Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95758.t1 | XP_013442872.1 | 85.8 | 571 | 77 | 2 | 1 | 571 | 1 | 567 | 1.20E-219 | 772.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95758.t1 | Q3UMQ8 | 32.8 | 195 | 115 | 7 | 178 | 357 | 163 | 356 | 8.8e-14 | 80.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95758.t1 | G7ZX23 | 85.8 | 571 | 77 | 2 | 1 | 571 | 1 | 567 | 8.6e-220 | 772.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95758.t1 | MTR_0072s0050 | 92.995 | 571 | 36 | 2 | 1 | 571 | 1 | 567 | 0.0 | 884 |
| MS.gene95758.t1 | MTR_2g090095 | 41.717 | 501 | 232 | 16 | 87 | 560 | 63 | 530 | 1.54e-93 | 299 |
| MS.gene95758.t1 | MTR_2g090095 | 44.792 | 384 | 157 | 13 | 204 | 560 | 1 | 356 | 3.04e-78 | 254 |
| MS.gene95758.t1 | MTR_7g116780 | 35.971 | 139 | 73 | 2 | 228 | 366 | 5 | 127 | 6.19e-17 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95758.t1 | AT1G03530 | 55.274 | 237 | 80 | 5 | 140 | 351 | 293 | 528 | 1.66e-68 | 236 |
Find 165 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCGGTGTCTCCGCCGAAAA+AGG | 0.169527 | 4.1:+53857971 | None:intergenic |
| GTGGCTGCTGCAGGTGCATT+AGG | 0.192930 | 4.1:+53854943 | None:intergenic |
| ATCTCATTCTTTGACTTAAT+TGG | 0.194631 | 4.1:+53857611 | None:intergenic |
| GTTCCGACCCGTTGTTGTTT+TGG | 0.221291 | 4.1:+53858134 | None:intergenic |
| CTTTCCACTGATTTCTCAAT+AGG | 0.264015 | 4.1:+53857914 | None:intergenic |
| AGCACATGTTCAGCAAATTC+TGG | 0.272472 | 4.1:+53855216 | None:intergenic |
| CAGCGTCCTAGTCCTATTTC+TGG | 0.273259 | 4.1:-53854466 | MS.gene95758:CDS |
| TGCTGTTGAAATGGAATTCC+TGG | 0.277475 | 4.1:+53854682 | None:intergenic |
| TCTCATCAGTTTCCTGTTCC+AGG | 0.277521 | 4.1:-53854700 | MS.gene95758:CDS |
| TCGTCATCATCGTCGACGTC+TGG | 0.287420 | 4.1:-53857767 | MS.gene95758:CDS |
| GGTTTAGTTGATGAAATCTT+TGG | 0.291789 | 4.1:-53855333 | MS.gene95758:CDS |
| TTAGGTGTCTCTGCCGCAAC+AGG | 0.297151 | 4.1:+53858046 | None:intergenic |
| AAGTTAGGACCTGCATTTAA+AGG | 0.297546 | 4.1:+53854841 | None:intergenic |
| ATTGAATTTGCAGCAAAGTT+AGG | 0.318590 | 4.1:+53854826 | None:intergenic |
| TAAGTCAAAGAATGAGATTC+AGG | 0.320696 | 4.1:-53857606 | MS.gene95758:intron |
| GCCACATCATTCGTTAATAA+AGG | 0.334570 | 4.1:-53854925 | MS.gene95758:CDS |
| GCCGAAAAGCTTGGTACTTC+GGG | 0.336858 | 4.1:-53857947 | MS.gene95758:CDS |
| TGTTGCTGCGCTTGAAAGAT+AGG | 0.339681 | 4.1:+53854514 | None:intergenic |
| TGGCTGCTGCAGGTGCATTA+GGG | 0.340878 | 4.1:+53854944 | None:intergenic |
| GGGTTGTTGTGAAAATATAT+TGG | 0.347751 | 4.1:+53854606 | None:intergenic |
| TCAATAGTAAGGATCTTTAC+AGG | 0.352711 | 4.1:-53855194 | MS.gene95758:CDS |
| CCTTGTCCAATACCTGAAAA+AGG | 0.360418 | 4.1:+53854892 | None:intergenic |
| GGAAGGATTGTTGTGGCATC+TGG | 0.363969 | 4.1:+53854554 | None:intergenic |
| GTCTCCGCCGTAACAAGGTT+CGG | 0.365379 | 4.1:+53858106 | None:intergenic |
| GGCTGTGGCTGCTGTGGAAA+TGG | 0.369991 | 4.1:+53854787 | None:intergenic |
| GCATTTGAAGGAAATGCATT+TGG | 0.370357 | 4.1:+53854754 | None:intergenic |
| TATCTTTCAAGCGCAGCAAC+AGG | 0.370424 | 4.1:-53854512 | MS.gene95758:CDS |
| CACACATCCACTGGAGGAAC+TGG | 0.373095 | 4.1:+53856958 | None:intergenic |
| CTCCTTCAATTGAGGTGAAT+GGG | 0.375047 | 4.1:-53857871 | MS.gene95758:CDS |
| TGAGAGGGGTTGCCAGAAAT+AGG | 0.376962 | 4.1:+53854454 | None:intergenic |
| CAATTTCATCCTGGTTCATC+AGG | 0.378170 | 4.1:-53854433 | MS.gene95758:CDS |
| CACGAACCCTGGTGCATACA+TGG | 0.387622 | 4.1:+53854585 | None:intergenic |
| GGAGGTAACACATGCTCTTT+CGG | 0.393457 | 4.1:+53855006 | None:intergenic |
| GGATTCATTTGCTGTTGAAA+TGG | 0.402802 | 4.1:+53854673 | None:intergenic |
| TTGTATCTCACAACATAATA+CGG | 0.411728 | 4.1:+53855297 | None:intergenic |
| TTTCGTGGTGCCGGCGGGAG+AGG | 0.418668 | 4.1:-53854391 | MS.gene95758:CDS |
| GGTTGTTGTGAAAATATATT+GGG | 0.420648 | 4.1:+53854607 | None:intergenic |
| GGCCGAAAAGCTTGGTACTT+CGG | 0.424127 | 4.1:-53857948 | MS.gene95758:CDS |
| TCATTTCAATGTCACCTTGA+AGG | 0.425382 | 4.1:+53854361 | None:intergenic |
| AAGGAAATGCATTTGGAGGC+AGG | 0.435735 | 4.1:+53854761 | None:intergenic |
| TCTCCGCCGTAACAAGGTTC+GGG | 0.444284 | 4.1:+53858107 | None:intergenic |
| TGGAAACCCAAAACAACAAC+GGG | 0.446205 | 4.1:-53858141 | MS.gene95758:CDS |
| TGAAATGGAATTCCTGGAAC+AGG | 0.448959 | 4.1:+53854688 | None:intergenic |
| CCTGCATTTAAAGGTTGAAA+AGG | 0.454155 | 4.1:+53854850 | None:intergenic |
| GATGTTCCTGCGGGGATCCA+AGG | 0.456245 | 4.1:-53855264 | MS.gene95758:CDS |
| CGTCATCATCGTCGACGTCT+GGG | 0.456745 | 4.1:-53857766 | MS.gene95758:CDS |
| GGAGAGGATGGCGACCTTCA+AGG | 0.458321 | 4.1:-53854375 | MS.gene95758:CDS |
| CAACTAAACCTAGTGGTTTG+CGG | 0.462976 | 4.1:+53855346 | None:intergenic |
| GATAAGTGATGATGAGAAGA+TGG | 0.464299 | 4.1:-53857690 | MS.gene95758:CDS |
| TCCCCATTCACCTCAATTGA+AGG | 0.464497 | 4.1:+53857869 | None:intergenic |
| CCTCCTTCAATTGAGGTGAA+TGG | 0.466670 | 4.1:-53857872 | MS.gene95758:CDS |
| ATGATGAGAAGATGGTTAGT+TGG | 0.469112 | 4.1:-53857682 | MS.gene95758:CDS |
| AATATATTGGGCTGTACCCC+AGG | 0.469285 | 4.1:+53854619 | None:intergenic |
| AAAAGCTTAGCAACAACAAC+GGG | 0.470692 | 4.1:-53858012 | MS.gene95758:CDS |
| CATTTCCCAACTATGATGCC+TGG | 0.471966 | 4.1:-53854637 | MS.gene95758:CDS |
| GTGGTGCCGGCGGGAGAGGA+TGG | 0.474367 | 4.1:-53854387 | MS.gene95758:CDS |
| AGAACAGAACCCTCATTAAG+AGG | 0.475235 | 4.1:+53855384 | None:intergenic |
| TGTACCCCAGGCATCATAGT+TGG | 0.475387 | 4.1:+53854631 | None:intergenic |
| ATGAGAAAGAGGCTGAATAC+AGG | 0.476574 | 4.1:-53855107 | MS.gene95758:CDS |
| TGAACATGTGCTCAATAGTA+AGG | 0.479283 | 4.1:-53855205 | MS.gene95758:CDS |
| AACCCCTCTCAATTTCATCC+TGG | 0.481613 | 4.1:-53854442 | MS.gene95758:CDS |
| TGTGGTGCTACAGGTGCATT+AGG | 0.482360 | 4.1:+53854985 | None:intergenic |
| GTGGAAAGGATCACGTTAAC+GGG | 0.488457 | 4.1:-53857899 | MS.gene95758:CDS |
| ATGTTCCTGCGGGGATCCAA+GGG | 0.491170 | 4.1:-53855263 | MS.gene95758:CDS |
| AGTGGAAAGGATCACGTTAA+CGG | 0.491424 | 4.1:-53857900 | MS.gene95758:CDS |
| GTTGCTGCGCTTGAAAGATA+GGG | 0.492823 | 4.1:+53854515 | None:intergenic |
| AGGAAAGGCTATGATGCATC+TGG | 0.493922 | 4.1:-53855174 | MS.gene95758:CDS |
| GTACCCCAGGCATCATAGTT+GGG | 0.495295 | 4.1:+53854632 | None:intergenic |
| TAATATGACATGGCATTTGA+AGG | 0.495859 | 4.1:+53854742 | None:intergenic |
| GCCGTAACAAGGTTCGGGTC+AGG | 0.496045 | 4.1:+53858112 | None:intergenic |
| CATGTATGCACCAGGGTTCG+TGG | 0.497858 | 4.1:-53854584 | MS.gene95758:CDS |
| TTTGGAGGCAGGGAAGGCTG+TGG | 0.498365 | 4.1:+53854772 | None:intergenic |
| TGGGAAATGAGTTCCGTGAC+TGG | 0.498859 | 4.1:+53854651 | None:intergenic |
| CCGGTGTCTCCGCCGTAACA+AGG | 0.502917 | 4.1:+53858101 | None:intergenic |
| GGGGTAAATGATCAAAATCC+TGG | 0.504975 | 4.1:-53855060 | MS.gene95758:CDS |
| ATTTCCCAACTATGATGCCT+GGG | 0.507129 | 4.1:-53854636 | MS.gene95758:CDS |
| GGGGATGAGGATAAAGATGA+TGG | 0.507952 | 4.1:-53857851 | MS.gene95758:CDS |
| ACCTGACCCGAACCTTGTTA+CGG | 0.508969 | 4.1:-53858113 | MS.gene95758:CDS |
| AGTTGATGAAATCTTTGGAC+CGG | 0.513400 | 4.1:-53855328 | MS.gene95758:CDS |
| CAACAACCCATGTATGCACC+AGG | 0.516417 | 4.1:-53854592 | MS.gene95758:CDS |
| CCGCCGGCACCACGAAATGA+TGG | 0.518509 | 4.1:+53854397 | None:intergenic |
| ACGAATGATGTGGCTGCTGC+AGG | 0.520533 | 4.1:+53854934 | None:intergenic |
| TCTGAAAATGATGTTCCTGC+GGG | 0.528260 | 4.1:-53855273 | MS.gene95758:CDS |
| TTTGAAGGAAATGCATTTGG+AGG | 0.531200 | 4.1:+53854757 | None:intergenic |
| ACACCGGTGGCCGAAAAGCT+TGG | 0.531813 | 4.1:-53857956 | MS.gene95758:CDS |
| AACACATGATGTGGTGCTAC+AGG | 0.534154 | 4.1:+53854976 | None:intergenic |
| AGACCATCATTTCGTGGTGC+CGG | 0.534816 | 4.1:-53854400 | MS.gene95758:CDS |
| TTTCTTCTTTAACAGACTCT+CGG | 0.534882 | 4.1:-53855444 | MS.gene95758:intron |
| CCATCATTTCGTGGTGCCGG+CGG | 0.541172 | 4.1:-53854397 | MS.gene95758:CDS |
| AATTGAGGTGAATGGGGATG+AGG | 0.542013 | 4.1:-53857864 | MS.gene95758:CDS |
| AGGGAAGGCTGTGGCTGCTG+TGG | 0.542103 | 4.1:+53854781 | None:intergenic |
| CCTTGTTACGGCGGAGACAC+CGG | 0.542140 | 4.1:-53858101 | MS.gene95758:CDS |
| GGCTGCTGCAGGTGCATTAG+GGG | 0.542480 | 4.1:+53854945 | None:intergenic |
| GATGATGAAGATGTTGTAGT+AGG | 0.545558 | 4.1:-53857635 | MS.gene95758:CDS |
| GGGAAATGAGTTCCGTGACT+GGG | 0.545756 | 4.1:+53854652 | None:intergenic |
| TGCTGCAGGTGCATTAGGGG+CGG | 0.548456 | 4.1:+53854948 | None:intergenic |
| CATCATTTCGTGGTGCCGGC+GGG | 0.548812 | 4.1:-53854396 | MS.gene95758:CDS |
| TCCTTTATTAACGAATGATG+TGG | 0.549956 | 4.1:+53854924 | None:intergenic |
| AATGCATTTGGAGGCAGGGA+AGG | 0.550709 | 4.1:+53854766 | None:intergenic |
| TTAATGAGGGTTCTGTTCTG+TGG | 0.552326 | 4.1:-53855380 | MS.gene95758:CDS |
| GAAGCATGAACCTCTTAATG+AGG | 0.553949 | 4.1:-53855394 | MS.gene95758:CDS |
| TTGCTGCGCTTGAAAGATAG+GGG | 0.560367 | 4.1:+53854516 | None:intergenic |
| GGTGCTAAACACACATCCAC+TGG | 0.561774 | 4.1:+53856949 | None:intergenic |
| CGAGGGAGACCATCATTTCG+TGG | 0.561884 | 4.1:-53854406 | MS.gene95758:CDS |
| CGCTGCTGCAATTCAGTGGG+TGG | 0.563508 | 4.1:+53854484 | None:intergenic |
| TGTATCTCACAACATAATAC+GGG | 0.565567 | 4.1:+53855298 | None:intergenic |
| AGTAAGGATCTTTACAGGAA+AGG | 0.565790 | 4.1:-53855189 | MS.gene95758:CDS |
| TTTGCTTCCAGTTCCTCCAG+TGG | 0.566718 | 4.1:-53856965 | MS.gene95758:CDS |
| AGGAAATGCATTTGGAGGCA+GGG | 0.573403 | 4.1:+53854762 | None:intergenic |
| GATGCTGAAGAAGAAGAAGA+AGG | 0.579369 | 4.1:-53857716 | MS.gene95758:CDS |
| TTCTGAAAATGATGTTCCTG+CGG | 0.582447 | 4.1:-53855274 | MS.gene95758:CDS |
| GGGTGACCCTCCTTCAATTG+AGG | 0.583310 | 4.1:-53857879 | MS.gene95758:CDS |
| ACTGAAAGCCGCAAACCACT+AGG | 0.586696 | 4.1:-53855354 | MS.gene95758:CDS |
| ATCTTTCAAGCGCAGCAACA+GGG | 0.588952 | 4.1:-53854511 | MS.gene95758:CDS |
| CCTGGTTCATCAGGTAGTCG+AGG | 0.589472 | 4.1:-53854424 | MS.gene95758:CDS |
| TCCTTCAATTGAGGTGAATG+GGG | 0.594580 | 4.1:-53857870 | MS.gene95758:CDS |
| GCAGGTGCATTAGGGGCGGT+AGG | 0.596228 | 4.1:+53854952 | None:intergenic |
| AGGACGCTGCTGCAATTCAG+TGG | 0.597169 | 4.1:+53854480 | None:intergenic |
| GAACCAGGATGAAATTGAGA+GGG | 0.598532 | 4.1:+53854439 | None:intergenic |
| GGGTTGCCAGAAATAGGACT+AGG | 0.599568 | 4.1:+53854460 | None:intergenic |
| CCTCGACTACCTGATGAACC+AGG | 0.599976 | 4.1:+53854424 | None:intergenic |
| GTTAGTTGGAGTGCGGCTGA+TGG | 0.600500 | 4.1:-53857668 | MS.gene95758:CDS |
| CCATTCACCTCAATTGAAGG+AGG | 0.603996 | 4.1:+53857872 | None:intergenic |
| GATAAAGATGATGGAAGTGA+AGG | 0.608280 | 4.1:-53857842 | MS.gene95758:CDS |
| TCTCGGAGCTCAAGTCATTG+TGG | 0.608772 | 4.1:-53855427 | MS.gene95758:CDS |
| GGAGCTCAAGTCATTGTGGA+AGG | 0.615668 | 4.1:-53855423 | MS.gene95758:CDS |
| GGACGCTGCTGCAATTCAGT+GGG | 0.619165 | 4.1:+53854481 | None:intergenic |
| TAGGTGTCTCTGCCGCAACA+GGG | 0.619305 | 4.1:+53858047 | None:intergenic |
| CTGGTTCATCAGGTAGTCGA+GGG | 0.619589 | 4.1:-53854423 | MS.gene95758:CDS |
| GGGTTGCTGAATCTGTTGGA+AGG | 0.619676 | 4.1:+53854537 | None:intergenic |
| ACGAACCCTGGTGCATACAT+GGG | 0.620882 | 4.1:+53854586 | None:intergenic |
| ATGTATGCACCAGGGTTCGT+GGG | 0.622661 | 4.1:-53854583 | MS.gene95758:CDS |
| CACCATAAAATGCTACCTGT+GGG | 0.623469 | 4.1:-53856925 | MS.gene95758:CDS |
| GCGGTAGGAAACACATGATG+TGG | 0.625398 | 4.1:+53854967 | None:intergenic |
| AACCCAAAACAACAACGGGT+CGG | 0.625847 | 4.1:-53858137 | MS.gene95758:CDS |
| ATCTGTTGGAAGGATTGTTG+TGG | 0.627519 | 4.1:+53854547 | None:intergenic |
| TCAAGTCATTGTGGAAGGAG+TGG | 0.631477 | 4.1:-53855418 | MS.gene95758:CDS |
| ATTTCATCAACTAAACCTAG+TGG | 0.632993 | 4.1:+53855339 | None:intergenic |
| ACCGACATAACAACTCCCAC+AGG | 0.634585 | 4.1:+53856910 | None:intergenic |
| ATGGAAACCCAAAACAACAA+CGG | 0.634738 | 4.1:-53858142 | MS.gene95758:CDS |
| ACACCATAAAATGCTACCTG+TGG | 0.634996 | 4.1:-53856926 | MS.gene95758:CDS |
| CGTTAACGACAACCCTGTTG+CGG | 0.635619 | 4.1:-53858059 | MS.gene95758:CDS |
| AGGTCGCCATCCTCTCCCGC+CGG | 0.637410 | 4.1:+53854381 | None:intergenic |
| GGTGCTACAGGTGCATTAGG+AGG | 0.638012 | 4.1:+53854988 | None:intergenic |
| TGAACCAGGATGAAATTGAG+AGG | 0.638944 | 4.1:+53854438 | None:intergenic |
| CTATTGAGAAATCAGTGGAA+AGG | 0.639817 | 4.1:-53857913 | MS.gene95758:CDS |
| AAGCATGAACCTCTTAATGA+GGG | 0.641077 | 4.1:-53855393 | MS.gene95758:CDS |
| CAGCAAATGAATCCCAGTCA+CGG | 0.647461 | 4.1:-53854664 | MS.gene95758:CDS |
| GTTCCTGCGGGGATCCAAGG+GGG | 0.649023 | 4.1:-53855261 | MS.gene95758:CDS |
| CATTCACCTCAATTGAAGGA+GGG | 0.652620 | 4.1:+53857873 | None:intergenic |
| AATTCCTATTGAGAAATCAG+TGG | 0.660421 | 4.1:-53857918 | MS.gene95758:CDS |
| AGGTTGAAAAGGTGAAACTG+TGG | 0.662605 | 4.1:+53854861 | None:intergenic |
| ACCTGTGGGAGTTGTTATGT+CGG | 0.664217 | 4.1:-53856911 | MS.gene95758:intron |
| TTTCCCAACTATGATGCCTG+GGG | 0.674017 | 4.1:-53854635 | MS.gene95758:CDS |
| GCTAAACACACATCCACTGG+AGG | 0.675971 | 4.1:+53856952 | None:intergenic |
| GAAAAGCTTAGCAACAACAA+CGG | 0.677921 | 4.1:-53858013 | MS.gene95758:CDS |
| GATGATGGAAGTGAAGGTGA+AGG | 0.678310 | 4.1:-53857836 | MS.gene95758:CDS |
| ACTTTGCTGCAAATTCAATG+TGG | 0.680521 | 4.1:-53854822 | MS.gene95758:CDS |
| TGCTGCGCTTGAAAGATAGG+GGG | 0.686754 | 4.1:+53854517 | None:intergenic |
| TGTTCCTGCGGGGATCCAAG+GGG | 0.689084 | 4.1:-53855262 | MS.gene95758:CDS |
| AACCAGGATGAAATTGAGAG+GGG | 0.690537 | 4.1:+53854440 | None:intergenic |
| CTGAAAATGATGTTCCTGCG+GGG | 0.698469 | 4.1:-53855272 | MS.gene95758:CDS |
| TGACCCGAACCTTGTTACGG+CGG | 0.720208 | 4.1:-53858110 | MS.gene95758:CDS |
| AACAACCCATGTATGCACCA+GGG | 0.734261 | 4.1:-53854591 | MS.gene95758:CDS |
| GAAGATGGTTAGTTGGAGTG+CGG | 0.757022 | 4.1:-53857675 | MS.gene95758:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTTTTTTTATTTACTAAAA+AGG | - | chr4.1:53856752-53856771 | MS.gene95758:intron | 10.0% |
| !!! | TTTTATTGATAATTAAAGAT+GGG | - | chr4.1:53855150-53855169 | MS.gene95758:CDS | 10.0% |
| !!! | TTTTTTGAAAAAGATAATAA+GGG | + | chr4.1:53855649-53855668 | None:intergenic | 10.0% |
| !!! | TTTTTTTGAAAAAGATAATA+AGG | + | chr4.1:53855650-53855669 | None:intergenic | 10.0% |
| !!! | GTTTTATTGATAATTAAAGA+TGG | - | chr4.1:53855149-53855168 | MS.gene95758:CDS | 15.0% |
| !!! | TTTATTTTCATTCATAAAGT+AGG | - | chr4.1:53854948-53854967 | MS.gene95758:CDS | 15.0% |
| !! | AATACATGAAATATATCAGA+AGG | - | chr4.1:53857018-53857037 | MS.gene95758:intron | 20.0% |
| !! | ATACATGAAATATATCAGAA+GGG | - | chr4.1:53857019-53857038 | MS.gene95758:intron | 20.0% |
| !! | GATAACATGTATATAATCTT+TGG | + | chr4.1:53855208-53855227 | None:intergenic | 20.0% |
| !!! | AACTTTGAAAATATCTTGAA+TGG | - | chr4.1:53855510-53855529 | MS.gene95758:intron | 20.0% |
| !!! | ATTATCTGGTTTTATTTAGA+AGG | - | chr4.1:53855099-53855118 | MS.gene95758:CDS | 20.0% |
| !!! | ATTATGTTCAAACATTTTTG+CGG | + | chr4.1:53856127-53856146 | None:intergenic | 20.0% |
| !!! | CTATTTGATTTTTCATGTAA+CGG | + | chr4.1:53855872-53855891 | None:intergenic | 20.0% |
| !!! | TATTTGATTTTTCATGTAAC+GGG | + | chr4.1:53855871-53855890 | None:intergenic | 20.0% |
| !!! | TGATTGATTCTAACAATAAT+TGG | + | chr4.1:53857048-53857067 | None:intergenic | 20.0% |
| ! | AATTCCTAGATCTTCAAAAT+TGG | + | chr4.1:53855337-53855356 | None:intergenic | 25.0% |
| ! | ACAAAAGGAAATCATTTGAA+TGG | - | chr4.1:53855707-53855726 | MS.gene95758:intron | 25.0% |
| ! | ACACTTGATTTACAAAGATA+GGG | + | chr4.1:53856982-53857001 | None:intergenic | 25.0% |
| ! | ATAGTAGTTACTAGAAAGTA+TGG | - | chr4.1:53855888-53855907 | MS.gene95758:intron | 25.0% |
| ! | ATTAATTAATTGTGTAGTGC+TGG | - | chr4.1:53855127-53855146 | MS.gene95758:CDS | 25.0% |
| ! | CAATCAATGTATTTGAGTAA+CGG | + | chr4.1:53856468-53856487 | None:intergenic | 25.0% |
| ! | CACAAAAAACTTGAACATAA+GGG | + | chr4.1:53856517-53856536 | None:intergenic | 25.0% |
| ! | CATAGTTACAAACATGTAAA+TGG | - | chr4.1:53855252-53855271 | MS.gene95758:CDS | 25.0% |
| ! | CTATTCTACTCATCTAATAA+GGG | + | chr4.1:53855680-53855699 | None:intergenic | 25.0% |
| ! | GAATACTTGAATTCCATTTA+GGG | + | chr4.1:53856351-53856370 | None:intergenic | 25.0% |
| ! | GGTTGTTGTGAAAATATATT+GGG | + | chr4.1:53857910-53857929 | None:intergenic | 25.0% |
| ! | GTCAAGTATATAAATGTTTC+TGG | + | chr4.1:53855230-53855249 | None:intergenic | 25.0% |
| ! | TAGAATAGAAGATGAACAAA+AGG | - | chr4.1:53855692-53855711 | MS.gene95758:intron | 25.0% |
| ! | TCTATTCTACTCATCTAATA+AGG | + | chr4.1:53855681-53855700 | None:intergenic | 25.0% |
| ! | TGAAAAAGATAATAAGGGAT+GGG | + | chr4.1:53855644-53855663 | None:intergenic | 25.0% |
| ! | TGAATACTTGAATTCCATTT+AGG | + | chr4.1:53856352-53856371 | None:intergenic | 25.0% |
| ! | TTGAAAAAGATAATAAGGGA+TGG | + | chr4.1:53855645-53855664 | None:intergenic | 25.0% |
| ! | TTGATTCTAACAATAATTGG+TGG | + | chr4.1:53857045-53857064 | None:intergenic | 25.0% |
| ! | TTGTATCTCACAACATAATA+CGG | + | chr4.1:53857220-53857239 | None:intergenic | 25.0% |
| !! | ATCTCATTCTTTGACTTAAT+TGG | + | chr4.1:53854906-53854925 | None:intergenic | 25.0% |
| !! | TTTTCTTCATAACATGTTTC+TGG | + | chr4.1:53855184-53855203 | None:intergenic | 25.0% |
| !! | TTTTCTTTCTCTAGTTGATT+GGG | - | chr4.1:53856952-53856971 | MS.gene95758:CDS | 25.0% |
| !! | TTTTTCTTTCTCTAGTTGAT+TGG | - | chr4.1:53856951-53856970 | MS.gene95758:CDS | 25.0% |
| !!! | TTATTGTTTTTTTTCTTGCC+AGG | + | chr4.1:53857475-53857494 | None:intergenic | 25.0% |
| !!! | TTTTTTGTTGTGACCAATTT+GGG | - | chr4.1:53856011-53856030 | MS.gene95758:intron | 25.0% |
| !!! | TTTTTTTGTTGTGACCAATT+TGG | - | chr4.1:53856010-53856029 | MS.gene95758:intron | 25.0% |
| AAATCCCTAAGAATAGTAGT+TGG | - | chr4.1:53856565-53856584 | MS.gene95758:intron | 30.0% | |
| AATAACAGTGTAGAACTTGA+CGG | + | chr4.1:53856418-53856437 | None:intergenic | 30.0% | |
| AATTCCTATTGAGAAATCAG+TGG | - | chr4.1:53854596-53854615 | MS.gene95758:CDS | 30.0% | |
| ACAACCAACTACTATTCTTA+GGG | + | chr4.1:53856572-53856591 | None:intergenic | 30.0% | |
| AGTTACAAACATGTAAATGG+TGG | - | chr4.1:53855255-53855274 | MS.gene95758:CDS | 30.0% | |
| ATGCATATGGAACAGAATAT+AGG | - | chr4.1:53855980-53855999 | MS.gene95758:intron | 30.0% | |
| ATGCTTCATTGACAATTATC+TGG | - | chr4.1:53855085-53855104 | MS.gene95758:CDS | 30.0% | |
| ATTACAGCAAATGAACTCAA+AGG | - | chr4.1:53855787-53855806 | MS.gene95758:intron | 30.0% | |
| ATTCAAGTATTCAACCCTAT+TGG | - | chr4.1:53856359-53856378 | MS.gene95758:intron | 30.0% | |
| ATTGAATTTGCAGCAAAGTT+AGG | + | chr4.1:53857691-53857710 | None:intergenic | 30.0% | |
| ATTTCATCAACTAAACCTAG+TGG | + | chr4.1:53857178-53857197 | None:intergenic | 30.0% | |
| CCACAAAAAACTTGAACATA+AGG | + | chr4.1:53856518-53856537 | None:intergenic | 30.0% | |
| CTACAACTATAGAAGCAATT+AGG | - | chr4.1:53856188-53856207 | MS.gene95758:intron | 30.0% | |
| GACACTTGATTTACAAAGAT+AGG | + | chr4.1:53856983-53857002 | None:intergenic | 30.0% | |
| GATATATGAACGAGAAAGTT+TGG | + | chr4.1:53856649-53856668 | None:intergenic | 30.0% | |
| GCATCTAAATCTACAAGATT+GGG | + | chr4.1:53856545-53856564 | None:intergenic | 30.0% | |
| GGGTTGTTGTGAAAATATAT+TGG | + | chr4.1:53857911-53857930 | None:intergenic | 30.0% | |
| GTAAAAGCAATTAGCCAATA+GGG | + | chr4.1:53856376-53856395 | None:intergenic | 30.0% | |
| TAAGTCAAAGAATGAGATTC+AGG | - | chr4.1:53854908-53854927 | MS.gene95758:CDS | 30.0% | |
| TAATATGACATGGCATTTGA+AGG | + | chr4.1:53857775-53857794 | None:intergenic | 30.0% | |
| TCAATAGTAAGGATCTTTAC+AGG | - | chr4.1:53857320-53857339 | MS.gene95758:intron | 30.0% | |
| TCCTTTATTAACGAATGATG+TGG | + | chr4.1:53857593-53857612 | None:intergenic | 30.0% | |
| TGCATCTAAATCTACAAGAT+TGG | + | chr4.1:53856546-53856565 | None:intergenic | 30.0% | |
| TGTAAAAGCAATTAGCCAAT+AGG | + | chr4.1:53856377-53856396 | None:intergenic | 30.0% | |
| TGTATCTCACAACATAATAC+GGG | + | chr4.1:53857219-53857238 | None:intergenic | 30.0% | |
| TTCAAAGCAACATGTCAAAT+AGG | + | chr4.1:53855362-53855381 | None:intergenic | 30.0% | |
| TTTCTTCTTTAACAGACTCT+CGG | - | chr4.1:53857070-53857089 | MS.gene95758:intron | 30.0% | |
| ! | GTTTTGTGGATAATATGACA+TGG | + | chr4.1:53857785-53857804 | None:intergenic | 30.0% |
| ! | TGAGAAAATTGTGTGTTTTG+TGG | + | chr4.1:53857799-53857818 | None:intergenic | 30.0% |
| !! | GGTTTAGTTGATGAAATCTT+TGG | - | chr4.1:53857181-53857200 | MS.gene95758:intron | 30.0% |
| !! | TATTTGACATGTTGCTTTGA+AGG | - | chr4.1:53855361-53855380 | MS.gene95758:CDS | 30.0% |
| !!! | AATGGCAAGATTTTGAAACT+TGG | - | chr4.1:53855725-53855744 | MS.gene95758:intron | 30.0% |
| !!! | AGATTTTGAGGTATTAGTTC+CGG | + | chr4.1:53854435-53854454 | None:intergenic | 30.0% |
| !!! | CCTTATGTTCAAGTTTTTTG+TGG | - | chr4.1:53856515-53856534 | MS.gene95758:intron | 30.0% |
| !!! | TGACTTTGAGTTTTGAGTTT+TGG | - | chr4.1:53855005-53855024 | MS.gene95758:CDS | 30.0% |
| AAAAGCTTAGCAACAACAAC+GGG | - | chr4.1:53854502-53854521 | MS.gene95758:CDS | 35.0% | |
| AAGCATGAACCTCTTAATGA+GGG | - | chr4.1:53857121-53857140 | MS.gene95758:intron | 35.0% | |
| AAGTTAGGACCTGCATTTAA+AGG | + | chr4.1:53857676-53857695 | None:intergenic | 35.0% | |
| AAGTTTGGTTGTGAGAATGT+AGG | + | chr4.1:53856634-53856653 | None:intergenic | 35.0% | |
| ACGCAAAAAATGACAAAGAG+AGG | - | chr4.1:53857433-53857452 | MS.gene95758:intron | 35.0% | |
| ACTTTGCTGCAAATTCAATG+TGG | - | chr4.1:53857692-53857711 | MS.gene95758:CDS | 35.0% | |
| AGCAAATGAACTCAAAGGTA+AGG | - | chr4.1:53855792-53855811 | MS.gene95758:intron | 35.0% | |
| AGTAAGGATCTTTACAGGAA+AGG | - | chr4.1:53857325-53857344 | MS.gene95758:intron | 35.0% | |
| ATCATGTGTTACGATGCATA+TGG | - | chr4.1:53855967-53855986 | MS.gene95758:intron | 35.0% | |
| ATGATGAGAAGATGGTTAGT+TGG | - | chr4.1:53854832-53854851 | MS.gene95758:CDS | 35.0% | |
| ATGCTGAAGAAGAAGAAGAA+GGG | - | chr4.1:53854799-53854818 | MS.gene95758:CDS | 35.0% | |
| ATGGAAACCCAAAACAACAA+CGG | - | chr4.1:53854372-53854391 | MS.gene95758:CDS | 35.0% | |
| CACAACCAACTACTATTCTT+AGG | + | chr4.1:53856573-53856592 | None:intergenic | 35.0% | |
| CATTACAAAGCATATGAGAC+TGG | + | chr4.1:53856671-53856690 | None:intergenic | 35.0% | |
| CCTGCATTTAAAGGTTGAAA+AGG | + | chr4.1:53857667-53857686 | None:intergenic | 35.0% | |
| CGCAAAAAATGACAAAGAGA+GGG | - | chr4.1:53857434-53857453 | MS.gene95758:intron | 35.0% | |
| CTACTCATCTAATAAGGGAT+GGG | + | chr4.1:53855675-53855694 | None:intergenic | 35.0% | |
| CTATTGAGAAATCAGTGGAA+AGG | - | chr4.1:53854601-53854620 | MS.gene95758:CDS | 35.0% | |
| GAAAAGCTTAGCAACAACAA+CGG | - | chr4.1:53854501-53854520 | MS.gene95758:CDS | 35.0% | |
| GATGATGAAGATGTTGTAGT+AGG | - | chr4.1:53854879-53854898 | MS.gene95758:CDS | 35.0% | |
| GCAAAAAATGACAAAGAGAG+GGG | - | chr4.1:53857435-53857454 | MS.gene95758:intron | 35.0% | |
| GCAACTAAATCTTGTAGAAC+AGG | - | chr4.1:53856097-53856116 | MS.gene95758:intron | 35.0% | |
| GCATTTGAAGGAAATGCATT+TGG | + | chr4.1:53857763-53857782 | None:intergenic | 35.0% | |
| GCCACATCATTCGTTAATAA+AGG | - | chr4.1:53857589-53857608 | MS.gene95758:intron | 35.0% | |
| TCTACTCATCTAATAAGGGA+TGG | + | chr4.1:53855676-53855695 | None:intergenic | 35.0% | |
| TGAACATGTGCTCAATAGTA+AGG | - | chr4.1:53857309-53857328 | MS.gene95758:intron | 35.0% | |
| TGAGAATGTAGGTAAGGATT+TGG | + | chr4.1:53856623-53856642 | None:intergenic | 35.0% | |
| TTTGAAGGAAATGCATTTGG+AGG | + | chr4.1:53857760-53857779 | None:intergenic | 35.0% | |
| ! | ACATAATACGGGTTTTTGAC+CGG | + | chr4.1:53857208-53857227 | None:intergenic | 35.0% |
| ! | CCTTTTCAACCTTTAAATGC+AGG | - | chr4.1:53857664-53857683 | MS.gene95758:CDS | 35.0% |
| ! | GATAAGTGATGATGAGAAGA+TGG | - | chr4.1:53854824-53854843 | MS.gene95758:CDS | 35.0% |
| ! | GTTTTCAGATGATGAGAAAG+AGG | - | chr4.1:53857396-53857415 | MS.gene95758:intron | 35.0% |
| ! | TGGGTTAGATTGTGAAACAT+GGG | - | chr4.1:53855821-53855840 | MS.gene95758:intron | 35.0% |
| ! | TTCTGAAAATGATGTTCCTG+CGG | - | chr4.1:53857240-53857259 | MS.gene95758:intron | 35.0% |
| ! | TTGTCGTTAACGAGATTTTG+AGG | + | chr4.1:53854447-53854466 | None:intergenic | 35.0% |
| !! | AGTTGATGAAATCTTTGGAC+CGG | - | chr4.1:53857186-53857205 | MS.gene95758:intron | 35.0% |
| !! | CAAACATGTAAATGGTGGAT+TGG | - | chr4.1:53855260-53855279 | MS.gene95758:CDS | 35.0% |
| !! | CTTTCCACTGATTTCTCAAT+AGG | + | chr4.1:53854603-53854622 | None:intergenic | 35.0% |
| !! | GAGTAACGGATAATCAACAT+TGG | + | chr4.1:53856454-53856473 | None:intergenic | 35.0% |
| !! | GATAAAGATGATGGAAGTGA+AGG | - | chr4.1:53854672-53854691 | MS.gene95758:CDS | 35.0% |
| !! | GGATTCATTTGCTGTTGAAA+TGG | + | chr4.1:53857844-53857863 | None:intergenic | 35.0% |
| !! | TCATTTGCTGTAATGTCTTG+TGG | + | chr4.1:53855781-53855800 | None:intergenic | 35.0% |
| !! | TGAGCCAATTTTGAAGATCT+AGG | - | chr4.1:53855330-53855349 | MS.gene95758:CDS | 35.0% |
| !! | TTGTTGTTGCTAAGCTTTTC+AGG | + | chr4.1:53854501-53854520 | None:intergenic | 35.0% |
| !!! | TACTCTCCTTTTTCAGGTAT+TGG | - | chr4.1:53857616-53857635 | MS.gene95758:CDS | 35.0% |
| AACAGACCAAACTGCAGTTA+AGG | + | chr4.1:53855295-53855314 | None:intergenic | 40.0% | |
| AACCAGGATGAAATTGAGAG+GGG | + | chr4.1:53858077-53858096 | None:intergenic | 40.0% | |
| ACACCATAAAATGCTACCTG+TGG | - | chr4.1:53855588-53855607 | MS.gene95758:intron | 40.0% | |
| ACAGACCAAACTGCAGTTAA+GGG | + | chr4.1:53855294-53855313 | None:intergenic | 40.0% | |
| ACTCAAAGGTAAGGTTCATG+TGG | - | chr4.1:53855801-53855820 | MS.gene95758:intron | 40.0% | |
| AGAACAGAACCCTCATTAAG+AGG | + | chr4.1:53857133-53857152 | None:intergenic | 40.0% | |
| AGCACATGTTCAGCAAATTC+TGG | + | chr4.1:53857301-53857320 | None:intergenic | 40.0% | |
| AGGTTGAAAAGGTGAAACTG+TGG | + | chr4.1:53857656-53857675 | None:intergenic | 40.0% | |
| AGTGGAAAGGATCACGTTAA+CGG | - | chr4.1:53854614-53854633 | MS.gene95758:CDS | 40.0% | |
| ATCTGTTGGAAGGATTGTTG+TGG | + | chr4.1:53857970-53857989 | None:intergenic | 40.0% | |
| ATGAGAAAGAGGCTGAATAC+AGG | - | chr4.1:53857407-53857426 | MS.gene95758:intron | 40.0% | |
| ATTCAACTACCAGTCGAAGA+GGG | - | chr4.1:53856595-53856614 | MS.gene95758:intron | 40.0% | |
| ATTTCCCAACTATGATGCCT+GGG | - | chr4.1:53857878-53857897 | MS.gene95758:CDS | 40.0% | |
| CAAAAGACATTGTAGAGCAC+TGG | + | chr4.1:53856918-53856937 | None:intergenic | 40.0% | |
| CAACTAAACCTAGTGGTTTG+CGG | + | chr4.1:53857171-53857190 | None:intergenic | 40.0% | |
| CAATTTCATCCTGGTTCATC+AGG | - | chr4.1:53858081-53858100 | MS.gene95758:CDS | 40.0% | |
| CACCATAAAATGCTACCTGT+GGG | - | chr4.1:53855589-53855608 | MS.gene95758:intron | 40.0% | |
| CATAATCACGCAACCTCTAA+AGG | - | chr4.1:53856141-53856160 | MS.gene95758:intron | 40.0% | |
| CATTCACCTCAATTGAAGGA+GGG | + | chr4.1:53854644-53854663 | None:intergenic | 40.0% | |
| CCATTTAGGGAAACTGCAAA+AGG | + | chr4.1:53856338-53856357 | None:intergenic | 40.0% | |
| CCTTGTCCAATACCTGAAAA+AGG | + | chr4.1:53857625-53857644 | None:intergenic | 40.0% | |
| CTCAAAGGTAAGGTTCATGT+GGG | - | chr4.1:53855802-53855821 | MS.gene95758:intron | 40.0% | |
| CTCCTTCAATTGAGGTGAAT+GGG | - | chr4.1:53854643-53854662 | MS.gene95758:CDS | 40.0% | |
| GAACCAGGATGAAATTGAGA+GGG | + | chr4.1:53858078-53858097 | None:intergenic | 40.0% | |
| GAAGCATGAACCTCTTAATG+AGG | - | chr4.1:53857120-53857139 | MS.gene95758:intron | 40.0% | |
| GATGCTGAAGAAGAAGAAGA+AGG | - | chr4.1:53854798-53854817 | MS.gene95758:CDS | 40.0% | |
| GCATCGTAACACATGATGTT+TGG | + | chr4.1:53855964-53855983 | None:intergenic | 40.0% | |
| GGGGTAAATGATCAAAATCC+TGG | - | chr4.1:53857454-53857473 | MS.gene95758:intron | 40.0% | |
| GTTGTGACCAATTTGGGTAA+GGG | - | chr4.1:53856017-53856036 | MS.gene95758:intron | 40.0% | |
| TCCTTCAATTGAGGTGAATG+GGG | - | chr4.1:53854644-53854663 | MS.gene95758:CDS | 40.0% | |
| TCTGAAAATGATGTTCCTGC+GGG | - | chr4.1:53857241-53857260 | MS.gene95758:intron | 40.0% | |
| TGAAATGGAATTCCTGGAAC+AGG | + | chr4.1:53857829-53857848 | None:intergenic | 40.0% | |
| TGAACCAGGATGAAATTGAG+AGG | + | chr4.1:53858079-53858098 | None:intergenic | 40.0% | |
| TGCTGAAGAAGAAGAAGAAG+GGG | - | chr4.1:53854800-53854819 | MS.gene95758:CDS | 40.0% | |
| TGCTGTTGAAATGGAATTCC+TGG | + | chr4.1:53857835-53857854 | None:intergenic | 40.0% | |
| TGGAAACCCAAAACAACAAC+GGG | - | chr4.1:53854373-53854392 | MS.gene95758:CDS | 40.0% | |
| TGGTTGTGAAATTCAACCAC+CGG | + | chr4.1:53856059-53856078 | None:intergenic | 40.0% | |
| TGGTTGTGAGAATGTAGGTA+AGG | + | chr4.1:53856629-53856648 | None:intergenic | 40.0% | |
| TGTAACTTGAAGGTGACAAG+AGG | - | chr4.1:53856164-53856183 | MS.gene95758:intron | 40.0% | |
| TGTATCCCTTAACTGCAGTT+TGG | - | chr4.1:53855286-53855305 | MS.gene95758:CDS | 40.0% | |
| TGTTGTGACCAATTTGGGTA+AGG | - | chr4.1:53856016-53856035 | MS.gene95758:intron | 40.0% | |
| TTAATGAGGGTTCTGTTCTG+TGG | - | chr4.1:53857134-53857153 | MS.gene95758:intron | 40.0% | |
| TTCACAACCAACTGTTCTTC+TGG | - | chr4.1:53856069-53856088 | MS.gene95758:intron | 40.0% | |
| ! | ACAGGTAGCATTTTATGGTG+TGG | + | chr4.1:53855589-53855608 | None:intergenic | 40.0% |
| ! | CAGTGCTCTACAATGTCTTT+TGG | - | chr4.1:53856916-53856935 | MS.gene95758:CDS | 40.0% |
| ! | CCTCTAAAGGTGTAACTTGA+AGG | - | chr4.1:53856154-53856173 | MS.gene95758:intron | 40.0% |
| ! | CCTTCAAGTTACACCTTTAG+AGG | + | chr4.1:53856157-53856176 | None:intergenic | 40.0% |
| ! | CCTTTTGCAGTTTCCCTAAA+TGG | - | chr4.1:53856335-53856354 | MS.gene95758:intron | 40.0% |
| ! | GGAAACTACTCTCCTTTTTC+AGG | - | chr4.1:53857610-53857629 | MS.gene95758:CDS | 40.0% |
| ! | GGGTGCAATTTCTAAAGACA+AGG | + | chr4.1:53856497-53856516 | None:intergenic | 40.0% |
| ! | TGGGTTAGATTGTGAGATGT+GGG | + | chr4.1:53856840-53856859 | None:intergenic | 40.0% |
| !! | GTGGGTTAGATTGTGAAACA+TGG | - | chr4.1:53855820-53855839 | MS.gene95758:intron | 40.0% |
| !! | TGTTGCTTTGAAGGTAGCTT+TGG | - | chr4.1:53855370-53855389 | MS.gene95758:CDS | 40.0% |
| !!! | CCTTTTTCAGGTATTGGACA+AGG | - | chr4.1:53857622-53857641 | MS.gene95758:CDS | 40.0% |
| !!! | TTTTCAGGTATTGGACAAGG+TGG | - | chr4.1:53857625-53857644 | MS.gene95758:CDS | 40.0% |
| AACAACCCATGTATGCACCA+GGG | - | chr4.1:53857923-53857942 | MS.gene95758:CDS | 45.0% | |
| AACCCAAAACAACAACGGGT+CGG | - | chr4.1:53854377-53854396 | MS.gene95758:CDS | 45.0% | |
| AACCCCTCTCAATTTCATCC+TGG | - | chr4.1:53858072-53858091 | MS.gene95758:CDS | 45.0% | |
| AAGGAAATGCATTTGGAGGC+AGG | + | chr4.1:53857756-53857775 | None:intergenic | 45.0% | |
| AATATATTGGGCTGTACCCC+AGG | + | chr4.1:53857898-53857917 | None:intergenic | 45.0% | |
| AATTGAGGTGAATGGGGATG+AGG | - | chr4.1:53854650-53854669 | MS.gene95758:CDS | 45.0% | |
| ACCTGTGGGAGTTGTTATGT+CGG | - | chr4.1:53855603-53855622 | MS.gene95758:intron | 45.0% | |
| AGCGAATGAACCCAAAGGTA+AGG | + | chr4.1:53856869-53856888 | None:intergenic | 45.0% | |
| AGGAAAGGCTATGATGCATC+TGG | - | chr4.1:53857340-53857359 | MS.gene95758:intron | 45.0% | |
| AGGAAATGCATTTGGAGGCA+GGG | + | chr4.1:53857755-53857774 | None:intergenic | 45.0% | |
| ATCTTTCAAGCGCAGCAACA+GGG | - | chr4.1:53858003-53858022 | MS.gene95758:CDS | 45.0% | |
| ATTGCAGCGAATGAACCCAA+AGG | + | chr4.1:53856874-53856893 | None:intergenic | 45.0% | |
| CAGCAAATGAATCCCAGTCA+CGG | - | chr4.1:53857850-53857869 | MS.gene95758:CDS | 45.0% | |
| CATTCAACTACCAGTCGAAG+AGG | - | chr4.1:53856594-53856613 | MS.gene95758:intron | 45.0% | |
| CATTTCCCAACTATGATGCC+TGG | - | chr4.1:53857877-53857896 | MS.gene95758:CDS | 45.0% | |
| CCATTCACCTCAATTGAAGG+AGG | + | chr4.1:53854645-53854664 | None:intergenic | 45.0% | |
| CCTCCTTCAATTGAGGTGAA+TGG | - | chr4.1:53854642-53854661 | MS.gene95758:CDS | 45.0% | |
| CTGAAAATGATGTTCCTGCG+GGG | - | chr4.1:53857242-53857261 | MS.gene95758:intron | 45.0% | |
| CTTTCTGCAGCATCGCTAAT+AGG | + | chr4.1:53856257-53856276 | None:intergenic | 45.0% | |
| GCAAGATCCAGAAGAACAGT+TGG | + | chr4.1:53856079-53856098 | None:intergenic | 45.0% | |
| GCAGTTTGGTCTGTTCTTGA+GGG | - | chr4.1:53855300-53855319 | MS.gene95758:CDS | 45.0% | |
| GCTGCAATGTCTTGTGGAAT+TGG | - | chr4.1:53856886-53856905 | MS.gene95758:intron | 45.0% | |
| GGAGGTAACACATGCTCTTT+CGG | + | chr4.1:53857511-53857530 | None:intergenic | 45.0% | |
| GGGGATGAGGATAAAGATGA+TGG | - | chr4.1:53854663-53854682 | MS.gene95758:CDS | 45.0% | |
| GTGGAAAGGATCACGTTAAC+GGG | - | chr4.1:53854615-53854634 | MS.gene95758:CDS | 45.0% | |
| GTTGCTGCGCTTGAAAGATA+GGG | + | chr4.1:53858002-53858021 | None:intergenic | 45.0% | |
| TATCTTTCAAGCGCAGCAAC+AGG | - | chr4.1:53858002-53858021 | MS.gene95758:CDS | 45.0% | |
| TCAAGTCATTGTGGAAGGAG+TGG | - | chr4.1:53857096-53857115 | MS.gene95758:intron | 45.0% | |
| TCATTCGCTGCAATGTCTTG+TGG | - | chr4.1:53856880-53856899 | MS.gene95758:intron | 45.0% | |
| TCCCCATTCACCTCAATTGA+AGG | + | chr4.1:53854648-53854667 | None:intergenic | 45.0% | |
| TCTCATCAGTTTCCTGTTCC+AGG | - | chr4.1:53857814-53857833 | MS.gene95758:CDS | 45.0% | |
| TGCAGTTTGGTCTGTTCTTG+AGG | - | chr4.1:53855299-53855318 | MS.gene95758:CDS | 45.0% | |
| TGTTGCTGCGCTTGAAAGAT+AGG | + | chr4.1:53858003-53858022 | None:intergenic | 45.0% | |
| TTCAACTACCAGTCGAAGAG+GGG | - | chr4.1:53856596-53856615 | MS.gene95758:intron | 45.0% | |
| TTGCTGCGCTTGAAAGATAG+GGG | + | chr4.1:53858001-53858020 | None:intergenic | 45.0% | |
| TTGTGAAATTCAACCACCGG+TGG | + | chr4.1:53856056-53856075 | None:intergenic | 45.0% | |
| TTTCCCAACTATGATGCCTG+GGG | - | chr4.1:53857879-53857898 | MS.gene95758:CDS | 45.0% | |
| ! | ACTTGACCCGAACCCTTTTT+CGG | - | chr4.1:53854530-53854549 | MS.gene95758:CDS | 45.0% |
| ! | CTCCCACAGGTAGCATTTTA+TGG | + | chr4.1:53855594-53855613 | None:intergenic | 45.0% |
| ! | GAAGATGGTTAGTTGGAGTG+CGG | - | chr4.1:53854839-53854858 | MS.gene95758:CDS | 45.0% |
| !! | AACACATGATGTGGTGCTAC+AGG | + | chr4.1:53857541-53857560 | None:intergenic | 45.0% |
| !! | ACCCGAAGTACCAAGCTTTT+CGG | + | chr4.1:53854571-53854590 | None:intergenic | 45.0% |
| !! | AGACATTGTAGAGCACTGGT+CGG | + | chr4.1:53856914-53856933 | None:intergenic | 45.0% |
| !! | GAAGTGTTGAAGTGACCATG+CGG | - | chr4.1:53856213-53856232 | MS.gene95758:intron | 45.0% |
| !! | GATGATGGAAGTGAAGGTGA+AGG | - | chr4.1:53854678-53854697 | MS.gene95758:CDS | 45.0% |
| !! | GTGGGTTAGATTGTGAGATG+TGG | + | chr4.1:53856841-53856860 | None:intergenic | 45.0% |
| !! | TTGCTAAGCTTTTCAGGCTG+TGG | + | chr4.1:53854495-53854514 | None:intergenic | 45.0% |
| !!! | TTCCGACCCGTTGTTGTTTT+GGG | + | chr4.1:53854382-53854401 | None:intergenic | 45.0% |
| AATGCATTTGGAGGCAGGGA+AGG | + | chr4.1:53857751-53857770 | None:intergenic | 50.0% | |
| AATTCAACCACCGGTGGAAG+AGG | + | chr4.1:53856050-53856069 | None:intergenic | 50.0% | |
| ACCCAAAGGTAAGGTTCGTG+TGG | + | chr4.1:53856860-53856879 | None:intergenic | 50.0% | |
| ACCCACACGAACCTTACCTT+TGG | - | chr4.1:53856855-53856874 | MS.gene95758:intron | 50.0% | |
| ACCGACATAACAACTCCCAC+AGG | + | chr4.1:53855607-53855626 | None:intergenic | 50.0% | |
| ACCTGACCCGAACCTTGTTA+CGG | - | chr4.1:53854401-53854420 | MS.gene95758:CDS | 50.0% | |
| ACGAACCCTGGTGCATACAT+GGG | + | chr4.1:53857931-53857950 | None:intergenic | 50.0% | |
| ACTGAAAGCCGCAAACCACT+AGG | - | chr4.1:53857160-53857179 | MS.gene95758:intron | 50.0% | |
| AGACCAAAGTTGTTCCCCCT+TGG | + | chr4.1:53857270-53857289 | None:intergenic | 50.0% | |
| AGACCATCATTTCGTGGTGC+CGG | - | chr4.1:53858114-53858133 | MS.gene95758:CDS | 50.0% | |
| ATGTATGCACCAGGGTTCGT+GGG | - | chr4.1:53857931-53857950 | MS.gene95758:CDS | 50.0% | |
| ATTCAACCACCGGTGGAAGA+GGG | + | chr4.1:53856049-53856068 | None:intergenic | 50.0% | |
| CAACAACCCATGTATGCACC+AGG | - | chr4.1:53857922-53857941 | MS.gene95758:CDS | 50.0% | |
| CAGCGTCCTAGTCCTATTTC+TGG | - | chr4.1:53858048-53858067 | MS.gene95758:CDS | 50.0% | |
| CCCAAAGGTAAGGTTCGTGT+GGG | + | chr4.1:53856859-53856878 | None:intergenic | 50.0% | |
| CCCACACGAACCTTACCTTT+GGG | - | chr4.1:53856856-53856875 | MS.gene95758:intron | 50.0% | |
| CGTTAACGACAACCCTGTTG+CGG | - | chr4.1:53854455-53854474 | MS.gene95758:CDS | 50.0% | |
| CTGGTTCATCAGGTAGTCGA+GGG | - | chr4.1:53858091-53858110 | MS.gene95758:CDS | 50.0% | |
| GATCCAAGGGGGAACAACTT+TGG | - | chr4.1:53857264-53857283 | MS.gene95758:intron | 50.0% | |
| GCCGAAAAGCTTGGTACTTC+GGG | - | chr4.1:53854567-53854586 | MS.gene95758:CDS | 50.0% | |
| GCGGTAGGAAACACATGATG+TGG | + | chr4.1:53857550-53857569 | None:intergenic | 50.0% | |
| GCTAAACACACATCCACTGG+AGG | + | chr4.1:53855565-53855584 | None:intergenic | 50.0% | |
| GGAAGGATTGTTGTGGCATC+TGG | + | chr4.1:53857963-53857982 | None:intergenic | 50.0% | |
| GGAGCTCAAGTCATTGTGGA+AGG | - | chr4.1:53857091-53857110 | MS.gene95758:intron | 50.0% | |
| GGCCGAAAAGCTTGGTACTT+CGG | - | chr4.1:53854566-53854585 | MS.gene95758:CDS | 50.0% | |
| GGCTAAGCCCTTACCCAAAT+TGG | + | chr4.1:53856027-53856046 | None:intergenic | 50.0% | |
| GGGAAATGAGTTCCGTGACT+GGG | + | chr4.1:53857865-53857884 | None:intergenic | 50.0% | |
| GGGTTGCCAGAAATAGGACT+AGG | + | chr4.1:53858057-53858076 | None:intergenic | 50.0% | |
| GGGTTGCTGAATCTGTTGGA+AGG | + | chr4.1:53857980-53857999 | None:intergenic | 50.0% | |
| GGTGCTAAACACACATCCAC+TGG | + | chr4.1:53855568-53855587 | None:intergenic | 50.0% | |
| GTACCCCAGGCATCATAGTT+GGG | + | chr4.1:53857885-53857904 | None:intergenic | 50.0% | |
| TAGGGGGTTGCTGAATCTGT+TGG | + | chr4.1:53857984-53858003 | None:intergenic | 50.0% | |
| TCAACTACCAGTCGAAGAGG+GGG | - | chr4.1:53856597-53856616 | MS.gene95758:intron | 50.0% | |
| TCAAGAACTTGACCTCCGCA+TGG | + | chr4.1:53856231-53856250 | None:intergenic | 50.0% | |
| TCTCGGAGCTCAAGTCATTG+TGG | - | chr4.1:53857087-53857106 | MS.gene95758:intron | 50.0% | |
| TGAGAGGGGTTGCCAGAAAT+AGG | + | chr4.1:53858063-53858082 | None:intergenic | 50.0% | |
| TGCTGCGCTTGAAAGATAGG+GGG | + | chr4.1:53858000-53858019 | None:intergenic | 50.0% | |
| TGGGAAATGAGTTCCGTGAC+TGG | + | chr4.1:53857866-53857885 | None:intergenic | 50.0% | |
| TGTACCCCAGGCATCATAGT+TGG | + | chr4.1:53857886-53857905 | None:intergenic | 50.0% | |
| TTTGCTTCCAGTTCCTCCAG+TGG | - | chr4.1:53855549-53855568 | MS.gene95758:intron | 50.0% | |
| !! | AGCTTTTCAGGCTGTGGCTT+AGG | + | chr4.1:53854489-53854508 | None:intergenic | 50.0% |
| !! | GCTTTGAAGGTAGCTTTGGC+TGG | - | chr4.1:53855374-53855393 | MS.gene95758:CDS | 50.0% |
| !! | TGTGGTGCTACAGGTGCATT+AGG | + | chr4.1:53857532-53857551 | None:intergenic | 50.0% |
| !!! | GTTCCGACCCGTTGTTGTTT+TGG | + | chr4.1:53854383-53854402 | None:intergenic | 50.0% |
| ACGAATGATGTGGCTGCTGC+AGG | + | chr4.1:53857583-53857602 | None:intergenic | 55.0% | |
| AGGACGCTGCTGCAATTCAG+TGG | + | chr4.1:53858037-53858056 | None:intergenic | 55.0% | |
| ATGTTCCTGCGGGGATCCAA+GGG | - | chr4.1:53857251-53857270 | MS.gene95758:intron | 55.0% | |
| CACACATCCACTGGAGGAAC+TGG | + | chr4.1:53855559-53855578 | None:intergenic | 55.0% | |
| CACGAACCCTGGTGCATACA+TGG | + | chr4.1:53857932-53857951 | None:intergenic | 55.0% | |
| CATGTATGCACCAGGGTTCG+TGG | - | chr4.1:53857930-53857949 | MS.gene95758:CDS | 55.0% | |
| CCTCGACTACCTGATGAACC+AGG | + | chr4.1:53858093-53858112 | None:intergenic | 55.0% | |
| CCTGGTTCATCAGGTAGTCG+AGG | - | chr4.1:53858090-53858109 | MS.gene95758:CDS | 55.0% | |
| CGAGGGAGACCATCATTTCG+TGG | - | chr4.1:53858108-53858127 | MS.gene95758:CDS | 55.0% | |
| CGTCATCATCGTCGACGTCT+GGG | - | chr4.1:53854748-53854767 | MS.gene95758:CDS | 55.0% | |
| GGACGCTGCTGCAATTCAGT+GGG | + | chr4.1:53858036-53858055 | None:intergenic | 55.0% | |
| GGGTGACCCTCCTTCAATTG+AGG | - | chr4.1:53854635-53854654 | MS.gene95758:CDS | 55.0% | |
| GTCTCCGCCGAAAAAGGGTT+CGG | + | chr4.1:53854540-53854559 | None:intergenic | 55.0% | |
| GTCTCCGCCGTAACAAGGTT+CGG | + | chr4.1:53854411-53854430 | None:intergenic | 55.0% | |
| GTGTTGAAGTGACCATGCGG+AGG | - | chr4.1:53856216-53856235 | MS.gene95758:intron | 55.0% | |
| GTTAGTTGGAGTGCGGCTGA+TGG | - | chr4.1:53854846-53854865 | MS.gene95758:CDS | 55.0% | |
| TAGGTGTCTCTGCCGCAACA+GGG | + | chr4.1:53854470-53854489 | None:intergenic | 55.0% | |
| TCGTCATCATCGTCGACGTC+TGG | - | chr4.1:53854747-53854766 | MS.gene95758:CDS | 55.0% | |
| TCTCCGCCGAAAAAGGGTTC+GGG | + | chr4.1:53854539-53854558 | None:intergenic | 55.0% | |
| TCTCCGCCGTAACAAGGTTC+GGG | + | chr4.1:53854410-53854429 | None:intergenic | 55.0% | |
| TGACCCGAACCTTGTTACGG+CGG | - | chr4.1:53854404-53854423 | MS.gene95758:CDS | 55.0% | |
| TGGCTGCTGCAGGTGCATTA+GGG | + | chr4.1:53857573-53857592 | None:intergenic | 55.0% | |
| TTAGGTGTCTCTGCCGCAAC+AGG | + | chr4.1:53854471-53854490 | None:intergenic | 55.0% | |
| TTCAACCACCGGTGGAAGAG+GGG | + | chr4.1:53856048-53856067 | None:intergenic | 55.0% | |
| ! | GGTGCTACAGGTGCATTAGG+AGG | + | chr4.1:53857529-53857548 | None:intergenic | 55.0% |
| ! | GTACCAAGCTTTTCGGCCAC+CGG | + | chr4.1:53854564-53854583 | None:intergenic | 55.0% |
| !!! | TGACCCGAACCCTTTTTCGG+CGG | - | chr4.1:53854533-53854552 | MS.gene95758:CDS | 55.0% |
| !!! | TGGTTTTGACCCACGAACCC+TGG | + | chr4.1:53857943-53857962 | None:intergenic | 55.0% |
| ACACCGGTGGCCGAAAAGCT+TGG | - | chr4.1:53854558-53854577 | MS.gene95758:CDS | 60.0% | |
| ACCGGTGTCTCCGCCGAAAA+AGG | + | chr4.1:53854546-53854565 | None:intergenic | 60.0% | |
| CCGGTGTCTCCGCCGAAAAA+GGG | + | chr4.1:53854545-53854564 | None:intergenic | 60.0% | |
| CCTTGTTACGGCGGAGACAC+CGG | - | chr4.1:53854413-53854432 | MS.gene95758:CDS | 60.0% | |
| CGCTGCTGCAATTCAGTGGG+TGG | + | chr4.1:53858033-53858052 | None:intergenic | 60.0% | |
| GATGTTCCTGCGGGGATCCA+AGG | - | chr4.1:53857250-53857269 | MS.gene95758:intron | 60.0% | |
| GATTTGGCCCCCTCTTCGAC+TGG | + | chr4.1:53856607-53856626 | None:intergenic | 60.0% | |
| GCCGTAACAAGGTTCGGGTC+AGG | + | chr4.1:53854405-53854424 | None:intergenic | 60.0% | |
| GGAGAGGATGGCGACCTTCA+AGG | - | chr4.1:53858139-53858158 | MS.gene95758:CDS | 60.0% | |
| GGCTGCTGCAGGTGCATTAG+GGG | + | chr4.1:53857572-53857591 | None:intergenic | 60.0% | |
| GGCTGTGGCTGCTGTGGAAA+TGG | + | chr4.1:53857730-53857749 | None:intergenic | 60.0% | |
| GTGGCTGCTGCAGGTGCATT+AGG | + | chr4.1:53857574-53857593 | None:intergenic | 60.0% | |
| TGCTGCAGGTGCATTAGGGG+CGG | + | chr4.1:53857569-53857588 | None:intergenic | 60.0% | |
| TGTTCCTGCGGGGATCCAAG+GGG | - | chr4.1:53857252-53857271 | MS.gene95758:intron | 60.0% | |
| TTTGGAGGCAGGGAAGGCTG+TGG | + | chr4.1:53857745-53857764 | None:intergenic | 60.0% | |
| ! | CCATCATTTCGTGGTGCCGG+CGG | - | chr4.1:53858117-53858136 | MS.gene95758:CDS | 60.0% |
| !! | CATCATTTCGTGGTGCCGGC+GGG | - | chr4.1:53858118-53858137 | MS.gene95758:CDS | 60.0% |
| !! | TTTTTCGGCGGAGACACCGG+TGG | - | chr4.1:53854545-53854564 | MS.gene95758:CDS | 60.0% |
| !!! | CCCTTTTTCGGCGGAGACAC+CGG | - | chr4.1:53854542-53854561 | MS.gene95758:CDS | 60.0% |
| AGGGAAGGCTGTGGCTGCTG+TGG | + | chr4.1:53857736-53857755 | None:intergenic | 65.0% | |
| CCGCCGGCACCACGAAATGA+TGG | + | chr4.1:53858120-53858139 | None:intergenic | 65.0% | |
| CCGGTGTCTCCGCCGTAACA+AGG | + | chr4.1:53854416-53854435 | None:intergenic | 65.0% | |
| CTTAGCCCCTCTTCCACCGG+TGG | - | chr4.1:53856040-53856059 | MS.gene95758:intron | 65.0% | |
| GCAGGTGCATTAGGGGCGGT+AGG | + | chr4.1:53857565-53857584 | None:intergenic | 65.0% | |
| GGGCTTAGCCCCTCTTCCAC+CGG | - | chr4.1:53856037-53856056 | MS.gene95758:intron | 65.0% | |
| GTTCCTGCGGGGATCCAAGG+GGG | - | chr4.1:53857253-53857272 | MS.gene95758:intron | 65.0% | |
| AGGTCGCCATCCTCTCCCGC+CGG | + | chr4.1:53858136-53858155 | None:intergenic | 70.0% | |
| GTTCCCCCTTGGATCCCCGC+AGG | + | chr4.1:53857259-53857278 | None:intergenic | 70.0% | |
| !! | TTTCGTGGTGCCGGCGGGAG+AGG | - | chr4.1:53858123-53858142 | MS.gene95758:CDS | 70.0% |
| !! | GTGGTGCCGGCGGGAGAGGA+TGG | - | chr4.1:53858127-53858146 | MS.gene95758:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 53854372 | 53858164 | 53854372 | ID=MS.gene95758 |
| chr4.1 | mRNA | 53854372 | 53858164 | 53854372 | ID=MS.gene95758.t1;Parent=MS.gene95758 |
| chr4.1 | exon | 53857607 | 53858164 | 53857607 | ID=MS.gene95758.t1.exon1;Parent=MS.gene95758.t1 |
| chr4.1 | CDS | 53857607 | 53858164 | 53857607 | ID=cds.MS.gene95758.t1;Parent=MS.gene95758.t1 |
| chr4.1 | exon | 53856912 | 53856989 | 53856912 | ID=MS.gene95758.t1.exon2;Parent=MS.gene95758.t1 |
| chr4.1 | CDS | 53856912 | 53856989 | 53856912 | ID=cds.MS.gene95758.t1;Parent=MS.gene95758.t1 |
| chr4.1 | exon | 53854372 | 53855451 | 53854372 | ID=MS.gene95758.t1.exon3;Parent=MS.gene95758.t1 |
| chr4.1 | CDS | 53854372 | 53855451 | 53854372 | ID=cds.MS.gene95758.t1;Parent=MS.gene95758.t1 |
| Gene Sequence |
| Protein sequence |
