105-57379124 | None:intergenic | 35.0% | |
| GGGAATGAGGATAAAAATGA+TGG | - | chr4.4:57375967-57375986 | MS.gene046040:CDS | 35.0% | |
| TGGAAACCCAAAACAATAAC+GGG | - | chr4.4:57375677-57375696 | MS.gene046040:CDS | 35.0% | |
| TGGTTGTGACATTCAATCAT+CGG | + | chr4.4:57377401-57377420 | None:intergenic | 35.0% | |
| TTTCTTCTTTGACAGACTCT+CGG | - | chr4.4:57378415-57378434 | MS.gene046040:intron | 35.0% | |
| TTTGAAGGAAATGCATTTGG+AGG | + | chr4.4:57379102-57379121 | None:intergenic | 35.0% | |
| ! | ACATAATACGGGTTTTTGAC+CGG | + | chr4.4:57378553-57378572 | None:intergenic | 35.0% |
| ! | ACTTCTAAAGGTGTAACTTG+AGG | - | chr4.4:57377495-57377514 | MS.gene046040:intron | 35.0% |
| ! | ATTCTTTTTGTGCGCAAGAT+CGG | - | chr4.4:57378055-57378074 | MS.gene046040:intron | 35.0% |
| ! | CTTCTAAAGGTGTAACTTGA+GGG | - | chr4.4:57377496-57377515 | MS.gene046040:intron | 35.0% |
| ! | GATAAGTGATGATGAGAAGA+TGG | - | chr4.4:57376131-57376150 | MS.gene046040:CDS | 35.0% |
| ! | GGAAACTATTCTCCATTTTC+AGG | - | chr4.4:57378952-57378971 | MS.gene046040:intron | 35.0% |
| ! | GTTTTCAGATGATGAGAAAG+AGG | - | chr4.4:57378741-57378760 | MS.gene046040:intron | 35.0% |
| ! | TGGGTTAGATTGTGAAACAT+GGG | - | chr4.4:57377129-57377148 | MS.gene046040:intron | 35.0% |
| ! | TTCTGAAAATGATGTTCCTG+CGG | - | chr4.4:57378585-57378604 | MS.gene046040:intron | 35.0% |
| !! | AGTTGATGAAATCTTTGGAC+CGG | - | chr4.4:57378531-57378550 | MS.gene046040:intron | 35.0% |
| !! | CTTTCCACGGATTTTTCAAT+AGG | + | chr4.4:57375907-57375926 | None:intergenic | 35.0% |
| !! | GGATTCATTTGCTGTTGAAA+TGG | + | chr4.4:57379186-57379205 | None:intergenic | 35.0% |
| !! | TATTCTCCATTTTCAGGCAT+TGG | - | chr4.4:57378958-57378977 | MS.gene046040:intron | 35.0% |
| !! | TGTTCCAATTTTGAAGGTCT+AGG | - | chr4.4:57376678-57376697 | MS.gene046040:CDS | 35.0% |
| !! | TTGCATAGAAAAGTACTTGG+TGG | - | chr4.4:57376294-57376313 | MS.gene046040:CDS | 35.0% |
| !! | TTGTTGTTGCTAAGCTTTTC+AGG | + | chr4.4:57375805-57375824 | None:intergenic | 35.0% |
| !!! | AATGGCAAGATTTTGAAACC+TGG | - | chr4.4:57377033-57377052 | MS.gene046040:intron | 35.0% |
| !!! | ATGGCAAGATTTTGAAACCT+GGG | - | chr4.4:57377034-57377053 | MS.gene046040:intron | 35.0% |
| AACCTGGATGAAATTGAGAG+GGG | + | chr4.4:57379419-57379438 | None:intergenic | 40.0% | |
| AACTCAAAGGAAGGTTCATG+TGG | - | chr4.4:57377109-57377128 | MS.gene046040:intron | 40.0% | |
| AAGTTTGGTTGTGAGGATGT+AGG | + | chr4.4:57377997-57378016 | None:intergenic | 40.0% | |
| ACACCATAAAATGCTACCTG+TGG | - | chr4.4:57376926-57376945 | MS.gene046040:intron | 40.0% | |
| ACTCAAAGGAAGGTTCATGT+GGG | - | chr4.4:57377110-57377129 | MS.gene046040:intron | 40.0% | |
| AGAACAGAACCCTCATTAAG+AGG | + | chr4.4:57378478-57378497 | None:intergenic | 40.0% | |
| AGCACATGTTCAGCAAATTC+TGG | + | chr4.4:57378646-57378665 | None:intergenic | 40.0% | |
| AGGTTGAAATGGAGAAACTG+TGG | + | chr4.4:57378998-57379017 | None:intergenic | 40.0% | |
| ATAGGGTTGAAGTGATCATG+CGG | + | chr4.4:57377721-57377740 | None:intergenic | 40.0% | |
| ATCTGTTGGAAGGATTGTTG+TGG | + | chr4.4:57379312-57379331 | None:intergenic | 40.0% | |
| ATGAGAAAGAGGCTGAATAC+AGG | - | chr4.4:57378752-57378771 | MS.gene046040:intron | 40.0% | |
| ATTCAACTACCAGTCGAAGA+GGG | - | chr4.4:57377958-57377977 | MS.gene046040:intron | 40.0% | |
| ATTCAATCATCGGTGGAAGA+GGG | + | chr4.4:57377391-57377410 | None:intergenic | 40.0% | |
| ATTTCCCAACTATGATGCCT+GGG | - | chr4.4:57379220-57379239 | MS.gene046040:intron | 40.0% | |
| CAAAAGACATTGTAGAGCAC+TGG | + | chr4.4:57378258-57378277 | None:intergenic | 40.0% | |
| CAACTAAACCTAGTGGTTTG+CGG | + | chr4.4:57378516-57378535 | None:intergenic | 40.0% | |
| CAATTTCATCCAGGTTCATC+AGG | - | chr4.4:57379423-57379442 | MS.gene046040:CDS | 40.0% | |
| CACCATAAAATGCTACCTGT+GGG | - | chr4.4:57376927-57376946 | MS.gene046040:intron | 40.0% | |
| CAGCAAATGAACTCAAAGGA+AGG | - | chr4.4:57377100-57377119 | MS.gene046040:intron | 40.0% | |
| CCATTTAGGGAAACAGCAAA+AGG | + | chr4.4:57377680-57377699 | None:intergenic | 40.0% | |
| CTGCAATGTCTTGTGGAATT+TGG | - | chr4.4:57378226-57378245 | MS.gene046040:CDS | 40.0% | |
| CTTTATGCAGCATAGCTAAG+AGG | + | chr4.4:57377599-57377618 | None:intergenic | 40.0% | |
| GAACCTGGATGAAATTGAGA+GGG | + | chr4.4:57379420-57379439 | None:intergenic | 40.0% | |
| GAAGCATGAACCTCTTAATG+AGG | - | chr4.4:57378465-57378484 | MS.gene046040:intron | 40.0% | |
| GATGCTGAAGAAGAAGAAGA+AGG | - | chr4.4:57376105-57376124 | MS.gene046040:CDS | 40.0% | |
| GCAGCACCATTCGTTAATAA+AGG | - | chr4.4:57378931-57378950 | MS.gene046040:intron | 40.0% | |
| GCGCAAAAAATGACAAAGAG+AGG | - | chr4.4:57378778-57378797 | MS.gene046040:intron | 40.0% | |
| GGGGATGCTTCTTAATAACA+TGG | - | chr4.4:57376499-57376518 | MS.gene046040:CDS | 40.0% | |
| GGGGTAAATGATCAAAATCC+TGG | - | chr4.4:57378799-57378818 | MS.gene046040:intron | 40.0% | |
| GTGTTACGATGCATATGGAA+GGG | - | chr4.4:57377303-57377322 | MS.gene046040:intron | 40.0% | |
| GTTGTGACCAATTTGGGTAA+GGG | - | chr4.4:57377359-57377378 | MS.gene046040:intron | 40.0% | |
| TAGTACTCAACAATTCTCCC+AGG | + | chr4.4:57377054-57377073 | None:intergenic | 40.0% | |
| TCTGAAAATGATGTTCCTGC+GGG | - | chr4.4:57378586-57378605 | MS.gene046040:intron | 40.0% | |
| TGAAATGGAATTCCTGGAAC+AGG | + | chr4.4:57379171-57379190 | None:intergenic | 40.0% | |
| TGAACCTGGATGAAATTGAG+AGG | + | chr4.4:57379421-57379440 | None:intergenic | 40.0% | |
| TGAGGATGTAGGTAAGGATT+TGG | + | chr4.4:57377986-57378005 | None:intergenic | 40.0% | |
| TGCTGAAGAAGAAGAAGAAG+GGG | - | chr4.4:57376107-57376126 | MS.gene046040:CDS | 40.0% | |
| TGCTGTTGAAATGGAATTCC+TGG | + | chr4.4:57379177-57379196 | None:intergenic | 40.0% | |
| TGTATCCCTTAACTGCAGTT+TGG | - | chr4.4:57376643-57376662 | MS.gene046040:CDS | 40.0% | |
| TGTGTTACGATGCATATGGA+AGG | - | chr4.4:57377302-57377321 | MS.gene046040:intron | 40.0% | |
| TGTTGTGACCAATTTGGGTA+AGG | - | chr4.4:57377358-57377377 | MS.gene046040:intron | 40.0% | |
| TTAATGAGGGTTCTGTTCTG+TGG | - | chr4.4:57378479-57378498 | MS.gene046040:intron | 40.0% | |
| TTGTGACATTCAATCATCGG+TGG | + | chr4.4:57377398-57377417 | None:intergenic | 40.0% | |
| ! | ACAGGTAGCATTTTATGGTG+TGG | + | chr4.4:57376927-57376946 | None:intergenic | 40.0% |
| ! | AGGTCTAGGATTTGTCCTAT+TGG | - | chr4.4:57376692-57376711 | MS.gene046040:CDS | 40.0% |
| ! | CAGTGCTCTACAATGTCTTT+TGG | - | chr4.4:57378256-57378275 | MS.gene046040:CDS | 40.0% |
| ! | GAGAGCTTTGGTTGTCATTT+AGG | - | chr4.4:57376730-57376749 | MS.gene046040:CDS | 40.0% |
| ! | GGGTGCAATTTCTAAAGACA+AGG | + | chr4.4:57377860-57377879 | None:intergenic | 40.0% |
| ! | TCATTTGCTGCAATGTCTTG+TGG | + | chr4.4:57377090-57377109 | None:intergenic | 40.0% |
| ! | TGGGTTAGATTGTGAGATGT+GGG | + | chr4.4:57378179-57378198 | None:intergenic | 40.0% |
| ! | TTCCGACCCGTTATTGTTTT+GGG | + | chr4.4:57375686-57375705 | None:intergenic | 40.0% |
| !! | AACCCAAAACAATAACGGGT+CGG | - | chr4.4:57375681-57375700 | MS.gene046040:CDS | 40.0% |
| !! | GAGTAACGGATAACCAACAT+TGG | + | chr4.4:57377816-57377835 | None:intergenic | 40.0% |
| !! | GTGGGTTAGATTGTGAAACA+TGG | - | chr4.4:57377128-57377147 | MS.gene046040:intron | 40.0% |
| !!! | CCTTTTGCTGTTTCCCTAAA+TGG | - | chr4.4:57377677-57377696 | MS.gene046040:intron | 40.0% |
| !!! | TACTTGGTGGCTTTGAGTTT+TGG | - | chr4.4:57376307-57376326 | MS.gene046040:CDS | 40.0% |
| AACAACCCATGTATGCACCT+GGG | - | chr4.4:57379265-57379284 | MS.gene046040:CDS | 45.0% | |
| AACACATGCTGTGATGCTAC+AGG | + | chr4.4:57378886-57378905 | None:intergenic | 45.0% | |
| AACCCCTCTCAATTTCATCC+AGG | - | chr4.4:57379414-57379433 | MS.gene046040:CDS | 45.0% | |
| AATATATTGGGCTGTACCCC+AGG | + | chr4.4:57379240-57379259 | None:intergenic | 45.0% | |
| AATGCATTTGGAGGCAGAGA+AGG | + | chr4.4:57379093-57379112 | None:intergenic | 45.0% | |
| ACAAACCCAGGTGCATACAT+GGG | + | chr4.4:57379273-57379292 | None:intergenic | 45.0% | |
| ACCCAAATGTAACGTTCGTG+TGG | + | chr4.4:57378199-57378218 | None:intergenic | 45.0% | |
| ACCCACACGAACGTTACATT+TGG | - | chr4.4:57378194-57378213 | MS.gene046040:intron | 45.0% | |
| ACCTGTGGGAGTTGTTATGT+CGG | - | chr4.4:57376941-57376960 | MS.gene046040:intron | 45.0% | |
| AGGAAAGGCTATGATGCATC+TGG | - | chr4.4:57378685-57378704 | MS.gene046040:intron | 45.0% | |
| AGGGATCTGGAAGGGAATAT+AGG | - | chr4.4:57377322-57377341 | MS.gene046040:intron | 45.0% | |
| AGTTGAGGTGAATGGGAATG+AGG | - | chr4.4:57375954-57375973 | MS.gene046040:CDS | 45.0% | |
| ATCGTCGTCTTCATCACTGT+CGG | + | chr4.4:57376079-57376098 | None:intergenic | 45.0% | |
| ATCTTTCAAGCGCAGCAACA+GGG | - | chr4.4:57379345-57379364 | MS.gene046040:CDS | 45.0% | |
| ATGTATGCACCTGGGTTTGT+GGG | - | chr4.4:57379273-57379292 | MS.gene046040:CDS | 45.0% | |
| CAGCAAATGAATCCCAGTCA+CGG | - | chr4.4:57379192-57379211 | MS.gene046040:intron | 45.0% | |
| CATATGGAAGGGATCTGGAA+GGG | - | chr4.4:57377314-57377333 | MS.gene046040:intron | 45.0% | |
| CATTCAACTACCAGTCGAAG+AGG | - | chr4.4:57377957-57377976 | MS.gene046040:intron | 45.0% | |
| CATTCAATCATCGGTGGAAG+AGG | + | chr4.4:57377392-57377411 | None:intergenic | 45.0% | |
| CATTCACCTCAACTGAAGGA+GGG | + | chr4.4:57375948-57375967 | None:intergenic | 45.0% | |
| CATTTCCCAACTATGATGCC+TGG | - | chr4.4:57379219-57379238 | MS.gene046040:intron | 45.0% | |
| CCCAAATGTAACGTTCGTGT+GGG | + | chr4.4:57378198-57378217 | None:intergenic | 45.0% | |
| CCCAACCAAACTGCAGTTAA+GGG | + | chr4.4:57376651-57376670 | None:intergenic | 45.0% | |
| CCCACACGAACGTTACATTT+GGG | - | chr4.4:57378195-57378214 | MS.gene046040:intron | 45.0% | |
| CCCTTAACTGCAGTTTGGTT+GGG | - | chr4.4:57376648-57376667 | MS.gene046040:CDS | 45.0% | |
| CCTTGTCCAATGCCTGAAAA+TGG | + | chr4.4:57378967-57378986 | None:intergenic | 45.0% | |
| CGTGGAAAGGATCACGTTAA+CGG | - | chr4.4:57375918-57375937 | MS.gene046040:CDS | 45.0% | |
| CGTTAACAACAACCCTGTTC+CGG | - | chr4.4:57375759-57375778 | MS.gene046040:CDS | 45.0% | |
| CGTTAACGTGATCCTTTCCA+CGG | + | chr4.4:57375920-57375939 | None:intergenic | 45.0% | |
| CTCCTTCAGTTGAGGTGAAT+GGG | - | chr4.4:57375947-57375966 | MS.gene046040:CDS | 45.0% | |
| CTGAAAATGATGTTCCTGCG+GGG | - | chr4.4:57378587-57378606 | MS.gene046040:intron | 45.0% | |
| GCAAGATCCAGAAGAACAGT+TGG | + | chr4.4:57377421-57377440 | None:intergenic | 45.0% | |
| GGAAGGATTGTTGTGGCATT+TGG | + | chr4.4:57379305-57379324 | None:intergenic | 45.0% | |
| GGAGGTAACACATGCTCTTT+CGG | + | chr4.4:57378856-57378875 | None:intergenic | 45.0% | |
| GGCTAAACCCTTACCCAAAT+TGG | + | chr4.4:57377369-57377388 | None:intergenic | 45.0% | |
| GTCACAACCAACTGTTCTTC+TGG | - | chr4.4:57377411-57377430 | MS.gene046040:intron | 45.0% | |
| GTGGAAAGGATCACGTTAAC+GGG | - | chr4.4:57375919-57375938 | MS.gene046040:CDS | 45.0% | |
| TAACTGCAGTTTGGTTGGGA+TGG | - | chr4.4:57376652-57376671 | MS.gene046040:CDS | 45.0% | |
| TAGGTGGTTGCTGAATCTGT+TGG | + | chr4.4:57379326-57379345 | None:intergenic | 45.0% | |
| TATCTTTCAAGCGCAGCAAC+AGG | - | chr4.4:57379344-57379363 | MS.gene046040:CDS | 45.0% | |
| TCAAGTCATTGTGGAAGGAG+TGG | - | chr4.4:57378441-57378460 | MS.gene046040:intron | 45.0% | |
| TCATTCGCTGCAATGTCTTG+TGG | - | chr4.4:57378219-57378238 | MS.gene046040:intron | 45.0% | |
| TCCCAACCAAACTGCAGTTA+AGG | + | chr4.4:57376652-57376671 | None:intergenic | 45.0% | |
| TCCCTTAACTGCAGTTTGGT+TGG | - | chr4.4:57376647-57376666 | MS.gene046040:CDS | 45.0% | |
| TCTCATCAGTTTCCTGTTCC+AGG | - | chr4.4:57379156-57379175 | MS.gene046040:intron | 45.0% | |
| TGGTTGCTGAATCTGTTGGA+AGG | + | chr4.4:57379322-57379341 | None:intergenic | 45.0% | |
| TGGTTGTGAGGATGTAGGTA+AGG | + | chr4.4:57377992-57378011 | None:intergenic | 45.0% | |
| TGTAACTTGAGGGTGACAAG+AGG | - | chr4.4:57377506-57377525 | MS.gene046040:intron | 45.0% | |
| TGTGATGCTACAGGTGCATT+AGG | + | chr4.4:57378877-57378896 | None:intergenic | 45.0% | |
| TGTTGCTGCGCTTGAAAGAT+AGG | + | chr4.4:57379345-57379364 | None:intergenic | 45.0% | |
| TTCAACTACCAGTCGAAGAG+GGG | - | chr4.4:57377959-57377978 | MS.gene046040:intron | 45.0% | |
| TTCAATCATCGGTGGAAGAG+GGG | + | chr4.4:57377390-57377409 | None:intergenic | 45.0% | |
| TTCCCATTCACCTCAACTGA+AGG | + | chr4.4:57375952-57375971 | None:intergenic | 45.0% | |
| TTTCCCAACTATGATGCCTG+GGG | - | chr4.4:57379221-57379240 | MS.gene046040:intron | 45.0% | |
| ! | ATAGGGTGTTCCCAATCAAC+TGG | + | chr4.4:57378305-57378324 | None:intergenic | 45.0% |
| ! | CTCCCACAGGTAGCATTTTA+TGG | + | chr4.4:57376932-57376951 | None:intergenic | 45.0% |
| ! | GAAGATGGTTAGTTGGAGTG+CGG | - | chr4.4:57376146-57376165 | MS.gene046040:CDS | 45.0% |
| ! | GTTCCGACCCGTTATTGTTT+TGG | + | chr4.4:57375687-57375706 | None:intergenic | 45.0% |
| !! | ACCCGAAGTACCAAGCTTTT+CGG | + | chr4.4:57375875-57375894 | None:intergenic | 45.0% |
| !! | GAAGTGTTGAAGTGACCATG+CGG | - | chr4.4:57377555-57377574 | MS.gene046040:intron | 45.0% |
| !! | GTGGGTTAGATTGTGAGATG+TGG | + | chr4.4:57378180-57378199 | None:intergenic | 45.0% |
| !! | TTGCTAAGCTTTTCAGGCTG+TGG | + | chr4.4:57375799-57375818 | None:intergenic | 45.0% |
| !!! | CCATTTTCAGGCATTGGACA+AGG | - | chr4.4:57378964-57378983 | MS.gene046040:intron | 45.0% |
| !!! | TTTTCAGGCATTGGACAAGG+TGG | - | chr4.4:57378967-57378986 | MS.gene046040:intron | 45.0% |
| ACCGACATAACAACTCCCAC+AGG | + | chr4.4:57376945-57376964 | None:intergenic | 50.0% | |
| ACCTGACCCGAACGTTGTTA+CGG | - | chr4.4:57375705-57375724 | MS.gene046040:CDS | 50.0% | |
| ACTGAAAGCCGCAAACCACT+AGG | - | chr4.4:57378505-57378524 | MS.gene046040:intron | 50.0% | |
| AGACCAAAGTTGTTCCCCCT+TGG | + | chr4.4:57378615-57378634 | None:intergenic | 50.0% | |
| CAACAACCCATGTATGCACC+TGG | - | chr4.4:57379264-57379283 | MS.gene046040:CDS | 50.0% | |
| CACAAACCCAGGTGCATACA+TGG | + | chr4.4:57379274-57379293 | None:intergenic | 50.0% | |
| CAGCGTCCTAGTCCTATTTC+TGG | - | chr4.4:57379390-57379409 | MS.gene046040:CDS | 50.0% | |
| CAGGTTCATCAGGTAGTCGA+GGG | - | chr4.4:57379433-57379452 | MS.gene046040:CDS | 50.0% | |
| CATGTATGCACCTGGGTTTG+TGG | - | chr4.4:57379272-57379291 | MS.gene046040:CDS | 50.0% | |
| CCATTCACCTCAACTGAAGG+AGG | + | chr4.4:57375949-57375968 | None:intergenic | 50.0% | |
| CCTCCTTCAGTTGAGGTGAA+TGG | - | chr4.4:57375946-57375965 | MS.gene046040:CDS | 50.0% | |
| CGATGCATATGGAAGGGATC+TGG | - | chr4.4:57377309-57377328 | MS.gene046040:intron | 50.0% | |
| GATCCAAGGGGGAACAACTT+TGG | - | chr4.4:57378609-57378628 | MS.gene046040:intron | 50.0% | |
| GATGCTACAGGTGCATTAGG+AGG | + | chr4.4:57378874-57378893 | None:intergenic | 50.0% | |
| GCATATGGAAGGGATCTGGA+AGG | - | chr4.4:57377313-57377332 | MS.gene046040:intron | 50.0% | |
| GCCGAAAAGCTTGGTACTTC+GGG | - | chr4.4:57375871-57375890 | MS.gene046040:CDS | 50.0% | |
| GCTAAACACACATCCACTGG+AGG | + | chr4.4:57376903-57376922 | None:intergenic | 50.0% | |
| GGAGCTCAAGTCATTGTGGA+AGG | - | chr4.4:57378436-57378455 | MS.gene046040:intron | 50.0% | |
| GGCCGAAAAGCTTGGTACTT+CGG | - | chr4.4:57375870-57375889 | MS.gene046040:CDS | 50.0% | |
| GGGAAATGAGTTCCGTGACT+GGG | + | chr4.4:57379207-57379226 | None:intergenic | 50.0% | |
| GGGTTGCCAGAAATAGGACT+AGG | + | chr4.4:57379399-57379418 | None:intergenic | 50.0% | |
| GGTGCTAAACACACATCCAC+TGG | + | chr4.4:57376906-57376925 | None:intergenic | 50.0% | |
| GTACCCCAGGCATCATAGTT+GGG | + | chr4.4:57379227-57379246 | None:intergenic | 50.0% | |
| TAACAACAACCCTGTTCCGG+CGG | - | chr4.4:57375762-57375781 | MS.gene046040:CDS | 50.0% | |
| TCAACTACCAGTCGAAGAGG+GGG | - | chr4.4:57377960-57377979 | MS.gene046040:intron | 50.0% | |
| TCAAGAACTCAACCTCCGCA+TGG | + | chr4.4:57377573-57377592 | None:intergenic | 50.0% | |
| TCTCGGAGCTCAAGTCATTG+TGG | - | chr4.4:57378432-57378451 | MS.gene046040:intron | 50.0% | |
| TCTTCATCATCGTCGACGTC+TGG | - | chr4.4:57376051-57376070 | MS.gene046040:CDS | 50.0% | |
| TGAGAGGGGTTGCCAGAAAT+AGG | + | chr4.4:57379405-57379424 | None:intergenic | 50.0% | |
| TGCTGCGCTTGAAAGATAGG+TGG | + | chr4.4:57379342-57379361 | None:intergenic | 50.0% | |
| TGGGAAATGAGTTCCGTGAC+TGG | + | chr4.4:57379208-57379227 | None:intergenic | 50.0% | |
| TGTACCCCAGGCATCATAGT+TGG | + | chr4.4:57379228-57379247 | None:intergenic | 50.0% | |
| TTTGGAGGCAGAGAAGGTTG+TGG | + | chr4.4:57379087-57379106 | None:intergenic | 50.0% | |
| ! | ACTTGACCCGAACCCTTTTG+CGG | - | chr4.4:57375834-57375853 | MS.gene046040:CDS | 50.0% |
| !! | AGACATTGTAGAGCACTGGC+AGG | + | chr4.4:57378254-57378273 | None:intergenic | 50.0% |
| !! | AGCTTTTCAGGCTGTGGCTT+AGG | + | chr4.4:57375793-57375812 | None:intergenic | 50.0% |
| !! | TTAACGAATGGTGCTGCTGC+AGG | + | chr4.4:57378928-57378947 | None:intergenic | 50.0% |
| !!! | TGGTTTTGACCCACAAACCC+AGG | + | chr4.4:57379285-57379304 | None:intergenic | 50.0% |
| ACATCCACTGGAGGAACTGG+AGG | + | chr4.4:57376894-57376913 | None:intergenic | 55.0% | |
| AGAGAAGGTTGTGGCTGCTG+TGG | + | chr4.4:57379078-57379097 | None:intergenic | 55.0% | |
| AGGACGCTGCTGCAATTCAG+AGG | + | chr4.4:57379379-57379398 | None:intergenic | 55.0% | |
| ATGTTCCTGCGGGGATCCAA+GGG | - | chr4.4:57378596-57378615 | MS.gene046040:intron | 55.0% | |
| CACACATCCACTGGAGGAAC+TGG | + | chr4.4:57376897-57376916 | None:intergenic | 55.0% | |
| CCAGGTTCATCAGGTAGTCG+AGG | - | chr4.4:57379432-57379451 | MS.gene046040:CDS | 55.0% | |
| CCGCTGGCACCATGAAATGA+CGG | + | chr4.4:57379462-57379481 | None:intergenic | 55.0% | |
| CCTCGACTACCTGATGAACC+TGG | + | chr4.4:57379435-57379454 | None:intergenic | 55.0% | |
| CGAGGGAGACCGTCATTTCA+TGG | - | chr4.4:57379450-57379469 | MS.gene046040:CDS | 55.0% | |
| GGACGCTGCTGCAATTCAGA+GGG | + | chr4.4:57379378-57379397 | None:intergenic | 55.0% | |
| GGGTTGAAGTGATCATGCGG+AGG | + | chr4.4:57377718-57377737 | None:intergenic | 55.0% | |
| GTCTCCGCCGTAACAACGTT+CGG | + | chr4.4:57375715-57375734 | None:intergenic | 55.0% | |
| GTGTTGAAGTGACCATGCGG+AGG | - | chr4.4:57377558-57377577 | MS.gene046040:intron | 55.0% | |
| GTTAGTTGGAGTGCGGCTGA+TGG | - | chr4.4:57376153-57376172 | MS.gene046040:CDS | 55.0% | |
| TCTCCGCCGTAACAACGTTC+GGG | + | chr4.4:57375714-57375733 | None:intergenic | 55.0% | |
| TGACCCGAACGTTGTTACGG+CGG | - | chr4.4:57375708-57375727 | MS.gene046040:CDS | 55.0% | |
| TTTGCCTCCAGTTCCTCCAG+TGG | - | chr4.4:57376887-57376906 | MS.gene046040:intron | 55.0% | |
| ! | CCGTCATTTCATGGTGCCAG+CGG | - | chr4.4:57379459-57379478 | MS.gene046040:CDS | 55.0% |
| ! | CGTCATTTCATGGTGCCAGC+GGG | - | chr4.4:57379460-57379479 | MS.gene046040:CDS | 55.0% |
| ! | GTACCAAGCTTTTCGGCCAC+CGG | + | chr4.4:57375868-57375887 | None:intergenic | 55.0% |
| ACACCGGTGGCCGAAAAGCT+TGG | - | chr4.4:57375862-57375881 | MS.gene046040:CDS | 60.0% | |
| CGCTGCTGCAATTCAGAGGG+TGG | + | chr4.4:57379375-57379394 | None:intergenic | 60.0% | |
| CGTTGTTACGGCGGAGACAC+CGG | - | chr4.4:57375717-57375736 | MS.gene046040:CDS | 60.0% | |
| GATGTTCCTGCGGGGATCCA+AGG | - | chr4.4:57378595-57378614 | MS.gene046040:intron | 60.0% | |
| GATTTGGCCCCCTCTTCGAC+TGG | + | chr4.4:57377970-57377989 | None:intergenic | 60.0% | |
| GCAGGTGCGTTAGGGACGTT+AGG | + | chr4.4:57378910-57378929 | None:intergenic | 60.0% | |
| GCCGTAACAACGTTCGGGTC+AGG | + | chr4.4:57375709-57375728 | None:intergenic | 60.0% | |
| GGAGAGGATGGCGACCTTCA+AGG | - | chr4.4:57379481-57379500 | MS.gene046040:CDS | 60.0% | |
| GGGTGACCCTCCTTCAGTTG+AGG | - | chr4.4:57375939-57375958 | MS.gene046040:CDS | 60.0% | |
| GTCTCCGCCGCAAAAGGGTT+CGG | + | chr4.4:57375844-57375863 | None:intergenic | 60.0% | |
| TAGGTGTCTCCGCCGGAACA+GGG | + | chr4.4:57375774-57375793 | None:intergenic | 60.0% | |
| TCTCCGCCGCAAAAGGGTTC+GGG | + | chr4.4:57375843-57375862 | None:intergenic | 60.0% | |
| TGTGGCTTAGGTGTCTCCGC+CGG | + | chr4.4:57375781-57375800 | None:intergenic | 60.0% | |
| TGTTCCTGCGGGGATCCAAG+GGG | - | chr4.4:57378597-57378616 | MS.gene046040:intron | 60.0% | |
| TTAGGTGTCTCCGCCGGAAC+AGG | + | chr4.4:57375775-57375794 | None:intergenic | 60.0% | |
| ! | GTGCTGCTGCAGGTGCGTTA+GGG | + | chr4.4:57378918-57378937 | None:intergenic | 60.0% |
| ! | TGACCCGAACCCTTTTGCGG+CGG | - | chr4.4:57375837-57375856 | MS.gene046040:CDS | 60.0% |
| ! | TTTCATGGTGCCAGCGGGAG+AGG | - | chr4.4:57379465-57379484 | MS.gene046040:CDS | 60.0% |
| ACCGGTGTCTCCGCCGCAAA+AGG | + | chr4.4:57375850-57375869 | None:intergenic | 65.0% | |
| CCGGTGTCTCCGCCGCAAAA+GGG | + | chr4.4:57375849-57375868 | None:intergenic | 65.0% | |
| GTTCCTGCGGGGATCCAAGG+GGG | - | chr4.4:57378598-57378617 | MS.gene046040:intron | 65.0% | |
| ! | ATGGTGCCAGCGGGAGAGGA+TGG | - | chr4.4:57379469-57379488 | MS.gene046040:CDS | 65.0% |
| ! | CCCTTTTGCGGCGGAGACAC+CGG | - | chr4.4:57375846-57375865 | MS.gene046040:CDS | 65.0% |
| ! | TTTTGCGGCGGAGACACCGG+TGG | - | chr4.4:57375849-57375868 | MS.gene046040:CDS | 65.0% |
| !! | GGTGCTGCTGCAGGTGCGTT+AGG | + | chr4.4:57378919-57378938 | None:intergenic | 65.0% |
| AGGTCGCCATCCTCTCCCGC+TGG | + | chr4.4:57379478-57379497 | None:intergenic | 70.0% | |
| GTTCCCCCTTGGATCCCCGC+AGG | + | chr4.4:57378604-57378623 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 57375676 | 57379506 | 57375676 | ID=MS.gene046040 |
| chr4.4 | mRNA | 57375676 | 57379506 | 57375676 | ID=MS.gene046040.t1;Parent=MS.gene046040 |
| chr4.4 | exon | 57379222 | 57379506 | 57379222 | ID=MS.gene046040.t1.exon1;Parent=MS.gene046040.t1 |
| chr4.4 | CDS | 57379222 | 57379506 | 57379222 | ID=cds.MS.gene046040.t1;Parent=MS.gene046040.t1 |
| chr4.4 | exon | 57378220 | 57378297 | 57378220 | ID=MS.gene046040.t1.exon2;Parent=MS.gene046040.t1 |
| chr4.4 | CDS | 57378220 | 57378297 | 57378220 | ID=cds.MS.gene046040.t1;Parent=MS.gene046040.t1 |
| chr4.4 | exon | 57375676 | 57376752 | 57375676 | ID=MS.gene046040.t1.exon3;Parent=MS.gene046040.t1 |
| chr4.4 | CDS | 57375676 | 57376752 | 57375676 | ID=cds.MS.gene046040.t1;Parent=MS.gene046040.t1 |
| Gene Sequence |
| Protein sequence |
