Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75579.t1 | XP_003601821.1 | 96.6 | 618 | 19 | 1 | 1 | 618 | 1 | 616 | 0.00E+00 | 1198.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75579.t1 | Q14181 | 35.6 | 390 | 209 | 7 | 217 | 602 | 223 | 574 | 5.0e-63 | 243.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75579.t1 | G7JC29 | 96.6 | 618 | 19 | 1 | 1 | 618 | 1 | 616 | 0.0e+00 | 1198.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049251 | MS.gene75579 | 0.827105 | 1.88E-54 | -1.69E-46 |
| MS.gene049397 | MS.gene75579 | 0.830389 | 3.02E-55 | -1.69E-46 |
| MS.gene049596 | MS.gene75579 | 0.886195 | 4.22E-72 | -1.69E-46 |
| MS.gene04985 | MS.gene75579 | 0.826544 | 2.56E-54 | -1.69E-46 |
| MS.gene049989 | MS.gene75579 | 0.895733 | 7.24E-76 | -1.69E-46 |
| MS.gene050009 | MS.gene75579 | 0.800712 | 1.27E-48 | -1.69E-46 |
| MS.gene050071 | MS.gene75579 | 0.820279 | 7.46E-53 | -1.69E-46 |
| MS.gene050297 | MS.gene75579 | 0.902402 | 1.01E-78 | -1.69E-46 |
| MS.gene050648 | MS.gene75579 | 0.821211 | 4.55E-53 | -1.69E-46 |
| MS.gene051094 | MS.gene75579 | 0.811638 | 6.33E-51 | -1.69E-46 |
| MS.gene05124 | MS.gene75579 | 0.888032 | 8.46E-73 | -1.69E-46 |
| MS.gene051423 | MS.gene75579 | 0.80879 | 2.60E-50 | -1.69E-46 |
| MS.gene051629 | MS.gene75579 | 0.817221 | 3.69E-52 | -1.69E-46 |
| MS.gene051742 | MS.gene75579 | 0.821153 | 4.70E-53 | -1.69E-46 |
| MS.gene051816 | MS.gene75579 | 0.80915 | 2.18E-50 | -1.69E-46 |
| MS.gene051914 | MS.gene75579 | 0.80658 | 7.68E-50 | -1.69E-46 |
| MS.gene051955 | MS.gene75579 | 0.831393 | 1.71E-55 | -1.69E-46 |
| MS.gene052143 | MS.gene75579 | 0.832154 | 1.11E-55 | -1.69E-46 |
| MS.gene052308 | MS.gene75579 | 0.827693 | 1.36E-54 | -1.69E-46 |
| MS.gene052367 | MS.gene75579 | 0.88688 | 2.33E-72 | -1.69E-46 |
| MS.gene053173 | MS.gene75579 | 0.890902 | 6.47E-74 | -1.69E-46 |
| MS.gene053348 | MS.gene75579 | 0.836699 | 8.03E-57 | -1.69E-46 |
| MS.gene053416 | MS.gene75579 | 0.891101 | 5.40E-74 | -1.69E-46 |
| MS.gene053417 | MS.gene75579 | 0.891101 | 5.40E-74 | -1.69E-46 |
| MS.gene05369 | MS.gene75579 | 0.812538 | 4.03E-51 | -1.69E-46 |
| MS.gene054459 | MS.gene75579 | 0.830989 | 2.15E-55 | -1.69E-46 |
| MS.gene054551 | MS.gene75579 | 0.874647 | 5.74E-68 | -1.69E-46 |
| MS.gene054552 | MS.gene75579 | 0.818798 | 1.62E-52 | -1.69E-46 |
| MS.gene054593 | MS.gene75579 | 0.841119 | 5.77E-58 | -1.69E-46 |
| MS.gene054633 | MS.gene75579 | 0.839379 | 1.64E-57 | -1.69E-46 |
| MS.gene054643 | MS.gene75579 | 0.85525 | 7.16E-62 | -1.69E-46 |
| MS.gene054662 | MS.gene75579 | 0.823375 | 1.43E-53 | -1.69E-46 |
| MS.gene055308 | MS.gene75579 | 0.829081 | 6.29E-55 | -1.69E-46 |
| MS.gene055411 | MS.gene75579 | 0.8424 | 2.65E-58 | -1.69E-46 |
| MS.gene055578 | MS.gene75579 | 0.849205 | 3.75E-60 | -1.69E-46 |
| MS.gene055957 | MS.gene75579 | 0.847783 | 9.29E-60 | -1.69E-46 |
| MS.gene056041 | MS.gene75579 | 0.871887 | 4.85E-67 | -1.69E-46 |
| MS.gene05640 | MS.gene75579 | 0.873775 | 1.13E-67 | -1.69E-46 |
| MS.gene056526 | MS.gene75579 | 0.869852 | 2.27E-66 | -1.69E-46 |
| MS.gene05732 | MS.gene75579 | 0.837279 | 5.71E-57 | -1.69E-46 |
| MS.gene057367 | MS.gene75579 | 0.802336 | 5.89E-49 | -1.69E-46 |
| MS.gene057458 | MS.gene75579 | 0.837225 | 5.89E-57 | -1.69E-46 |
| MS.gene057483 | MS.gene75579 | 0.812166 | 4.86E-51 | -1.69E-46 |
| MS.gene058196 | MS.gene75579 | 0.801792 | 7.62E-49 | -1.69E-46 |
| MS.gene058818 | MS.gene75579 | 0.874895 | 4.72E-68 | -1.69E-46 |
| MS.gene058827 | MS.gene75579 | 0.816713 | 4.80E-52 | -1.69E-46 |
| MS.gene058844 | MS.gene75579 | 0.847987 | 8.17E-60 | -1.69E-46 |
| MS.gene059300 | MS.gene75579 | 0.830856 | 2.32E-55 | -1.69E-46 |
| MS.gene059304 | MS.gene75579 | 0.805647 | 1.21E-49 | -1.69E-46 |
| MS.gene059553 | MS.gene75579 | 0.82966 | 4.54E-55 | -1.69E-46 |
| MS.gene060473 | MS.gene75579 | 0.882872 | 7.24E-71 | -1.69E-46 |
| MS.gene060565 | MS.gene75579 | 0.874757 | 5.26E-68 | -1.69E-46 |
| MS.gene06057 | MS.gene75579 | 0.851978 | 6.24E-61 | -1.69E-46 |
| MS.gene06093 | MS.gene75579 | 0.880311 | 6.09E-70 | -1.69E-46 |
| MS.gene061099 | MS.gene75579 | 0.859578 | 3.75E-63 | -1.69E-46 |
| MS.gene061260 | MS.gene75579 | 0.914759 | 1.31E-84 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75579.t1 | MTR_3g085750 | 97.249 | 618 | 15 | 1 | 1 | 618 | 1 | 616 | 0.0 | 1232 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75579.t1 | AT1G67630 | 59.554 | 628 | 230 | 13 | 3 | 618 | 5 | 620 | 0.0 | 737 |
Find 156 sgRNAs with CRISPR-Local
Find 348 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAAATTAACGCTTCAATTT+TGG | 0.120706 | 3.3:-71557565 | MS.gene75579:CDS |
| ACCTTTGTTGGTTAAGAATA+TGG | 0.169825 | 3.3:+71558245 | None:intergenic |
| ACAGTTCCTTTCTTGATGTC+TGG | 0.222575 | 3.3:+71559222 | None:intergenic |
| GGAAGATTATGTAGAAAGTA+TGG | 0.230887 | 3.3:-71559062 | MS.gene75579:CDS |
| TCCCCTTTGGCTAATCTTCC+CGG | 0.246702 | 3.3:+71557633 | None:intergenic |
| GGCTAATCTTCCCGGATTTA+CGG | 0.274662 | 3.3:+71557641 | None:intergenic |
| ACCATACCTGACGTAGAAAA+TGG | 0.283304 | 3.3:-71561635 | MS.gene75579:CDS |
| TTGCCTAGTTGCATCTAAAT+TGG | 0.287998 | 3.3:-71559948 | MS.gene75579:CDS |
| GGGAAGCTTATTATCTTAAC+AGG | 0.298972 | 3.3:-71562729 | MS.gene75579:intron |
| CAGTTCCTTTCTTGATGTCT+GGG | 0.299498 | 3.3:+71559223 | None:intergenic |
| GATAACAATATTACCTTTGT+TGG | 0.312625 | 3.3:+71558233 | None:intergenic |
| AAATTGTCTGTTGTAGTAAA+AGG | 0.318473 | 3.3:+71559471 | None:intergenic |
| GATATTATTAAGGAGGAAAC+TGG | 0.336739 | 3.3:-71562437 | MS.gene75579:CDS |
| TCTTGATAGGTAGTTGGAAT+TGG | 0.343246 | 3.3:-71559992 | MS.gene75579:intron |
| AGATGTTCATTGGTGATTCA+TGG | 0.343466 | 3.3:-71561539 | MS.gene75579:CDS |
| TTCTCCTTGTACCATCTATA+CGG | 0.343514 | 3.3:-71559024 | MS.gene75579:CDS |
| TCATTTGCCTCGAAGATTCC+AGG | 0.346489 | 3.3:+71558723 | None:intergenic |
| ACGATTATTCGTTGGTGTGC+TGG | 0.356878 | 3.3:+71561790 | None:intergenic |
| CTCAACAGTATTGAGCATTC+TGG | 0.364573 | 3.3:-71560160 | MS.gene75579:intron |
| TCAATAGCTTGCTTCTTTGA+AGG | 0.383809 | 3.3:+71559884 | None:intergenic |
| ATCTGGAAAGCCGGCTGATC+TGG | 0.384813 | 3.3:-71561711 | MS.gene75579:CDS |
| TGTGAAAGAAGATATTATTA+AGG | 0.385269 | 3.3:-71562447 | MS.gene75579:CDS |
| GAAATGCATTGCCGTAAATC+CGG | 0.385667 | 3.3:-71557652 | MS.gene75579:CDS |
| AATTGTACAAAATGCTGAAA+TGG | 0.396052 | 3.3:-71562498 | MS.gene75579:CDS |
| ATGAATCTGCAACCTGGTTT+CGG | 0.400151 | 3.3:+71561509 | None:intergenic |
| CATGATACACCATCTTTGTA+TGG | 0.412009 | 3.3:-71561746 | MS.gene75579:CDS |
| GACCAGGGAAAACTGAATAA+TGG | 0.412886 | 3.3:+71560101 | None:intergenic |
| GGCAATGCATTTCATGCTGT+TGG | 0.417412 | 3.3:+71557662 | None:intergenic |
| AGTGCCTCCGCCTTCCCCTT+TGG | 0.417625 | 3.3:+71557620 | None:intergenic |
| GGGTGTTCAGAATCAATAAA+TGG | 0.419793 | 3.3:+71559243 | None:intergenic |
| ACCACCACAGTTGCTTGTAT+TGG | 0.422824 | 3.3:-71559403 | MS.gene75579:intron |
| GAAGGTAAGATAAGAACATC+TGG | 0.423937 | 3.3:+71558050 | None:intergenic |
| GCAAGAGCACTTGTAGCCTC+TGG | 0.425289 | 3.3:-71561354 | MS.gene75579:CDS |
| TGAGCCTCTTGTAGAACTGC+TGG | 0.428718 | 3.3:-71559442 | MS.gene75579:CDS |
| GTTGCAGATTCATGTATGAT+AGG | 0.430713 | 3.3:-71561499 | MS.gene75579:CDS |
| TCATTGGTGATTCATGGATC+AGG | 0.431928 | 3.3:-71561533 | MS.gene75579:CDS |
| CTTCCGATCTCGTCTCAAGC+TGG | 0.441376 | 3.3:-71562750 | MS.gene75579:CDS |
| TGGTTAGCATCCCGTATAGA+TGG | 0.442734 | 3.3:+71559013 | None:intergenic |
| CTGGAACCAGTGATAGTTGA+AGG | 0.442918 | 3.3:+71558069 | None:intergenic |
| CGATTATTCGTTGGTGTGCT+GGG | 0.444015 | 3.3:+71561791 | None:intergenic |
| AGTCTGTCATGTTGCAGAGC+AGG | 0.444572 | 3.3:-71561023 | MS.gene75579:intron |
| TGCAACTAGGCAATGCCCAC+TGG | 0.447205 | 3.3:+71559958 | None:intergenic |
| AAAGATGGTGTATCATGTAT+AGG | 0.449011 | 3.3:+71561752 | None:intergenic |
| CCTAGTTGCATCTAAATTGG+TGG | 0.449877 | 3.3:-71559945 | MS.gene75579:CDS |
| TATCAGTCAACCTCAGGTTC+AGG | 0.450068 | 3.3:-71558871 | MS.gene75579:intron |
| GTAGAACTTGATTATGGTGG+GGG | 0.452701 | 3.3:-71557594 | MS.gene75579:CDS |
| AGTGATAGTTGAAGGGCTTC+TGG | 0.456035 | 3.3:+71558077 | None:intergenic |
| GCTTCATCTTGATAGGTAGT+TGG | 0.458139 | 3.3:-71559998 | MS.gene75579:intron |
| TTCTTCTTCGAAATCGAACT+CGG | 0.459596 | 3.3:+71562923 | None:intergenic |
| ATAGCCAGTCTCACTAATCC+TGG | 0.463280 | 3.3:-71558741 | MS.gene75579:CDS |
| GTATGATAGGACTGAGGATA+AGG | 0.465764 | 3.3:-71561486 | MS.gene75579:intron |
| TGTTTCTTACTCACCTGACC+AGG | 0.466872 | 3.3:+71560085 | None:intergenic |
| TGAAGGATTCAAATCCTCCT+TGG | 0.470306 | 3.3:+71559901 | None:intergenic |
| CAAAGTTGGTTGCTGCACTT+TGG | 0.478945 | 3.3:-71558353 | MS.gene75579:CDS |
| AAGTCTACTCAAGCGATCAA+TGG | 0.478977 | 3.3:+71558273 | None:intergenic |
| TTGTAGAACTTGATTATGGT+GGG | 0.480907 | 3.3:-71557596 | MS.gene75579:CDS |
| AAAGAAGCAAGCTATTGATA+AGG | 0.484721 | 3.3:-71559879 | MS.gene75579:CDS |
| TTCCGATCTCGTCTCAAGCT+GGG | 0.494489 | 3.3:-71562749 | MS.gene75579:CDS |
| ACCGGCGGAAAGTGTTCCCT+TGG | 0.495193 | 3.3:-71558114 | MS.gene75579:CDS |
| GAATAATCAAAATCTTCAAA+TGG | 0.497969 | 3.3:+71557542 | None:intergenic |
| TGTAGAACTTGATTATGGTG+GGG | 0.499548 | 3.3:-71557595 | MS.gene75579:CDS |
| AGTCTACTCAAGCGATCAAT+GGG | 0.502076 | 3.3:+71558274 | None:intergenic |
| TCAAGAAAGGAACTGTGGAC+AGG | 0.503637 | 3.3:-71559215 | MS.gene75579:CDS |
| CACTAATCCTGGAATCTTCG+AGG | 0.503927 | 3.3:-71558730 | MS.gene75579:CDS |
| TGATTACAAAGCAGTTCAGT+TGG | 0.504508 | 3.3:+71559848 | None:intergenic |
| TGATAGGTAGTTGGAATTGG+AGG | 0.506513 | 3.3:-71559989 | MS.gene75579:intron |
| ATTGGGTTTCAGGTCAAAGT+TGG | 0.506776 | 3.3:-71558367 | MS.gene75579:intron |
| AAATGCATTGCCGTAAATCC+GGG | 0.513156 | 3.3:-71557651 | MS.gene75579:CDS |
| CTTTCCGCCGGTGGATAAAG+TGG | 0.513297 | 3.3:+71558125 | None:intergenic |
| AGATTGATGCTATAGAAAAC+CGG | 0.517344 | 3.3:-71561389 | MS.gene75579:CDS |
| CTCACCGGTGAGGCAATTGA+AGG | 0.519073 | 3.3:+71561309 | None:intergenic |
| ATTTGATATCAGTCAACCTC+AGG | 0.519886 | 3.3:-71558877 | MS.gene75579:CDS |
| GATTCCAGGATTAGTGAGAC+TGG | 0.520895 | 3.3:+71558737 | None:intergenic |
| GGCTTAAACGTTGCAAGTCA+AGG | 0.521145 | 3.3:+71560122 | None:intergenic |
| AGACCCTTCAATTGCCTCAC+CGG | 0.521579 | 3.3:-71561313 | MS.gene75579:intron |
| AAAATATTTCCATACAAAGA+TGG | 0.522271 | 3.3:+71561737 | None:intergenic |
| CCACCAATTTAGATGCAACT+AGG | 0.524122 | 3.3:+71559945 | None:intergenic |
| TTTGTAGAACTTGATTATGG+TGG | 0.526857 | 3.3:-71557597 | MS.gene75579:CDS |
| TTTCTATCCACTTTATCCAC+CGG | 0.527556 | 3.3:-71558132 | MS.gene75579:CDS |
| CATGGATCAGGGCCGAAACC+AGG | 0.528621 | 3.3:-71561521 | MS.gene75579:CDS |
| ATCCGGGAAGATTAGCCAAA+GGG | 0.530400 | 3.3:-71557635 | MS.gene75579:CDS |
| TACAAAATGCTGAAATGGAA+GGG | 0.533300 | 3.3:-71562493 | MS.gene75579:CDS |
| GAAGATTATGTAGAAAGTAT+GGG | 0.533403 | 3.3:-71559061 | MS.gene75579:CDS |
| AGAAGCCCTTCAACTATCAC+TGG | 0.534874 | 3.3:-71558075 | MS.gene75579:CDS |
| GGTTTGCATCTTTATTCCAT+CGG | 0.535724 | 3.3:-71562416 | MS.gene75579:CDS |
| GTACAAAATGCTGAAATGGA+AGG | 0.538126 | 3.3:-71562494 | MS.gene75579:CDS |
| CAAGAGCACTTGTAGCCTCT+GGG | 0.540735 | 3.3:-71561353 | MS.gene75579:CDS |
| CATTGGTGATTCATGGATCA+GGG | 0.542239 | 3.3:-71561532 | MS.gene75579:CDS |
| CAGCTTGAGACGAGATCGGA+AGG | 0.546989 | 3.3:+71562751 | None:intergenic |
| TTACCTTGACAAAGTACTTG+AGG | 0.548405 | 3.3:+71558024 | None:intergenic |
| ACATCTTGACGATTATTCGT+TGG | 0.552885 | 3.3:+71561782 | None:intergenic |
| CAAGAAAGGAACTGTGGACA+GGG | 0.552995 | 3.3:-71559214 | MS.gene75579:CDS |
| GCTTAACAGATTATTGCGGC+TGG | 0.557278 | 3.3:-71559495 | MS.gene75579:intron |
| GCAACTAGGCAATGCCCACT+GGG | 0.559407 | 3.3:+71559959 | None:intergenic |
| TTACATTTCTACATCTCCGA+TGG | 0.560768 | 3.3:+71562400 | None:intergenic |
| GAGGCAATTGAAGGGTCTGT+TGG | 0.561516 | 3.3:+71561318 | None:intergenic |
| GATAGGTAGTTGGAATTGGA+GGG | 0.567631 | 3.3:-71559988 | MS.gene75579:intron |
| ACAAAGTACTTGAGGTCTGA+AGG | 0.568129 | 3.3:+71558032 | None:intergenic |
| GCTTGAGACGAGATCGGAAG+GGG | 0.570414 | 3.3:+71562753 | None:intergenic |
| AAGGGTGTAACCAGATCAGC+CGG | 0.571145 | 3.3:+71561701 | None:intergenic |
| GGAAGATTAGCCAAAGGGGA+AGG | 0.572359 | 3.3:-71557630 | MS.gene75579:CDS |
| GAACACCCAGACATCAAGAA+AGG | 0.575115 | 3.3:-71559228 | MS.gene75579:CDS |
| GGTGATATTTGACAGACAGC+TGG | 0.575422 | 3.3:-71562528 | MS.gene75579:intron |
| GGGCAGGTTCTTGATAATGA+AGG | 0.576740 | 3.3:-71557693 | MS.gene75579:intron |
| ACCATATTCTTAACCAACAA+AGG | 0.577604 | 3.3:-71558246 | MS.gene75579:intron |
| AAGGGAACACTTTCCGCCGG+TGG | 0.577945 | 3.3:+71558116 | None:intergenic |
| CAAATCCTCCTTGGCAACAG+AGG | 0.580356 | 3.3:+71559910 | None:intergenic |
| CATCCCGTATAGATGGTACA+AGG | 0.581719 | 3.3:+71559020 | None:intergenic |
| TTAGCCAAAGGGGAAGGCGG+AGG | 0.582827 | 3.3:-71557624 | MS.gene75579:CDS |
| TAATCAGAGAGAGTTATCAA+TGG | 0.583256 | 3.3:-71559831 | MS.gene75579:intron |
| GAAAGAAGATATTATTAAGG+AGG | 0.584316 | 3.3:-71562444 | MS.gene75579:CDS |
| TATACCTACCTCTGTTGCCA+AGG | 0.585658 | 3.3:-71559918 | MS.gene75579:CDS |
| TCGTTTGGAAGTCTTGAGGA+AGG | 0.590862 | 3.3:-71559175 | MS.gene75579:intron |
| ATGATTTGTTGTGACGGAGA+AGG | 0.595013 | 3.3:-71561060 | MS.gene75579:CDS |
| TTCCCAGCTTGAGACGAGAT+CGG | 0.595051 | 3.3:+71562747 | None:intergenic |
| CTTAAATGATGATGATACAA+AGG | 0.596367 | 3.3:-71561822 | MS.gene75579:CDS |
| TCCAAGGGAACACTTTCCGC+CGG | 0.598815 | 3.3:+71558113 | None:intergenic |
| AGACCTCAAGTACTTTGTCA+AGG | 0.598942 | 3.3:-71558027 | MS.gene75579:intron |
| GATGTTCTCAAACAGATCAG+TGG | 0.599730 | 3.3:-71558331 | MS.gene75579:CDS |
| AACAGTATTGAGCATTCTGG+AGG | 0.602568 | 3.3:-71560157 | MS.gene75579:intron |
| TCTCCTTGTACCATCTATAC+GGG | 0.603113 | 3.3:-71559023 | MS.gene75579:CDS |
| TGGAATCTTCGAGGCAAATG+AGG | 0.605385 | 3.3:-71558721 | MS.gene75579:intron |
| GTTGGCATGATTTGTTGTGA+CGG | 0.611041 | 3.3:-71561066 | MS.gene75579:CDS |
| TTGTGCTTAACAGATTATTG+CGG | 0.613642 | 3.3:-71559499 | MS.gene75579:intron |
| AAAACGGACAGATAGGTTCG+CGG | 0.616408 | 3.3:-71561675 | MS.gene75579:CDS |
| AATCATTATACCTGAACCTG+AGG | 0.618102 | 3.3:+71558861 | None:intergenic |
| CTATCCACTTTATCCACCGG+CGG | 0.618588 | 3.3:-71558129 | MS.gene75579:CDS |
| TCATACATGAATCTGCAACC+TGG | 0.619077 | 3.3:+71561503 | None:intergenic |
| TATTTCGTTTGGAAGTCTTG+AGG | 0.620552 | 3.3:-71559179 | MS.gene75579:CDS |
| AGATTAGCCAAAGGGGAAGG+CGG | 0.622219 | 3.3:-71557627 | MS.gene75579:CDS |
| TCCTCCTTGGCAACAGAGGT+AGG | 0.626834 | 3.3:+71559914 | None:intergenic |
| GGTTGACTGATATCAAATGC+AGG | 0.627114 | 3.3:+71558882 | None:intergenic |
| ACAGTATTGAGCATTCTGGA+GGG | 0.629176 | 3.3:-71560156 | MS.gene75579:intron |
| TGGCGCCAGAGAAAAGTCCA+AGG | 0.629197 | 3.3:+71558097 | None:intergenic |
| TATGCCAGCAGTTCTACAAG+AGG | 0.630430 | 3.3:+71559438 | None:intergenic |
| TCACCGGTGAGGCAATTGAA+GGG | 0.633226 | 3.3:+71561310 | None:intergenic |
| TGGAACCAGTGATAGTTGAA+GGG | 0.633289 | 3.3:+71558070 | None:intergenic |
| GTCACAACAAATCATGCCAA+CGG | 0.639149 | 3.3:+71561068 | None:intergenic |
| ACCTACCTCTGTTGCCAAGG+AGG | 0.641588 | 3.3:-71559915 | MS.gene75579:CDS |
| TGACAGACTTCTCATTAAGA+CGG | 0.641870 | 3.3:+71561037 | None:intergenic |
| AGCTTGAGACGAGATCGGAA+GGG | 0.646335 | 3.3:+71562752 | None:intergenic |
| GTTTCTTACTCACCTGACCA+GGG | 0.649699 | 3.3:+71560086 | None:intergenic |
| AATCCGGGAAGATTAGCCAA+AGG | 0.655765 | 3.3:-71557636 | MS.gene75579:CDS |
| TTGGAGGGCATAATCCCAGT+GGG | 0.659819 | 3.3:-71559973 | MS.gene75579:CDS |
| GGCGCCAGAGAAAAGTCCAA+GGG | 0.665377 | 3.3:+71558098 | None:intergenic |
| TCCGGGAAGATTAGCCAAAG+GGG | 0.672422 | 3.3:-71557634 | MS.gene75579:CDS |
| CAGTATTGAGCATTCTGGAG+GGG | 0.672798 | 3.3:-71560155 | MS.gene75579:CDS |
| ATTACCAATACAAGCAACTG+TGG | 0.673094 | 3.3:+71559399 | None:intergenic |
| ACCAATACAAGCAACTGTGG+TGG | 0.685489 | 3.3:+71559402 | None:intergenic |
| AGACATCAAGAAAGGAACTG+TGG | 0.690973 | 3.3:-71559220 | MS.gene75579:CDS |
| ATGCATTAAACTCACCGGTG+AGG | 0.691949 | 3.3:+71561299 | None:intergenic |
| TCTCAAACAGATCAGTGGAG+AGG | 0.700393 | 3.3:-71558326 | MS.gene75579:CDS |
| TGGTTCTTCATAGAGCCCAG+AGG | 0.708216 | 3.3:+71561338 | None:intergenic |
| ATTGGAGGGCATAATCCCAG+TGG | 0.710140 | 3.3:-71559974 | MS.gene75579:CDS |
| ATTCATGTATGATAGGACTG+AGG | 0.726348 | 3.3:-71561492 | MS.gene75579:CDS |
| TTAAACGTTGCAAGTCAAGG+CGG | 0.749759 | 3.3:+71560125 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCATAATTAAAAGTTATAA+CGG | - | chr3.3:71560489-71560508 | MS.gene75579:intron | 10.0% |
| !! | CAATTTAATGAATAAATAAA+AGG | + | chr3.3:71558393-71558412 | None:intergenic | 10.0% |
| !!! | CATAAATTTGTTTTTTAATA+TGG | - | chr3.3:71560325-71560344 | MS.gene75579:intron | 10.0% |
| !!! | TTTTTTAATTTTTTTCTTAC+TGG | + | chr3.3:71560009-71560028 | None:intergenic | 10.0% |
| !! | AACATTTATAAATGATTTAC+TGG | - | chr3.3:71562800-71562819 | MS.gene75579:intron | 15.0% |
| !! | AAGAAACAAATGATAATTAT+AGG | - | chr3.3:71562080-71562099 | MS.gene75579:intron | 15.0% |
| !! | ACATTTATAAATGATTTACT+GGG | - | chr3.3:71562801-71562820 | MS.gene75579:intron | 15.0% |
| !! | ATGTATGTATGAAAAATATA+TGG | + | chr3.3:71559535-71559554 | None:intergenic | 15.0% |
| !!! | ATAATGATTTTAAAGCATTT+AGG | - | chr3.3:71561667-71561686 | MS.gene75579:CDS | 15.0% |
| !!! | TTAACAAAATTTGTTTTTGT+TGG | - | chr3.3:71557939-71557958 | MS.gene75579:intron | 15.0% |
| !!! | TTAATTGTTGCAAAATTTTT+AGG | - | chr3.3:71557709-71557728 | MS.gene75579:intron | 15.0% |
| !! | AAAATATTTCCATACAAAGA+TGG | + | chr3.3:71558780-71558799 | None:intergenic | 20.0% |
| !! | AATTAATGTTGCCTTAATAA+TGG | - | chr3.3:71559892-71559911 | MS.gene75579:CDS | 20.0% |
| !! | ATCAACAAACAAATGTAAAA+GGG | + | chr3.3:71559087-71559106 | None:intergenic | 20.0% |
| !! | ATTTCATGCTAAAAAATGTT+TGG | + | chr3.3:71560119-71560138 | None:intergenic | 20.0% |
| !! | ATTTGCGTAAACTAAAATAA+TGG | + | chr3.3:71561572-71561591 | None:intergenic | 20.0% |
| !! | GAAAATTTACGATTTGAATT+TGG | - | chr3.3:71557961-71557980 | MS.gene75579:intron | 20.0% |
| !! | GAATATAAAAAAACCCATTA+TGG | + | chr3.3:71559732-71559751 | None:intergenic | 20.0% |
| !! | TAAGTTAAGATCCATTATTA+AGG | + | chr3.3:71559906-71559925 | None:intergenic | 20.0% |
| !! | TATCAACAAACAAATGTAAA+AGG | + | chr3.3:71559088-71559107 | None:intergenic | 20.0% |
| !! | TGATTGATTAATTAAGCAAA+AGG | + | chr3.3:71557655-71557674 | None:intergenic | 20.0% |
| !! | TGTGAAAGAAGATATTATTA+AGG | - | chr3.3:71558067-71558086 | MS.gene75579:CDS | 20.0% |
| !! | TTATAACCAAAAGTGAAAAT+AGG | - | chr3.3:71562651-71562670 | MS.gene75579:intron | 20.0% |
| !! | TTTAACATATGCATTAATTC+TGG | - | chr3.3:71559337-71559356 | MS.gene75579:intron | 20.0% |
| !! | TTTATTGTTGTATCTGTTAA+TGG | - | chr3.3:71558588-71558607 | MS.gene75579:intron | 20.0% |
| !!! | AATTAAAAGTTATAACGGAA+AGG | - | chr3.3:71560494-71560513 | MS.gene75579:intron | 20.0% |
| !!! | AATTGAAGCGTTAATTTTAT+CGG | + | chr3.3:71562948-71562967 | None:intergenic | 20.0% |
| !!! | AATTTTTAGCGAATAAATAC+TGG | - | chr3.3:71557846-71557865 | MS.gene75579:intron | 20.0% |
| !!! | ATGCATTTACATTTGAAATA+AGG | - | chr3.3:71558175-71558194 | MS.gene75579:intron | 20.0% |
| !!! | ATGTTGAAGGATATTTTTTT+AGG | - | chr3.3:71562006-71562025 | MS.gene75579:intron | 20.0% |
| !!! | TAAAATTAACGCTTCAATTT+TGG | - | chr3.3:71562949-71562968 | MS.gene75579:CDS | 20.0% |
| !!! | TCAGTCTATTTAATTTGATT+AGG | - | chr3.3:71559684-71559703 | MS.gene75579:intron | 20.0% |
| !!! | TTCTTTTTAATCACAATTAG+TGG | - | chr3.3:71561164-71561183 | MS.gene75579:intron | 20.0% |
| !!! | TTTTGATGAAATATTTCGTT+TGG | - | chr3.3:71561324-71561343 | MS.gene75579:CDS | 20.0% |
| ! | AAATGTGGAAGAAAATTATC+TGG | - | chr3.3:71558334-71558353 | MS.gene75579:CDS | 25.0% |
| ! | AAATTGTCTGTTGTAGTAAA+AGG | + | chr3.3:71561046-71561065 | None:intergenic | 25.0% |
| ! | AACAGAAATACAGTATGTAT+AGG | + | chr3.3:71560970-71560989 | None:intergenic | 25.0% |
| ! | AACATTCCAAAGTAAAACAA+TGG | + | chr3.3:71559761-71559780 | None:intergenic | 25.0% |
| ! | AACTAAGAACAAATACTCTT+AGG | - | chr3.3:71559652-71559671 | MS.gene75579:intron | 25.0% |
| ! | AAGAGCCAATAAGTAAAATT+TGG | + | chr3.3:71559290-71559309 | None:intergenic | 25.0% |
| ! | AATTGTACAAAATGCTGAAA+TGG | - | chr3.3:71558016-71558035 | MS.gene75579:intron | 25.0% |
| ! | ACACATTAGCAAACAAAAAA+TGG | + | chr3.3:71560717-71560736 | None:intergenic | 25.0% |
| ! | ACAGAAATACAGTATGTATA+GGG | + | chr3.3:71560969-71560988 | None:intergenic | 25.0% |
| ! | ACTAAGAACAAATACTCTTA+GGG | - | chr3.3:71559653-71559672 | MS.gene75579:intron | 25.0% |
| ! | AGATACTCTGTGTAAATATT+CGG | + | chr3.3:71558500-71558519 | None:intergenic | 25.0% |
| ! | ATGGATCTTAACTTAAATCT+TGG | - | chr3.3:71559911-71559930 | MS.gene75579:CDS | 25.0% |
| ! | ATTTACGATTTGAATTTGGA+CGG | - | chr3.3:71557965-71557984 | MS.gene75579:intron | 25.0% |
| ! | ATTTCATAACCATATGCTTA+TGG | + | chr3.3:71561913-71561932 | None:intergenic | 25.0% |
| ! | CACATTAGCAAACAAAAAAT+GGG | + | chr3.3:71560716-71560735 | None:intergenic | 25.0% |
| ! | GAAACTGACATAAAATTGAA+AGG | + | chr3.3:71562366-71562385 | None:intergenic | 25.0% |
| ! | GAAAGAAGATATTATTAAGG+AGG | - | chr3.3:71558070-71558089 | MS.gene75579:CDS | 25.0% |
| ! | GATAACAATATTACCTTTGT+TGG | + | chr3.3:71562284-71562303 | None:intergenic | 25.0% |
| ! | GCAAGTTCTTCAAATATTAT+CGG | - | chr3.3:71560938-71560957 | MS.gene75579:intron | 25.0% |
| ! | TATTGACAAATAAGAACTAG+AGG | + | chr3.3:71561955-71561974 | None:intergenic | 25.0% |
| ! | TCTTATCAAATCCAACATAT+TGG | + | chr3.3:71559593-71559612 | None:intergenic | 25.0% |
| ! | TGGATCTTAACTTAAATCTT+GGG | - | chr3.3:71559912-71559931 | MS.gene75579:CDS | 25.0% |
| ! | TGTTTAGACAAATACTCTTT+AGG | - | chr3.3:71559615-71559634 | MS.gene75579:intron | 25.0% |
| ! | TTAAAAAGAAAGATGTAGAC+TGG | + | chr3.3:71561154-71561173 | None:intergenic | 25.0% |
| !! | ACATTTCCTATTTTCACTTT+TGG | + | chr3.3:71562660-71562679 | None:intergenic | 25.0% |
| !! | ACTTTTGTAGAACTTGATTA+TGG | - | chr3.3:71562914-71562933 | MS.gene75579:CDS | 25.0% |
| !! | ATATAGTGTTGTTGAGTTAA+AGG | - | chr3.3:71558633-71558652 | MS.gene75579:intron | 25.0% |
| !! | ATGCATACTCATAATTTTGA+TGG | - | chr3.3:71559249-71559268 | MS.gene75579:CDS | 25.0% |
| !! | ATTTCAGCATTTTGTACAAT+TGG | + | chr3.3:71558017-71558036 | None:intergenic | 25.0% |
| !! | CTTAAATGATGATGATACAA+AGG | - | chr3.3:71558692-71558711 | MS.gene75579:intron | 25.0% |
| !! | GAAGATTATGTAGAAAGTAT+GGG | - | chr3.3:71561453-71561472 | MS.gene75579:intron | 25.0% |
| !! | TTGAAAATCAATTTTTCCAC+CGG | - | chr3.3:71560233-71560252 | MS.gene75579:intron | 25.0% |
| !!! | AAATTTTACTTATTGGCTCT+TGG | - | chr3.3:71559289-71559308 | MS.gene75579:intron | 25.0% |
| !!! | AAGTTTTTTGATCAAGGATT+GGG | - | chr3.3:71562130-71562149 | MS.gene75579:intron | 25.0% |
| !!! | ATTGAAGCGTTAATTTTATC+GGG | + | chr3.3:71562947-71562966 | None:intergenic | 25.0% |
| !!! | TATGGAAATATTTTAGCATC+TGG | - | chr3.3:71558786-71558805 | MS.gene75579:intron | 25.0% |
| !!! | TTTGGAATGTTGACTTATTT+AGG | - | chr3.3:71559770-71559789 | MS.gene75579:intron | 25.0% |
| AAAAACAACCTCAGAGAATA+TGG | - | chr3.3:71558472-71558491 | MS.gene75579:intron | 30.0% | |
| AAAGAAGCAAGCTATTGATA+AGG | - | chr3.3:71560635-71560654 | MS.gene75579:intron | 30.0% | |
| AAAGATGGTGTATCATGTAT+AGG | + | chr3.3:71558765-71558784 | None:intergenic | 30.0% | |
| AACCTATGTTTCATACCAAA+GGG | + | chr3.3:71558525-71558544 | None:intergenic | 30.0% | |
| ACCATATTCTTAACCAACAA+AGG | - | chr3.3:71562268-71562287 | MS.gene75579:intron | 30.0% | |
| AGATTGATGCTATAGAAAAC+CGG | - | chr3.3:71559125-71559144 | MS.gene75579:intron | 30.0% | |
| AGCAGAATATCTTTCACTAT+GGG | - | chr3.3:71561714-71561733 | MS.gene75579:CDS | 30.0% | |
| ATAGGTTGTTGATGCATATT+AGG | - | chr3.3:71558538-71558557 | MS.gene75579:intron | 30.0% | |
| ATGAGATTTATCATTACCTG+AGG | + | chr3.3:71561540-71561559 | None:intergenic | 30.0% | |
| ATTGAATGTTCTTTGCCTAA+GGG | - | chr3.3:71559371-71559390 | MS.gene75579:intron | 30.0% | |
| CAACATACTGTGTAATAGAA+TGG | + | chr3.3:71561992-71562011 | None:intergenic | 30.0% | |
| CTAAGAACAAATACTCTTAG+GGG | - | chr3.3:71559654-71559673 | MS.gene75579:intron | 30.0% | |
| GAAACATCGAGTTAAATTGT+AGG | - | chr3.3:71560446-71560465 | MS.gene75579:intron | 30.0% | |
| GACTCCATATTGTAATATCT+GGG | - | chr3.3:71561857-71561876 | MS.gene75579:intron | 30.0% | |
| GATATTATTAAGGAGGAAAC+TGG | - | chr3.3:71558077-71558096 | MS.gene75579:CDS | 30.0% | |
| GGAAGATTATGTAGAAAGTA+TGG | - | chr3.3:71561452-71561471 | MS.gene75579:intron | 30.0% | |
| GGATCTTAACTTAAATCTTG+GGG | - | chr3.3:71559913-71559932 | MS.gene75579:CDS | 30.0% | |
| GTGTGAATGCTTTATAGATT+TGG | + | chr3.3:71559954-71559973 | None:intergenic | 30.0% | |
| TAAGCCCAGATATTACAATA+TGG | + | chr3.3:71561864-71561883 | None:intergenic | 30.0% | |
| TAATCACAATTAGTGGCATA+GGG | - | chr3.3:71561171-71561190 | MS.gene75579:intron | 30.0% | |
| TAATCAGAGAGAGTTATCAA+TGG | - | chr3.3:71560683-71560702 | MS.gene75579:intron | 30.0% | |
| TACAAAATGCTGAAATGGAA+GGG | - | chr3.3:71558021-71558040 | MS.gene75579:intron | 30.0% | |
| TACTATCTTTAGTGCATGTT+TGG | - | chr3.3:71559796-71559815 | MS.gene75579:intron | 30.0% | |
| TAGCAGAATATCTTTCACTA+TGG | - | chr3.3:71561713-71561732 | MS.gene75579:CDS | 30.0% | |
| TATTAGTCAAATTTCCCCTT+AGG | + | chr3.3:71559389-71559408 | None:intergenic | 30.0% | |
| TATTTGAAGAACTTGCAATG+TGG | + | chr3.3:71560934-71560953 | None:intergenic | 30.0% | |
| TCTATTACACAGTATGTTGA+AGG | - | chr3.3:71561993-71562012 | MS.gene75579:intron | 30.0% | |
| TTAATCACAATTAGTGGCAT+AGG | - | chr3.3:71561170-71561189 | MS.gene75579:intron | 30.0% | |
| TTATAAATGATTTACTGGGC+AGG | - | chr3.3:71562805-71562824 | MS.gene75579:intron | 30.0% | |
| TTCTACATAATCTTCCAACT+GGG | + | chr3.3:71561448-71561467 | None:intergenic | 30.0% | |
| TTCTTGAACTTGTATCTGTT+GGG | - | chr3.3:71558413-71558432 | MS.gene75579:intron | 30.0% | |
| TTGAAAAGAAAACCAGTAAG+TGG | + | chr3.3:71562055-71562074 | None:intergenic | 30.0% | |
| TTGTAGAACTTGATTATGGT+GGG | - | chr3.3:71562918-71562937 | MS.gene75579:CDS | 30.0% | |
| TTGTGCTTAACAGATTATTG+CGG | - | chr3.3:71561015-71561034 | MS.gene75579:intron | 30.0% | |
| TTTCTACATAATCTTCCAAC+TGG | + | chr3.3:71561449-71561468 | None:intergenic | 30.0% | |
| TTTGTAGAACTTGATTATGG+TGG | - | chr3.3:71562917-71562936 | MS.gene75579:CDS | 30.0% | |
| ! | AAGCTATAAGAGGTATGTAA+TGG | + | chr3.3:71558302-71558321 | None:intergenic | 30.0% |
| ! | AATTGCATTTTATCTCAGCT+TGG | - | chr3.3:71561247-71561266 | MS.gene75579:intron | 30.0% |
| ! | ACCTTTGTTGGTTAAGAATA+TGG | + | chr3.3:71562272-71562291 | None:intergenic | 30.0% |
| ! | AGCTATAAGAGGTATGTAAT+GGG | + | chr3.3:71558301-71558320 | None:intergenic | 30.0% |
| ! | CCTAAAAAACTGCAGATTTT+CGG | + | chr3.3:71558219-71558238 | None:intergenic | 30.0% |
| ! | GAGCACCAAATTTTACTTAT+TGG | - | chr3.3:71559282-71559301 | MS.gene75579:intron | 30.0% |
| ! | TCACCAATGAACATCTTTTT+CGG | + | chr3.3:71558971-71558990 | None:intergenic | 30.0% |
| ! | TTTTGGATAACCAACTCTTA+TGG | - | chr3.3:71561823-71561842 | MS.gene75579:CDS | 30.0% |
| !! | TGTGATCCATTGTTTTACTT+TGG | - | chr3.3:71559752-71559771 | MS.gene75579:intron | 30.0% |
| !! | TGTTGTATGTATTGATTCTC+CGG | + | chr3.3:71560255-71560274 | None:intergenic | 30.0% |
| !! | TTTGTTATTTCCTGAATCTG+TGG | - | chr3.3:71562105-71562124 | MS.gene75579:intron | 30.0% |
| !!! | CTCTTGCATGTTTTTTAATC+CGG | + | chr3.3:71559147-71559166 | None:intergenic | 30.0% |
| !!! | GAAGTTTTTTGATCAAGGAT+TGG | - | chr3.3:71562129-71562148 | MS.gene75579:intron | 30.0% |
| !!! | TCTTTTTTCTTTCCACTTAC+TGG | - | chr3.3:71562040-71562059 | MS.gene75579:intron | 30.0% |
| !!! | TGTTTGGTTTTACATTTGAG+AGG | - | chr3.3:71559812-71559831 | MS.gene75579:intron | 30.0% |
| AAAAACTTCTCCACAGATTC+AGG | + | chr3.3:71562118-71562137 | None:intergenic | 35.0% | |
| AAGCCGAAAAAGATGTTCAT+TGG | - | chr3.3:71558965-71558984 | MS.gene75579:intron | 35.0% | |
| AATCATTATACCTGAACCTG+AGG | + | chr3.3:71561656-71561675 | None:intergenic | 35.0% | |
| AATGGATGCATTAAACTCAC+CGG | + | chr3.3:71559223-71559242 | None:intergenic | 35.0% | |
| AATTGAACAGTCACATGTGT+TGG | - | chr3.3:71560035-71560054 | MS.gene75579:intron | 35.0% | |
| ACATCTTGACGATTATTCGT+TGG | + | chr3.3:71558735-71558754 | None:intergenic | 35.0% | |
| AGAAAGATGTAGACTGGTAT+AGG | + | chr3.3:71561148-71561167 | None:intergenic | 35.0% | |
| AGATAGGATGTTACTGAGTT+AGG | + | chr3.3:71560853-71560872 | None:intergenic | 35.0% | |
| ATCAAACAAGCCATAAGAGT+TGG | + | chr3.3:71561836-71561855 | None:intergenic | 35.0% | |
| ATCCCTTTGGTATGAAACAT+AGG | - | chr3.3:71558520-71558539 | MS.gene75579:intron | 35.0% | |
| ATGAGTATGCATGAGAGAAA+TGG | + | chr3.3:71559241-71559260 | None:intergenic | 35.0% | |
| ATTACCAATACAAGCAACTG+TGG | + | chr3.3:71561118-71561137 | None:intergenic | 35.0% | |
| ATTCATGTATGATAGGACTG+AGG | - | chr3.3:71559022-71559041 | MS.gene75579:CDS | 35.0% | |
| ATTTGATATCAGTCAACCTC+AGG | - | chr3.3:71561637-71561656 | MS.gene75579:CDS | 35.0% | |
| CAACCTATGTTTCATACCAA+AGG | + | chr3.3:71558526-71558545 | None:intergenic | 35.0% | |
| CACTTCCTATGATTATTCCT+AGG | + | chr3.3:71560882-71560901 | None:intergenic | 35.0% | |
| CATGATACACCATCTTTGTA+TGG | - | chr3.3:71558768-71558787 | MS.gene75579:intron | 35.0% | |
| CATTGAATGTTCTTTGCCTA+AGG | - | chr3.3:71559370-71559389 | MS.gene75579:intron | 35.0% | |
| CCTGAGGAAAAACAAAATCA+TGG | + | chr3.3:71561524-71561543 | None:intergenic | 35.0% | |
| GAAGGTAAGATAAGAACATC+TGG | + | chr3.3:71562467-71562486 | None:intergenic | 35.0% | |
| GCATATTAGGATAGACTACT+AGG | - | chr3.3:71558551-71558570 | MS.gene75579:intron | 35.0% | |
| GGGAAGCTTATTATCTTAAC+AGG | - | chr3.3:71557785-71557804 | MS.gene75579:intron | 35.0% | |
| GGGTGTTCAGAATCAATAAA+TGG | + | chr3.3:71561274-71561293 | None:intergenic | 35.0% | |
| GGTTTGCATCTTTATTCCAT+CGG | - | chr3.3:71558098-71558117 | MS.gene75579:CDS | 35.0% | |
| GTACAAAATGCTGAAATGGA+AGG | - | chr3.3:71558020-71558039 | MS.gene75579:intron | 35.0% | |
| GTTCTTGAACTTGTATCTGT+TGG | - | chr3.3:71558412-71558431 | MS.gene75579:intron | 35.0% | |
| GTTGCAGATTCATGTATGAT+AGG | - | chr3.3:71559015-71559034 | MS.gene75579:CDS | 35.0% | |
| TATTTCGTTTGGAAGTCTTG+AGG | - | chr3.3:71561335-71561354 | MS.gene75579:CDS | 35.0% | |
| TCCAACATATTGGCAATAGA+TGG | + | chr3.3:71559583-71559602 | None:intergenic | 35.0% | |
| TCCATCTATTGCCAATATGT+TGG | - | chr3.3:71559579-71559598 | MS.gene75579:intron | 35.0% | |
| TCTTGATAGGTAGTTGGAAT+TGG | - | chr3.3:71560522-71560541 | MS.gene75579:intron | 35.0% | |
| TGACAGACTTCTCATTAAGA+CGG | + | chr3.3:71559480-71559499 | None:intergenic | 35.0% | |
| TGATGAAAATCCTTGTATGC+AGG | - | chr3.3:71558667-71558686 | MS.gene75579:intron | 35.0% | |
| TGATTACAAAGCAGTTCAGT+TGG | + | chr3.3:71560669-71560688 | None:intergenic | 35.0% | |
| TGTAGAACTTGATTATGGTG+GGG | - | chr3.3:71562919-71562938 | MS.gene75579:CDS | 35.0% | |
| TTACATTTCTACATCTCCGA+TGG | + | chr3.3:71558117-71558136 | None:intergenic | 35.0% | |
| TTCTCCTTGTACCATCTATA+CGG | - | chr3.3:71561490-71561509 | MS.gene75579:CDS | 35.0% | |
| TTCTTCTTCGAAATCGAACT+CGG | + | chr3.3:71557594-71557613 | None:intergenic | 35.0% | |
| TTGAATGTTCTTTGCCTAAG+GGG | - | chr3.3:71559372-71559391 | MS.gene75579:intron | 35.0% | |
| TTGCCTAGTTGCATCTAAAT+TGG | - | chr3.3:71560566-71560585 | MS.gene75579:intron | 35.0% | |
| TTTCTATCCACTTTATCCAC+CGG | - | chr3.3:71562382-71562401 | MS.gene75579:intron | 35.0% | |
| ! | AGATGTTCATTGGTGATTCA+TGG | - | chr3.3:71558975-71558994 | MS.gene75579:intron | 35.0% |
| ! | CATTTAAGATCCTGCATACA+AGG | + | chr3.3:71558680-71558699 | None:intergenic | 35.0% |
| ! | GTTTGTTGATACCTGATTAC+TGG | - | chr3.3:71559097-71559116 | MS.gene75579:intron | 35.0% |
| ! | TAGGTCTTATGTCAACTCAA+GGG | - | chr3.3:71559703-71559722 | MS.gene75579:intron | 35.0% |
| ! | TAGTGCAGAATTTAGTTTCC+AGG | + | chr3.3:71560743-71560762 | None:intergenic | 35.0% |
| ! | TGGTTACACCCTTTTCAAAA+CGG | - | chr3.3:71558823-71558842 | MS.gene75579:intron | 35.0% |
| ! | TGTTTGCTAATGTGTTATCC+TGG | - | chr3.3:71560722-71560741 | MS.gene75579:intron | 35.0% |
| ! | TGTTTTCCATTTTCTACGTC+AGG | + | chr3.3:71558888-71558907 | None:intergenic | 35.0% |
| ! | TTACCTTGACAAAGTACTTG+AGG | + | chr3.3:71562493-71562512 | None:intergenic | 35.0% |
| ! | TTAGGTCTTATGTCAACTCA+AGG | - | chr3.3:71559702-71559721 | MS.gene75579:intron | 35.0% |
| !! | TCAATAGCTTGCTTCTTTGA+AGG | + | chr3.3:71560633-71560652 | None:intergenic | 35.0% |
| !!! | CCATGATTTTGTTTTTCCTC+AGG | - | chr3.3:71561521-71561540 | MS.gene75579:CDS | 35.0% |
| !!! | CCGAAAATCTGCAGTTTTTT+AGG | - | chr3.3:71558216-71558235 | MS.gene75579:intron | 35.0% |
| !!! | CTAGCAGAATTTTTTGCAGA+AGG | + | chr3.3:71558360-71558379 | None:intergenic | 35.0% |
| !!! | CTATCTGTCCGTTTTGAAAA+GGG | + | chr3.3:71558834-71558853 | None:intergenic | 35.0% |
| !!! | GCAAATGAGGTATTGCATTT+TGG | - | chr3.3:71561806-71561825 | MS.gene75579:CDS | 35.0% |
| !!! | GTGGAGAAGTTTTTTGATCA+AGG | - | chr3.3:71562124-71562143 | MS.gene75579:intron | 35.0% |
| !!! | TATTTTAGCATCTGGAAAGC+CGG | - | chr3.3:71558794-71558813 | MS.gene75579:intron | 35.0% |
| AAATGCATTGCCGTAAATCC+GGG | - | chr3.3:71562863-71562882 | MS.gene75579:intron | 40.0% | |
| AACTCAAGGGATGCCATAAT+GGG | - | chr3.3:71559716-71559735 | MS.gene75579:intron | 40.0% | |
| AAGTCTACTCAAGCGATCAA+TGG | + | chr3.3:71562244-71562263 | None:intergenic | 40.0% | |
| ACAGTGATGCAAGCTATAAG+AGG | + | chr3.3:71558312-71558331 | None:intergenic | 40.0% | |
| ACAGTTCCTTTCTTGATGTC+TGG | + | chr3.3:71561295-71561314 | None:intergenic | 40.0% | |
| ACCATACCTGACGTAGAAAA+TGG | - | chr3.3:71558879-71558898 | MS.gene75579:CDS | 40.0% | |
| AGACATCAAGAAAGGAACTG+TGG | - | chr3.3:71561294-71561313 | MS.gene75579:intron | 40.0% | |
| AGACCTCAAGTACTTTGTCA+AGG | - | chr3.3:71562487-71562506 | MS.gene75579:CDS | 40.0% | |
| AGTCTACTCAAGCGATCAAT+GGG | + | chr3.3:71562243-71562262 | None:intergenic | 40.0% | |
| ATGAATCTGCAACCTGGTTT+CGG | + | chr3.3:71559008-71559027 | None:intergenic | 40.0% | |
| ATGTAATATGCCTGTGAGCA+GGG | - | chr3.3:71562736-71562755 | MS.gene75579:CDS | 40.0% | |
| CAATCTACATGCCAGTAATC+AGG | + | chr3.3:71559111-71559130 | None:intergenic | 40.0% | |
| CAGAATGCTCAATACTGTTG+AGG | + | chr3.3:71560356-71560375 | None:intergenic | 40.0% | |
| CAGTTCCTTTCTTGATGTCT+GGG | + | chr3.3:71561294-71561313 | None:intergenic | 40.0% | |
| CATATCCATTGTCTCTTCTC+AGG | - | chr3.3:71559552-71559571 | MS.gene75579:intron | 40.0% | |
| CCACCAATTTAGATGCAACT+AGG | + | chr3.3:71560572-71560591 | None:intergenic | 40.0% | |
| CCTAGTTGCATCTAAATTGG+TGG | - | chr3.3:71560569-71560588 | MS.gene75579:intron | 40.0% | |
| CTTGCATCACTGTGTAAATG+TGG | - | chr3.3:71558319-71558338 | MS.gene75579:CDS | 40.0% | |
| GAAATGCATTGCCGTAAATC+CGG | - | chr3.3:71562862-71562881 | MS.gene75579:intron | 40.0% | |
| GACCAGGGAAAACTGAATAA+TGG | + | chr3.3:71560416-71560435 | None:intergenic | 40.0% | |
| GATAGGTAGTTGGAATTGGA+GGG | - | chr3.3:71560526-71560545 | MS.gene75579:intron | 40.0% | |
| GATGTTCTCAAACAGATCAG+TGG | - | chr3.3:71562183-71562202 | MS.gene75579:intron | 40.0% | |
| GCTTATCTAGACGAAAAACC+TGG | - | chr3.3:71561879-71561898 | MS.gene75579:intron | 40.0% | |
| GCTTCATCTTGATAGGTAGT+TGG | - | chr3.3:71560516-71560535 | MS.gene75579:intron | 40.0% | |
| GGTTGACTGATATCAAATGC+AGG | + | chr3.3:71561635-71561654 | None:intergenic | 40.0% | |
| GTAGAACTTGATTATGGTGG+GGG | - | chr3.3:71562920-71562939 | MS.gene75579:CDS | 40.0% | |
| GTATGATAGGACTGAGGATA+AGG | - | chr3.3:71559028-71559047 | MS.gene75579:CDS | 40.0% | |
| GTCACAACAAATCATGCCAA+CGG | + | chr3.3:71559449-71559468 | None:intergenic | 40.0% | |
| TCATACATGAATCTGCAACC+TGG | + | chr3.3:71559014-71559033 | None:intergenic | 40.0% | |
| TCTCCTTGTACCATCTATAC+GGG | - | chr3.3:71561491-71561510 | MS.gene75579:CDS | 40.0% | |
| TGAAGGATTCAAATCCTCCT+TGG | + | chr3.3:71560616-71560635 | None:intergenic | 40.0% | |
| TGATAGGTAGTTGGAATTGG+AGG | - | chr3.3:71560525-71560544 | MS.gene75579:intron | 40.0% | |
| TGGAACCAGTGATAGTTGAA+GGG | + | chr3.3:71562447-71562466 | None:intergenic | 40.0% | |
| TTAAACGTTGCAAGTCAAGG+CGG | + | chr3.3:71560392-71560411 | None:intergenic | 40.0% | |
| TTGATCAAGGATTGGGTTTC+AGG | - | chr3.3:71562137-71562156 | MS.gene75579:intron | 40.0% | |
| TTGTATCTGTTGGGTCGTAA+GGG | - | chr3.3:71558422-71558441 | MS.gene75579:intron | 40.0% | |
| ! | AACAGTATTGAGCATTCTGG+AGG | - | chr3.3:71560357-71560376 | MS.gene75579:intron | 40.0% |
| ! | ACAAAGTACTTGAGGTCTGA+AGG | + | chr3.3:71562485-71562504 | None:intergenic | 40.0% |
| ! | ACACAGAGTATCTATCCCTT+TGG | - | chr3.3:71558507-71558526 | MS.gene75579:intron | 40.0% |
| ! | ACAGTATTGAGCATTCTGGA+GGG | - | chr3.3:71560358-71560377 | MS.gene75579:intron | 40.0% |
| ! | AGCCATTATTCAGTTTTCCC+TGG | - | chr3.3:71560411-71560430 | MS.gene75579:intron | 40.0% |
| ! | ATTGGGTTTCAGGTCAAAGT+TGG | - | chr3.3:71562147-71562166 | MS.gene75579:intron | 40.0% |
| ! | CATTGGTGATTCATGGATCA+GGG | - | chr3.3:71558982-71559001 | MS.gene75579:intron | 40.0% |
| ! | CCTTTTCAAAACGGACAGAT+AGG | - | chr3.3:71558832-71558851 | MS.gene75579:intron | 40.0% |
| ! | CTCAACAGTATTGAGCATTC+TGG | - | chr3.3:71560354-71560373 | MS.gene75579:intron | 40.0% |
| ! | GCTAGCCTAGGAATAATCAT+AGG | - | chr3.3:71560874-71560893 | MS.gene75579:intron | 40.0% |
| ! | TATTCCTAGGCTAGCTAGAT+AGG | + | chr3.3:71560869-71560888 | None:intergenic | 40.0% |
| ! | TCATTGGTGATTCATGGATC+AGG | - | chr3.3:71558981-71559000 | MS.gene75579:intron | 40.0% |
| ! | TCCATTTTCTACGTCAGGTA+TGG | + | chr3.3:71558883-71558902 | None:intergenic | 40.0% |
| ! | TTATTCAGTTTTCCCTGGTC+AGG | - | chr3.3:71560416-71560435 | MS.gene75579:intron | 40.0% |
| !! | ACATGTGTTGGTGTTGTGTT+TGG | - | chr3.3:71560047-71560066 | MS.gene75579:intron | 40.0% |
| !! | ATGATTTGTTGTGACGGAGA+AGG | - | chr3.3:71559454-71559473 | MS.gene75579:CDS | 40.0% |
| !! | CATGTGTTGGTGTTGTGTTT+GGG | - | chr3.3:71560048-71560067 | MS.gene75579:intron | 40.0% |
| !! | GTTGGCATGATTTGTTGTGA+CGG | - | chr3.3:71559448-71559467 | MS.gene75579:CDS | 40.0% |
| !! | TGTATGTATTGATTCTCCGG+TGG | + | chr3.3:71560252-71560271 | None:intergenic | 40.0% |
| !!! | CAGAGAAGCTTTTTTTCCGT+TGG | - | chr3.3:71559430-71559449 | MS.gene75579:CDS | 40.0% |
| !!! | CCTATCTGTCCGTTTTGAAA+AGG | + | chr3.3:71558835-71558854 | None:intergenic | 40.0% |
| AAAACGGACAGATAGGTTCG+CGG | - | chr3.3:71558839-71558858 | MS.gene75579:intron | 45.0% | |
| AAGGTGGAGGTTAGAACTTG+GGG | + | chr3.3:71561410-71561429 | None:intergenic | 45.0% | |
| ACCAATACAAGCAACTGTGG+TGG | + | chr3.3:71561115-71561134 | None:intergenic | 45.0% | |
| ACCACCACAGTTGCTTGTAT+TGG | - | chr3.3:71561111-71561130 | MS.gene75579:intron | 45.0% | |
| ACGATTATTCGTTGGTGTGC+TGG | + | chr3.3:71558727-71558746 | None:intergenic | 45.0% | |
| AGAAGCCCTTCAACTATCAC+TGG | - | chr3.3:71562439-71562458 | MS.gene75579:CDS | 45.0% | |
| AGTGATAGTTGAAGGGCTTC+TGG | + | chr3.3:71562440-71562459 | None:intergenic | 45.0% | |
| ATAGCCAGTCTCACTAATCC+TGG | - | chr3.3:71561773-71561792 | MS.gene75579:CDS | 45.0% | |
| ATCGACCTGAGAAGAGACAA+TGG | + | chr3.3:71559560-71559579 | None:intergenic | 45.0% | |
| ATGCATTAAACTCACCGGTG+AGG | + | chr3.3:71559218-71559237 | None:intergenic | 45.0% | |
| CAACTCAAGGGATGCCATAA+TGG | - | chr3.3:71559715-71559734 | MS.gene75579:intron | 45.0% | |
| CAAGAAAGGAACTGTGGACA+GGG | - | chr3.3:71561300-71561319 | MS.gene75579:intron | 45.0% | |
| CAAGGTGGAGGTTAGAACTT+GGG | + | chr3.3:71561411-71561430 | None:intergenic | 45.0% | |
| CACTAATCCTGGAATCTTCG+AGG | - | chr3.3:71561784-71561803 | MS.gene75579:CDS | 45.0% | |
| CATCCCGTATAGATGGTACA+AGG | + | chr3.3:71561497-71561516 | None:intergenic | 45.0% | |
| CATGTAATATGCCTGTGAGC+AGG | - | chr3.3:71562735-71562754 | MS.gene75579:CDS | 45.0% | |
| CGATTATTCGTTGGTGTGCT+GGG | + | chr3.3:71558726-71558745 | None:intergenic | 45.0% | |
| CGGAAAGGCTTCATCTTGAT+AGG | - | chr3.3:71560509-71560528 | MS.gene75579:intron | 45.0% | |
| CTGGAACCAGTGATAGTTGA+AGG | + | chr3.3:71562448-71562467 | None:intergenic | 45.0% | |
| CTTGTATCTGTTGGGTCGTA+AGG | - | chr3.3:71558421-71558440 | MS.gene75579:intron | 45.0% | |
| GAACACCCAGACATCAAGAA+AGG | - | chr3.3:71561286-71561305 | MS.gene75579:intron | 45.0% | |
| GCTTAACAGATTATTGCGGC+TGG | - | chr3.3:71561019-71561038 | MS.gene75579:intron | 45.0% | |
| GGATAGACTACTAGGTACAG+TGG | - | chr3.3:71558559-71558578 | MS.gene75579:intron | 45.0% | |
| GGCAATGCATTTCATGCTGT+TGG | + | chr3.3:71562855-71562874 | None:intergenic | 45.0% | |
| GGCTAATCTTCCCGGATTTA+CGG | + | chr3.3:71562876-71562895 | None:intergenic | 45.0% | |
| GGCTTAAACGTTGCAAGTCA+AGG | + | chr3.3:71560395-71560414 | None:intergenic | 45.0% | |
| GGTGATATTTGACAGACAGC+TGG | - | chr3.3:71557986-71558005 | MS.gene75579:intron | 45.0% | |
| GTTTCTTACTCACCTGACCA+GGG | + | chr3.3:71560431-71560450 | None:intergenic | 45.0% | |
| TATACCTACCTCTGTTGCCA+AGG | - | chr3.3:71560596-71560615 | MS.gene75579:intron | 45.0% | |
| TATCAGTCAACCTCAGGTTC+AGG | - | chr3.3:71561643-71561662 | MS.gene75579:CDS | 45.0% | |
| TATGCCAGCAGTTCTACAAG+AGG | + | chr3.3:71561079-71561098 | None:intergenic | 45.0% | |
| TCAAGAAAGGAACTGTGGAC+AGG | - | chr3.3:71561299-71561318 | MS.gene75579:intron | 45.0% | |
| TCAAGGTGGAGGTTAGAACT+TGG | + | chr3.3:71561412-71561431 | None:intergenic | 45.0% | |
| TCATTTGCCTCGAAGATTCC+AGG | + | chr3.3:71561794-71561813 | None:intergenic | 45.0% | |
| TCGTTTGGAAGTCTTGAGGA+AGG | - | chr3.3:71561339-71561358 | MS.gene75579:CDS | 45.0% | |
| TCTCAAACAGATCAGTGGAG+AGG | - | chr3.3:71562188-71562207 | MS.gene75579:intron | 45.0% | |
| TGGAATCTTCGAGGCAAATG+AGG | - | chr3.3:71561793-71561812 | MS.gene75579:CDS | 45.0% | |
| TGGTTAGCATCCCGTATAGA+TGG | + | chr3.3:71561504-71561523 | None:intergenic | 45.0% | |
| TGTTTCTTACTCACCTGACC+AGG | + | chr3.3:71560432-71560451 | None:intergenic | 45.0% | |
| ! | AATCCGGGAAGATTAGCCAA+AGG | - | chr3.3:71562878-71562897 | MS.gene75579:intron | 45.0% |
| ! | ACATCCTATCTAGCTAGCCT+AGG | - | chr3.3:71560862-71560881 | MS.gene75579:intron | 45.0% |
| ! | ATCCGGGAAGATTAGCCAAA+GGG | - | chr3.3:71562879-71562898 | MS.gene75579:intron | 45.0% |
| ! | CAAAGTTGGTTGCTGCACTT+TGG | - | chr3.3:71562161-71562180 | MS.gene75579:intron | 45.0% |
| ! | CAGTATTGAGCATTCTGGAG+GGG | - | chr3.3:71560359-71560378 | MS.gene75579:intron | 45.0% |
| ! | GATTCCAGGATTAGTGAGAC+TGG | + | chr3.3:71561780-71561799 | None:intergenic | 45.0% |
| ! | TGTTCCCTTGGACTTTTCTC+TGG | - | chr3.3:71562412-71562431 | MS.gene75579:CDS | 45.0% |
| !! | ATTCGGTGCCATATTCTCTG+AGG | + | chr3.3:71558483-71558502 | None:intergenic | 45.0% |
| !! | GGGCAGGTTCTTGATAATGA+AGG | - | chr3.3:71562821-71562840 | MS.gene75579:intron | 45.0% |
| !! | GTTGGTGTTGTGTTTGGGTT+GGG | - | chr3.3:71560053-71560072 | MS.gene75579:intron | 45.0% |
| !! | TGTTGGTGTTGTGTTTGGGT+TGG | - | chr3.3:71560052-71560071 | MS.gene75579:intron | 45.0% |
| !!! | TTTATTTCAAAATTTTATTT+TGG | + | chr3.3:71560209-71560228 | None:intergenic | 5.0% |
| AGACCCTTCAATTGCCTCAC+CGG | - | chr3.3:71559201-71559220 | MS.gene75579:CDS | 50.0% | |
| AGCTTGAGACGAGATCGGAA+GGG | + | chr3.3:71557765-71557784 | None:intergenic | 50.0% | |
| AGTCTGTCATGTTGCAGAGC+AGG | - | chr3.3:71559491-71559510 | MS.gene75579:intron | 50.0% | |
| CAAATCCTCCTTGGCAACAG+AGG | + | chr3.3:71560607-71560626 | None:intergenic | 50.0% | |
| CTATCCACTTTATCCACCGG+CGG | - | chr3.3:71562385-71562404 | MS.gene75579:intron | 50.0% | |
| GAACAGCAAGTGCATCAAGG+TGG | + | chr3.3:71561426-71561445 | None:intergenic | 50.0% | |
| GAGGCAATTGAAGGGTCTGT+TGG | + | chr3.3:71559199-71559218 | None:intergenic | 50.0% | |
| GCTGACACGCCATAAGCATA+TGG | - | chr3.3:71561901-71561920 | MS.gene75579:intron | 50.0% | |
| TCACCGGTGAGGCAATTGAA+GGG | + | chr3.3:71559207-71559226 | None:intergenic | 50.0% | |
| TCCCCTTTGGCTAATCTTCC+CGG | + | chr3.3:71562884-71562903 | None:intergenic | 50.0% | |
| TGAGCCTCTTGTAGAACTGC+TGG | - | chr3.3:71561072-71561091 | MS.gene75579:CDS | 50.0% | |
| TGGGAACAGCAAGTGCATCA+AGG | + | chr3.3:71561429-71561448 | None:intergenic | 50.0% | |
| TGGTTCTTCATAGAGCCCAG+AGG | + | chr3.3:71559179-71559198 | None:intergenic | 50.0% | |
| TTCCCAGCTTGAGACGAGAT+CGG | + | chr3.3:71557770-71557789 | None:intergenic | 50.0% | |
| TTCCGATCTCGTCTCAAGCT+GGG | - | chr3.3:71557765-71557784 | MS.gene75579:intron | 50.0% | |
| ! | AAGGGTGTAACCAGATCAGC+CGG | + | chr3.3:71558816-71558835 | None:intergenic | 50.0% |
| ! | AGATTAGCCAAAGGGGAAGG+CGG | - | chr3.3:71562887-71562906 | MS.gene75579:intron | 50.0% |
| ! | ATTGGAGGGCATAATCCCAG+TGG | - | chr3.3:71560540-71560559 | MS.gene75579:intron | 50.0% |
| ! | GGAAGATTAGCCAAAGGGGA+AGG | - | chr3.3:71562884-71562903 | MS.gene75579:intron | 50.0% |
| ! | TCCGGGAAGATTAGCCAAAG+GGG | - | chr3.3:71562880-71562899 | MS.gene75579:intron | 50.0% |
| ! | TTGGAGGGCATAATCCCAGT+GGG | - | chr3.3:71560541-71560560 | MS.gene75579:intron | 50.0% |
| !! | ATGCACTTGCTGTTCCCAGT+TGG | - | chr3.3:71561431-71561450 | MS.gene75579:intron | 50.0% |
| !! | CAAGAGCACTTGTAGCCTCT+GGG | - | chr3.3:71559161-71559180 | MS.gene75579:intron | 50.0% |
| !! | CTCTGTAGCACCGACTCTTA+CGG | + | chr3.3:71560094-71560113 | None:intergenic | 50.0% |
| ACCTACCTCTGTTGCCAAGG+AGG | - | chr3.3:71560599-71560618 | MS.gene75579:intron | 55.0% | |
| ATCTGGAAAGCCGGCTGATC+TGG | - | chr3.3:71558803-71558822 | MS.gene75579:intron | 55.0% | |
| ATGCTTATGGCGTGTCAGCC+AGG | + | chr3.3:71561900-71561919 | None:intergenic | 55.0% | |
| CAGCAAGTGCATCAAGGTGG+AGG | + | chr3.3:71561423-71561442 | None:intergenic | 55.0% | |
| CAGCTTGAGACGAGATCGGA+AGG | + | chr3.3:71557766-71557785 | None:intergenic | 55.0% | |
| CTCACCGGTGAGGCAATTGA+AGG | + | chr3.3:71559208-71559227 | None:intergenic | 55.0% | |
| CTTCCGATCTCGTCTCAAGC+TGG | - | chr3.3:71557764-71557783 | MS.gene75579:intron | 55.0% | |
| CTTTCCGCCGGTGGATAAAG+TGG | + | chr3.3:71562392-71562411 | None:intergenic | 55.0% | |
| GACACGCCTTCCGTAAGAGT+CGG | - | chr3.3:71560081-71560100 | MS.gene75579:intron | 55.0% | |
| GCAACTAGGCAATGCCCACT+GGG | + | chr3.3:71560558-71560577 | None:intergenic | 55.0% | |
| GCTTGAGACGAGATCGGAAG+GGG | + | chr3.3:71557764-71557783 | None:intergenic | 55.0% | |
| GGCGCCAGAGAAAAGTCCAA+GGG | + | chr3.3:71562419-71562438 | None:intergenic | 55.0% | |
| GTCCCAATGTGATGATCCCC+CGG | + | chr3.3:71558452-71558471 | None:intergenic | 55.0% | |
| GTGTCAACGTGTCAGTGTCG+TGG | + | chr3.3:71559987-71560006 | None:intergenic | 55.0% | |
| TCCAAGGGAACACTTTCCGC+CGG | + | chr3.3:71562404-71562423 | None:intergenic | 55.0% | |
| TCCCAATGTGATGATCCCCC+GGG | + | chr3.3:71558451-71558470 | None:intergenic | 55.0% | |
| TCCTCCTTGGCAACAGAGGT+AGG | + | chr3.3:71560603-71560622 | None:intergenic | 55.0% | |
| TGCAACTAGGCAATGCCCAC+TGG | + | chr3.3:71560559-71560578 | None:intergenic | 55.0% | |
| TGGCGCCAGAGAAAAGTCCA+AGG | + | chr3.3:71562420-71562439 | None:intergenic | 55.0% | |
| ! | ACTCTTACGGAAGGCGTGTC+CGG | + | chr3.3:71560081-71560100 | None:intergenic | 55.0% |
| !! | GCAAGAGCACTTGTAGCCTC+TGG | - | chr3.3:71559160-71559179 | MS.gene75579:intron | 55.0% |
| !! | GTAGCACCGACTCTTACGGA+AGG | + | chr3.3:71560090-71560109 | None:intergenic | 55.0% |
| !! | GTTGTGTTTGGGTTGGGCAC+CGG | - | chr3.3:71560059-71560078 | MS.gene75579:intron | 55.0% |
| AAGGGAACACTTTCCGCCGG+TGG | + | chr3.3:71562401-71562420 | None:intergenic | 60.0% | |
| AGCCCGGGGGATCATCACAT+TGG | - | chr3.3:71558446-71558465 | MS.gene75579:intron | 60.0% | |
| CATGGATCAGGGCCGAAACC+AGG | - | chr3.3:71558993-71559012 | MS.gene75579:intron | 60.0% | |
| GCCCGGGGGATCATCACATT+GGG | - | chr3.3:71558447-71558466 | MS.gene75579:intron | 60.0% | |
| GTTGGGTCGTAAGGGAAGCC+CGG | - | chr3.3:71558430-71558449 | MS.gene75579:intron | 60.0% | |
| TGTTCAGCGACCCTGCTCAC+AGG | + | chr3.3:71562749-71562768 | None:intergenic | 60.0% | |
| TTAGCCAAAGGGGAAGGCGG+AGG | - | chr3.3:71562890-71562909 | MS.gene75579:intron | 60.0% | |
| TTGGGTCGTAAGGGAAGCCC+GGG | - | chr3.3:71558431-71558450 | MS.gene75579:intron | 60.0% | |
| !! | ACCGGCGGAAAGTGTTCCCT+TGG | - | chr3.3:71562400-71562419 | MS.gene75579:intron | 60.0% |
| AGTGCCTCCGCCTTCCCCTT+TGG | + | chr3.3:71562897-71562916 | None:intergenic | 65.0% | |
| TGGGTCGTAAGGGAAGCCCG+GGG | - | chr3.3:71558432-71558451 | MS.gene75579:intron | 65.0% | |
| GGGTCGTAAGGGAAGCCCGG+GGG | - | chr3.3:71558433-71558452 | MS.gene75579:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 71557557 | 71562979 | 71557557 | ID=MS.gene75579 |
| chr3.3 | mRNA | 71557557 | 71562979 | 71557557 | ID=MS.gene75579.t1;Parent=MS.gene75579 |
| chr3.3 | exon | 71562898 | 71562979 | 71562898 | ID=MS.gene75579.t1.exon1;Parent=MS.gene75579.t1 |
| chr3.3 | CDS | 71562898 | 71562979 | 71562898 | ID=cds.MS.gene75579.t1;Parent=MS.gene75579.t1 |
| chr3.3 | exon | 71562730 | 71562805 | 71562730 | ID=MS.gene75579.t1.exon2;Parent=MS.gene75579.t1 |
| chr3.3 | CDS | 71562730 | 71562805 | 71562730 | ID=cds.MS.gene75579.t1;Parent=MS.gene75579.t1 |
| chr3.3 | exon | 71562404 | 71562535 | 71562404 | ID=MS.gene75579.t1.exon3;Parent=MS.gene75579.t1 |
| chr3.3 | CDS | 71562404 | 71562535 | 71562404 | ID=cds.MS.gene75579.t1;Parent=MS.gene75579.t1 |
| chr3.3 | exon | 71561487 | 71561847 | 71561487 | ID=MS.gene75579.t1.exon4;Parent=MS.gene75579.t1 |
| chr3.3 | CDS | 71561487 | 71561847 | 71561487 | ID=cds.MS.gene75579.t1;Parent=MS.gene75579.t1 |
| chr3.3 | exon | 71561314 | 71561409 | 71561314 | ID=MS.gene75579.t1.exon5;Parent=MS.gene75579.t1 |
| chr3.3 | CDS | 71561314 | 71561409 | 71561314 | ID=cds.MS.gene75579.t1;Parent=MS.gene75579.t1 |
| chr3.3 | exon | 71561024 | 71561103 | 71561024 | ID=MS.gene75579.t1.exon6;Parent=MS.gene75579.t1 |
| chr3.3 | CDS | 71561024 | 71561103 | 71561024 | ID=cds.MS.gene75579.t1;Parent=MS.gene75579.t1 |
| chr3.3 | exon | 71560099 | 71560174 | 71560099 | ID=MS.gene75579.t1.exon7;Parent=MS.gene75579.t1 |
| chr3.3 | CDS | 71560099 | 71560174 | 71560099 | ID=cds.MS.gene75579.t1;Parent=MS.gene75579.t1 |
| chr3.3 | exon | 71559832 | 71560005 | 71559832 | ID=MS.gene75579.t1.exon8;Parent=MS.gene75579.t1 |
| chr3.3 | CDS | 71559832 | 71560005 | 71559832 | ID=cds.MS.gene75579.t1;Parent=MS.gene75579.t1 |
| chr3.3 | exon | 71559404 | 71559508 | 71559404 | ID=MS.gene75579.t1.exon9;Parent=MS.gene75579.t1 |
| chr3.3 | CDS | 71559404 | 71559508 | 71559404 | ID=cds.MS.gene75579.t1;Parent=MS.gene75579.t1 |
| chr3.3 | exon | 71559176 | 71559271 | 71559176 | ID=MS.gene75579.t1.exon10;Parent=MS.gene75579.t1 |
| chr3.3 | CDS | 71559176 | 71559271 | 71559176 | ID=cds.MS.gene75579.t1;Parent=MS.gene75579.t1 |
| chr3.3 | exon | 71558994 | 71559086 | 71558994 | ID=MS.gene75579.t1.exon11;Parent=MS.gene75579.t1 |
| chr3.3 | CDS | 71558994 | 71559086 | 71558994 | ID=cds.MS.gene75579.t1;Parent=MS.gene75579.t1 |
| chr3.3 | exon | 71558872 | 71558904 | 71558872 | ID=MS.gene75579.t1.exon12;Parent=MS.gene75579.t1 |
| chr3.3 | CDS | 71558872 | 71558904 | 71558872 | ID=cds.MS.gene75579.t1;Parent=MS.gene75579.t1 |
| chr3.3 | exon | 71558722 | 71558763 | 71558722 | ID=MS.gene75579.t1.exon13;Parent=MS.gene75579.t1 |
| chr3.3 | CDS | 71558722 | 71558763 | 71558722 | ID=cds.MS.gene75579.t1;Parent=MS.gene75579.t1 |
| chr3.3 | exon | 71558247 | 71558377 | 71558247 | ID=MS.gene75579.t1.exon14;Parent=MS.gene75579.t1 |
| chr3.3 | CDS | 71558247 | 71558377 | 71558247 | ID=cds.MS.gene75579.t1;Parent=MS.gene75579.t1 |
| chr3.3 | exon | 71558028 | 71558154 | 71558028 | ID=MS.gene75579.t1.exon15;Parent=MS.gene75579.t1 |
| chr3.3 | CDS | 71558028 | 71558154 | 71558028 | ID=cds.MS.gene75579.t1;Parent=MS.gene75579.t1 |
| chr3.3 | exon | 71557557 | 71557709 | 71557557 | ID=MS.gene75579.t1.exon16;Parent=MS.gene75579.t1 |
| chr3.3 | CDS | 71557557 | 71557709 | 71557557 | ID=cds.MS.gene75579.t1;Parent=MS.gene75579.t1 |
| Gene Sequence |
| Protein sequence |
