Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037465.t1 | XP_013454832.1 | 99.4 | 341 | 2 | 0 | 1 | 341 | 1 | 341 | 1.80E-191 | 678.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037465.t1 | Q5R8J8 | 45.6 | 355 | 161 | 10 | 1 | 341 | 1 | 337 | 8.0e-71 | 268.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037465.t1 | G8A2L9 | 99.4 | 341 | 2 | 0 | 1 | 341 | 1 | 341 | 1.3e-191 | 678.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene50004 | MS.gene037465 | PPI |
MS.gene047354 | MS.gene037465 | PPI |
MS.gene072961 | MS.gene037465 | PPI |
MS.gene01038 | MS.gene037465 | PPI |
MS.gene002499 | MS.gene037465 | PPI |
MS.gene031675 | MS.gene037465 | PPI |
MS.gene045555 | MS.gene037465 | PPI |
MS.gene037465 | MS.gene07262 | PPI |
MS.gene006630 | MS.gene037465 | PPI |
MS.gene062351 | MS.gene037465 | PPI |
MS.gene01472 | MS.gene037465 | PPI |
MS.gene20783 | MS.gene037465 | PPI |
MS.gene037465 | MS.gene20834 | PPI |
MS.gene50013 | MS.gene037465 | PPI |
MS.gene030057 | MS.gene037465 | PPI |
MS.gene75767 | MS.gene037465 | PPI |
MS.gene017129 | MS.gene037465 | PPI |
MS.gene038363 | MS.gene037465 | PPI |
MS.gene014782 | MS.gene037465 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037465.t1 | MTR_4g015840 | 99.413 | 341 | 2 | 0 | 1 | 341 | 1 | 341 | 0.0 | 692 |
MS.gene037465.t1 | MTR_4g015840 | 99.621 | 264 | 1 | 0 | 78 | 341 | 1 | 264 | 0.0 | 533 |
MS.gene037465.t1 | MTR_2g014470 | 70.640 | 344 | 91 | 4 | 1 | 339 | 1 | 339 | 1.28e-170 | 478 |
MS.gene037465.t1 | MTR_4g078850 | 67.236 | 351 | 100 | 4 | 1 | 341 | 1 | 346 | 1.00e-169 | 476 |
MS.gene037465.t1 | MTR_2g090705 | 63.143 | 350 | 103 | 5 | 1 | 339 | 1 | 335 | 1.89e-153 | 434 |
MS.gene037465.t1 | MTR_2g014480 | 60.290 | 345 | 118 | 6 | 1 | 332 | 1 | 339 | 1.13e-135 | 389 |
MS.gene037465.t1 | MTR_3g108020 | 58.235 | 340 | 125 | 5 | 1 | 338 | 1 | 325 | 1.27e-128 | 371 |
MS.gene037465.t1 | MTR_5g037880 | 56.571 | 175 | 76 | 0 | 165 | 339 | 101 | 275 | 6.80e-68 | 214 |
MS.gene037465.t1 | MTR_5g037880 | 54.667 | 75 | 27 | 1 | 4 | 71 | 5 | 79 | 1.97e-19 | 87.0 |
MS.gene037465.t1 | MTR_7g109340 | 37.318 | 343 | 180 | 8 | 5 | 338 | 27 | 343 | 1.04e-54 | 182 |
MS.gene037465.t1 | MTR_3g437840 | 47.205 | 161 | 85 | 0 | 179 | 339 | 2 | 162 | 7.28e-51 | 167 |
MS.gene037465.t1 | MTR_3g437360 | 49.123 | 171 | 81 | 3 | 148 | 316 | 165 | 331 | 1.36e-47 | 164 |
MS.gene037465.t1 | MTR_3g437360 | 49.367 | 79 | 40 | 0 | 3 | 81 | 4 | 82 | 8.63e-19 | 86.3 |
MS.gene037465.t1 | MTR_2g006890 | 44.624 | 186 | 102 | 1 | 154 | 338 | 190 | 375 | 2.96e-46 | 161 |
MS.gene037465.t1 | MTR_3g088140 | 43.407 | 182 | 102 | 1 | 161 | 341 | 175 | 356 | 3.28e-45 | 158 |
MS.gene037465.t1 | MTR_8g006430 | 29.208 | 404 | 160 | 12 | 5 | 338 | 15 | 362 | 3.10e-36 | 135 |
MS.gene037465.t1 | MTR_3g437850 | 36.816 | 201 | 85 | 4 | 3 | 195 | 1 | 167 | 5.11e-36 | 128 |
MS.gene037465.t1 | MTR_3g087030 | 28.689 | 366 | 209 | 13 | 3 | 337 | 81 | 425 | 1.23e-31 | 123 |
MS.gene037465.t1 | MTR_5g065160 | 29.480 | 346 | 216 | 12 | 4 | 332 | 83 | 417 | 1.01e-26 | 110 |
MS.gene037465.t1 | MTR_5g065160 | 29.480 | 346 | 216 | 12 | 4 | 332 | 82 | 416 | 1.05e-26 | 110 |
MS.gene037465.t1 | MTR_5g065160 | 29.480 | 346 | 216 | 12 | 4 | 332 | 83 | 417 | 1.64e-26 | 109 |
MS.gene037465.t1 | MTR_5g065160 | 29.480 | 346 | 216 | 12 | 4 | 332 | 76 | 410 | 1.69e-26 | 109 |
MS.gene037465.t1 | MTR_2g087660 | 36.232 | 138 | 86 | 1 | 203 | 338 | 221 | 358 | 1.66e-24 | 103 |
MS.gene037465.t1 | MTR_2g087660 | 56.338 | 71 | 26 | 1 | 5 | 75 | 14 | 79 | 3.15e-12 | 67.4 |
MS.gene037465.t1 | MTR_4g050420 | 35.507 | 138 | 87 | 1 | 203 | 338 | 219 | 356 | 1.36e-23 | 100 |
MS.gene037465.t1 | MTR_4g050420 | 52.113 | 71 | 29 | 1 | 5 | 75 | 14 | 79 | 9.64e-11 | 62.8 |
MS.gene037465.t1 | MTR_3g027580 | 30.028 | 353 | 211 | 11 | 4 | 337 | 89 | 424 | 2.83e-23 | 100 |
MS.gene037465.t1 | MTR_4g023470 | 26.149 | 348 | 220 | 11 | 5 | 331 | 87 | 418 | 7.68e-20 | 90.5 |
MS.gene037465.t1 | MTR_7g101070 | 55.385 | 65 | 29 | 0 | 4 | 68 | 358 | 422 | 3.82e-19 | 88.6 |
MS.gene037465.t1 | MTR_2g104030 | 41.803 | 122 | 51 | 4 | 4 | 125 | 70 | 171 | 8.22e-19 | 87.4 |
MS.gene037465.t1 | MTR_7g112360 | 54.545 | 66 | 27 | 1 | 5 | 67 | 17 | 82 | 6.19e-17 | 77.4 |
MS.gene037465.t1 | MTR_6g471050 | 25.501 | 349 | 199 | 11 | 30 | 339 | 7 | 333 | 7.74e-17 | 81.6 |
MS.gene037465.t1 | MTR_7g112360 | 54.545 | 66 | 27 | 1 | 5 | 67 | 17 | 82 | 8.62e-17 | 75.9 |
MS.gene037465.t1 | MTR_5g012530 | 47.297 | 74 | 37 | 1 | 4 | 75 | 12 | 85 | 1.31e-15 | 78.2 |
MS.gene037465.t1 | MTR_1g110310 | 49.296 | 71 | 35 | 1 | 4 | 74 | 16 | 85 | 2.97e-15 | 76.6 |
MS.gene037465.t1 | MTR_5g065860 | 51.562 | 64 | 30 | 1 | 4 | 67 | 48 | 110 | 4.85e-15 | 72.0 |
MS.gene037465.t1 | MTR_7g069480 | 50.000 | 70 | 33 | 1 | 3 | 72 | 26 | 93 | 7.71e-15 | 75.9 |
MS.gene037465.t1 | MTR_8g022310 | 46.377 | 69 | 32 | 1 | 4 | 67 | 10 | 78 | 1.79e-14 | 72.0 |
MS.gene037465.t1 | MTR_5g035770 | 49.315 | 73 | 36 | 1 | 4 | 76 | 25 | 96 | 3.00e-14 | 73.6 |
MS.gene037465.t1 | MTR_8g022310 | 46.377 | 69 | 32 | 1 | 4 | 67 | 10 | 78 | 3.03e-14 | 70.9 |
MS.gene037465.t1 | MTR_8g022310 | 46.377 | 69 | 32 | 1 | 4 | 67 | 10 | 78 | 3.67e-14 | 71.6 |
MS.gene037465.t1 | MTR_8g022310 | 46.377 | 69 | 32 | 1 | 4 | 67 | 10 | 78 | 3.87e-14 | 70.9 |
MS.gene037465.t1 | MTR_2g087660 | 37.209 | 86 | 54 | 0 | 201 | 286 | 219 | 304 | 7.49e-14 | 71.6 |
MS.gene037465.t1 | MTR_2g087660 | 56.338 | 71 | 26 | 1 | 5 | 75 | 14 | 79 | 1.91e-12 | 67.8 |
MS.gene037465.t1 | MTR_4g085070 | 54.717 | 53 | 21 | 1 | 18 | 67 | 26 | 78 | 1.10e-13 | 68.2 |
MS.gene037465.t1 | MTR_6g027110 | 41.333 | 75 | 40 | 1 | 3 | 73 | 1 | 75 | 1.20e-13 | 67.8 |
MS.gene037465.t1 | MTR_3g100330 | 52.239 | 67 | 29 | 2 | 3 | 68 | 68 | 132 | 2.06e-13 | 69.3 |
MS.gene037465.t1 | MTR_1g029460 | 40.000 | 95 | 47 | 3 | 3 | 88 | 5 | 98 | 3.21e-13 | 70.5 |
MS.gene037465.t1 | MTR_6g027030 | 42.667 | 75 | 39 | 1 | 3 | 73 | 1 | 75 | 3.87e-13 | 68.2 |
MS.gene037465.t1 | MTR_1g087580 | 41.964 | 112 | 58 | 4 | 234 | 340 | 76 | 185 | 7.71e-13 | 67.0 |
MS.gene037465.t1 | MTR_6g026940 | 43.478 | 69 | 35 | 1 | 3 | 67 | 1 | 69 | 1.03e-12 | 66.2 |
MS.gene037465.t1 | MTR_1g052110 | 46.154 | 65 | 34 | 1 | 6 | 70 | 40 | 103 | 3.22e-12 | 66.6 |
MS.gene037465.t1 | MTR_7g092380 | 31.707 | 123 | 77 | 3 | 6 | 122 | 24 | 145 | 7.39e-12 | 65.5 |
MS.gene037465.t1 | MTR_5g004570 | 45.070 | 71 | 38 | 1 | 4 | 74 | 6 | 75 | 1.79e-11 | 63.9 |
MS.gene037465.t1 | MTR_2g020420 | 53.846 | 65 | 28 | 1 | 3 | 67 | 68 | 130 | 8.31e-11 | 63.9 |
MS.gene037465.t1 | MTR_2g020420 | 53.846 | 65 | 28 | 1 | 3 | 67 | 68 | 130 | 8.42e-11 | 63.5 |
MS.gene037465.t1 | MTR_8g037810 | 42.697 | 89 | 48 | 2 | 5 | 91 | 7 | 94 | 9.65e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037465.t1 | AT3G08910 | 77.843 | 343 | 54 | 5 | 1 | 341 | 1 | 323 | 0.0 | 519 |
MS.gene037465.t1 | AT5G01390 | 75.294 | 340 | 77 | 4 | 1 | 339 | 1 | 334 | 2.69e-180 | 502 |
MS.gene037465.t1 | AT2G20560 | 71.594 | 345 | 82 | 4 | 1 | 338 | 1 | 336 | 3.42e-174 | 487 |
MS.gene037465.t1 | AT4G28480 | 67.705 | 353 | 93 | 4 | 1 | 338 | 1 | 347 | 3.44e-163 | 459 |
MS.gene037465.t1 | AT4G28480 | 61.808 | 343 | 72 | 5 | 1 | 338 | 1 | 289 | 7.50e-137 | 390 |
MS.gene037465.t1 | AT5G25530 | 58.166 | 349 | 125 | 6 | 1 | 339 | 1 | 338 | 4.09e-136 | 390 |
MS.gene037465.t1 | AT5G25530 | 56.863 | 357 | 125 | 7 | 1 | 339 | 1 | 346 | 3.00e-133 | 384 |
MS.gene037465.t1 | AT5G01390 | 60.933 | 343 | 63 | 5 | 1 | 339 | 1 | 276 | 2.75e-132 | 378 |
MS.gene037465.t1 | AT1G10350 | 55.429 | 350 | 146 | 3 | 1 | 341 | 1 | 349 | 3.30e-128 | 371 |
MS.gene037465.t1 | AT3G47940 | 52.162 | 370 | 121 | 5 | 1 | 338 | 1 | 346 | 2.80e-125 | 363 |
MS.gene037465.t1 | AT1G59725 | 54.131 | 351 | 131 | 4 | 1 | 341 | 1 | 331 | 2.02e-123 | 358 |
MS.gene037465.t1 | AT5G01390 | 53.392 | 339 | 56 | 5 | 1 | 339 | 1 | 237 | 6.52e-106 | 310 |
MS.gene037465.t1 | AT2G20550 | 55.634 | 284 | 78 | 6 | 100 | 338 | 3 | 283 | 2.17e-96 | 287 |
MS.gene037465.t1 | AT2G20550 | 55.634 | 284 | 78 | 6 | 100 | 338 | 3 | 283 | 2.17e-96 | 287 |
MS.gene037465.t1 | AT5G01390 | 70.918 | 196 | 50 | 4 | 1 | 195 | 1 | 190 | 2.02e-84 | 255 |
MS.gene037465.t1 | AT1G44160 | 43.644 | 236 | 120 | 3 | 111 | 341 | 129 | 356 | 4.90e-53 | 179 |
MS.gene037465.t1 | AT3G62600 | 37.037 | 351 | 180 | 11 | 2 | 339 | 24 | 346 | 1.37e-51 | 174 |
MS.gene037465.t1 | AT1G11040 | 39.604 | 202 | 107 | 1 | 146 | 332 | 225 | 426 | 1.92e-44 | 158 |
MS.gene037465.t1 | AT5G22060 | 30.653 | 398 | 159 | 10 | 5 | 338 | 15 | 359 | 1.84e-36 | 136 |
MS.gene037465.t1 | AT2G22360 | 29.091 | 385 | 182 | 13 | 3 | 337 | 85 | 428 | 2.07e-35 | 134 |
MS.gene037465.t1 | AT5G48030 | 28.532 | 361 | 203 | 14 | 4 | 331 | 94 | 432 | 5.80e-26 | 108 |
MS.gene037465.t1 | AT3G44110 | 35.507 | 138 | 87 | 1 | 203 | 338 | 221 | 358 | 3.53e-23 | 99.8 |
MS.gene037465.t1 | AT1G80030 | 43.307 | 127 | 46 | 5 | 4 | 130 | 75 | 175 | 8.11e-21 | 93.6 |
MS.gene037465.t1 | AT1G80030 | 43.307 | 127 | 46 | 5 | 4 | 130 | 75 | 175 | 1.10e-20 | 93.2 |
MS.gene037465.t1 | AT1G80030 | 43.307 | 127 | 46 | 5 | 4 | 130 | 75 | 175 | 1.10e-20 | 93.2 |
MS.gene037465.t1 | AT1G80030 | 43.307 | 127 | 46 | 5 | 4 | 130 | 75 | 175 | 1.10e-20 | 93.2 |
MS.gene037465.t1 | AT3G17830 | 56.000 | 75 | 31 | 1 | 2 | 76 | 61 | 133 | 2.03e-19 | 89.4 |
MS.gene037465.t1 | AT4G39960 | 50.588 | 85 | 36 | 2 | 4 | 88 | 85 | 163 | 8.73e-19 | 87.4 |
MS.gene037465.t1 | AT4G39960 | 32.353 | 136 | 88 | 3 | 204 | 337 | 301 | 434 | 2.19e-14 | 74.3 |
MS.gene037465.t1 | AT4G39960 | 50.588 | 85 | 36 | 2 | 4 | 88 | 85 | 163 | 8.73e-19 | 87.4 |
MS.gene037465.t1 | AT4G39960 | 32.353 | 136 | 88 | 3 | 204 | 337 | 301 | 434 | 2.19e-14 | 74.3 |
MS.gene037465.t1 | AT3G44110 | 36.111 | 108 | 67 | 1 | 203 | 308 | 221 | 328 | 1.07e-16 | 80.5 |
MS.gene037465.t1 | AT5G03160 | 52.308 | 65 | 31 | 0 | 4 | 68 | 370 | 434 | 2.38e-16 | 80.1 |
MS.gene037465.t1 | AT1G68370 | 52.113 | 71 | 33 | 1 | 4 | 74 | 17 | 86 | 5.54e-16 | 79.0 |
MS.gene037465.t1 | AT1G56300 | 51.515 | 66 | 29 | 1 | 5 | 67 | 14 | 79 | 9.70e-16 | 73.2 |
MS.gene037465.t1 | AT1G56300 | 51.515 | 66 | 29 | 1 | 5 | 67 | 14 | 79 | 1.13e-15 | 73.9 |
MS.gene037465.t1 | AT5G16650 | 51.562 | 64 | 30 | 1 | 4 | 67 | 11 | 73 | 2.00e-15 | 73.6 |
MS.gene037465.t1 | AT5G16650 | 51.562 | 64 | 30 | 1 | 4 | 67 | 11 | 73 | 2.82e-15 | 72.0 |
MS.gene037465.t1 | AT1G59980 | 47.826 | 69 | 35 | 1 | 6 | 74 | 25 | 92 | 8.22e-15 | 75.1 |
MS.gene037465.t1 | AT1G59980 | 47.826 | 69 | 35 | 1 | 6 | 74 | 25 | 92 | 1.62e-14 | 74.3 |
MS.gene037465.t1 | AT2G41000 | 46.377 | 69 | 33 | 1 | 3 | 67 | 2 | 70 | 2.94e-14 | 71.2 |
MS.gene037465.t1 | AT3G08970 | 49.333 | 75 | 34 | 2 | 3 | 77 | 26 | 96 | 4.13e-14 | 73.6 |
MS.gene037465.t1 | AT3G08970 | 49.333 | 75 | 34 | 2 | 3 | 77 | 26 | 96 | 4.13e-14 | 73.6 |
MS.gene037465.t1 | AT2G35720 | 45.205 | 73 | 38 | 1 | 4 | 74 | 15 | 87 | 5.11e-14 | 73.2 |
MS.gene037465.t1 | AT2G41000 | 46.377 | 69 | 33 | 1 | 3 | 67 | 2 | 70 | 6.69e-14 | 69.7 |
MS.gene037465.t1 | AT2G21510 | 46.914 | 81 | 41 | 2 | 4 | 83 | 6 | 85 | 9.63e-14 | 71.6 |
MS.gene037465.t1 | AT2G21510 | 46.914 | 81 | 41 | 2 | 4 | 83 | 6 | 85 | 9.63e-14 | 71.6 |
MS.gene037465.t1 | AT2G21510 | 46.914 | 81 | 41 | 2 | 4 | 83 | 6 | 85 | 9.77e-14 | 71.6 |
MS.gene037465.t1 | AT2G21510 | 46.914 | 81 | 41 | 2 | 4 | 83 | 6 | 85 | 9.77e-14 | 71.6 |
MS.gene037465.t1 | AT2G21510 | 46.914 | 81 | 41 | 2 | 4 | 83 | 6 | 85 | 1.31e-13 | 71.2 |
MS.gene037465.t1 | AT1G24120 | 44.595 | 74 | 40 | 1 | 4 | 77 | 20 | 92 | 1.99e-13 | 71.2 |
MS.gene037465.t1 | AT2G33735 | 46.154 | 65 | 34 | 1 | 4 | 68 | 22 | 85 | 2.71e-13 | 66.2 |
MS.gene037465.t1 | AT2G33735 | 46.154 | 65 | 34 | 1 | 4 | 68 | 22 | 85 | 2.71e-13 | 66.2 |
MS.gene037465.t1 | AT5G06910 | 49.231 | 65 | 32 | 1 | 6 | 70 | 31 | 94 | 8.32e-13 | 68.2 |
MS.gene037465.t1 | AT1G71000 | 43.939 | 66 | 34 | 1 | 5 | 67 | 9 | 74 | 7.69e-12 | 63.5 |
MS.gene037465.t1 | AT4G39150 | 43.210 | 81 | 44 | 2 | 4 | 83 | 6 | 85 | 1.12e-11 | 65.5 |
MS.gene037465.t1 | AT4G39150 | 43.210 | 81 | 44 | 2 | 4 | 83 | 6 | 85 | 1.12e-11 | 65.5 |
MS.gene037465.t1 | AT4G39150 | 43.210 | 81 | 44 | 2 | 4 | 83 | 6 | 85 | 1.12e-11 | 65.5 |
MS.gene037465.t1 | AT1G71000 | 43.939 | 66 | 34 | 1 | 5 | 67 | 9 | 74 | 1.69e-11 | 62.4 |
MS.gene037465.t1 | AT4G19570 | 51.515 | 66 | 30 | 1 | 3 | 68 | 65 | 128 | 2.75e-11 | 65.1 |
MS.gene037465.t1 | AT3G12170 | 46.154 | 65 | 34 | 1 | 6 | 70 | 13 | 76 | 3.28e-11 | 63.5 |
MS.gene037465.t1 | AT1G21080 | 41.250 | 80 | 46 | 1 | 4 | 83 | 6 | 84 | 3.63e-11 | 64.3 |
MS.gene037465.t1 | AT1G21080 | 40.741 | 81 | 47 | 1 | 3 | 83 | 5 | 84 | 3.95e-11 | 63.9 |
MS.gene037465.t1 | AT5G05750 | 37.273 | 110 | 61 | 3 | 4 | 113 | 114 | 215 | 4.63e-11 | 63.2 |
MS.gene037465.t1 | AT3G12170 | 46.154 | 65 | 34 | 1 | 6 | 70 | 49 | 112 | 5.69e-11 | 63.2 |
Find 95 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCAGAGATTTGCTTGAATT+TGG | 0.168588 | 4.4:-84681990 | None:intergenic |
TCAGCATCTTTCTTGTTATT+AGG | 0.176740 | 4.4:-84681965 | None:intergenic |
CAGCATCTTTCTTGTTATTA+GGG | 0.208495 | 4.4:-84681964 | None:intergenic |
TCCCATCGAGGGTAGCTATT+TGG | 0.216321 | 4.4:-84685020 | None:intergenic |
TCCTAAGGAACCTTCCAAAA+AGG | 0.245405 | 4.4:+84685119 | MS.gene037465:CDS |
GCTTTCCGAGGGGAATGTTT+AGG | 0.274668 | 4.4:+84683242 | MS.gene037465:CDS |
CTTTCCGAGGGGAATGTTTA+GGG | 0.283758 | 4.4:+84683243 | MS.gene037465:CDS |
CCCATCGAGGGTAGCTATTT+GGG | 0.309339 | 4.4:-84685019 | None:intergenic |
TCATATGAAGAAGTAATTAA+AGG | 0.309573 | 4.4:+84685081 | MS.gene037465:CDS |
TGCTCTGATGTAAGTCTTGA+TGG | 0.316745 | 4.4:-84685174 | None:intergenic |
AGTTTGGAGGATTTGTATAA+AGG | 0.321209 | 4.4:+84683358 | MS.gene037465:CDS |
TGGCGGTGGAATGGGTGATA+TGG | 0.323498 | 4.4:+84683198 | MS.gene037465:CDS |
CTCTGTTCATTTCCCTTCTC+CGG | 0.330584 | 4.4:-84684868 | None:intergenic |
AAACAAGGTCTGCAGGTATA+AGG | 0.341570 | 4.4:-84684894 | None:intergenic |
TTGTTATTAGGGTTCTTATC+AGG | 0.349663 | 4.4:-84681953 | None:intergenic |
GTTTGGAGGATTTGTATAAA+GGG | 0.350475 | 4.4:+84683359 | MS.gene037465:CDS |
AGAATTTCCTCAACTGTAGT+AGG | 0.358832 | 4.4:-84684796 | None:intergenic |
TTTCTCTTCCTTTAGGAATT+CGG | 0.359374 | 4.4:+84683273 | MS.gene037465:CDS |
TTGGAAGGTTCCTTAGGAAT+TGG | 0.363891 | 4.4:-84685114 | None:intergenic |
GGTGGTCATCCTGGTGCATC+TGG | 0.369509 | 4.4:+84683220 | MS.gene037465:CDS |
GAGAACATTGCCTTGCAGTT+TGG | 0.378422 | 4.4:+84683342 | MS.gene037465:CDS |
TTCGGGTTTCAAAGACCATT+TGG | 0.392906 | 4.4:+84683178 | MS.gene037465:CDS |
TTAATTACTTCTTCATATGA+TGG | 0.396614 | 4.4:-84685078 | None:intergenic |
AGACCATTTGGCGGTGGAAT+GGG | 0.427291 | 4.4:+84683190 | MS.gene037465:CDS |
ATCGCAAACTTGCTATGAAA+TGG | 0.429662 | 4.4:+84681927 | MS.gene037465:CDS |
GGTGATATGGGTGGTCATCC+TGG | 0.434210 | 4.4:+84683211 | MS.gene037465:CDS |
GGCGGTGGAATGGGTGATAT+GGG | 0.438794 | 4.4:+84683199 | MS.gene037465:CDS |
ATGGTGGACCGACAATGTTC+CGG | 0.441258 | 4.4:+84683116 | MS.gene037465:CDS |
ATCAAGCCAGGTTGGAAGAA+AGG | 0.451023 | 4.4:+84684829 | MS.gene037465:CDS |
AAGACCATTTGGCGGTGGAA+TGG | 0.454672 | 4.4:+84683189 | MS.gene037465:CDS |
ATATGGTGAGGAGGGGTTGA+AGG | 0.458111 | 4.4:+84683048 | MS.gene037465:CDS |
TCGGAAAATCCACCTGCACC+TGG | 0.462806 | 4.4:-84683085 | None:intergenic |
TTTGTTCCTTTCTTCCAACC+TGG | 0.471768 | 4.4:-84684835 | None:intergenic |
AATATGTCATCCGCACTTCT+CGG | 0.475047 | 4.4:-84683145 | None:intergenic |
CCGCACTTCTCGGATTGAAC+CGG | 0.478831 | 4.4:-84683135 | None:intergenic |
CTAACAATTGAGATCAAGCC+AGG | 0.485097 | 4.4:+84684817 | MS.gene037465:CDS |
AACATTGCCTTGCAGTTTGG+AGG | 0.487226 | 4.4:+84683345 | MS.gene037465:CDS |
GGATTGAACCGGAACATTGT+CGG | 0.505215 | 4.4:-84683124 | None:intergenic |
AGAGCTGTGTATGATCAATA+TGG | 0.509203 | 4.4:+84683031 | MS.gene037465:CDS |
CAAGGCAATGTTCTCTCTAT+CGG | 0.510097 | 4.4:-84683334 | None:intergenic |
GCTGGAATCAGTAACATCTC+TGG | 0.511627 | 4.4:-84683404 | None:intergenic |
CCTCGATGGGAGGAATCTTA+CGG | 0.515468 | 4.4:+84685032 | MS.gene037465:CDS |
CCCAAATAGCTACCCTCGAT+GGG | 0.515770 | 4.4:+84685019 | MS.gene037465:CDS |
GGACTAATGATGGTGTTGAC+GGG | 0.516562 | 4.4:-84685057 | None:intergenic |
TCCCTCTTGAAGACAGTATG+AGG | 0.516733 | 4.4:-84684934 | None:intergenic |
TGGTGCATCTGGCTTTCCGA+GGG | 0.518716 | 4.4:+84683231 | MS.gene037465:CDS |
CGGAAAATCCACCTGCACCT+GGG | 0.520170 | 4.4:-84683084 | None:intergenic |
TTTAGGAATTCGGCCGGTGA+AGG | 0.528483 | 4.4:+84683283 | MS.gene037465:CDS |
CTGGTGCATCTGGCTTTCCG+AGG | 0.535834 | 4.4:+84683230 | MS.gene037465:CDS |
GCCCAAATAGCTACCCTCGA+TGG | 0.538402 | 4.4:+84685018 | MS.gene037465:CDS |
TTCATATGATGGACTAATGA+TGG | 0.538880 | 4.4:-84685067 | None:intergenic |
TTGCATTTCGATCTATCTGA+AGG | 0.539158 | 4.4:-84681880 | None:intergenic |
CTCGGAAAGCCAGATGCACC+AGG | 0.544371 | 4.4:-84683229 | None:intergenic |
CAATTGAGATCAAGCCAGGT+TGG | 0.546154 | 4.4:+84684821 | MS.gene037465:CDS |
TCACCCATTCCACCGCCAAA+TGG | 0.551823 | 4.4:-84683193 | None:intergenic |
GGGTTTCAAAGACCATTTGG+CGG | 0.553824 | 4.4:+84683181 | MS.gene037465:CDS |
TGAAGAAGTAATTAAAGGAG+AGG | 0.557340 | 4.4:+84685086 | MS.gene037465:CDS |
AGAGGGTATGCCAATTCCTA+AGG | 0.558236 | 4.4:+84685104 | MS.gene037465:CDS |
TGTCAATAATCGCTTGATGC+CGG | 0.560172 | 4.4:-84685202 | None:intergenic |
AATTCCTAAAGGAAGAGAAA+AGG | 0.566815 | 4.4:-84683270 | None:intergenic |
GGAAAATCCACCTGCACCTG+GGG | 0.568173 | 4.4:-84683083 | None:intergenic |
TTTCAAAGACCATTTGGCGG+TGG | 0.571030 | 4.4:+84683184 | MS.gene037465:CDS |
TTCACCGGCCGAATTCCTAA+AGG | 0.573122 | 4.4:-84683281 | None:intergenic |
TATGGTGAGGAGGGGTTGAA+GGG | 0.576990 | 4.4:+84683049 | MS.gene037465:CDS |
GAAGAAGTAATTAAAGGAGA+GGG | 0.582830 | 4.4:+84685087 | MS.gene037465:CDS |
CACATTGGCAGATCCTTCAC+CGG | 0.582928 | 4.4:-84683296 | None:intergenic |
TCTCTTGTAGAAGCTCTGAC+AGG | 0.585328 | 4.4:+84684988 | MS.gene037465:CDS |
TGGACTAATGATGGTGTTGA+CGG | 0.590380 | 4.4:-84685058 | None:intergenic |
TATGATCAATATGGTGAGGA+GGG | 0.591969 | 4.4:+84683040 | MS.gene037465:CDS |
TACAAATCCTCCAAACTGCA+AGG | 0.594020 | 4.4:-84683352 | None:intergenic |
CTTACATCAGAGCAGAAGAC+CGG | 0.597536 | 4.4:+84685183 | MS.gene037465:CDS |
CGTAAGATTCCTCCCATCGA+GGG | 0.600569 | 4.4:-84685031 | None:intergenic |
TCTTCCTTTAGGAATTCGGC+CGG | 0.603452 | 4.4:+84683277 | MS.gene037465:CDS |
ATGGTGAGGAGGGGTTGAAG+GGG | 0.612762 | 4.4:+84683050 | MS.gene037465:CDS |
GGTGGAATGGGTGATATGGG+TGG | 0.613503 | 4.4:+84683202 | MS.gene037465:CDS |
AAGGAAGCCTACTACAGTTG+AGG | 0.616465 | 4.4:+84684789 | MS.gene037465:intron |
CATACTGTCTTCAAGAGGGA+CGG | 0.632225 | 4.4:+84684937 | MS.gene037465:CDS |
GCCTCATACTGTCTTCAAGA+GGG | 0.644262 | 4.4:+84684933 | MS.gene037465:CDS |
AGAGATGTTACTGATTCCAG+CGG | 0.648475 | 4.4:+84683406 | MS.gene037465:CDS |
TCTTTGAAACCCGAAGAACT+CGG | 0.650196 | 4.4:-84683170 | None:intergenic |
GAGATGTTACTGATTCCAGC+GGG | 0.654951 | 4.4:+84683407 | MS.gene037465:CDS |
TCATCCCTAAACATTCCCCT+CGG | 0.655585 | 4.4:-84683247 | None:intergenic |
AGCCTCATACTGTCTTCAAG+AGG | 0.661585 | 4.4:+84684932 | MS.gene037465:CDS |
CGGTCCACCATCACCACCGT+CGG | 0.662709 | 4.4:-84683104 | None:intergenic |
GGTGCATCTGGCTTTCCGAG+GGG | 0.666004 | 4.4:+84683232 | MS.gene037465:CDS |
AAATAGCTACCCTCGATGGG+AGG | 0.668540 | 4.4:+84685022 | MS.gene037465:CDS |
CCGGTTCAATCCGAGAAGTG+CGG | 0.669023 | 4.4:+84683135 | MS.gene037465:CDS |
AAGGATCTGCCAATGTGATG+AGG | 0.672645 | 4.4:+84683302 | MS.gene037465:CDS |
CCGTAAGATTCCTCCCATCG+AGG | 0.673715 | 4.4:-84685032 | None:intergenic |
GTATGATCAATATGGTGAGG+AGG | 0.684615 | 4.4:+84683039 | MS.gene037465:CDS |
GACTAATGATGGTGTTGACG+GGG | 0.692431 | 4.4:-84685056 | None:intergenic |
GAAAATCCACCTGCACCTGG+GGG | 0.693417 | 4.4:-84683082 | None:intergenic |
TGTGTATGATCAATATGGTG+AGG | 0.703352 | 4.4:+84683036 | MS.gene037465:CDS |
GAGAAGGGAAATGAACAGAG+AGG | 0.703900 | 4.4:+84684871 | MS.gene037465:CDS |
ATGATCAATATGGTGAGGAG+GGG | 0.712167 | 4.4:+84683041 | MS.gene037465:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | CAATTTTGATAATTTTAATT+GGG | + | chr4.4:84682053-84682072 | MS.gene037465:intron | 10.0% |
!!! | TCAATTTTGATAATTTTAAT+TGG | + | chr4.4:84682052-84682071 | MS.gene037465:intron | 10.0% |
!! | AAAGAATAATTTCATGAAAT+GGG | - | chr4.4:84684270-84684289 | None:intergenic | 15.0% |
!! | ATAAACAGCTTAATTATATT+AGG | + | chr4.4:84683629-84683648 | MS.gene037465:intron | 15.0% |
!!! | TGTGTTTAATTTTATGATTT+TGG | + | chr4.4:84682596-84682615 | MS.gene037465:intron | 15.0% |
!!! | TTGTAAAGTTTTGATTTTTT+GGG | + | chr4.4:84682089-84682108 | MS.gene037465:intron | 15.0% |
!!! | TTTGTAAAGTTTTGATTTTT+TGG | + | chr4.4:84682088-84682107 | MS.gene037465:intron | 15.0% |
!!! | TTTTATGATTTTGGATAATT+TGG | + | chr4.4:84682605-84682624 | MS.gene037465:intron | 15.0% |
!! | AAATAATCAAATTTCCGTTA+AGG | + | chr4.4:84683597-84683616 | MS.gene037465:intron | 20.0% |
!! | GAAAGAATAATTTCATGAAA+TGG | - | chr4.4:84684271-84684290 | None:intergenic | 20.0% |
!! | TCATATGAAGAAGTAATTAA+AGG | + | chr4.4:84685081-84685100 | MS.gene037465:CDS | 20.0% |
!! | TGATACTTATAGTTCTTAAA+TGG | + | chr4.4:84683935-84683954 | MS.gene037465:intron | 20.0% |
!! | TTAATTACTTCTTCATATGA+TGG | - | chr4.4:84685081-84685100 | None:intergenic | 20.0% |
!!! | ATTGTTGATTTTGGATAATT+TGG | + | chr4.4:84682162-84682181 | MS.gene037465:intron | 20.0% |
!!! | ATTTTATGAGTAAATGACTT+TGG | - | chr4.4:84684446-84684465 | None:intergenic | 20.0% |
!!! | TGTAAAGTTTTGATTTTTTG+GGG | + | chr4.4:84682090-84682109 | MS.gene037465:intron | 20.0% |
!!! | TGTGTTTTTATTGTTGATTT+TGG | + | chr4.4:84682153-84682172 | MS.gene037465:intron | 20.0% |
!!! | TTGGATAATTTGGAAATTTT+GGG | + | chr4.4:84682172-84682191 | MS.gene037465:intron | 20.0% |
!!! | TTGTTATTTTCTTGTGATTT+AGG | + | chr4.4:84682801-84682820 | MS.gene037465:intron | 20.0% |
!!! | TTTGGATAATTTGGAAATTT+TGG | + | chr4.4:84682171-84682190 | MS.gene037465:intron | 20.0% |
!!! | TTTTTGTTTTGATTGTGATT+AGG | + | chr4.4:84682842-84682861 | MS.gene037465:intron | 20.0% |
! | AATAAGCTAAAAACAGCTTA+TGG | + | chr4.4:84683749-84683768 | MS.gene037465:intron | 25.0% |
! | ATAAACATGATGAAGAATGT+TGG | - | chr4.4:84684048-84684067 | None:intergenic | 25.0% |
! | GAATGAAATAGCATATAGAA+AGG | - | chr4.4:84683973-84683992 | None:intergenic | 25.0% |
! | TGCAATAAGACATGTTTAAA+TGG | + | chr4.4:84684160-84684179 | MS.gene037465:intron | 25.0% |
! | TTAGGATTACTTGGAAATTT+CGG | + | chr4.4:84682687-84682706 | MS.gene037465:intron | 25.0% |
!! | CAAAATAATTCTTCTTTTGC+TGG | + | chr4.4:84683992-84684011 | MS.gene037465:intron | 25.0% |
!! | TCTTGTGATTTAGAATCATT+TGG | + | chr4.4:84682949-84682968 | MS.gene037465:intron | 25.0% |
!! | TGGATAATTTGGAAATTTTG+GGG | + | chr4.4:84682173-84682192 | MS.gene037465:intron | 25.0% |
!! | TGTATGTTTTCTTATTCTGA+AGG | + | chr4.4:84684770-84684789 | MS.gene037465:intron | 25.0% |
!! | TTAGAATCATTTGGAATTGT+TGG | + | chr4.4:84682958-84682977 | MS.gene037465:intron | 25.0% |
!! | TTGTGTTTTTCTTGTGATTT+AGG | + | chr4.4:84682457-84682476 | MS.gene037465:intron | 25.0% |
!! | TTGTGTTTTTCTTGTGATTT+TGG | + | chr4.4:84682457-84682476 | MS.gene037465:intron | 25.0% |
!! | TTTGGATAATTTGGAATTGT+GGG | + | chr4.4:84682614-84682633 | MS.gene037465:intron | 25.0% |
!! | TTTTGTGATTTTGGATCATT+TGG | + | chr4.4:84682534-84682553 | MS.gene037465:intron | 25.0% |
!!! | AGGTTTACAATTTTAGCTTA+TGG | + | chr4.4:84682502-84682521 | MS.gene037465:intron | 25.0% |
!!! | ATTTGGAATTGTGAAGTTTT+AGG | + | chr4.4:84682402-84682421 | MS.gene037465:intron | 25.0% |
!!! | GATCATTTGTTTGATTTTTG+GGG | + | chr4.4:84682249-84682268 | MS.gene037465:intron | 25.0% |
!!! | GGATCATTTGTTTGATTTTT+GGG | + | chr4.4:84682248-84682267 | MS.gene037465:intron | 25.0% |
!!! | GGTGTTTAATTTTGTGTTTT+TGG | + | chr4.4:84682215-84682234 | MS.gene037465:intron | 25.0% |
!!! | GGTTTACAATTTTAGCTTAT+GGG | + | chr4.4:84682503-84682522 | MS.gene037465:intron | 25.0% |
!!! | GTTGTTTTCATAAGCTATAT+TGG | + | chr4.4:84683714-84683733 | MS.gene037465:intron | 25.0% |
!!! | GTTTACAATTTTAGCTTATG+GGG | + | chr4.4:84682504-84682523 | MS.gene037465:intron | 25.0% |
!!! | GTTTTTTTCGTTGTTGATTT+TGG | + | chr4.4:84682310-84682329 | MS.gene037465:intron | 25.0% |
!!! | TAGAAAGTGTTGTCATATAA+CGG | - | chr4.4:84684606-84684625 | None:intergenic | 25.0% |
!!! | TCTGGAAATCTTCATTTTTT+TGG | - | chr4.4:84683389-84683408 | None:intergenic | 25.0% |
!!! | TGAGATGTTTTTGAAATGTT+GGG | + | chr4.4:84682908-84682927 | MS.gene037465:intron | 25.0% |
!!! | TGGATCATTTGTTTGATTTT+TGG | + | chr4.4:84682247-84682266 | MS.gene037465:intron | 25.0% |
!!! | TGTATTTTGTTATGTGTTGT+TGG | + | chr4.4:84683529-84683548 | MS.gene037465:intron | 25.0% |
!!! | TGTGTTTTTCTTGTTGATTT+TGG | + | chr4.4:84682227-84682246 | MS.gene037465:intron | 25.0% |
!!! | TTTGATTTTTTGGGGTTTTT+GGG | + | chr4.4:84682098-84682117 | MS.gene037465:intron | 25.0% |
!!! | TTTGGAATTGTGAAGTTTTA+GGG | + | chr4.4:84682403-84682422 | MS.gene037465:intron | 25.0% |
!!! | TTTTGATTTTTTGGGGTTTT+TGG | + | chr4.4:84682097-84682116 | MS.gene037465:intron | 25.0% |
!!! | TTTTGGATAATTTGGAATTG+TGG | + | chr4.4:84682613-84682632 | MS.gene037465:intron | 25.0% |
AATTCCTAAAGGAAGAGAAA+AGG | - | chr4.4:84683273-84683292 | None:intergenic | 30.0% | |
AGTTTGGAGGATTTGTATAA+AGG | + | chr4.4:84683358-84683377 | MS.gene037465:CDS | 30.0% | |
ATAATAAAAACAAGGTCTGC+AGG | - | chr4.4:84684904-84684923 | None:intergenic | 30.0% | |
CAATGCAACTAGGTTAATAT+AGG | - | chr4.4:84683458-84683477 | None:intergenic | 30.0% | |
CTATATTAACCTAGTTGCAT+TGG | + | chr4.4:84683456-84683475 | MS.gene037465:intron | 30.0% | |
GAAGAAGTAATTAAAGGAGA+GGG | + | chr4.4:84685087-84685106 | MS.gene037465:CDS | 30.0% | |
GTGATGTGATGTAACTATTA+AGG | + | chr4.4:84684113-84684132 | MS.gene037465:intron | 30.0% | |
GTTTGGAGGATTTGTATAAA+GGG | + | chr4.4:84683359-84683378 | MS.gene037465:CDS | 30.0% | |
TAGGATTACTTGGAAATTTC+GGG | + | chr4.4:84682688-84682707 | MS.gene037465:intron | 30.0% | |
TATTAGAGCTGTGAATTGAA+TGG | + | chr4.4:84684731-84684750 | MS.gene037465:intron | 30.0% | |
TCAAATAAGCCAATCTAAAC+AGG | + | chr4.4:84683840-84683859 | MS.gene037465:intron | 30.0% | |
TCTCGTCGATAATAAAAACA+AGG | - | chr4.4:84684912-84684931 | None:intergenic | 30.0% | |
TGAAGAAGTAATTAAAGGAG+AGG | + | chr4.4:84685086-84685105 | MS.gene037465:CDS | 30.0% | |
TTATTATGGCCTGTTTAGAT+TGG | - | chr4.4:84683852-84683871 | None:intergenic | 30.0% | |
TTGTCTAAAAAACTTGAGTC+TGG | - | chr4.4:84684214-84684233 | None:intergenic | 30.0% | |
! | AGGAACAAAGATAACTTTTC+CGG | + | chr4.4:84684849-84684868 | MS.gene037465:CDS | 30.0% |
! | AGGGTTACAATTTGGAATTA+AGG | + | chr4.4:84682571-84682590 | MS.gene037465:intron | 30.0% |
! | AGTGATTTCGATTTGTGAAT+AGG | + | chr4.4:84682988-84683007 | MS.gene037465:intron | 30.0% |
! | ATTTGGAATTGTGAAGTTTC+AGG | + | chr4.4:84682551-84682570 | MS.gene037465:intron | 30.0% |
! | GGATAATTTGGAAATTTTGG+GGG | + | chr4.4:84682174-84682193 | MS.gene037465:intron | 30.0% |
! | GGGTTACAATTTGAAATGTT+GGG | + | chr4.4:84682769-84682788 | MS.gene037465:intron | 30.0% |
! | GGTTACAATTTGAAATGTTG+GGG | + | chr4.4:84682770-84682789 | MS.gene037465:intron | 30.0% |
! | GGTTACAATTTGGAATTATG+AGG | + | chr4.4:84682710-84682729 | MS.gene037465:intron | 30.0% |
! | GTTACAATTTGAAATGTTGG+GGG | + | chr4.4:84682771-84682790 | MS.gene037465:intron | 30.0% |
! | GTTGCATAATTTGGAATGTT+GGG | + | chr4.4:84682271-84682290 | MS.gene037465:intron | 30.0% |
! | TCTTGTGATTTAGGATCATT+TGG | + | chr4.4:84682810-84682829 | MS.gene037465:intron | 30.0% |
! | TCTTGTGATTTAGGATTACT+TGG | + | chr4.4:84682678-84682697 | MS.gene037465:intron | 30.0% |
! | TGGGTTACAATTTGAAATGT+TGG | + | chr4.4:84682768-84682787 | MS.gene037465:intron | 30.0% |
! | TTCAGAGATTTGCTTGAATT+TGG | - | chr4.4:84681993-84682012 | None:intergenic | 30.0% |
! | TTCTTGTGATTTTGGACATT+TGG | + | chr4.4:84682465-84682484 | MS.gene037465:intron | 30.0% |
! | TTGCATAATTTGGAATGTTG+GGG | + | chr4.4:84682272-84682291 | MS.gene037465:intron | 30.0% |
! | TTGGATCATTTGGACATTTT+GGG | + | chr4.4:84682329-84682348 | MS.gene037465:intron | 30.0% |
! | TTGTTATTAGGGTTCTTATC+AGG | - | chr4.4:84681956-84681975 | None:intergenic | 30.0% |
! | TTTCTCTTCCTTTAGGAATT+CGG | + | chr4.4:84683273-84683292 | MS.gene037465:CDS | 30.0% |
! | TTTGGAATTGTGAAGTTTCA+GGG | + | chr4.4:84682552-84682571 | MS.gene037465:intron | 30.0% |
! | TTTGGATCAGTTGGATTTTT+GGG | + | chr4.4:84682749-84682768 | MS.gene037465:intron | 30.0% |
! | TTTGGATCATTTGGACATTT+TGG | + | chr4.4:84682328-84682347 | MS.gene037465:intron | 30.0% |
! | TTTTGGATCAGTTGGATTTT+TGG | + | chr4.4:84682748-84682767 | MS.gene037465:intron | 30.0% |
!! | CAAAATCTGCCACTTTATTA+TGG | - | chr4.4:84683866-84683885 | None:intergenic | 30.0% |
!! | CAGCATCTTTCTTGTTATTA+GGG | - | chr4.4:84681967-84681986 | None:intergenic | 30.0% |
!! | GGTGTTTGATTTTGTGATTT+TGG | + | chr4.4:84682525-84682544 | MS.gene037465:intron | 30.0% |
!! | GTGTTTGATTTTGGATCATT+TGG | + | chr4.4:84682385-84682404 | MS.gene037465:intron | 30.0% |
!! | TCAGCATCTTTCTTGTTATT+AGG | - | chr4.4:84681968-84681987 | None:intergenic | 30.0% |
!! | TTCATATGATGGACTAATGA+TGG | - | chr4.4:84685070-84685089 | None:intergenic | 30.0% |
!!! | ATTTGGAGTTTTGAGGTTTT+AGG | + | chr4.4:84682482-84682501 | MS.gene037465:intron | 30.0% |
!!! | ATTTTTGGGGTTGCATAATT+TGG | + | chr4.4:84682262-84682281 | MS.gene037465:intron | 30.0% |
!!! | GAAGTTTTAGGGTTACAATT+TGG | + | chr4.4:84682414-84682433 | MS.gene037465:intron | 30.0% |
!!! | GAGATGTTTTTGAAATGTTG+GGG | + | chr4.4:84682909-84682928 | MS.gene037465:intron | 30.0% |
!!! | GGAAATCTTCATTTTTTTGG+TGG | - | chr4.4:84683386-84683405 | None:intergenic | 30.0% |
!!! | GTGAGATGTTTTTGAAATGT+TGG | + | chr4.4:84682907-84682926 | MS.gene037465:intron | 30.0% |
!!! | GTTGTTGATTTTGGATCATT+TGG | + | chr4.4:84682319-84682338 | MS.gene037465:intron | 30.0% |
!!! | TTGATTTTTTGGGGTTTTTG+GGG | + | chr4.4:84682099-84682118 | MS.gene037465:intron | 30.0% |
!!! | TTTTGTGTTTTTGGATCAGT+TGG | + | chr4.4:84682740-84682759 | MS.gene037465:intron | 30.0% |
AACCAATCCAAATTGTAACC+CGG | - | chr4.4:84682645-84682664 | None:intergenic | 35.0% | |
AGAATTTCCTCAACTGTAGT+AGG | - | chr4.4:84684799-84684818 | None:intergenic | 35.0% | |
AGAGCTGTGTATGATCAATA+TGG | + | chr4.4:84683031-84683050 | MS.gene037465:CDS | 35.0% | |
AGGATTACTTGGAAATTTCG+GGG | + | chr4.4:84682689-84682708 | MS.gene037465:intron | 35.0% | |
ATTAAGCTGTTTATCCGAAC+AGG | - | chr4.4:84683623-84683642 | None:intergenic | 35.0% | |
CCAATAAAACCAATGCAACT+AGG | - | chr4.4:84683468-84683487 | None:intergenic | 35.0% | |
CTAAACAGGCCATAATAAAG+TGG | + | chr4.4:84683854-84683873 | MS.gene037465:intron | 35.0% | |
GAAATTTCGGGGTTACAATT+TGG | + | chr4.4:84682700-84682719 | MS.gene037465:intron | 35.0% | |
GAAGTTTCAGGGTTACAATT+TGG | + | chr4.4:84682563-84682582 | MS.gene037465:intron | 35.0% | |
GATGTATTCAAAAGCTGTGT+TGG | + | chr4.4:84684531-84684550 | MS.gene037465:intron | 35.0% | |
GGGGTACAATTTGAATTGAT+GGG | + | chr4.4:84682193-84682212 | MS.gene037465:intron | 35.0% | |
GGGTACAATTTGAATTGATG+GGG | + | chr4.4:84682194-84682213 | MS.gene037465:intron | 35.0% | |
TAAAGACTTGTGAGTCTGTT+TGG | - | chr4.4:84683805-84683824 | None:intergenic | 35.0% | |
TATGATCAATATGGTGAGGA+GGG | + | chr4.4:84683040-84683059 | MS.gene037465:CDS | 35.0% | |
TGTGTATGATCAATATGGTG+AGG | + | chr4.4:84683036-84683055 | MS.gene037465:CDS | 35.0% | |
TTATGGAAACAGCTTATGAC+AGG | - | chr4.4:84683776-84683795 | None:intergenic | 35.0% | |
TTGCATTTCGATCTATCTGA+AGG | - | chr4.4:84681883-84681902 | None:intergenic | 35.0% | |
! | AAAGATAACTTTTCCGGAGA+AGG | + | chr4.4:84684855-84684874 | MS.gene037465:CDS | 35.0% |
! | AAGATAACTTTTCCGGAGAA+GGG | + | chr4.4:84684856-84684875 | MS.gene037465:CDS | 35.0% |
! | ACATATTTTCCGAGTTCTTC+GGG | + | chr4.4:84683161-84683180 | MS.gene037465:CDS | 35.0% |
! | AGGGTTACAATTTGGAATGA+TGG | + | chr4.4:84682422-84682441 | MS.gene037465:intron | 35.0% |
! | ATGACCTTTTCTCTTCCTTT+AGG | + | chr4.4:84683266-84683285 | MS.gene037465:CDS | 35.0% |
! | GACATATTTTCCGAGTTCTT+CGG | + | chr4.4:84683160-84683179 | MS.gene037465:CDS | 35.0% |
! | GCTTCAGTTCTACTATTTTC+TGG | - | chr4.4:84684369-84684388 | None:intergenic | 35.0% |
! | GGGTTACAATTTGGAATGAT+GGG | + | chr4.4:84682423-84682442 | MS.gene037465:intron | 35.0% |
! | GGTTACAATTTGGAATGATG+GGG | + | chr4.4:84682424-84682443 | MS.gene037465:intron | 35.0% |
! | GGTTGCATAATTTGGAATGT+TGG | + | chr4.4:84682270-84682289 | MS.gene037465:intron | 35.0% |
! | TGCATAATTTGGAATGTTGG+GGG | + | chr4.4:84682273-84682292 | MS.gene037465:intron | 35.0% |
! | TGGATCATTTGGACATTTTG+GGG | + | chr4.4:84682330-84682349 | MS.gene037465:intron | 35.0% |
!! | ATCGCAAACTTGCTATGAAA+TGG | + | chr4.4:84681927-84681946 | MS.gene037465:CDS | 35.0% |
!! | TTTGGAATTGTGGGTTTTTC+CGG | + | chr4.4:84682623-84682642 | MS.gene037465:intron | 35.0% |
!! | TTTGGACATTTGGAGTTTTG+AGG | + | chr4.4:84682475-84682494 | MS.gene037465:intron | 35.0% |
!!! | CCTAGTTGCATTGGTTTTAT+TGG | + | chr4.4:84683465-84683484 | MS.gene037465:intron | 35.0% |
!!! | TGCAAGCAATTTTAGCTGAT+GGG | + | chr4.4:84682362-84682381 | MS.gene037465:intron | 35.0% |
!!! | TTGCAAGCAATTTTAGCTGA+TGG | + | chr4.4:84682361-84682380 | MS.gene037465:intron | 35.0% |
!!! | TTGGACATTTTGGGGTTTTT+GGG | + | chr4.4:84682338-84682357 | MS.gene037465:intron | 35.0% |
!!! | TTTGGACATTTTGGGGTTTT+TGG | + | chr4.4:84682337-84682356 | MS.gene037465:intron | 35.0% |
AAACAAGGTCTGCAGGTATA+AGG | - | chr4.4:84684897-84684916 | None:intergenic | 40.0% | |
AATATGTCATCCGCACTTCT+CGG | - | chr4.4:84683148-84683167 | None:intergenic | 40.0% | |
AATTTCCGTTAAGGCCTGTT+CGG | + | chr4.4:84683606-84683625 | MS.gene037465:intron | 40.0% | |
AGTCTGTTTGGAAGAGCTTA+TGG | - | chr4.4:84683793-84683812 | None:intergenic | 40.0% | |
ATGATCAATATGGTGAGGAG+GGG | + | chr4.4:84683041-84683060 | MS.gene037465:CDS | 40.0% | |
CAAGGCAATGTTCTCTCTAT+CGG | - | chr4.4:84683337-84683356 | None:intergenic | 40.0% | |
CCTAAGGAACCTTCCAAAAA+GGG | + | chr4.4:84685120-84685139 | MS.gene037465:CDS | 40.0% | |
CCTTCAATTTCCTACAGCAT+CGG | - | chr4.4:84684308-84684327 | None:intergenic | 40.0% | |
CTAACAATTGAGATCAAGCC+AGG | + | chr4.4:84684817-84684836 | MS.gene037465:CDS | 40.0% | |
GTATGATCAATATGGTGAGG+AGG | + | chr4.4:84683039-84683058 | MS.gene037465:CDS | 40.0% | |
TAAAATTCCGCTGTGCTGTA+GGG | + | chr4.4:84684660-84684679 | MS.gene037465:intron | 40.0% | |
TACAAATCCTCCAAACTGCA+AGG | - | chr4.4:84683355-84683374 | None:intergenic | 40.0% | |
TCCTAAGGAACCTTCCAAAA+AGG | + | chr4.4:84685119-84685138 | MS.gene037465:CDS | 40.0% | |
TGATCATACACCTCTCTCTT+TGG | - | chr4.4:84682882-84682901 | None:intergenic | 40.0% | |
TGCTCTGATGTAAGTCTTGA+TGG | - | chr4.4:84685177-84685196 | None:intergenic | 40.0% | |
TGTCAATAATCGCTTGATGC+CGG | - | chr4.4:84685205-84685224 | None:intergenic | 40.0% | |
TTAAAATTCCGCTGTGCTGT+AGG | + | chr4.4:84684659-84684678 | MS.gene037465:intron | 40.0% | |
TTCCGGGTTACAATTTGGAT+TGG | + | chr4.4:84682640-84682659 | MS.gene037465:intron | 40.0% | |
TTGGAAGGTTCCTTAGGAAT+TGG | - | chr4.4:84685117-84685136 | None:intergenic | 40.0% | |
TTTATCCGAACAGGCCTTAA+CGG | - | chr4.4:84683614-84683633 | None:intergenic | 40.0% | |
TTTGTTCCTTTCTTCCAACC+TGG | - | chr4.4:84684838-84684857 | None:intergenic | 40.0% | |
! | AGAGAGGTGTATGATCAGTA+TGG | + | chr4.4:84682885-84682904 | MS.gene037465:intron | 40.0% |
! | ATAATTTGGAATGTTGGGGG+TGG | + | chr4.4:84682276-84682295 | MS.gene037465:intron | 40.0% |
! | CTCAAGTTTCCCTTTTTGGA+AGG | - | chr4.4:84685132-84685151 | None:intergenic | 40.0% |
! | GACTCTCAAGTTTCCCTTTT+TGG | - | chr4.4:84685136-84685155 | None:intergenic | 40.0% |
! | GGGGGTACAATTTGAATTGA+TGG | + | chr4.4:84682192-84682211 | MS.gene037465:intron | 40.0% |
! | GGGGTTGTAATTTGCATGTT+GGG | + | chr4.4:84682118-84682137 | MS.gene037465:intron | 40.0% |
! | GGTTTTTCCGGGTTACAATT+TGG | + | chr4.4:84682635-84682654 | MS.gene037465:intron | 40.0% |
! | TAAAGTGGCAGATTTTGCGA+TGG | + | chr4.4:84683869-84683888 | MS.gene037465:intron | 40.0% |
! | TCATACACAGCTCTCTTTTG+TGG | - | chr4.4:84683025-84683044 | None:intergenic | 40.0% |
! | TGCACTTTTCCTCATCACAT+TGG | - | chr4.4:84683314-84683333 | None:intergenic | 40.0% |
! | TGGACTAATGATGGTGTTGA+CGG | - | chr4.4:84685061-84685080 | None:intergenic | 40.0% |
! | TGGGGTTGTAATTTGCATGT+TGG | + | chr4.4:84682117-84682136 | MS.gene037465:intron | 40.0% |
! | TTCGGGTTTCAAAGACCATT+TGG | + | chr4.4:84683178-84683197 | MS.gene037465:CDS | 40.0% |
! | TTGGAATTGTGGGTTTTTCC+GGG | + | chr4.4:84682624-84682643 | MS.gene037465:intron | 40.0% |
!! | AGAGATGTTACTGATTCCAG+CGG | + | chr4.4:84683406-84683425 | MS.gene037465:CDS | 40.0% |
!! | GTTCTACTATTTTCTGGCAC+AGG | - | chr4.4:84684363-84684382 | None:intergenic | 40.0% |
!! | TCTTTGAAACCCGAAGAACT+CGG | - | chr4.4:84683173-84683192 | None:intergenic | 40.0% |
!!! | GCAAGCAATTTTAGCTGATG+GGG | + | chr4.4:84682363-84682382 | MS.gene037465:intron | 40.0% |
AAACTAGAAAACTCACCCGC+TGG | - | chr4.4:84683425-84683444 | None:intergenic | 45.0% | |
AACATTGCCTTGCAGTTTGG+AGG | + | chr4.4:84683345-84683364 | MS.gene037465:CDS | 45.0% | |
AAGGAAGCCTACTACAGTTG+AGG | + | chr4.4:84684789-84684808 | MS.gene037465:intron | 45.0% | |
AAGGATCTGCCAATGTGATG+AGG | + | chr4.4:84683302-84683321 | MS.gene037465:CDS | 45.0% | |
AGCCTCATACTGTCTTCAAG+AGG | + | chr4.4:84684932-84684951 | MS.gene037465:CDS | 45.0% | |
CAATTGAGATCAAGCCAGGT+TGG | + | chr4.4:84684821-84684840 | MS.gene037465:CDS | 45.0% | |
CATACTGTCTTCAAGAGGGA+CGG | + | chr4.4:84684937-84684956 | MS.gene037465:CDS | 45.0% | |
CCGATGCTGTAGGAAATTGA+AGG | + | chr4.4:84684305-84684324 | MS.gene037465:intron | 45.0% | |
CTCTGTTCATTTCCCTTCTC+CGG | - | chr4.4:84684871-84684890 | None:intergenic | 45.0% | |
CTTACATCAGAGCAGAAGAC+CGG | + | chr4.4:84685183-84685202 | MS.gene037465:CDS | 45.0% | |
CTTTCCGAGGGGAATGTTTA+GGG | + | chr4.4:84683243-84683262 | MS.gene037465:CDS | 45.0% | |
GAGAACATTGCCTTGCAGTT+TGG | + | chr4.4:84683342-84683361 | MS.gene037465:CDS | 45.0% | |
GAGAAGGGAAATGAACAGAG+AGG | + | chr4.4:84684871-84684890 | MS.gene037465:CDS | 45.0% | |
GAGTGATCAACCAAAGAGAG+AGG | + | chr4.4:84682869-84682888 | MS.gene037465:intron | 45.0% | |
GCCTCATACTGTCTTCAAGA+GGG | + | chr4.4:84684933-84684952 | MS.gene037465:CDS | 45.0% | |
GCTGGAATCAGTAACATCTC+TGG | - | chr4.4:84683407-84683426 | None:intergenic | 45.0% | |
GGATTGAACCGGAACATTGT+CGG | - | chr4.4:84683127-84683146 | None:intergenic | 45.0% | |
GGGTTTCAAAGACCATTTGG+CGG | + | chr4.4:84683181-84683200 | MS.gene037465:CDS | 45.0% | |
TCATCCCTAAACATTCCCCT+CGG | - | chr4.4:84683250-84683269 | None:intergenic | 45.0% | |
TCCCTCTTGAAGACAGTATG+AGG | - | chr4.4:84684937-84684956 | None:intergenic | 45.0% | |
TTTCAAAGACCATTTGGCGG+TGG | + | chr4.4:84683184-84683203 | MS.gene037465:CDS | 45.0% | |
! | AGAGGGTATGCCAATTCCTA+AGG | + | chr4.4:84685104-84685123 | MS.gene037465:CDS | 45.0% |
! | ATCAAGCCAGGTTGGAAGAA+AGG | + | chr4.4:84684829-84684848 | MS.gene037465:CDS | 45.0% |
! | TCTCTTGTAGAAGCTCTGAC+AGG | + | chr4.4:84684988-84685007 | MS.gene037465:CDS | 45.0% |
! | TCTTCCTTTAGGAATTCGGC+CGG | + | chr4.4:84683277-84683296 | MS.gene037465:CDS | 45.0% |
!! | CCCTTTTTGGAAGGTTCCTT+AGG | - | chr4.4:84685123-84685142 | None:intergenic | 45.0% |
!! | GACTAATGATGGTGTTGACG+GGG | - | chr4.4:84685059-84685078 | None:intergenic | 45.0% |
!! | GAGATGTTACTGATTCCAGC+GGG | + | chr4.4:84683407-84683426 | MS.gene037465:CDS | 45.0% |
!! | GCTGATGGGGTGTTTGATTT+TGG | + | chr4.4:84682376-84682395 | MS.gene037465:intron | 45.0% |
!! | GGACTAATGATGGTGTTGAC+GGG | - | chr4.4:84685060-84685079 | None:intergenic | 45.0% |
AAATAGCTACCCTCGATGGG+AGG | + | chr4.4:84685022-84685041 | MS.gene037465:CDS | 50.0% | |
AAGACCATTTGGCGGTGGAA+TGG | + | chr4.4:84683189-84683208 | MS.gene037465:CDS | 50.0% | |
AGACCATTTGGCGGTGGAAT+GGG | + | chr4.4:84683190-84683209 | MS.gene037465:CDS | 50.0% | |
ATATGGTGAGGAGGGGTTGA+AGG | + | chr4.4:84683048-84683067 | MS.gene037465:CDS | 50.0% | |
CACATTGGCAGATCCTTCAC+CGG | - | chr4.4:84683299-84683318 | None:intergenic | 50.0% | |
CATTGTCTAGCCGATGCTGT+AGG | + | chr4.4:84684295-84684314 | MS.gene037465:intron | 50.0% | |
CCCAAATAGCTACCCTCGAT+GGG | + | chr4.4:84685019-84685038 | MS.gene037465:CDS | 50.0% | |
CCCATCGAGGGTAGCTATTT+GGG | - | chr4.4:84685022-84685041 | None:intergenic | 50.0% | |
CCTCGATGGGAGGAATCTTA+CGG | + | chr4.4:84685032-84685051 | MS.gene037465:CDS | 50.0% | |
CGTAAGATTCCTCCCATCGA+GGG | - | chr4.4:84685034-84685053 | None:intergenic | 50.0% | |
GCTTTCCGAGGGGAATGTTT+AGG | + | chr4.4:84683242-84683261 | MS.gene037465:CDS | 50.0% | |
TATGGTGAGGAGGGGTTGAA+GGG | + | chr4.4:84683049-84683068 | MS.gene037465:CDS | 50.0% | |
TCCCATCGAGGGTAGCTATT+TGG | - | chr4.4:84685023-84685042 | None:intergenic | 50.0% | |
TTCACCGGCCGAATTCCTAA+AGG | - | chr4.4:84683284-84683303 | None:intergenic | 50.0% | |
TTTAGGAATTCGGCCGGTGA+AGG | + | chr4.4:84683283-84683302 | MS.gene037465:CDS | 50.0% | |
! | TGAGTATCGCAGAACAGCAG+CGG | + | chr4.4:84684632-84684651 | MS.gene037465:intron | 50.0% |
!! | ATGGTGGACCGACAATGTTC+CGG | + | chr4.4:84683116-84683135 | MS.gene037465:CDS | 50.0% |
ATAGCAGCCCTACAGCACAG+CGG | - | chr4.4:84684670-84684689 | None:intergenic | 55.0% | |
ATGGTGAGGAGGGGTTGAAG+GGG | + | chr4.4:84683050-84683069 | MS.gene037465:CDS | 55.0% | |
CCGCACTTCTCGGATTGAAC+CGG | - | chr4.4:84683138-84683157 | None:intergenic | 55.0% | |
CCGGTTCAATCCGAGAAGTG+CGG | + | chr4.4:84683135-84683154 | MS.gene037465:CDS | 55.0% | |
CCGTAAGATTCCTCCCATCG+AGG | - | chr4.4:84685035-84685054 | None:intergenic | 55.0% | |
CGGAAAATCCACCTGCACCT+GGG | - | chr4.4:84683087-84683106 | None:intergenic | 55.0% | |
GAAAATCCACCTGCACCTGG+GGG | - | chr4.4:84683085-84683104 | None:intergenic | 55.0% | |
GCCCAAATAGCTACCCTCGA+TGG | + | chr4.4:84685018-84685037 | MS.gene037465:CDS | 55.0% | |
GGAAAATCCACCTGCACCTG+GGG | - | chr4.4:84683086-84683105 | None:intergenic | 55.0% | |
GGCGGTGGAATGGGTGATAT+GGG | + | chr4.4:84683199-84683218 | MS.gene037465:CDS | 55.0% | |
GGTGATATGGGTGGTCATCC+TGG | + | chr4.4:84683211-84683230 | MS.gene037465:CDS | 55.0% | |
GGTGGAATGGGTGATATGGG+TGG | + | chr4.4:84683202-84683221 | MS.gene037465:CDS | 55.0% | |
TCACCCATTCCACCGCCAAA+TGG | - | chr4.4:84683196-84683215 | None:intergenic | 55.0% | |
TCGGAAAATCCACCTGCACC+TGG | - | chr4.4:84683088-84683107 | None:intergenic | 55.0% | |
TGGCGGTGGAATGGGTGATA+TGG | + | chr4.4:84683198-84683217 | MS.gene037465:CDS | 55.0% | |
! | GGATTTTCCGACGGTGGTGA+TGG | + | chr4.4:84683097-84683116 | MS.gene037465:CDS | 55.0% |
!! | GGTGCAGGTGGATTTTCCGA+CGG | + | chr4.4:84683088-84683107 | MS.gene037465:CDS | 55.0% |
!! | TGGTGCATCTGGCTTTCCGA+GGG | + | chr4.4:84683231-84683250 | MS.gene037465:CDS | 55.0% |
!!! | TTTTCCGACGGTGGTGATGG+TGG | + | chr4.4:84683100-84683119 | MS.gene037465:CDS | 55.0% |
CTCGGAAAGCCAGATGCACC+AGG | - | chr4.4:84683232-84683251 | None:intergenic | 60.0% | |
GGTGGTCATCCTGGTGCATC+TGG | + | chr4.4:84683220-84683239 | MS.gene037465:CDS | 60.0% | |
!! | CTGGTGCATCTGGCTTTCCG+AGG | + | chr4.4:84683230-84683249 | MS.gene037465:CDS | 60.0% |
!! | GCAGGTGGATTTTCCGACGG+TGG | + | chr4.4:84683091-84683110 | MS.gene037465:CDS | 60.0% |
!! | GGTGCATCTGGCTTTCCGAG+GGG | + | chr4.4:84683232-84683251 | MS.gene037465:CDS | 60.0% |
AATCCACCTGCACCTGGGGG+AGG | - | chr4.4:84683082-84683101 | None:intergenic | 65.0% | |
CGGTCCACCATCACCACCGT+CGG | - | chr4.4:84683107-84683126 | None:intergenic | 65.0% | |
AAGGGGCAGATGCCTCCCCC+AGG | + | chr4.4:84683067-84683086 | MS.gene037465:CDS | 70.0% | |
ATGCCTCCCCCAGGTGCAGG+TGG | + | chr4.4:84683076-84683095 | MS.gene037465:CDS | 70.0% | |
CAGATGCCTCCCCCAGGTGC+AGG | + | chr4.4:84683073-84683092 | MS.gene037465:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 84681857 | 84685233 | 84681857 | ID=MS.gene037465 |
chr4.4 | mRNA | 84681857 | 84685233 | 84681857 | ID=MS.gene037465.t1;Parent=MS.gene037465 |
chr4.4 | exon | 84681857 | 84682021 | 84681857 | ID=MS.gene037465.t1.exon1;Parent=MS.gene037465.t1 |
chr4.4 | CDS | 84681857 | 84682021 | 84681857 | ID=cds.MS.gene037465.t1;Parent=MS.gene037465.t1 |
chr4.4 | exon | 84683010 | 84683428 | 84683010 | ID=MS.gene037465.t1.exon2;Parent=MS.gene037465.t1 |
chr4.4 | CDS | 84683010 | 84683428 | 84683010 | ID=cds.MS.gene037465.t1;Parent=MS.gene037465.t1 |
chr4.4 | exon | 84684792 | 84685233 | 84684792 | ID=MS.gene037465.t1.exon3;Parent=MS.gene037465.t1 |
chr4.4 | CDS | 84684792 | 84685233 | 84684792 | ID=cds.MS.gene037465.t1;Parent=MS.gene037465.t1 |
Gene Sequence |
Protein sequence |