Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50013.t1 | XP_013454832.1 | 99.4 | 341 | 2 | 0 | 1 | 341 | 1 | 341 | 1.80E-191 | 678.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50013.t1 | Q5R8J8 | 45.6 | 355 | 161 | 10 | 1 | 341 | 1 | 337 | 8.0e-71 | 268.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50013.t1 | G8A2L9 | 99.4 | 341 | 2 | 0 | 1 | 341 | 1 | 341 | 1.3e-191 | 678.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene50013 | 0.826371 | 2.81E-54 | -1.69E-46 |
| MS.gene049208 | MS.gene50013 | 0.807697 | 4.45E-50 | -1.69E-46 |
| MS.gene049350 | MS.gene50013 | 0.853776 | 1.91E-61 | -1.69E-46 |
| MS.gene049411 | MS.gene50013 | 0.803143 | 4.01E-49 | -1.69E-46 |
| MS.gene049711 | MS.gene50013 | 0.823378 | 1.43E-53 | -1.69E-46 |
| MS.gene049807 | MS.gene50013 | 0.864354 | 1.29E-64 | -1.69E-46 |
| MS.gene049887 | MS.gene50013 | 0.828986 | 6.63E-55 | -1.69E-46 |
| MS.gene050437 | MS.gene50013 | 0.813419 | 2.58E-51 | -1.69E-46 |
| MS.gene050689 | MS.gene50013 | 0.818767 | 1.65E-52 | -1.69E-46 |
| MS.gene050752 | MS.gene50013 | 0.858572 | 7.51E-63 | -1.69E-46 |
| MS.gene050838 | MS.gene50013 | 0.86217 | 6.13E-64 | -1.69E-46 |
| MS.gene050901 | MS.gene50013 | 0.80288 | 4.55E-49 | -1.69E-46 |
| MS.gene050945 | MS.gene50013 | 0.817919 | 2.57E-52 | -1.69E-46 |
| MS.gene050955 | MS.gene50013 | 0.837852 | 4.07E-57 | -1.69E-46 |
| MS.gene051003 | MS.gene50013 | 0.819325 | 1.23E-52 | -1.69E-46 |
| MS.gene051234 | MS.gene50013 | 0.864256 | 1.39E-64 | -1.69E-46 |
| MS.gene051343 | MS.gene50013 | 0.843982 | 1.00E-58 | -1.69E-46 |
| MS.gene051450 | MS.gene50013 | 0.800119 | 1.67E-48 | -1.69E-46 |
| MS.gene051642 | MS.gene50013 | 0.800947 | 1.13E-48 | -1.69E-46 |
| MS.gene051676 | MS.gene50013 | 0.81288 | 3.39E-51 | -1.69E-46 |
| MS.gene051700 | MS.gene50013 | 0.808509 | 2.99E-50 | -1.69E-46 |
| MS.gene051748 | MS.gene50013 | 0.801214 | 1.00E-48 | -1.69E-46 |
| MS.gene051885 | MS.gene50013 | 0.823097 | 1.66E-53 | -1.69E-46 |
| MS.gene051902 | MS.gene50013 | 0.821605 | 3.69E-53 | -1.69E-46 |
| MS.gene051903 | MS.gene50013 | 0.808458 | 3.07E-50 | -1.69E-46 |
| MS.gene051975 | MS.gene50013 | 0.83567 | 1.47E-56 | -1.69E-46 |
| MS.gene052072 | MS.gene50013 | 0.828354 | 9.42E-55 | -1.69E-46 |
| MS.gene052133 | MS.gene50013 | 0.813594 | 2.36E-51 | -1.69E-46 |
| MS.gene052307 | MS.gene50013 | 0.851125 | 1.09E-60 | -1.69E-46 |
| MS.gene052335 | MS.gene50013 | 0.830456 | 2.91E-55 | -1.69E-46 |
| MS.gene052516 | MS.gene50013 | 0.802889 | 4.53E-49 | -1.69E-46 |
| MS.gene052533 | MS.gene50013 | 0.827636 | 1.40E-54 | -1.69E-46 |
| MS.gene052609 | MS.gene50013 | 0.834504 | 2.89E-56 | -1.69E-46 |
| MS.gene052793 | MS.gene50013 | 0.806838 | 6.77E-50 | -1.69E-46 |
| MS.gene052932 | MS.gene50013 | 0.80654 | 7.83E-50 | -1.69E-46 |
| MS.gene052947 | MS.gene50013 | 0.845854 | 3.13E-59 | -1.69E-46 |
| MS.gene053045 | MS.gene50013 | 0.804356 | 2.25E-49 | -1.69E-46 |
| MS.gene053122 | MS.gene50013 | 0.814158 | 1.78E-51 | -1.69E-46 |
| MS.gene053143 | MS.gene50013 | 0.837465 | 5.12E-57 | -1.69E-46 |
| MS.gene053144 | MS.gene50013 | 0.819161 | 1.34E-52 | -1.69E-46 |
| MS.gene053226 | MS.gene50013 | 0.815462 | 9.13E-52 | -1.69E-46 |
| MS.gene053581 | MS.gene50013 | 0.840725 | 7.31E-58 | -1.69E-46 |
| MS.gene053599 | MS.gene50013 | 0.81035 | 1.20E-50 | -1.69E-46 |
| MS.gene05364 | MS.gene50013 | 0.830224 | 3.31E-55 | -1.69E-46 |
| MS.gene053952 | MS.gene50013 | 0.814126 | 1.81E-51 | -1.69E-46 |
| MS.gene054250 | MS.gene50013 | 0.807508 | 4.88E-50 | -1.69E-46 |
| MS.gene054403 | MS.gene50013 | 0.858815 | 6.36E-63 | -1.69E-46 |
| MS.gene05469 | MS.gene50013 | 0.809011 | 2.34E-50 | -1.69E-46 |
| MS.gene054709 | MS.gene50013 | 0.817597 | 3.04E-52 | -1.69E-46 |
| MS.gene055313 | MS.gene50013 | 0.822246 | 2.62E-53 | -1.69E-46 |
| MS.gene055314 | MS.gene50013 | 0.800399 | 1.47E-48 | -1.69E-46 |
| MS.gene055374 | MS.gene50013 | 0.808381 | 3.18E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene50013 | 0.830886 | 2.28E-55 | -1.69E-46 |
| MS.gene055555 | MS.gene50013 | 0.819905 | 9.08E-53 | -1.69E-46 |
| MS.gene056005 | MS.gene50013 | 0.833231 | 6.00E-56 | -1.69E-46 |
| MS.gene056043 | MS.gene50013 | -0.8014 | 9.17E-49 | -1.69E-46 |
| MS.gene056075 | MS.gene50013 | 0.838851 | 2.25E-57 | -1.69E-46 |
| MS.gene056308 | MS.gene50013 | 0.806566 | 7.73E-50 | -1.69E-46 |
| MS.gene056578 | MS.gene50013 | 0.808152 | 3.56E-50 | -1.69E-46 |
| MS.gene056699 | MS.gene50013 | 0.811128 | 8.17E-51 | -1.69E-46 |
| MS.gene056986 | MS.gene50013 | 0.822418 | 2.39E-53 | -1.69E-46 |
| MS.gene057102 | MS.gene50013 | 0.865568 | 5.37E-65 | -1.69E-46 |
| MS.gene057705 | MS.gene50013 | 0.835372 | 1.74E-56 | -1.69E-46 |
| MS.gene058149 | MS.gene50013 | 0.815752 | 7.87E-52 | -1.69E-46 |
| MS.gene058492 | MS.gene50013 | 0.807842 | 4.15E-50 | -1.69E-46 |
| MS.gene058668 | MS.gene50013 | 0.802711 | 4.93E-49 | -1.69E-46 |
| MS.gene058852 | MS.gene50013 | 0.848709 | 5.16E-60 | -1.69E-46 |
| MS.gene059146 | MS.gene50013 | 0.801322 | 9.51E-49 | -1.69E-46 |
| MS.gene059171 | MS.gene50013 | 0.83198 | 1.23E-55 | -1.69E-46 |
| MS.gene059227 | MS.gene50013 | 0.87348 | 1.42E-67 | -1.69E-46 |
| MS.gene05985 | MS.gene50013 | -0.822706 | 2.05E-53 | -1.69E-46 |
| MS.gene059965 | MS.gene50013 | 0.822715 | 2.04E-53 | -1.69E-46 |
| MS.gene06001 | MS.gene50013 | 0.82004 | 8.46E-53 | -1.69E-46 |
| MS.gene060365 | MS.gene50013 | 0.805707 | 1.17E-49 | -1.69E-46 |
| MS.gene061100 | MS.gene50013 | 0.828714 | 7.71E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene50013 | MS.gene072961 | PPI |
| MS.gene045555 | MS.gene50013 | PPI |
| MS.gene50013 | MS.gene50004 | PPI |
| MS.gene50013 | MS.gene031675 | PPI |
| MS.gene50013 | MS.gene002499 | PPI |
| MS.gene50013 | MS.gene038363 | PPI |
| MS.gene50013 | MS.gene01472 | PPI |
| MS.gene50013 | MS.gene75767 | PPI |
| MS.gene50013 | MS.gene047354 | PPI |
| MS.gene50013 | MS.gene037465 | PPI |
| MS.gene017129 | MS.gene50013 | PPI |
| MS.gene50013 | MS.gene07262 | PPI |
| MS.gene50013 | MS.gene014782 | PPI |
| MS.gene006630 | MS.gene50013 | PPI |
| MS.gene50013 | MS.gene030057 | PPI |
| MS.gene50013 | MS.gene062351 | PPI |
| MS.gene50013 | MS.gene20834 | PPI |
| MS.gene50013 | MS.gene01038 | PPI |
| MS.gene20783 | MS.gene50013 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50013.t1 | MTR_4g015840 | 99.413 | 341 | 2 | 0 | 1 | 341 | 1 | 341 | 0.0 | 692 |
| MS.gene50013.t1 | MTR_4g015840 | 99.621 | 264 | 1 | 0 | 78 | 341 | 1 | 264 | 0.0 | 533 |
| MS.gene50013.t1 | MTR_2g014470 | 70.640 | 344 | 91 | 4 | 1 | 339 | 1 | 339 | 1.28e-170 | 478 |
| MS.gene50013.t1 | MTR_4g078850 | 67.236 | 351 | 100 | 4 | 1 | 341 | 1 | 346 | 1.00e-169 | 476 |
| MS.gene50013.t1 | MTR_2g090705 | 63.143 | 350 | 103 | 5 | 1 | 339 | 1 | 335 | 1.89e-153 | 434 |
| MS.gene50013.t1 | MTR_2g014480 | 60.290 | 345 | 118 | 6 | 1 | 332 | 1 | 339 | 1.13e-135 | 389 |
| MS.gene50013.t1 | MTR_3g108020 | 58.235 | 340 | 125 | 5 | 1 | 338 | 1 | 325 | 1.27e-128 | 371 |
| MS.gene50013.t1 | MTR_5g037880 | 56.571 | 175 | 76 | 0 | 165 | 339 | 101 | 275 | 6.80e-68 | 214 |
| MS.gene50013.t1 | MTR_5g037880 | 54.667 | 75 | 27 | 1 | 4 | 71 | 5 | 79 | 1.97e-19 | 87.0 |
| MS.gene50013.t1 | MTR_7g109340 | 37.318 | 343 | 180 | 8 | 5 | 338 | 27 | 343 | 1.04e-54 | 182 |
| MS.gene50013.t1 | MTR_3g437840 | 47.205 | 161 | 85 | 0 | 179 | 339 | 2 | 162 | 7.28e-51 | 167 |
| MS.gene50013.t1 | MTR_3g437360 | 49.123 | 171 | 81 | 3 | 148 | 316 | 165 | 331 | 1.36e-47 | 164 |
| MS.gene50013.t1 | MTR_3g437360 | 49.367 | 79 | 40 | 0 | 3 | 81 | 4 | 82 | 8.63e-19 | 86.3 |
| MS.gene50013.t1 | MTR_2g006890 | 44.624 | 186 | 102 | 1 | 154 | 338 | 190 | 375 | 2.96e-46 | 161 |
| MS.gene50013.t1 | MTR_3g088140 | 43.407 | 182 | 102 | 1 | 161 | 341 | 175 | 356 | 3.28e-45 | 158 |
| MS.gene50013.t1 | MTR_8g006430 | 29.208 | 404 | 160 | 12 | 5 | 338 | 15 | 362 | 3.10e-36 | 135 |
| MS.gene50013.t1 | MTR_3g437850 | 36.816 | 201 | 85 | 4 | 3 | 195 | 1 | 167 | 5.11e-36 | 128 |
| MS.gene50013.t1 | MTR_3g087030 | 28.689 | 366 | 209 | 13 | 3 | 337 | 81 | 425 | 1.23e-31 | 123 |
| MS.gene50013.t1 | MTR_5g065160 | 29.480 | 346 | 216 | 12 | 4 | 332 | 83 | 417 | 1.01e-26 | 110 |
| MS.gene50013.t1 | MTR_5g065160 | 29.480 | 346 | 216 | 12 | 4 | 332 | 82 | 416 | 1.05e-26 | 110 |
| MS.gene50013.t1 | MTR_5g065160 | 29.480 | 346 | 216 | 12 | 4 | 332 | 83 | 417 | 1.64e-26 | 109 |
| MS.gene50013.t1 | MTR_5g065160 | 29.480 | 346 | 216 | 12 | 4 | 332 | 76 | 410 | 1.69e-26 | 109 |
| MS.gene50013.t1 | MTR_2g087660 | 36.232 | 138 | 86 | 1 | 203 | 338 | 221 | 358 | 1.66e-24 | 103 |
| MS.gene50013.t1 | MTR_2g087660 | 56.338 | 71 | 26 | 1 | 5 | 75 | 14 | 79 | 3.15e-12 | 67.4 |
| MS.gene50013.t1 | MTR_4g050420 | 35.507 | 138 | 87 | 1 | 203 | 338 | 219 | 356 | 1.36e-23 | 100 |
| MS.gene50013.t1 | MTR_4g050420 | 52.113 | 71 | 29 | 1 | 5 | 75 | 14 | 79 | 9.64e-11 | 62.8 |
| MS.gene50013.t1 | MTR_3g027580 | 30.028 | 353 | 211 | 11 | 4 | 337 | 89 | 424 | 2.83e-23 | 100 |
| MS.gene50013.t1 | MTR_4g023470 | 26.149 | 348 | 220 | 11 | 5 | 331 | 87 | 418 | 7.68e-20 | 90.5 |
| MS.gene50013.t1 | MTR_7g101070 | 55.385 | 65 | 29 | 0 | 4 | 68 | 358 | 422 | 3.82e-19 | 88.6 |
| MS.gene50013.t1 | MTR_2g104030 | 41.803 | 122 | 51 | 4 | 4 | 125 | 70 | 171 | 8.22e-19 | 87.4 |
| MS.gene50013.t1 | MTR_7g112360 | 54.545 | 66 | 27 | 1 | 5 | 67 | 17 | 82 | 6.19e-17 | 77.4 |
| MS.gene50013.t1 | MTR_6g471050 | 25.501 | 349 | 199 | 11 | 30 | 339 | 7 | 333 | 7.74e-17 | 81.6 |
| MS.gene50013.t1 | MTR_7g112360 | 54.545 | 66 | 27 | 1 | 5 | 67 | 17 | 82 | 8.62e-17 | 75.9 |
| MS.gene50013.t1 | MTR_5g012530 | 47.297 | 74 | 37 | 1 | 4 | 75 | 12 | 85 | 1.31e-15 | 78.2 |
| MS.gene50013.t1 | MTR_1g110310 | 49.296 | 71 | 35 | 1 | 4 | 74 | 16 | 85 | 2.97e-15 | 76.6 |
| MS.gene50013.t1 | MTR_5g065860 | 51.562 | 64 | 30 | 1 | 4 | 67 | 48 | 110 | 4.85e-15 | 72.0 |
| MS.gene50013.t1 | MTR_7g069480 | 50.000 | 70 | 33 | 1 | 3 | 72 | 26 | 93 | 7.71e-15 | 75.9 |
| MS.gene50013.t1 | MTR_8g022310 | 46.377 | 69 | 32 | 1 | 4 | 67 | 10 | 78 | 1.79e-14 | 72.0 |
| MS.gene50013.t1 | MTR_5g035770 | 49.315 | 73 | 36 | 1 | 4 | 76 | 25 | 96 | 3.00e-14 | 73.6 |
| MS.gene50013.t1 | MTR_8g022310 | 46.377 | 69 | 32 | 1 | 4 | 67 | 10 | 78 | 3.03e-14 | 70.9 |
| MS.gene50013.t1 | MTR_8g022310 | 46.377 | 69 | 32 | 1 | 4 | 67 | 10 | 78 | 3.67e-14 | 71.6 |
| MS.gene50013.t1 | MTR_8g022310 | 46.377 | 69 | 32 | 1 | 4 | 67 | 10 | 78 | 3.87e-14 | 70.9 |
| MS.gene50013.t1 | MTR_2g087660 | 37.209 | 86 | 54 | 0 | 201 | 286 | 219 | 304 | 7.49e-14 | 71.6 |
| MS.gene50013.t1 | MTR_2g087660 | 56.338 | 71 | 26 | 1 | 5 | 75 | 14 | 79 | 1.91e-12 | 67.8 |
| MS.gene50013.t1 | MTR_4g085070 | 54.717 | 53 | 21 | 1 | 18 | 67 | 26 | 78 | 1.10e-13 | 68.2 |
| MS.gene50013.t1 | MTR_6g027110 | 41.333 | 75 | 40 | 1 | 3 | 73 | 1 | 75 | 1.20e-13 | 67.8 |
| MS.gene50013.t1 | MTR_3g100330 | 52.239 | 67 | 29 | 2 | 3 | 68 | 68 | 132 | 2.06e-13 | 69.3 |
| MS.gene50013.t1 | MTR_1g029460 | 40.000 | 95 | 47 | 3 | 3 | 88 | 5 | 98 | 3.21e-13 | 70.5 |
| MS.gene50013.t1 | MTR_6g027030 | 42.667 | 75 | 39 | 1 | 3 | 73 | 1 | 75 | 3.87e-13 | 68.2 |
| MS.gene50013.t1 | MTR_1g087580 | 41.964 | 112 | 58 | 4 | 234 | 340 | 76 | 185 | 7.71e-13 | 67.0 |
| MS.gene50013.t1 | MTR_6g026940 | 43.478 | 69 | 35 | 1 | 3 | 67 | 1 | 69 | 1.03e-12 | 66.2 |
| MS.gene50013.t1 | MTR_1g052110 | 46.154 | 65 | 34 | 1 | 6 | 70 | 40 | 103 | 3.22e-12 | 66.6 |
| MS.gene50013.t1 | MTR_7g092380 | 31.707 | 123 | 77 | 3 | 6 | 122 | 24 | 145 | 7.39e-12 | 65.5 |
| MS.gene50013.t1 | MTR_5g004570 | 45.070 | 71 | 38 | 1 | 4 | 74 | 6 | 75 | 1.79e-11 | 63.9 |
| MS.gene50013.t1 | MTR_2g020420 | 53.846 | 65 | 28 | 1 | 3 | 67 | 68 | 130 | 8.31e-11 | 63.9 |
| MS.gene50013.t1 | MTR_2g020420 | 53.846 | 65 | 28 | 1 | 3 | 67 | 68 | 130 | 8.42e-11 | 63.5 |
| MS.gene50013.t1 | MTR_8g037810 | 42.697 | 89 | 48 | 2 | 5 | 91 | 7 | 94 | 9.65e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50013.t1 | AT3G08910 | 77.843 | 343 | 54 | 5 | 1 | 341 | 1 | 323 | 0.0 | 519 |
| MS.gene50013.t1 | AT5G01390 | 75.294 | 340 | 77 | 4 | 1 | 339 | 1 | 334 | 2.69e-180 | 502 |
| MS.gene50013.t1 | AT2G20560 | 71.594 | 345 | 82 | 4 | 1 | 338 | 1 | 336 | 3.42e-174 | 487 |
| MS.gene50013.t1 | AT4G28480 | 67.705 | 353 | 93 | 4 | 1 | 338 | 1 | 347 | 3.44e-163 | 459 |
| MS.gene50013.t1 | AT4G28480 | 61.808 | 343 | 72 | 5 | 1 | 338 | 1 | 289 | 7.50e-137 | 390 |
| MS.gene50013.t1 | AT5G25530 | 58.166 | 349 | 125 | 6 | 1 | 339 | 1 | 338 | 4.09e-136 | 390 |
| MS.gene50013.t1 | AT5G25530 | 56.863 | 357 | 125 | 7 | 1 | 339 | 1 | 346 | 3.00e-133 | 384 |
| MS.gene50013.t1 | AT5G01390 | 60.933 | 343 | 63 | 5 | 1 | 339 | 1 | 276 | 2.75e-132 | 378 |
| MS.gene50013.t1 | AT1G10350 | 55.429 | 350 | 146 | 3 | 1 | 341 | 1 | 349 | 3.30e-128 | 371 |
| MS.gene50013.t1 | AT3G47940 | 52.162 | 370 | 121 | 5 | 1 | 338 | 1 | 346 | 2.80e-125 | 363 |
| MS.gene50013.t1 | AT1G59725 | 54.131 | 351 | 131 | 4 | 1 | 341 | 1 | 331 | 2.02e-123 | 358 |
| MS.gene50013.t1 | AT5G01390 | 53.392 | 339 | 56 | 5 | 1 | 339 | 1 | 237 | 6.52e-106 | 310 |
| MS.gene50013.t1 | AT2G20550 | 55.634 | 284 | 78 | 6 | 100 | 338 | 3 | 283 | 2.17e-96 | 287 |
| MS.gene50013.t1 | AT2G20550 | 55.634 | 284 | 78 | 6 | 100 | 338 | 3 | 283 | 2.17e-96 | 287 |
| MS.gene50013.t1 | AT5G01390 | 70.918 | 196 | 50 | 4 | 1 | 195 | 1 | 190 | 2.02e-84 | 255 |
| MS.gene50013.t1 | AT1G44160 | 43.644 | 236 | 120 | 3 | 111 | 341 | 129 | 356 | 4.90e-53 | 179 |
| MS.gene50013.t1 | AT3G62600 | 37.037 | 351 | 180 | 11 | 2 | 339 | 24 | 346 | 1.37e-51 | 174 |
| MS.gene50013.t1 | AT1G11040 | 39.604 | 202 | 107 | 1 | 146 | 332 | 225 | 426 | 1.92e-44 | 158 |
| MS.gene50013.t1 | AT5G22060 | 30.653 | 398 | 159 | 10 | 5 | 338 | 15 | 359 | 1.84e-36 | 136 |
| MS.gene50013.t1 | AT2G22360 | 29.091 | 385 | 182 | 13 | 3 | 337 | 85 | 428 | 2.07e-35 | 134 |
| MS.gene50013.t1 | AT5G48030 | 28.532 | 361 | 203 | 14 | 4 | 331 | 94 | 432 | 5.80e-26 | 108 |
| MS.gene50013.t1 | AT3G44110 | 35.507 | 138 | 87 | 1 | 203 | 338 | 221 | 358 | 3.53e-23 | 99.8 |
| MS.gene50013.t1 | AT1G80030 | 43.307 | 127 | 46 | 5 | 4 | 130 | 75 | 175 | 8.11e-21 | 93.6 |
| MS.gene50013.t1 | AT1G80030 | 43.307 | 127 | 46 | 5 | 4 | 130 | 75 | 175 | 1.10e-20 | 93.2 |
| MS.gene50013.t1 | AT1G80030 | 43.307 | 127 | 46 | 5 | 4 | 130 | 75 | 175 | 1.10e-20 | 93.2 |
| MS.gene50013.t1 | AT1G80030 | 43.307 | 127 | 46 | 5 | 4 | 130 | 75 | 175 | 1.10e-20 | 93.2 |
| MS.gene50013.t1 | AT3G17830 | 56.000 | 75 | 31 | 1 | 2 | 76 | 61 | 133 | 2.03e-19 | 89.4 |
| MS.gene50013.t1 | AT4G39960 | 50.588 | 85 | 36 | 2 | 4 | 88 | 85 | 163 | 8.73e-19 | 87.4 |
| MS.gene50013.t1 | AT4G39960 | 32.353 | 136 | 88 | 3 | 204 | 337 | 301 | 434 | 2.19e-14 | 74.3 |
| MS.gene50013.t1 | AT4G39960 | 50.588 | 85 | 36 | 2 | 4 | 88 | 85 | 163 | 8.73e-19 | 87.4 |
| MS.gene50013.t1 | AT4G39960 | 32.353 | 136 | 88 | 3 | 204 | 337 | 301 | 434 | 2.19e-14 | 74.3 |
| MS.gene50013.t1 | AT3G44110 | 36.111 | 108 | 67 | 1 | 203 | 308 | 221 | 328 | 1.07e-16 | 80.5 |
| MS.gene50013.t1 | AT5G03160 | 52.308 | 65 | 31 | 0 | 4 | 68 | 370 | 434 | 2.38e-16 | 80.1 |
| MS.gene50013.t1 | AT1G68370 | 52.113 | 71 | 33 | 1 | 4 | 74 | 17 | 86 | 5.54e-16 | 79.0 |
| MS.gene50013.t1 | AT1G56300 | 51.515 | 66 | 29 | 1 | 5 | 67 | 14 | 79 | 9.70e-16 | 73.2 |
| MS.gene50013.t1 | AT1G56300 | 51.515 | 66 | 29 | 1 | 5 | 67 | 14 | 79 | 1.13e-15 | 73.9 |
| MS.gene50013.t1 | AT5G16650 | 51.562 | 64 | 30 | 1 | 4 | 67 | 11 | 73 | 2.00e-15 | 73.6 |
| MS.gene50013.t1 | AT5G16650 | 51.562 | 64 | 30 | 1 | 4 | 67 | 11 | 73 | 2.82e-15 | 72.0 |
| MS.gene50013.t1 | AT1G59980 | 47.826 | 69 | 35 | 1 | 6 | 74 | 25 | 92 | 8.22e-15 | 75.1 |
| MS.gene50013.t1 | AT1G59980 | 47.826 | 69 | 35 | 1 | 6 | 74 | 25 | 92 | 1.62e-14 | 74.3 |
| MS.gene50013.t1 | AT2G41000 | 46.377 | 69 | 33 | 1 | 3 | 67 | 2 | 70 | 2.94e-14 | 71.2 |
| MS.gene50013.t1 | AT3G08970 | 49.333 | 75 | 34 | 2 | 3 | 77 | 26 | 96 | 4.13e-14 | 73.6 |
| MS.gene50013.t1 | AT3G08970 | 49.333 | 75 | 34 | 2 | 3 | 77 | 26 | 96 | 4.13e-14 | 73.6 |
| MS.gene50013.t1 | AT2G35720 | 45.205 | 73 | 38 | 1 | 4 | 74 | 15 | 87 | 5.11e-14 | 73.2 |
| MS.gene50013.t1 | AT2G41000 | 46.377 | 69 | 33 | 1 | 3 | 67 | 2 | 70 | 6.69e-14 | 69.7 |
| MS.gene50013.t1 | AT2G21510 | 46.914 | 81 | 41 | 2 | 4 | 83 | 6 | 85 | 9.63e-14 | 71.6 |
| MS.gene50013.t1 | AT2G21510 | 46.914 | 81 | 41 | 2 | 4 | 83 | 6 | 85 | 9.63e-14 | 71.6 |
| MS.gene50013.t1 | AT2G21510 | 46.914 | 81 | 41 | 2 | 4 | 83 | 6 | 85 | 9.77e-14 | 71.6 |
| MS.gene50013.t1 | AT2G21510 | 46.914 | 81 | 41 | 2 | 4 | 83 | 6 | 85 | 9.77e-14 | 71.6 |
| MS.gene50013.t1 | AT2G21510 | 46.914 | 81 | 41 | 2 | 4 | 83 | 6 | 85 | 1.31e-13 | 71.2 |
| MS.gene50013.t1 | AT1G24120 | 44.595 | 74 | 40 | 1 | 4 | 77 | 20 | 92 | 1.99e-13 | 71.2 |
| MS.gene50013.t1 | AT2G33735 | 46.154 | 65 | 34 | 1 | 4 | 68 | 22 | 85 | 2.71e-13 | 66.2 |
| MS.gene50013.t1 | AT2G33735 | 46.154 | 65 | 34 | 1 | 4 | 68 | 22 | 85 | 2.71e-13 | 66.2 |
| MS.gene50013.t1 | AT5G06910 | 49.231 | 65 | 32 | 1 | 6 | 70 | 31 | 94 | 8.32e-13 | 68.2 |
| MS.gene50013.t1 | AT1G71000 | 43.939 | 66 | 34 | 1 | 5 | 67 | 9 | 74 | 7.69e-12 | 63.5 |
| MS.gene50013.t1 | AT4G39150 | 43.210 | 81 | 44 | 2 | 4 | 83 | 6 | 85 | 1.12e-11 | 65.5 |
| MS.gene50013.t1 | AT4G39150 | 43.210 | 81 | 44 | 2 | 4 | 83 | 6 | 85 | 1.12e-11 | 65.5 |
| MS.gene50013.t1 | AT4G39150 | 43.210 | 81 | 44 | 2 | 4 | 83 | 6 | 85 | 1.12e-11 | 65.5 |
| MS.gene50013.t1 | AT1G71000 | 43.939 | 66 | 34 | 1 | 5 | 67 | 9 | 74 | 1.69e-11 | 62.4 |
| MS.gene50013.t1 | AT4G19570 | 51.515 | 66 | 30 | 1 | 3 | 68 | 65 | 128 | 2.75e-11 | 65.1 |
| MS.gene50013.t1 | AT3G12170 | 46.154 | 65 | 34 | 1 | 6 | 70 | 13 | 76 | 3.28e-11 | 63.5 |
| MS.gene50013.t1 | AT1G21080 | 41.250 | 80 | 46 | 1 | 4 | 83 | 6 | 84 | 3.63e-11 | 64.3 |
| MS.gene50013.t1 | AT1G21080 | 40.741 | 81 | 47 | 1 | 3 | 83 | 5 | 84 | 3.95e-11 | 63.9 |
| MS.gene50013.t1 | AT5G05750 | 37.273 | 110 | 61 | 3 | 4 | 113 | 114 | 215 | 4.63e-11 | 63.2 |
| MS.gene50013.t1 | AT3G12170 | 46.154 | 65 | 34 | 1 | 6 | 70 | 49 | 112 | 5.69e-11 | 63.2 |
Find 95 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAGAGATTTGCTTGAATT+TGG | 0.168588 | 4.3:-82665498 | None:intergenic |
| TCAGCATCTTTCTTGTTATT+AGG | 0.176740 | 4.3:-82665473 | None:intergenic |
| CAGCATCTTTCTTGTTATTA+GGG | 0.208495 | 4.3:-82665472 | None:intergenic |
| TCCCATCGAGGGTAGCTATT+TGG | 0.216321 | 4.3:-82668528 | None:intergenic |
| TCCTAAGGAACCTTCCAAAA+AGG | 0.245405 | 4.3:+82668627 | MS.gene50013:CDS |
| GCTTTCCGAGGGGAATGTTT+AGG | 0.274668 | 4.3:+82666750 | MS.gene50013:CDS |
| CTTTCCGAGGGGAATGTTTA+GGG | 0.283758 | 4.3:+82666751 | MS.gene50013:CDS |
| CCCATCGAGGGTAGCTATTT+GGG | 0.309339 | 4.3:-82668527 | None:intergenic |
| TCATATGAAGAAGTAATTAA+AGG | 0.309573 | 4.3:+82668589 | MS.gene50013:CDS |
| TGCTCTGATGTAAGTCTTGA+TGG | 0.316745 | 4.3:-82668682 | None:intergenic |
| AGTTTGGAGGATTTGTATAA+AGG | 0.321209 | 4.3:+82666866 | MS.gene50013:CDS |
| TGGCGGTGGAATGGGTGATA+TGG | 0.323498 | 4.3:+82666706 | MS.gene50013:CDS |
| CTCTGTTCATTTCCCTTCTC+CGG | 0.330584 | 4.3:-82668376 | None:intergenic |
| AAACAAGGTCTGCAGGTATA+AGG | 0.341570 | 4.3:-82668402 | None:intergenic |
| TTGTTATTAGGGTTCTTATC+AGG | 0.349663 | 4.3:-82665461 | None:intergenic |
| GTTTGGAGGATTTGTATAAA+GGG | 0.350475 | 4.3:+82666867 | MS.gene50013:CDS |
| AGAATTTCCTCAACTGTAGT+AGG | 0.358832 | 4.3:-82668304 | None:intergenic |
| TTTCTCTTCCTTTAGGAATT+CGG | 0.359374 | 4.3:+82666781 | MS.gene50013:CDS |
| TTGGAAGGTTCCTTAGGAAT+TGG | 0.363891 | 4.3:-82668622 | None:intergenic |
| GGTGGTCATCCTGGTGCATC+TGG | 0.369509 | 4.3:+82666728 | MS.gene50013:CDS |
| GAGAACATTGCCTTGCAGTT+TGG | 0.378422 | 4.3:+82666850 | MS.gene50013:CDS |
| TTCGGGTTTCAAAGACCATT+TGG | 0.392906 | 4.3:+82666686 | MS.gene50013:CDS |
| TTAATTACTTCTTCATATGA+TGG | 0.396614 | 4.3:-82668586 | None:intergenic |
| AGACCATTTGGCGGTGGAAT+GGG | 0.427291 | 4.3:+82666698 | MS.gene50013:CDS |
| ATCGCAAACTTGCTATGAAA+TGG | 0.429662 | 4.3:+82665435 | MS.gene50013:CDS |
| GGTGATATGGGTGGTCATCC+TGG | 0.434210 | 4.3:+82666719 | MS.gene50013:CDS |
| GGCGGTGGAATGGGTGATAT+GGG | 0.438794 | 4.3:+82666707 | MS.gene50013:CDS |
| ATGGTGGACCGACAATGTTC+CGG | 0.441258 | 4.3:+82666624 | MS.gene50013:CDS |
| ATCAAGCCAGGTTGGAAGAA+AGG | 0.451023 | 4.3:+82668337 | MS.gene50013:CDS |
| AAGACCATTTGGCGGTGGAA+TGG | 0.454672 | 4.3:+82666697 | MS.gene50013:CDS |
| ATATGGTGAGGAGGGGTTGA+AGG | 0.458111 | 4.3:+82666556 | MS.gene50013:CDS |
| TCGGAAAATCCACCTGCACC+TGG | 0.462806 | 4.3:-82666593 | None:intergenic |
| TTTGTTCCTTTCTTCCAACC+TGG | 0.471768 | 4.3:-82668343 | None:intergenic |
| AATATGTCATCCGCACTTCT+CGG | 0.475047 | 4.3:-82666653 | None:intergenic |
| CCGCACTTCTCGGATTGAAC+CGG | 0.478831 | 4.3:-82666643 | None:intergenic |
| CTAACAATTGAGATCAAGCC+AGG | 0.485097 | 4.3:+82668325 | MS.gene50013:CDS |
| AACATTGCCTTGCAGTTTGG+AGG | 0.487226 | 4.3:+82666853 | MS.gene50013:CDS |
| GGATTGAACCGGAACATTGT+CGG | 0.505215 | 4.3:-82666632 | None:intergenic |
| AGAGCTGTGTATGATCAATA+TGG | 0.509203 | 4.3:+82666539 | MS.gene50013:CDS |
| CAAGGCAATGTTCTCTCTAT+CGG | 0.510097 | 4.3:-82666842 | None:intergenic |
| GCTGGAATCAGTAACATCTC+TGG | 0.511627 | 4.3:-82666912 | None:intergenic |
| CCTCGATGGGAGGAATCTTA+CGG | 0.515468 | 4.3:+82668540 | MS.gene50013:CDS |
| CCCAAATAGCTACCCTCGAT+GGG | 0.515770 | 4.3:+82668527 | MS.gene50013:CDS |
| GGACTAATGATGGTGTTGAC+GGG | 0.516562 | 4.3:-82668565 | None:intergenic |
| TCCCTCTTGAAGACAGTATG+AGG | 0.516733 | 4.3:-82668442 | None:intergenic |
| TGGTGCATCTGGCTTTCCGA+GGG | 0.518716 | 4.3:+82666739 | MS.gene50013:CDS |
| CGGAAAATCCACCTGCACCT+GGG | 0.520170 | 4.3:-82666592 | None:intergenic |
| TTTAGGAATTCGGCCGGTGA+AGG | 0.528483 | 4.3:+82666791 | MS.gene50013:CDS |
| CTGGTGCATCTGGCTTTCCG+AGG | 0.535834 | 4.3:+82666738 | MS.gene50013:CDS |
| GCCCAAATAGCTACCCTCGA+TGG | 0.538402 | 4.3:+82668526 | MS.gene50013:CDS |
| TTCATATGATGGACTAATGA+TGG | 0.538880 | 4.3:-82668575 | None:intergenic |
| TTGCATTTCGATCTATCTGA+AGG | 0.539158 | 4.3:-82665388 | None:intergenic |
| CTCGGAAAGCCAGATGCACC+AGG | 0.544371 | 4.3:-82666737 | None:intergenic |
| CAATTGAGATCAAGCCAGGT+TGG | 0.546154 | 4.3:+82668329 | MS.gene50013:CDS |
| TCACCCATTCCACCGCCAAA+TGG | 0.551823 | 4.3:-82666701 | None:intergenic |
| GGGTTTCAAAGACCATTTGG+CGG | 0.553824 | 4.3:+82666689 | MS.gene50013:CDS |
| TGAAGAAGTAATTAAAGGAG+AGG | 0.557340 | 4.3:+82668594 | MS.gene50013:CDS |
| AGAGGGTATGCCAATTCCTA+AGG | 0.558236 | 4.3:+82668612 | MS.gene50013:CDS |
| TGTCAATAATCGCTTGATGC+CGG | 0.560172 | 4.3:-82668710 | None:intergenic |
| AATTCCTAAAGGAAGAGAAA+AGG | 0.566815 | 4.3:-82666778 | None:intergenic |
| GGAAAATCCACCTGCACCTG+GGG | 0.568173 | 4.3:-82666591 | None:intergenic |
| TTTCAAAGACCATTTGGCGG+TGG | 0.571030 | 4.3:+82666692 | MS.gene50013:CDS |
| TTCACCGGCCGAATTCCTAA+AGG | 0.573122 | 4.3:-82666789 | None:intergenic |
| TATGGTGAGGAGGGGTTGAA+GGG | 0.576990 | 4.3:+82666557 | MS.gene50013:CDS |
| GAAGAAGTAATTAAAGGAGA+GGG | 0.582830 | 4.3:+82668595 | MS.gene50013:CDS |
| CACATTGGCAGATCCTTCAC+CGG | 0.582928 | 4.3:-82666804 | None:intergenic |
| TCTCTTGTAGAAGCTCTGAC+AGG | 0.585328 | 4.3:+82668496 | MS.gene50013:CDS |
| TGGACTAATGATGGTGTTGA+CGG | 0.590380 | 4.3:-82668566 | None:intergenic |
| TATGATCAATATGGTGAGGA+GGG | 0.591969 | 4.3:+82666548 | MS.gene50013:CDS |
| TACAAATCCTCCAAACTGCA+AGG | 0.594020 | 4.3:-82666860 | None:intergenic |
| CTTACATCAGAGCAGAAGAC+CGG | 0.597536 | 4.3:+82668691 | MS.gene50013:CDS |
| CGTAAGATTCCTCCCATCGA+GGG | 0.600569 | 4.3:-82668539 | None:intergenic |
| TCTTCCTTTAGGAATTCGGC+CGG | 0.603452 | 4.3:+82666785 | MS.gene50013:CDS |
| ATGGTGAGGAGGGGTTGAAG+GGG | 0.612762 | 4.3:+82666558 | MS.gene50013:CDS |
| GGTGGAATGGGTGATATGGG+TGG | 0.613503 | 4.3:+82666710 | MS.gene50013:CDS |
| AAGGAAGCCTACTACAGTTG+AGG | 0.616465 | 4.3:+82668297 | MS.gene50013:intron |
| CATACTGTCTTCAAGAGGGA+CGG | 0.632225 | 4.3:+82668445 | MS.gene50013:CDS |
| GCCTCATACTGTCTTCAAGA+GGG | 0.644262 | 4.3:+82668441 | MS.gene50013:CDS |
| AGAGATGTTACTGATTCCAG+CGG | 0.648475 | 4.3:+82666914 | MS.gene50013:CDS |
| TCTTTGAAACCCGAAGAACT+CGG | 0.650196 | 4.3:-82666678 | None:intergenic |
| GAGATGTTACTGATTCCAGC+GGG | 0.654951 | 4.3:+82666915 | MS.gene50013:CDS |
| TCATCCCTAAACATTCCCCT+CGG | 0.655585 | 4.3:-82666755 | None:intergenic |
| AGCCTCATACTGTCTTCAAG+AGG | 0.661585 | 4.3:+82668440 | MS.gene50013:CDS |
| CGGTCCACCATCACCACCGT+CGG | 0.662709 | 4.3:-82666612 | None:intergenic |
| GGTGCATCTGGCTTTCCGAG+GGG | 0.666004 | 4.3:+82666740 | MS.gene50013:CDS |
| AAATAGCTACCCTCGATGGG+AGG | 0.668540 | 4.3:+82668530 | MS.gene50013:CDS |
| CCGGTTCAATCCGAGAAGTG+CGG | 0.669023 | 4.3:+82666643 | MS.gene50013:CDS |
| AAGGATCTGCCAATGTGATG+AGG | 0.672645 | 4.3:+82666810 | MS.gene50013:CDS |
| CCGTAAGATTCCTCCCATCG+AGG | 0.673715 | 4.3:-82668540 | None:intergenic |
| GTATGATCAATATGGTGAGG+AGG | 0.684615 | 4.3:+82666547 | MS.gene50013:CDS |
| GACTAATGATGGTGTTGACG+GGG | 0.692431 | 4.3:-82668564 | None:intergenic |
| GAAAATCCACCTGCACCTGG+GGG | 0.693417 | 4.3:-82666590 | None:intergenic |
| TGTGTATGATCAATATGGTG+AGG | 0.703352 | 4.3:+82666544 | MS.gene50013:CDS |
| GAGAAGGGAAATGAACAGAG+AGG | 0.703900 | 4.3:+82668379 | MS.gene50013:CDS |
| ATGATCAATATGGTGAGGAG+GGG | 0.712167 | 4.3:+82666549 | MS.gene50013:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAATTTTGATAATTTTAATT+GGG | + | chr4.3:82665561-82665580 | MS.gene50013:intron | 10.0% |
| !!! | TCAATTTTGATAATTTTAAT+TGG | + | chr4.3:82665560-82665579 | MS.gene50013:intron | 10.0% |
| !! | AAAGAATAATTTCATGAAAT+GGG | - | chr4.3:82667778-82667797 | None:intergenic | 15.0% |
| !! | ATAAACAGCTTAATTATATT+AGG | + | chr4.3:82667137-82667156 | MS.gene50013:intron | 15.0% |
| !!! | TGTGTTTAATTTTATGATTT+TGG | + | chr4.3:82666104-82666123 | MS.gene50013:intron | 15.0% |
| !!! | TTGTAAAGTTTTGATTTTTT+GGG | + | chr4.3:82665597-82665616 | MS.gene50013:intron | 15.0% |
| !!! | TTTGTAAAGTTTTGATTTTT+TGG | + | chr4.3:82665596-82665615 | MS.gene50013:intron | 15.0% |
| !!! | TTTTATGATTTTGGATAATT+TGG | + | chr4.3:82666113-82666132 | MS.gene50013:intron | 15.0% |
| !! | AAATAATCAAATTTCCGTTA+AGG | + | chr4.3:82667105-82667124 | MS.gene50013:intron | 20.0% |
| !! | GAAAGAATAATTTCATGAAA+TGG | - | chr4.3:82667779-82667798 | None:intergenic | 20.0% |
| !! | TCATATGAAGAAGTAATTAA+AGG | + | chr4.3:82668589-82668608 | MS.gene50013:CDS | 20.0% |
| !! | TGATACTTATAGTTCTTAAA+TGG | + | chr4.3:82667443-82667462 | MS.gene50013:intron | 20.0% |
| !! | TTAATTACTTCTTCATATGA+TGG | - | chr4.3:82668589-82668608 | None:intergenic | 20.0% |
| !!! | ATTGTTGATTTTGGATAATT+TGG | + | chr4.3:82665670-82665689 | MS.gene50013:intron | 20.0% |
| !!! | ATTTTATGAGTAAATGACTT+TGG | - | chr4.3:82667954-82667973 | None:intergenic | 20.0% |
| !!! | TGTAAAGTTTTGATTTTTTG+GGG | + | chr4.3:82665598-82665617 | MS.gene50013:intron | 20.0% |
| !!! | TGTGTTTTTATTGTTGATTT+TGG | + | chr4.3:82665661-82665680 | MS.gene50013:intron | 20.0% |
| !!! | TTGGATAATTTGGAAATTTT+GGG | + | chr4.3:82665680-82665699 | MS.gene50013:intron | 20.0% |
| !!! | TTGTTATTTTCTTGTGATTT+AGG | + | chr4.3:82666309-82666328 | MS.gene50013:intron | 20.0% |
| !!! | TTTGGATAATTTGGAAATTT+TGG | + | chr4.3:82665679-82665698 | MS.gene50013:intron | 20.0% |
| !!! | TTTTTGTTTTGATTGTGATT+AGG | + | chr4.3:82666350-82666369 | MS.gene50013:intron | 20.0% |
| ! | AATAAGCTAAAAACAGCTTA+TGG | + | chr4.3:82667257-82667276 | MS.gene50013:intron | 25.0% |
| ! | ATAAACATGATGAAGAATGT+TGG | - | chr4.3:82667556-82667575 | None:intergenic | 25.0% |
| ! | GAATGAAATAGCATATAGAA+AGG | - | chr4.3:82667481-82667500 | None:intergenic | 25.0% |
| ! | TGCAATAAGACATGTTTAAA+TGG | + | chr4.3:82667668-82667687 | MS.gene50013:intron | 25.0% |
| ! | TTAGGATTACTTGGAAATTT+CGG | + | chr4.3:82666195-82666214 | MS.gene50013:intron | 25.0% |
| !! | CAAAATAATTCTTCTTTTGC+TGG | + | chr4.3:82667500-82667519 | MS.gene50013:intron | 25.0% |
| !! | TCTTGTGATTTAGAATCATT+TGG | + | chr4.3:82666457-82666476 | MS.gene50013:intron | 25.0% |
| !! | TGGATAATTTGGAAATTTTG+GGG | + | chr4.3:82665681-82665700 | MS.gene50013:intron | 25.0% |
| !! | TGTATGTTTTCTTATTCTGA+AGG | + | chr4.3:82668278-82668297 | MS.gene50013:intron | 25.0% |
| !! | TTAGAATCATTTGGAATTGT+TGG | + | chr4.3:82666466-82666485 | MS.gene50013:intron | 25.0% |
| !! | TTGTGTTTTTCTTGTGATTT+AGG | + | chr4.3:82665965-82665984 | MS.gene50013:intron | 25.0% |
| !! | TTGTGTTTTTCTTGTGATTT+TGG | + | chr4.3:82665965-82665984 | MS.gene50013:intron | 25.0% |
| !! | TTTGGATAATTTGGAATTGT+GGG | + | chr4.3:82666122-82666141 | MS.gene50013:intron | 25.0% |
| !! | TTTTGTGATTTTGGATCATT+TGG | + | chr4.3:82666042-82666061 | MS.gene50013:intron | 25.0% |
| !!! | AGGTTTACAATTTTAGCTTA+TGG | + | chr4.3:82666010-82666029 | MS.gene50013:intron | 25.0% |
| !!! | ATTTGGAATTGTGAAGTTTT+AGG | + | chr4.3:82665910-82665929 | MS.gene50013:intron | 25.0% |
| !!! | GATCATTTGTTTGATTTTTG+GGG | + | chr4.3:82665757-82665776 | MS.gene50013:intron | 25.0% |
| !!! | GGATCATTTGTTTGATTTTT+GGG | + | chr4.3:82665756-82665775 | MS.gene50013:intron | 25.0% |
| !!! | GGTGTTTAATTTTGTGTTTT+TGG | + | chr4.3:82665723-82665742 | MS.gene50013:intron | 25.0% |
| !!! | GGTTTACAATTTTAGCTTAT+GGG | + | chr4.3:82666011-82666030 | MS.gene50013:intron | 25.0% |
| !!! | GTTGTTTTCATAAGCTATAT+TGG | + | chr4.3:82667222-82667241 | MS.gene50013:intron | 25.0% |
| !!! | GTTTACAATTTTAGCTTATG+GGG | + | chr4.3:82666012-82666031 | MS.gene50013:intron | 25.0% |
| !!! | GTTTTTTTCGTTGTTGATTT+TGG | + | chr4.3:82665818-82665837 | MS.gene50013:intron | 25.0% |
| !!! | TAGAAAGTGTTGTCATATAA+CGG | - | chr4.3:82668114-82668133 | None:intergenic | 25.0% |
| !!! | TCTGGAAATCTTCATTTTTT+TGG | - | chr4.3:82666897-82666916 | None:intergenic | 25.0% |
| !!! | TGAGATGTTTTTGAAATGTT+GGG | + | chr4.3:82666416-82666435 | MS.gene50013:intron | 25.0% |
| !!! | TGGATCATTTGTTTGATTTT+TGG | + | chr4.3:82665755-82665774 | MS.gene50013:intron | 25.0% |
| !!! | TGTATTTTGTTATGTGTTGT+TGG | + | chr4.3:82667037-82667056 | MS.gene50013:intron | 25.0% |
| !!! | TGTGTTTTTCTTGTTGATTT+TGG | + | chr4.3:82665735-82665754 | MS.gene50013:intron | 25.0% |
| !!! | TTTGATTTTTTGGGGTTTTT+GGG | + | chr4.3:82665606-82665625 | MS.gene50013:intron | 25.0% |
| !!! | TTTGGAATTGTGAAGTTTTA+GGG | + | chr4.3:82665911-82665930 | MS.gene50013:intron | 25.0% |
| !!! | TTTTGATTTTTTGGGGTTTT+TGG | + | chr4.3:82665605-82665624 | MS.gene50013:intron | 25.0% |
| !!! | TTTTGGATAATTTGGAATTG+TGG | + | chr4.3:82666121-82666140 | MS.gene50013:intron | 25.0% |
| AATTCCTAAAGGAAGAGAAA+AGG | - | chr4.3:82666781-82666800 | None:intergenic | 30.0% | |
| AGTTTGGAGGATTTGTATAA+AGG | + | chr4.3:82666866-82666885 | MS.gene50013:CDS | 30.0% | |
| ATAATAAAAACAAGGTCTGC+AGG | - | chr4.3:82668412-82668431 | None:intergenic | 30.0% | |
| CAATGCAACTAGGTTAATAT+AGG | - | chr4.3:82666966-82666985 | None:intergenic | 30.0% | |
| CTATATTAACCTAGTTGCAT+TGG | + | chr4.3:82666964-82666983 | MS.gene50013:intron | 30.0% | |
| GAAGAAGTAATTAAAGGAGA+GGG | + | chr4.3:82668595-82668614 | MS.gene50013:CDS | 30.0% | |
| GTGATGTGATGTAACTATTA+AGG | + | chr4.3:82667621-82667640 | MS.gene50013:intron | 30.0% | |
| GTTTGGAGGATTTGTATAAA+GGG | + | chr4.3:82666867-82666886 | MS.gene50013:CDS | 30.0% | |
| TAGGATTACTTGGAAATTTC+GGG | + | chr4.3:82666196-82666215 | MS.gene50013:intron | 30.0% | |
| TATTAGAGCTGTGAATTGAA+TGG | + | chr4.3:82668239-82668258 | MS.gene50013:intron | 30.0% | |
| TCAAATAAGCCAATCTAAAC+AGG | + | chr4.3:82667348-82667367 | MS.gene50013:intron | 30.0% | |
| TCTCGTCGATAATAAAAACA+AGG | - | chr4.3:82668420-82668439 | None:intergenic | 30.0% | |
| TGAAGAAGTAATTAAAGGAG+AGG | + | chr4.3:82668594-82668613 | MS.gene50013:CDS | 30.0% | |
| TTATTATGGCCTGTTTAGAT+TGG | - | chr4.3:82667360-82667379 | None:intergenic | 30.0% | |
| TTGTCTAAAAAACTTGAGTC+TGG | - | chr4.3:82667722-82667741 | None:intergenic | 30.0% | |
| ! | AGGAACAAAGATAACTTTTC+CGG | + | chr4.3:82668357-82668376 | MS.gene50013:CDS | 30.0% |
| ! | AGGGTTACAATTTGGAATTA+AGG | + | chr4.3:82666079-82666098 | MS.gene50013:intron | 30.0% |
| ! | AGTGATTTCGATTTGTGAAT+AGG | + | chr4.3:82666496-82666515 | MS.gene50013:intron | 30.0% |
| ! | ATTTGGAATTGTGAAGTTTC+AGG | + | chr4.3:82666059-82666078 | MS.gene50013:intron | 30.0% |
| ! | GGATAATTTGGAAATTTTGG+GGG | + | chr4.3:82665682-82665701 | MS.gene50013:intron | 30.0% |
| ! | GGGTTACAATTTGAAATGTT+GGG | + | chr4.3:82666277-82666296 | MS.gene50013:intron | 30.0% |
| ! | GGTTACAATTTGAAATGTTG+GGG | + | chr4.3:82666278-82666297 | MS.gene50013:intron | 30.0% |
| ! | GGTTACAATTTGGAATTATG+AGG | + | chr4.3:82666218-82666237 | MS.gene50013:intron | 30.0% |
| ! | GTTACAATTTGAAATGTTGG+GGG | + | chr4.3:82666279-82666298 | MS.gene50013:intron | 30.0% |
| ! | GTTGCATAATTTGGAATGTT+GGG | + | chr4.3:82665779-82665798 | MS.gene50013:intron | 30.0% |
| ! | TCTTGTGATTTAGGATCATT+TGG | + | chr4.3:82666318-82666337 | MS.gene50013:intron | 30.0% |
| ! | TCTTGTGATTTAGGATTACT+TGG | + | chr4.3:82666186-82666205 | MS.gene50013:intron | 30.0% |
| ! | TGGGTTACAATTTGAAATGT+TGG | + | chr4.3:82666276-82666295 | MS.gene50013:intron | 30.0% |
| ! | TTCAGAGATTTGCTTGAATT+TGG | - | chr4.3:82665501-82665520 | None:intergenic | 30.0% |
| ! | TTCTTGTGATTTTGGACATT+TGG | + | chr4.3:82665973-82665992 | MS.gene50013:intron | 30.0% |
| ! | TTGCATAATTTGGAATGTTG+GGG | + | chr4.3:82665780-82665799 | MS.gene50013:intron | 30.0% |
| ! | TTGGATCATTTGGACATTTT+GGG | + | chr4.3:82665837-82665856 | MS.gene50013:intron | 30.0% |
| ! | TTGTTATTAGGGTTCTTATC+AGG | - | chr4.3:82665464-82665483 | None:intergenic | 30.0% |
| ! | TTTCTCTTCCTTTAGGAATT+CGG | + | chr4.3:82666781-82666800 | MS.gene50013:CDS | 30.0% |
| ! | TTTGGAATTGTGAAGTTTCA+GGG | + | chr4.3:82666060-82666079 | MS.gene50013:intron | 30.0% |
| ! | TTTGGATCAGTTGGATTTTT+GGG | + | chr4.3:82666257-82666276 | MS.gene50013:intron | 30.0% |
| ! | TTTGGATCATTTGGACATTT+TGG | + | chr4.3:82665836-82665855 | MS.gene50013:intron | 30.0% |
| ! | TTTTGGATCAGTTGGATTTT+TGG | + | chr4.3:82666256-82666275 | MS.gene50013:intron | 30.0% |
| !! | CAAAATCTGCCACTTTATTA+TGG | - | chr4.3:82667374-82667393 | None:intergenic | 30.0% |
| !! | CAGCATCTTTCTTGTTATTA+GGG | - | chr4.3:82665475-82665494 | None:intergenic | 30.0% |
| !! | GGTGTTTGATTTTGTGATTT+TGG | + | chr4.3:82666033-82666052 | MS.gene50013:intron | 30.0% |
| !! | GTGTTTGATTTTGGATCATT+TGG | + | chr4.3:82665893-82665912 | MS.gene50013:intron | 30.0% |
| !! | TCAGCATCTTTCTTGTTATT+AGG | - | chr4.3:82665476-82665495 | None:intergenic | 30.0% |
| !! | TTCATATGATGGACTAATGA+TGG | - | chr4.3:82668578-82668597 | None:intergenic | 30.0% |
| !!! | ATTTGGAGTTTTGAGGTTTT+AGG | + | chr4.3:82665990-82666009 | MS.gene50013:intron | 30.0% |
| !!! | ATTTTTGGGGTTGCATAATT+TGG | + | chr4.3:82665770-82665789 | MS.gene50013:intron | 30.0% |
| !!! | GAAGTTTTAGGGTTACAATT+TGG | + | chr4.3:82665922-82665941 | MS.gene50013:intron | 30.0% |
| !!! | GAGATGTTTTTGAAATGTTG+GGG | + | chr4.3:82666417-82666436 | MS.gene50013:intron | 30.0% |
| !!! | GGAAATCTTCATTTTTTTGG+TGG | - | chr4.3:82666894-82666913 | None:intergenic | 30.0% |
| !!! | GTGAGATGTTTTTGAAATGT+TGG | + | chr4.3:82666415-82666434 | MS.gene50013:intron | 30.0% |
| !!! | GTTGTTGATTTTGGATCATT+TGG | + | chr4.3:82665827-82665846 | MS.gene50013:intron | 30.0% |
| !!! | TTGATTTTTTGGGGTTTTTG+GGG | + | chr4.3:82665607-82665626 | MS.gene50013:intron | 30.0% |
| !!! | TTTTGTGTTTTTGGATCAGT+TGG | + | chr4.3:82666248-82666267 | MS.gene50013:intron | 30.0% |
| AACCAATCCAAATTGTAACC+CGG | - | chr4.3:82666153-82666172 | None:intergenic | 35.0% | |
| AGAATTTCCTCAACTGTAGT+AGG | - | chr4.3:82668307-82668326 | None:intergenic | 35.0% | |
| AGAGCTGTGTATGATCAATA+TGG | + | chr4.3:82666539-82666558 | MS.gene50013:CDS | 35.0% | |
| AGGATTACTTGGAAATTTCG+GGG | + | chr4.3:82666197-82666216 | MS.gene50013:intron | 35.0% | |
| ATTAAGCTGTTTATCCGAAC+AGG | - | chr4.3:82667131-82667150 | None:intergenic | 35.0% | |
| CCAATAAAACCAATGCAACT+AGG | - | chr4.3:82666976-82666995 | None:intergenic | 35.0% | |
| CTAAACAGGCCATAATAAAG+TGG | + | chr4.3:82667362-82667381 | MS.gene50013:intron | 35.0% | |
| GAAATTTCGGGGTTACAATT+TGG | + | chr4.3:82666208-82666227 | MS.gene50013:intron | 35.0% | |
| GAAGTTTCAGGGTTACAATT+TGG | + | chr4.3:82666071-82666090 | MS.gene50013:intron | 35.0% | |
| GATGTATTCAAAAGCTGTGT+TGG | + | chr4.3:82668039-82668058 | MS.gene50013:intron | 35.0% | |
| GGGGTACAATTTGAATTGAT+GGG | + | chr4.3:82665701-82665720 | MS.gene50013:intron | 35.0% | |
| GGGTACAATTTGAATTGATG+GGG | + | chr4.3:82665702-82665721 | MS.gene50013:intron | 35.0% | |
| TAAAGACTTGTGAGTCTGTT+TGG | - | chr4.3:82667313-82667332 | None:intergenic | 35.0% | |
| TATGATCAATATGGTGAGGA+GGG | + | chr4.3:82666548-82666567 | MS.gene50013:CDS | 35.0% | |
| TGTGTATGATCAATATGGTG+AGG | + | chr4.3:82666544-82666563 | MS.gene50013:CDS | 35.0% | |
| TTATGGAAACAGCTTATGAC+AGG | - | chr4.3:82667284-82667303 | None:intergenic | 35.0% | |
| TTGCATTTCGATCTATCTGA+AGG | - | chr4.3:82665391-82665410 | None:intergenic | 35.0% | |
| ! | AAAGATAACTTTTCCGGAGA+AGG | + | chr4.3:82668363-82668382 | MS.gene50013:CDS | 35.0% |
| ! | AAGATAACTTTTCCGGAGAA+GGG | + | chr4.3:82668364-82668383 | MS.gene50013:CDS | 35.0% |
| ! | ACATATTTTCCGAGTTCTTC+GGG | + | chr4.3:82666669-82666688 | MS.gene50013:CDS | 35.0% |
| ! | AGGGTTACAATTTGGAATGA+TGG | + | chr4.3:82665930-82665949 | MS.gene50013:intron | 35.0% |
| ! | ATGACCTTTTCTCTTCCTTT+AGG | + | chr4.3:82666774-82666793 | MS.gene50013:CDS | 35.0% |
| ! | GACATATTTTCCGAGTTCTT+CGG | + | chr4.3:82666668-82666687 | MS.gene50013:CDS | 35.0% |
| ! | GCTTCAGTTCTACTATTTTC+TGG | - | chr4.3:82667877-82667896 | None:intergenic | 35.0% |
| ! | GGGTTACAATTTGGAATGAT+GGG | + | chr4.3:82665931-82665950 | MS.gene50013:intron | 35.0% |
| ! | GGTTACAATTTGGAATGATG+GGG | + | chr4.3:82665932-82665951 | MS.gene50013:intron | 35.0% |
| ! | GGTTGCATAATTTGGAATGT+TGG | + | chr4.3:82665778-82665797 | MS.gene50013:intron | 35.0% |
| ! | TGCATAATTTGGAATGTTGG+GGG | + | chr4.3:82665781-82665800 | MS.gene50013:intron | 35.0% |
| ! | TGGATCATTTGGACATTTTG+GGG | + | chr4.3:82665838-82665857 | MS.gene50013:intron | 35.0% |
| !! | ATCGCAAACTTGCTATGAAA+TGG | + | chr4.3:82665435-82665454 | MS.gene50013:CDS | 35.0% |
| !! | TTTGGAATTGTGGGTTTTTC+CGG | + | chr4.3:82666131-82666150 | MS.gene50013:intron | 35.0% |
| !! | TTTGGACATTTGGAGTTTTG+AGG | + | chr4.3:82665983-82666002 | MS.gene50013:intron | 35.0% |
| !!! | CCTAGTTGCATTGGTTTTAT+TGG | + | chr4.3:82666973-82666992 | MS.gene50013:intron | 35.0% |
| !!! | TGCAAGCAATTTTAGCTGAT+GGG | + | chr4.3:82665870-82665889 | MS.gene50013:intron | 35.0% |
| !!! | TTGCAAGCAATTTTAGCTGA+TGG | + | chr4.3:82665869-82665888 | MS.gene50013:intron | 35.0% |
| !!! | TTGGACATTTTGGGGTTTTT+GGG | + | chr4.3:82665846-82665865 | MS.gene50013:intron | 35.0% |
| !!! | TTTGGACATTTTGGGGTTTT+TGG | + | chr4.3:82665845-82665864 | MS.gene50013:intron | 35.0% |
| AAACAAGGTCTGCAGGTATA+AGG | - | chr4.3:82668405-82668424 | None:intergenic | 40.0% | |
| AATATGTCATCCGCACTTCT+CGG | - | chr4.3:82666656-82666675 | None:intergenic | 40.0% | |
| AATTTCCGTTAAGGCCTGTT+CGG | + | chr4.3:82667114-82667133 | MS.gene50013:intron | 40.0% | |
| AGTCTGTTTGGAAGAGCTTA+TGG | - | chr4.3:82667301-82667320 | None:intergenic | 40.0% | |
| ATGATCAATATGGTGAGGAG+GGG | + | chr4.3:82666549-82666568 | MS.gene50013:CDS | 40.0% | |
| CAAGGCAATGTTCTCTCTAT+CGG | - | chr4.3:82666845-82666864 | None:intergenic | 40.0% | |
| CCTAAGGAACCTTCCAAAAA+GGG | + | chr4.3:82668628-82668647 | MS.gene50013:CDS | 40.0% | |
| CCTTCAATTTCCTACAGCAT+CGG | - | chr4.3:82667816-82667835 | None:intergenic | 40.0% | |
| CTAACAATTGAGATCAAGCC+AGG | + | chr4.3:82668325-82668344 | MS.gene50013:CDS | 40.0% | |
| GTATGATCAATATGGTGAGG+AGG | + | chr4.3:82666547-82666566 | MS.gene50013:CDS | 40.0% | |
| TAAAATTCCGCTGTGCTGTA+GGG | + | chr4.3:82668168-82668187 | MS.gene50013:intron | 40.0% | |
| TACAAATCCTCCAAACTGCA+AGG | - | chr4.3:82666863-82666882 | None:intergenic | 40.0% | |
| TCCTAAGGAACCTTCCAAAA+AGG | + | chr4.3:82668627-82668646 | MS.gene50013:CDS | 40.0% | |
| TGATCATACACCTCTCTCTT+TGG | - | chr4.3:82666390-82666409 | None:intergenic | 40.0% | |
| TGCTCTGATGTAAGTCTTGA+TGG | - | chr4.3:82668685-82668704 | None:intergenic | 40.0% | |
| TGTCAATAATCGCTTGATGC+CGG | - | chr4.3:82668713-82668732 | None:intergenic | 40.0% | |
| TTAAAATTCCGCTGTGCTGT+AGG | + | chr4.3:82668167-82668186 | MS.gene50013:intron | 40.0% | |
| TTCCGGGTTACAATTTGGAT+TGG | + | chr4.3:82666148-82666167 | MS.gene50013:intron | 40.0% | |
| TTGGAAGGTTCCTTAGGAAT+TGG | - | chr4.3:82668625-82668644 | None:intergenic | 40.0% | |
| TTTATCCGAACAGGCCTTAA+CGG | - | chr4.3:82667122-82667141 | None:intergenic | 40.0% | |
| TTTGTTCCTTTCTTCCAACC+TGG | - | chr4.3:82668346-82668365 | None:intergenic | 40.0% | |
| ! | AGAGAGGTGTATGATCAGTA+TGG | + | chr4.3:82666393-82666412 | MS.gene50013:intron | 40.0% |
| ! | ATAATTTGGAATGTTGGGGG+TGG | + | chr4.3:82665784-82665803 | MS.gene50013:intron | 40.0% |
| ! | CTCAAGTTTCCCTTTTTGGA+AGG | - | chr4.3:82668640-82668659 | None:intergenic | 40.0% |
| ! | GACTCTCAAGTTTCCCTTTT+TGG | - | chr4.3:82668644-82668663 | None:intergenic | 40.0% |
| ! | GGGGGTACAATTTGAATTGA+TGG | + | chr4.3:82665700-82665719 | MS.gene50013:intron | 40.0% |
| ! | GGGGTTGTAATTTGCATGTT+GGG | + | chr4.3:82665626-82665645 | MS.gene50013:intron | 40.0% |
| ! | GGTTTTTCCGGGTTACAATT+TGG | + | chr4.3:82666143-82666162 | MS.gene50013:intron | 40.0% |
| ! | TAAAGTGGCAGATTTTGCGA+TGG | + | chr4.3:82667377-82667396 | MS.gene50013:intron | 40.0% |
| ! | TCATACACAGCTCTCTTTTG+TGG | - | chr4.3:82666533-82666552 | None:intergenic | 40.0% |
| ! | TGCACTTTTCCTCATCACAT+TGG | - | chr4.3:82666822-82666841 | None:intergenic | 40.0% |
| ! | TGGACTAATGATGGTGTTGA+CGG | - | chr4.3:82668569-82668588 | None:intergenic | 40.0% |
| ! | TGGGGTTGTAATTTGCATGT+TGG | + | chr4.3:82665625-82665644 | MS.gene50013:intron | 40.0% |
| ! | TTCGGGTTTCAAAGACCATT+TGG | + | chr4.3:82666686-82666705 | MS.gene50013:CDS | 40.0% |
| ! | TTGGAATTGTGGGTTTTTCC+GGG | + | chr4.3:82666132-82666151 | MS.gene50013:intron | 40.0% |
| !! | AGAGATGTTACTGATTCCAG+CGG | + | chr4.3:82666914-82666933 | MS.gene50013:CDS | 40.0% |
| !! | GTTCTACTATTTTCTGGCAC+AGG | - | chr4.3:82667871-82667890 | None:intergenic | 40.0% |
| !! | TCTTTGAAACCCGAAGAACT+CGG | - | chr4.3:82666681-82666700 | None:intergenic | 40.0% |
| !!! | GCAAGCAATTTTAGCTGATG+GGG | + | chr4.3:82665871-82665890 | MS.gene50013:intron | 40.0% |
| AAACTAGAAAACTCACCCGC+TGG | - | chr4.3:82666933-82666952 | None:intergenic | 45.0% | |
| AACATTGCCTTGCAGTTTGG+AGG | + | chr4.3:82666853-82666872 | MS.gene50013:CDS | 45.0% | |
| AAGGAAGCCTACTACAGTTG+AGG | + | chr4.3:82668297-82668316 | MS.gene50013:intron | 45.0% | |
| AAGGATCTGCCAATGTGATG+AGG | + | chr4.3:82666810-82666829 | MS.gene50013:CDS | 45.0% | |
| AGCCTCATACTGTCTTCAAG+AGG | + | chr4.3:82668440-82668459 | MS.gene50013:CDS | 45.0% | |
| CAATTGAGATCAAGCCAGGT+TGG | + | chr4.3:82668329-82668348 | MS.gene50013:CDS | 45.0% | |
| CATACTGTCTTCAAGAGGGA+CGG | + | chr4.3:82668445-82668464 | MS.gene50013:CDS | 45.0% | |
| CCGATGCTGTAGGAAATTGA+AGG | + | chr4.3:82667813-82667832 | MS.gene50013:intron | 45.0% | |
| CTCTGTTCATTTCCCTTCTC+CGG | - | chr4.3:82668379-82668398 | None:intergenic | 45.0% | |
| CTTACATCAGAGCAGAAGAC+CGG | + | chr4.3:82668691-82668710 | MS.gene50013:CDS | 45.0% | |
| CTTTCCGAGGGGAATGTTTA+GGG | + | chr4.3:82666751-82666770 | MS.gene50013:CDS | 45.0% | |
| GAGAACATTGCCTTGCAGTT+TGG | + | chr4.3:82666850-82666869 | MS.gene50013:CDS | 45.0% | |
| GAGAAGGGAAATGAACAGAG+AGG | + | chr4.3:82668379-82668398 | MS.gene50013:CDS | 45.0% | |
| GAGTGATCAACCAAAGAGAG+AGG | + | chr4.3:82666377-82666396 | MS.gene50013:intron | 45.0% | |
| GCCTCATACTGTCTTCAAGA+GGG | + | chr4.3:82668441-82668460 | MS.gene50013:CDS | 45.0% | |
| GCTGGAATCAGTAACATCTC+TGG | - | chr4.3:82666915-82666934 | None:intergenic | 45.0% | |
| GGATTGAACCGGAACATTGT+CGG | - | chr4.3:82666635-82666654 | None:intergenic | 45.0% | |
| GGGTTTCAAAGACCATTTGG+CGG | + | chr4.3:82666689-82666708 | MS.gene50013:CDS | 45.0% | |
| TCATCCCTAAACATTCCCCT+CGG | - | chr4.3:82666758-82666777 | None:intergenic | 45.0% | |
| TCCCTCTTGAAGACAGTATG+AGG | - | chr4.3:82668445-82668464 | None:intergenic | 45.0% | |
| TTTCAAAGACCATTTGGCGG+TGG | + | chr4.3:82666692-82666711 | MS.gene50013:CDS | 45.0% | |
| ! | AGAGGGTATGCCAATTCCTA+AGG | + | chr4.3:82668612-82668631 | MS.gene50013:CDS | 45.0% |
| ! | ATCAAGCCAGGTTGGAAGAA+AGG | + | chr4.3:82668337-82668356 | MS.gene50013:CDS | 45.0% |
| ! | TCTCTTGTAGAAGCTCTGAC+AGG | + | chr4.3:82668496-82668515 | MS.gene50013:CDS | 45.0% |
| ! | TCTTCCTTTAGGAATTCGGC+CGG | + | chr4.3:82666785-82666804 | MS.gene50013:CDS | 45.0% |
| !! | CCCTTTTTGGAAGGTTCCTT+AGG | - | chr4.3:82668631-82668650 | None:intergenic | 45.0% |
| !! | GACTAATGATGGTGTTGACG+GGG | - | chr4.3:82668567-82668586 | None:intergenic | 45.0% |
| !! | GAGATGTTACTGATTCCAGC+GGG | + | chr4.3:82666915-82666934 | MS.gene50013:CDS | 45.0% |
| !! | GCTGATGGGGTGTTTGATTT+TGG | + | chr4.3:82665884-82665903 | MS.gene50013:intron | 45.0% |
| !! | GGACTAATGATGGTGTTGAC+GGG | - | chr4.3:82668568-82668587 | None:intergenic | 45.0% |
| AAATAGCTACCCTCGATGGG+AGG | + | chr4.3:82668530-82668549 | MS.gene50013:CDS | 50.0% | |
| AAGACCATTTGGCGGTGGAA+TGG | + | chr4.3:82666697-82666716 | MS.gene50013:CDS | 50.0% | |
| AGACCATTTGGCGGTGGAAT+GGG | + | chr4.3:82666698-82666717 | MS.gene50013:CDS | 50.0% | |
| ATATGGTGAGGAGGGGTTGA+AGG | + | chr4.3:82666556-82666575 | MS.gene50013:CDS | 50.0% | |
| CACATTGGCAGATCCTTCAC+CGG | - | chr4.3:82666807-82666826 | None:intergenic | 50.0% | |
| CATTGTCTAGCCGATGCTGT+AGG | + | chr4.3:82667803-82667822 | MS.gene50013:intron | 50.0% | |
| CCCAAATAGCTACCCTCGAT+GGG | + | chr4.3:82668527-82668546 | MS.gene50013:CDS | 50.0% | |
| CCCATCGAGGGTAGCTATTT+GGG | - | chr4.3:82668530-82668549 | None:intergenic | 50.0% | |
| CCTCGATGGGAGGAATCTTA+CGG | + | chr4.3:82668540-82668559 | MS.gene50013:CDS | 50.0% | |
| CGTAAGATTCCTCCCATCGA+GGG | - | chr4.3:82668542-82668561 | None:intergenic | 50.0% | |
| GCTTTCCGAGGGGAATGTTT+AGG | + | chr4.3:82666750-82666769 | MS.gene50013:CDS | 50.0% | |
| TATGGTGAGGAGGGGTTGAA+GGG | + | chr4.3:82666557-82666576 | MS.gene50013:CDS | 50.0% | |
| TCCCATCGAGGGTAGCTATT+TGG | - | chr4.3:82668531-82668550 | None:intergenic | 50.0% | |
| TTCACCGGCCGAATTCCTAA+AGG | - | chr4.3:82666792-82666811 | None:intergenic | 50.0% | |
| TTTAGGAATTCGGCCGGTGA+AGG | + | chr4.3:82666791-82666810 | MS.gene50013:CDS | 50.0% | |
| ! | TGAGTATCGCAGAACAGCAG+CGG | + | chr4.3:82668140-82668159 | MS.gene50013:intron | 50.0% |
| !! | ATGGTGGACCGACAATGTTC+CGG | + | chr4.3:82666624-82666643 | MS.gene50013:CDS | 50.0% |
| ATAGCAGCCCTACAGCACAG+CGG | - | chr4.3:82668178-82668197 | None:intergenic | 55.0% | |
| ATGGTGAGGAGGGGTTGAAG+GGG | + | chr4.3:82666558-82666577 | MS.gene50013:CDS | 55.0% | |
| CCGCACTTCTCGGATTGAAC+CGG | - | chr4.3:82666646-82666665 | None:intergenic | 55.0% | |
| CCGGTTCAATCCGAGAAGTG+CGG | + | chr4.3:82666643-82666662 | MS.gene50013:CDS | 55.0% | |
| CCGTAAGATTCCTCCCATCG+AGG | - | chr4.3:82668543-82668562 | None:intergenic | 55.0% | |
| CGGAAAATCCACCTGCACCT+GGG | - | chr4.3:82666595-82666614 | None:intergenic | 55.0% | |
| GAAAATCCACCTGCACCTGG+GGG | - | chr4.3:82666593-82666612 | None:intergenic | 55.0% | |
| GCCCAAATAGCTACCCTCGA+TGG | + | chr4.3:82668526-82668545 | MS.gene50013:CDS | 55.0% | |
| GGAAAATCCACCTGCACCTG+GGG | - | chr4.3:82666594-82666613 | None:intergenic | 55.0% | |
| GGCGGTGGAATGGGTGATAT+GGG | + | chr4.3:82666707-82666726 | MS.gene50013:CDS | 55.0% | |
| GGTGATATGGGTGGTCATCC+TGG | + | chr4.3:82666719-82666738 | MS.gene50013:CDS | 55.0% | |
| GGTGGAATGGGTGATATGGG+TGG | + | chr4.3:82666710-82666729 | MS.gene50013:CDS | 55.0% | |
| TCACCCATTCCACCGCCAAA+TGG | - | chr4.3:82666704-82666723 | None:intergenic | 55.0% | |
| TCGGAAAATCCACCTGCACC+TGG | - | chr4.3:82666596-82666615 | None:intergenic | 55.0% | |
| TGGCGGTGGAATGGGTGATA+TGG | + | chr4.3:82666706-82666725 | MS.gene50013:CDS | 55.0% | |
| ! | GGATTTTCCGACGGTGGTGA+TGG | + | chr4.3:82666605-82666624 | MS.gene50013:CDS | 55.0% |
| !! | GGTGCAGGTGGATTTTCCGA+CGG | + | chr4.3:82666596-82666615 | MS.gene50013:CDS | 55.0% |
| !! | TGGTGCATCTGGCTTTCCGA+GGG | + | chr4.3:82666739-82666758 | MS.gene50013:CDS | 55.0% |
| !!! | TTTTCCGACGGTGGTGATGG+TGG | + | chr4.3:82666608-82666627 | MS.gene50013:CDS | 55.0% |
| CTCGGAAAGCCAGATGCACC+AGG | - | chr4.3:82666740-82666759 | None:intergenic | 60.0% | |
| GGTGGTCATCCTGGTGCATC+TGG | + | chr4.3:82666728-82666747 | MS.gene50013:CDS | 60.0% | |
| !! | CTGGTGCATCTGGCTTTCCG+AGG | + | chr4.3:82666738-82666757 | MS.gene50013:CDS | 60.0% |
| !! | GCAGGTGGATTTTCCGACGG+TGG | + | chr4.3:82666599-82666618 | MS.gene50013:CDS | 60.0% |
| !! | GGTGCATCTGGCTTTCCGAG+GGG | + | chr4.3:82666740-82666759 | MS.gene50013:CDS | 60.0% |
| AATCCACCTGCACCTGGGGG+AGG | - | chr4.3:82666590-82666609 | None:intergenic | 65.0% | |
| CGGTCCACCATCACCACCGT+CGG | - | chr4.3:82666615-82666634 | None:intergenic | 65.0% | |
| AAGGGGCAGATGCCTCCCCC+AGG | + | chr4.3:82666575-82666594 | MS.gene50013:CDS | 70.0% | |
| ATGCCTCCCCCAGGTGCAGG+TGG | + | chr4.3:82666584-82666603 | MS.gene50013:CDS | 70.0% | |
| CAGATGCCTCCCCCAGGTGC+AGG | + | chr4.3:82666581-82666600 | MS.gene50013:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 82665365 | 82668741 | 82665365 | ID=MS.gene50013 |
| chr4.3 | mRNA | 82665365 | 82668741 | 82665365 | ID=MS.gene50013.t1;Parent=MS.gene50013 |
| chr4.3 | exon | 82665365 | 82665529 | 82665365 | ID=MS.gene50013.t1.exon1;Parent=MS.gene50013.t1 |
| chr4.3 | CDS | 82665365 | 82665529 | 82665365 | ID=cds.MS.gene50013.t1;Parent=MS.gene50013.t1 |
| chr4.3 | exon | 82666518 | 82666936 | 82666518 | ID=MS.gene50013.t1.exon2;Parent=MS.gene50013.t1 |
| chr4.3 | CDS | 82666518 | 82666936 | 82666518 | ID=cds.MS.gene50013.t1;Parent=MS.gene50013.t1 |
| chr4.3 | exon | 82668300 | 82668741 | 82668300 | ID=MS.gene50013.t1.exon3;Parent=MS.gene50013.t1 |
| chr4.3 | CDS | 82668300 | 82668741 | 82668300 | ID=cds.MS.gene50013.t1;Parent=MS.gene50013.t1 |
| Gene Sequence |
| Protein sequence |
