Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072961.t1 | AES73721.1 | 98.5 | 327 | 5 | 0 | 1 | 327 | 1 | 327 | 2.80E-181 | 644.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072961.t1 | Q9D832 | 44.4 | 340 | 168 | 8 | 1 | 325 | 1 | 334 | 6.3e-65 | 249.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072961.t1 | G7JBQ5 | 98.5 | 327 | 5 | 0 | 1 | 327 | 1 | 327 | 2.0e-181 | 644.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene072961 | MS.gene68222 | PPI |
| MS.gene50013 | MS.gene072961 | PPI |
| MS.gene072961 | MS.gene037465 | PPI |
| MS.gene072961 | MS.gene063165 | PPI |
| MS.gene072961 | MS.gene50004 | PPI |
| MS.gene072961 | MS.gene031675 | PPI |
| MS.gene006630 | MS.gene072961 | PPI |
| MS.gene072961 | MS.gene002499 | PPI |
| MS.gene01038 | MS.gene072961 | PPI |
| MS.gene064894 | MS.gene072961 | PPI |
| MS.gene072961 | MS.gene014281 | PPI |
| MS.gene045555 | MS.gene072961 | PPI |
| MS.gene072961 | MS.gene047354 | PPI |
| MS.gene01472 | MS.gene072961 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072961.t1 | MTR_3g108020 | 98.471 | 327 | 5 | 0 | 1 | 327 | 1 | 327 | 0.0 | 660 |
| MS.gene072961.t1 | MTR_4g015840 | 56.891 | 341 | 128 | 5 | 1 | 325 | 1 | 338 | 6.08e-128 | 369 |
| MS.gene072961.t1 | MTR_2g014470 | 56.637 | 339 | 134 | 5 | 1 | 326 | 1 | 339 | 5.05e-127 | 367 |
| MS.gene072961.t1 | MTR_2g090705 | 54.942 | 344 | 130 | 6 | 1 | 327 | 1 | 336 | 3.79e-125 | 362 |
| MS.gene072961.t1 | MTR_4g078850 | 54.755 | 347 | 133 | 8 | 1 | 326 | 1 | 344 | 2.30e-123 | 358 |
| MS.gene072961.t1 | MTR_2g014480 | 51.190 | 336 | 144 | 6 | 1 | 316 | 1 | 336 | 1.78e-107 | 317 |
| MS.gene072961.t1 | MTR_5g037880 | 42.553 | 329 | 123 | 4 | 4 | 325 | 5 | 274 | 4.95e-82 | 250 |
| MS.gene072961.t1 | MTR_4g015840 | 53.909 | 243 | 104 | 3 | 88 | 325 | 22 | 261 | 3.19e-81 | 248 |
| MS.gene072961.t1 | MTR_7g109340 | 34.251 | 327 | 201 | 7 | 5 | 326 | 27 | 344 | 2.15e-53 | 179 |
| MS.gene072961.t1 | MTR_3g437840 | 47.205 | 161 | 83 | 2 | 166 | 325 | 2 | 161 | 3.35e-46 | 154 |
| MS.gene072961.t1 | MTR_3g088140 | 43.931 | 173 | 96 | 1 | 148 | 319 | 175 | 347 | 1.55e-45 | 158 |
| MS.gene072961.t1 | MTR_3g437360 | 46.707 | 167 | 87 | 2 | 145 | 309 | 172 | 338 | 3.71e-45 | 157 |
| MS.gene072961.t1 | MTR_2g006890 | 42.564 | 195 | 107 | 2 | 129 | 318 | 174 | 368 | 1.69e-43 | 154 |
| MS.gene072961.t1 | MTR_8g006430 | 29.457 | 387 | 168 | 10 | 5 | 325 | 15 | 362 | 1.30e-32 | 125 |
| MS.gene072961.t1 | MTR_3g087030 | 29.345 | 351 | 201 | 12 | 3 | 318 | 81 | 419 | 9.11e-31 | 120 |
| MS.gene072961.t1 | MTR_3g437850 | 36.453 | 203 | 70 | 5 | 3 | 182 | 1 | 167 | 6.01e-30 | 112 |
| MS.gene072961.t1 | MTR_5g065160 | 27.841 | 352 | 207 | 11 | 4 | 322 | 83 | 420 | 2.86e-25 | 105 |
| MS.gene072961.t1 | MTR_5g065160 | 27.841 | 352 | 207 | 11 | 4 | 322 | 82 | 419 | 2.93e-25 | 105 |
| MS.gene072961.t1 | MTR_5g065160 | 27.841 | 352 | 207 | 11 | 4 | 322 | 83 | 420 | 5.33e-25 | 105 |
| MS.gene072961.t1 | MTR_5g065160 | 27.841 | 352 | 207 | 11 | 4 | 322 | 76 | 413 | 5.38e-25 | 105 |
| MS.gene072961.t1 | MTR_3g027580 | 27.003 | 337 | 217 | 10 | 4 | 318 | 89 | 418 | 7.27e-23 | 99.0 |
| MS.gene072961.t1 | MTR_2g087660 | 34.965 | 143 | 91 | 1 | 185 | 325 | 216 | 358 | 1.96e-21 | 94.4 |
| MS.gene072961.t1 | MTR_4g023470 | 27.381 | 336 | 218 | 10 | 5 | 318 | 87 | 418 | 2.58e-20 | 91.3 |
| MS.gene072961.t1 | MTR_4g050420 | 32.867 | 143 | 94 | 1 | 185 | 325 | 214 | 356 | 7.79e-19 | 87.0 |
| MS.gene072961.t1 | MTR_7g112360 | 36.552 | 145 | 68 | 5 | 5 | 129 | 17 | 157 | 1.52e-18 | 81.6 |
| MS.gene072961.t1 | MTR_7g101070 | 53.846 | 65 | 30 | 0 | 4 | 68 | 358 | 422 | 1.77e-18 | 86.3 |
| MS.gene072961.t1 | MTR_7g112360 | 53.030 | 66 | 28 | 1 | 5 | 67 | 17 | 82 | 6.36e-18 | 78.6 |
| MS.gene072961.t1 | MTR_2g104030 | 41.818 | 110 | 58 | 2 | 4 | 113 | 70 | 173 | 1.24e-16 | 80.9 |
| MS.gene072961.t1 | MTR_1g029460 | 43.137 | 102 | 44 | 4 | 3 | 103 | 5 | 93 | 8.54e-15 | 75.1 |
| MS.gene072961.t1 | MTR_5g065860 | 51.562 | 64 | 30 | 1 | 4 | 67 | 48 | 110 | 1.20e-14 | 70.5 |
| MS.gene072961.t1 | MTR_4g085070 | 43.210 | 81 | 39 | 2 | 11 | 88 | 19 | 95 | 1.81e-14 | 70.5 |
| MS.gene072961.t1 | MTR_1g110310 | 47.887 | 71 | 36 | 1 | 4 | 74 | 16 | 85 | 2.87e-14 | 73.6 |
| MS.gene072961.t1 | MTR_8g022310 | 43.478 | 69 | 34 | 1 | 4 | 67 | 10 | 78 | 1.70e-13 | 68.9 |
| MS.gene072961.t1 | MTR_8g022310 | 43.478 | 69 | 34 | 1 | 4 | 67 | 10 | 78 | 2.81e-13 | 68.9 |
| MS.gene072961.t1 | MTR_8g022310 | 43.478 | 69 | 34 | 1 | 4 | 67 | 10 | 78 | 3.03e-13 | 67.8 |
| MS.gene072961.t1 | MTR_8g022310 | 43.478 | 69 | 34 | 1 | 4 | 67 | 10 | 78 | 3.37e-13 | 68.2 |
| MS.gene072961.t1 | MTR_1g052110 | 46.154 | 65 | 34 | 1 | 6 | 70 | 40 | 103 | 4.95e-13 | 68.9 |
| MS.gene072961.t1 | MTR_5g035770 | 46.250 | 80 | 41 | 2 | 4 | 83 | 25 | 102 | 5.04e-13 | 69.7 |
| MS.gene072961.t1 | MTR_5g012530 | 43.243 | 74 | 40 | 1 | 4 | 75 | 12 | 85 | 5.16e-13 | 70.1 |
| MS.gene072961.t1 | MTR_6g027110 | 40.000 | 75 | 41 | 1 | 3 | 73 | 1 | 75 | 9.54e-13 | 65.1 |
| MS.gene072961.t1 | MTR_7g069480 | 44.286 | 70 | 37 | 1 | 3 | 72 | 26 | 93 | 1.17e-12 | 68.9 |
| MS.gene072961.t1 | MTR_5g004570 | 40.000 | 100 | 48 | 3 | 4 | 103 | 6 | 93 | 1.65e-12 | 66.6 |
| MS.gene072961.t1 | MTR_2g087660 | 32.353 | 102 | 67 | 1 | 185 | 284 | 216 | 317 | 1.96e-12 | 67.4 |
| MS.gene072961.t1 | MTR_6g027030 | 41.333 | 75 | 40 | 1 | 3 | 73 | 1 | 75 | 3.91e-12 | 65.1 |
| MS.gene072961.t1 | MTR_7g092380 | 43.077 | 65 | 36 | 1 | 6 | 70 | 24 | 87 | 5.18e-12 | 65.9 |
| MS.gene072961.t1 | MTR_8g037810 | 39.216 | 102 | 59 | 2 | 5 | 106 | 7 | 105 | 8.44e-12 | 65.5 |
| MS.gene072961.t1 | MTR_6g026940 | 43.077 | 65 | 33 | 1 | 3 | 63 | 1 | 65 | 2.85e-11 | 62.0 |
| MS.gene072961.t1 | MTR_8g081620 | 40.845 | 71 | 41 | 1 | 5 | 74 | 61 | 131 | 3.22e-11 | 62.0 |
| MS.gene072961.t1 | MTR_3g100330 | 44.776 | 67 | 34 | 2 | 3 | 68 | 68 | 132 | 6.62e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072961.t1 | AT5G25530 | 68.732 | 339 | 94 | 3 | 1 | 327 | 1 | 339 | 6.61e-161 | 452 |
| MS.gene072961.t1 | AT5G25530 | 66.859 | 347 | 95 | 4 | 1 | 327 | 1 | 347 | 3.81e-158 | 446 |
| MS.gene072961.t1 | AT3G08910 | 55.060 | 336 | 124 | 4 | 1 | 325 | 1 | 320 | 2.28e-126 | 364 |
| MS.gene072961.t1 | AT5G01390 | 56.140 | 342 | 124 | 6 | 1 | 325 | 1 | 333 | 4.32e-126 | 364 |
| MS.gene072961.t1 | AT1G10350 | 54.728 | 349 | 135 | 4 | 1 | 327 | 1 | 348 | 1.28e-125 | 363 |
| MS.gene072961.t1 | AT2G20560 | 55.718 | 341 | 132 | 6 | 1 | 326 | 1 | 337 | 1.91e-125 | 363 |
| MS.gene072961.t1 | AT1G59725 | 54.094 | 342 | 130 | 5 | 1 | 327 | 1 | 330 | 3.47e-121 | 352 |
| MS.gene072961.t1 | AT4G28480 | 55.172 | 348 | 134 | 3 | 1 | 326 | 1 | 348 | 6.43e-121 | 352 |
| MS.gene072961.t1 | AT3G47940 | 50.140 | 357 | 139 | 4 | 1 | 327 | 1 | 348 | 3.69e-115 | 337 |
| MS.gene072961.t1 | AT5G01390 | 49.254 | 335 | 100 | 5 | 1 | 325 | 1 | 275 | 2.93e-103 | 304 |
| MS.gene072961.t1 | AT4G28480 | 48.012 | 327 | 132 | 5 | 1 | 326 | 1 | 290 | 1.08e-95 | 285 |
| MS.gene072961.t1 | AT5G01390 | 41.493 | 335 | 87 | 6 | 1 | 325 | 1 | 236 | 3.48e-74 | 229 |
| MS.gene072961.t1 | AT2G20550 | 43.643 | 291 | 126 | 6 | 63 | 326 | 5 | 284 | 4.11e-69 | 217 |
| MS.gene072961.t1 | AT2G20550 | 43.643 | 291 | 126 | 6 | 63 | 326 | 5 | 284 | 4.11e-69 | 217 |
| MS.gene072961.t1 | AT5G01390 | 53.886 | 193 | 75 | 5 | 1 | 182 | 1 | 190 | 8.11e-60 | 192 |
| MS.gene072961.t1 | AT1G44160 | 48.315 | 178 | 92 | 0 | 148 | 325 | 176 | 353 | 2.70e-51 | 174 |
| MS.gene072961.t1 | AT1G11040 | 45.000 | 180 | 99 | 0 | 146 | 325 | 253 | 432 | 3.30e-47 | 165 |
| MS.gene072961.t1 | AT3G62600 | 29.444 | 360 | 182 | 6 | 2 | 326 | 24 | 346 | 9.78e-44 | 154 |
| MS.gene072961.t1 | AT2G22360 | 27.168 | 346 | 212 | 12 | 4 | 318 | 86 | 422 | 7.73e-24 | 101 |
| MS.gene072961.t1 | AT5G22060 | 37.063 | 143 | 88 | 1 | 185 | 325 | 217 | 359 | 2.91e-23 | 99.8 |
| MS.gene072961.t1 | AT5G22060 | 33.178 | 214 | 103 | 3 | 5 | 218 | 15 | 188 | 7.59e-17 | 81.3 |
| MS.gene072961.t1 | AT3G44110 | 36.364 | 143 | 89 | 1 | 185 | 325 | 216 | 358 | 1.26e-21 | 95.1 |
| MS.gene072961.t1 | AT1G28210 | 25.501 | 349 | 215 | 11 | 4 | 322 | 48 | 381 | 2.03e-19 | 88.6 |
| MS.gene072961.t1 | AT1G28210 | 25.501 | 349 | 215 | 11 | 4 | 322 | 48 | 381 | 2.26e-19 | 88.6 |
| MS.gene072961.t1 | AT1G28210 | 25.501 | 349 | 215 | 11 | 4 | 322 | 48 | 381 | 2.62e-19 | 88.6 |
| MS.gene072961.t1 | AT1G80030 | 44.762 | 105 | 52 | 2 | 4 | 108 | 75 | 173 | 5.94e-18 | 84.7 |
| MS.gene072961.t1 | AT1G80030 | 44.762 | 105 | 52 | 2 | 4 | 108 | 75 | 173 | 7.48e-18 | 84.3 |
| MS.gene072961.t1 | AT1G80030 | 44.762 | 105 | 52 | 2 | 4 | 108 | 75 | 173 | 7.48e-18 | 84.3 |
| MS.gene072961.t1 | AT1G80030 | 44.762 | 105 | 52 | 2 | 4 | 108 | 75 | 173 | 7.48e-18 | 84.3 |
| MS.gene072961.t1 | AT3G17830 | 54.054 | 74 | 32 | 1 | 2 | 75 | 61 | 132 | 1.34e-17 | 84.0 |
| MS.gene072961.t1 | AT1G56300 | 54.545 | 66 | 27 | 1 | 5 | 67 | 14 | 79 | 1.48e-17 | 77.8 |
| MS.gene072961.t1 | AT1G56300 | 54.545 | 66 | 27 | 1 | 5 | 67 | 14 | 79 | 2.07e-17 | 78.6 |
| MS.gene072961.t1 | AT4G39960 | 51.389 | 72 | 33 | 1 | 4 | 75 | 85 | 154 | 1.18e-16 | 80.9 |
| MS.gene072961.t1 | AT4G39960 | 51.389 | 72 | 33 | 1 | 4 | 75 | 85 | 154 | 1.18e-16 | 80.9 |
| MS.gene072961.t1 | AT5G48030 | 46.053 | 76 | 40 | 1 | 4 | 79 | 94 | 168 | 3.55e-16 | 79.3 |
| MS.gene072961.t1 | AT5G16650 | 52.239 | 67 | 31 | 1 | 4 | 70 | 11 | 76 | 2.08e-15 | 73.2 |
| MS.gene072961.t1 | AT5G16650 | 52.239 | 67 | 31 | 1 | 4 | 70 | 11 | 76 | 2.52e-15 | 72.0 |
| MS.gene072961.t1 | AT1G68370 | 47.887 | 71 | 36 | 1 | 4 | 74 | 17 | 86 | 1.62e-14 | 74.3 |
| MS.gene072961.t1 | AT2G41000 | 39.326 | 89 | 50 | 1 | 3 | 87 | 2 | 90 | 1.74e-14 | 71.6 |
| MS.gene072961.t1 | AT5G03160 | 46.154 | 65 | 35 | 0 | 4 | 68 | 370 | 434 | 2.25e-14 | 73.9 |
| MS.gene072961.t1 | AT1G59980 | 43.478 | 69 | 38 | 1 | 6 | 74 | 25 | 92 | 4.42e-14 | 72.8 |
| MS.gene072961.t1 | AT3G44110 | 34.513 | 113 | 72 | 1 | 185 | 295 | 216 | 328 | 4.95e-14 | 72.4 |
| MS.gene072961.t1 | AT2G41000 | 39.326 | 89 | 50 | 1 | 3 | 87 | 2 | 90 | 7.25e-14 | 69.3 |
| MS.gene072961.t1 | AT1G59980 | 43.478 | 69 | 38 | 1 | 6 | 74 | 25 | 92 | 9.44e-14 | 72.0 |
| MS.gene072961.t1 | AT1G71000 | 48.485 | 66 | 31 | 1 | 5 | 67 | 9 | 74 | 3.00e-13 | 67.4 |
| MS.gene072961.t1 | AT1G21080 | 41.584 | 101 | 46 | 3 | 3 | 103 | 5 | 92 | 3.46e-13 | 70.1 |
| MS.gene072961.t1 | AT1G21080 | 41.584 | 101 | 46 | 3 | 3 | 103 | 5 | 92 | 3.71e-13 | 70.1 |
| MS.gene072961.t1 | AT1G71000 | 48.485 | 66 | 31 | 1 | 5 | 67 | 9 | 74 | 3.76e-13 | 67.0 |
| MS.gene072961.t1 | AT2G21510 | 36.111 | 108 | 66 | 2 | 4 | 111 | 6 | 110 | 4.54e-13 | 69.7 |
| MS.gene072961.t1 | AT2G21510 | 36.111 | 108 | 66 | 2 | 4 | 111 | 6 | 110 | 4.54e-13 | 69.7 |
| MS.gene072961.t1 | AT2G21510 | 36.111 | 108 | 66 | 2 | 4 | 111 | 6 | 110 | 5.39e-13 | 69.3 |
| MS.gene072961.t1 | AT2G21510 | 36.111 | 108 | 66 | 2 | 4 | 111 | 6 | 110 | 5.68e-13 | 69.3 |
| MS.gene072961.t1 | AT2G21510 | 36.111 | 108 | 66 | 2 | 4 | 111 | 6 | 110 | 5.68e-13 | 69.3 |
| MS.gene072961.t1 | AT5G06910 | 46.154 | 65 | 34 | 1 | 6 | 70 | 31 | 94 | 1.09e-12 | 67.8 |
| MS.gene072961.t1 | AT5G05750 | 36.697 | 109 | 62 | 2 | 4 | 107 | 114 | 220 | 1.67e-12 | 67.4 |
| MS.gene072961.t1 | AT2G33735 | 43.077 | 65 | 36 | 1 | 4 | 68 | 22 | 85 | 2.23e-12 | 63.5 |
| MS.gene072961.t1 | AT2G33735 | 43.077 | 65 | 36 | 1 | 4 | 68 | 22 | 85 | 2.23e-12 | 63.5 |
| MS.gene072961.t1 | AT1G24120 | 42.500 | 80 | 44 | 2 | 4 | 83 | 20 | 97 | 3.93e-12 | 67.0 |
| MS.gene072961.t1 | AT1G76700 | 39.604 | 101 | 49 | 3 | 3 | 103 | 5 | 93 | 6.10e-12 | 66.6 |
| MS.gene072961.t1 | AT4G39150 | 34.259 | 108 | 68 | 2 | 4 | 111 | 6 | 110 | 6.24e-12 | 66.2 |
| MS.gene072961.t1 | AT4G39150 | 34.259 | 108 | 68 | 2 | 4 | 111 | 6 | 110 | 6.24e-12 | 66.2 |
| MS.gene072961.t1 | AT4G39150 | 34.259 | 108 | 68 | 2 | 4 | 111 | 6 | 110 | 6.24e-12 | 66.2 |
| MS.gene072961.t1 | AT5G49060 | 47.761 | 67 | 33 | 1 | 4 | 70 | 99 | 163 | 6.34e-12 | 66.2 |
| MS.gene072961.t1 | AT5G49060 | 47.761 | 67 | 33 | 1 | 4 | 70 | 99 | 163 | 6.34e-12 | 66.2 |
| MS.gene072961.t1 | AT4G13830 | 39.726 | 73 | 43 | 1 | 3 | 74 | 65 | 137 | 1.78e-11 | 62.0 |
| MS.gene072961.t1 | AT4G13830 | 39.726 | 73 | 43 | 1 | 3 | 74 | 65 | 137 | 2.09e-11 | 62.4 |
| MS.gene072961.t1 | AT2G35720 | 39.726 | 73 | 42 | 1 | 4 | 74 | 15 | 87 | 5.64e-11 | 63.9 |
Find 79 sgRNAs with CRISPR-Local
Find 144 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACTTGGTGACTCAGTTTC+TGG | 0.142352 | 3.1:+85831517 | None:intergenic |
| GGAAGTAGTCCCTTGAATTT+TGG | 0.174079 | 3.1:-85831451 | MS.gene072961:CDS |
| ATTAGTTGATTCCCTTTATC+TGG | 0.206300 | 3.1:+85830626 | None:intergenic |
| TGACCGGGTTCCTTTGTTAT+TGG | 0.230224 | 3.1:+85830380 | None:intergenic |
| AAGATATCTTCTGCACTTCT+TGG | 0.243008 | 3.1:+85831487 | None:intergenic |
| GATATCTTTGCAGAATTCTT+TGG | 0.257479 | 3.1:-85831472 | MS.gene072961:CDS |
| AGTTTGGAGGAGTTGTATTC+TGG | 0.261924 | 3.1:-85831280 | MS.gene072961:CDS |
| AAGATAACATTCCCAGATAA+AGG | 0.288781 | 3.1:-85830638 | MS.gene072961:CDS |
| GACTAAATTGCCTTGTAGTT+TGG | 0.302178 | 3.1:-85831296 | MS.gene072961:CDS |
| TCAACAGGCGGTGGTTTCTT+TGG | 0.314972 | 3.1:+85831319 | None:intergenic |
| TTATTGTTAGGGTTCTTGTC+AGG | 0.339068 | 3.1:+85831998 | None:intergenic |
| TTTAGTGCAGCACGTTGTTC+TGG | 0.340516 | 3.1:+85830305 | None:intergenic |
| TAACAAAGGAACCCGGTCAT+AGG | 0.345303 | 3.1:-85830376 | MS.gene072961:CDS |
| TCATAAACATTCCTTCTTTG+AGG | 0.371333 | 3.1:+85831577 | None:intergenic |
| CTCAGAGATCTGTTTGAAAC+GGG | 0.404431 | 3.1:+85831961 | None:intergenic |
| ATAGAAAATTGGCTATGAAA+TGG | 0.433354 | 3.1:-85832024 | MS.gene072961:CDS |
| ACCATCAGATGGAAATCTCT+TGG | 0.438047 | 3.1:+85831408 | None:intergenic |
| TATTGTTAGGGTTCTTGTCA+GGG | 0.438705 | 3.1:+85831999 | None:intergenic |
| AACAAAGGAACCCGGTCATA+GGG | 0.440148 | 3.1:-85830375 | MS.gene072961:CDS |
| GAGCTTCTTGTTGCTAATGA+AGG | 0.446383 | 3.1:-85830407 | MS.gene072961:CDS |
| AGATAACATTCCCAGATAAA+GGG | 0.448544 | 3.1:-85830637 | MS.gene072961:CDS |
| ATCACAAATACAAGATCTGC+TGG | 0.449360 | 3.1:+85830593 | None:intergenic |
| CAAGGCAATTTAGTCTCAAC+AGG | 0.460386 | 3.1:+85831304 | None:intergenic |
| TTTGTTCCTTTCTTCCATCC+CGG | 0.465213 | 3.1:+85830659 | None:intergenic |
| TAAATTGCCTTGTAGTTTGG+AGG | 0.472522 | 3.1:-85831293 | MS.gene072961:CDS |
| TGCTGCACTAAAGCGAGCAT+TGG | 0.473058 | 3.1:-85830294 | MS.gene072961:CDS |
| TTTCCATCTGATGGTGGAGC+AGG | 0.478052 | 3.1:-85831400 | MS.gene072961:CDS |
| GGTGACTCAGTTTCTGGTGA+TGG | 0.483765 | 3.1:+85831523 | None:intergenic |
| CATGAATTGTTCAAGAGAGA+TGG | 0.486072 | 3.1:-85830557 | MS.gene072961:CDS |
| TGATTTGAGGATCATATTTG+AGG | 0.486195 | 3.1:-85830351 | MS.gene072961:CDS |
| CCTCAAATCACCCCTATGAC+CGG | 0.487277 | 3.1:+85830364 | None:intergenic |
| ATTAAGCATTGAAGTAAAGC+CGG | 0.489224 | 3.1:-85830678 | MS.gene072961:CDS |
| ATATCACTAGCAGAAGCTAT+TGG | 0.492007 | 3.1:-85830509 | MS.gene072961:CDS |
| TTAGTTGATTCCCTTTATCT+GGG | 0.493209 | 3.1:+85830627 | None:intergenic |
| CCTCAGAGATCTGTTTGAAA+CGG | 0.493838 | 3.1:+85831960 | None:intergenic |
| CAAACGTAGTTTAAGTGTCC+CGG | 0.507158 | 3.1:-85830456 | MS.gene072961:CDS |
| GAGAACAAGGGTTAAAAGAA+AGG | 0.512568 | 3.1:-85831546 | MS.gene072961:CDS |
| GCTGCACTAAAGCGAGCATT+GGG | 0.516052 | 3.1:-85830293 | MS.gene072961:CDS |
| ATACAAGATCTGCTGGAAGT+TGG | 0.521115 | 3.1:+85830600 | None:intergenic |
| TTAAGCATTGAAGTAAAGCC+GGG | 0.521592 | 3.1:-85830677 | MS.gene072961:CDS |
| TCTGATGGTGGAGCAGGAAA+TGG | 0.522820 | 3.1:-85831394 | MS.gene072961:CDS |
| GGAAATCTCTTGGACCTCCC+TGG | 0.526253 | 3.1:+85831418 | None:intergenic |
| AGGAATGTTTATGATCAGCT+TGG | 0.530957 | 3.1:-85831568 | MS.gene072961:CDS |
| TATGATCAGCTTGGAGAACA+AGG | 0.535520 | 3.1:-85831559 | MS.gene072961:CDS |
| ATGAATTGTTCAAGAGAGAT+GGG | 0.537623 | 3.1:-85830556 | MS.gene072961:CDS |
| GTAAAGCCGGGATGGAAGAA+AGG | 0.539331 | 3.1:-85830665 | MS.gene072961:CDS |
| AGAAAGAAAGAAAATGGGTG+TGG | 0.540206 | 3.1:-85832107 | None:intergenic |
| AGGACAGTAGTGGATTCCTA+CGG | 0.543187 | 3.1:-85831232 | MS.gene072961:CDS |
| TCCAAGAGATTTCCATCTGA+TGG | 0.546102 | 3.1:-85831409 | MS.gene072961:CDS |
| CAAGGAAAATGAAGATCTCA+AGG | 0.549083 | 3.1:-85831252 | MS.gene072961:CDS |
| AGTTGTATTCTGGTTCTACA+AGG | 0.550537 | 3.1:-85831270 | MS.gene072961:CDS |
| TCCAGATGATCCAAAATTCA+AGG | 0.552821 | 3.1:+85831441 | None:intergenic |
| CTTCTTGGATAAAATCCACT+TGG | 0.564609 | 3.1:+85831502 | None:intergenic |
| CTCAAATCACCCCTATGACC+GGG | 0.566792 | 3.1:+85830365 | None:intergenic |
| TTTCCTGCTCCACCATCAGA+TGG | 0.569001 | 3.1:+85831397 | None:intergenic |
| TACAACTCCTCCAAACTACA+AGG | 0.576940 | 3.1:+85831286 | None:intergenic |
| TATTGAGTGATCCTCAAAGA+AGG | 0.581960 | 3.1:-85831588 | MS.gene072961:CDS |
| GAAGATCTCAAGGACAGTAG+TGG | 0.582736 | 3.1:-85831242 | MS.gene072961:CDS |
| CCGGTCATAGGGGTGATTTG+AGG | 0.587567 | 3.1:-85830364 | MS.gene072961:CDS |
| AATTTAGTCTCAACAGGCGG+TGG | 0.590412 | 3.1:+85831310 | None:intergenic |
| GCATTGAAGTAAAGCCGGGA+TGG | 0.596425 | 3.1:-85830673 | MS.gene072961:CDS |
| TCACTAGCAGAAGCTATTGG+TGG | 0.596975 | 3.1:-85830506 | MS.gene072961:CDS |
| ACAGATCTCTGAGGCTTATG+CGG | 0.606049 | 3.1:-85831951 | MS.gene072961:intron |
| GGACAGTAGTGGATTCCTAC+GGG | 0.608784 | 3.1:-85831231 | MS.gene072961:intron |
| GCAGGAAATGGTGGATTCAG+CGG | 0.614762 | 3.1:-85831382 | MS.gene072961:CDS |
| CCAGATGATCCAAAATTCAA+GGG | 0.617332 | 3.1:+85831442 | None:intergenic |
| GATGGTGGAGCAGGAAATGG+TGG | 0.627146 | 3.1:-85831391 | MS.gene072961:CDS |
| ATGATCAGCTTGGAGAACAA+GGG | 0.627749 | 3.1:-85831558 | MS.gene072961:CDS |
| TGAAGGAATGCCAATAACAA+AGG | 0.628931 | 3.1:-85830390 | MS.gene072961:CDS |
| GCACTAAAGCGAGCATTGGG+TGG | 0.634751 | 3.1:-85830290 | MS.gene072961:CDS |
| CCAGAAACTGAGTCACCAAG+TGG | 0.638580 | 3.1:-85831517 | MS.gene072961:CDS |
| GCAACAAGAAGCTCATAACC+AGG | 0.643670 | 3.1:+85830416 | None:intergenic |
| TCTCTCTTGAACAATTCATG+AGG | 0.646574 | 3.1:+85830560 | None:intergenic |
| AAGAGATTTCCATCTGATGG+TGG | 0.651360 | 3.1:-85831406 | MS.gene072961:CDS |
| ACAAAGGAACCCGGTCATAG+GGG | 0.665969 | 3.1:-85830374 | MS.gene072961:CDS |
| CCGTTTCAAACAGATCTCTG+AGG | 0.684168 | 3.1:-85831960 | MS.gene072961:CDS |
| GGCAATTTAGTCTCAACAGG+CGG | 0.684270 | 3.1:+85831307 | None:intergenic |
| ATGCCAATAACAAAGGAACC+CGG | 0.688633 | 3.1:-85830383 | MS.gene072961:CDS |
| TTGGATCATCTGGACCAGGG+AGG | 0.719770 | 3.1:-85831432 | MS.gene072961:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTGAAAAAAAGAAAAGA+TGG | + | chr3.1:85830470-85830489 | None:intergenic | 15.0% |
| !! | AATTGAAAAAAAGAAAAGAT+GGG | + | chr3.1:85830469-85830488 | None:intergenic | 15.0% |
| !! | ATAATTAAATTCCCTAATAA+AGG | + | chr3.1:85830494-85830513 | None:intergenic | 15.0% |
| !! | ATACTCATGATTAAATTAAT+AGG | + | chr3.1:85831578-85831597 | None:intergenic | 15.0% |
| !! | TTATAACAAAAGATAAGATA+AGG | + | chr3.1:85831454-85831473 | None:intergenic | 15.0% |
| !!! | GAGAAATTTTTATGAATTTT+AGG | - | chr3.1:85830769-85830788 | MS.gene072961:intron | 15.0% |
| !!! | TTTTCAATTTTCCTTTATTA+GGG | - | chr3.1:85830480-85830499 | MS.gene072961:CDS | 15.0% |
| !!! | TTTTTCAATTTTCCTTTATT+AGG | - | chr3.1:85830479-85830498 | MS.gene072961:CDS | 15.0% |
| !! | AAATGAATCACAAAATGTTA+GGG | - | chr3.1:85830631-85830650 | MS.gene072961:CDS | 20.0% |
| !! | AACAAAAAACACAACAATAA+AGG | + | chr3.1:85831267-85831286 | None:intergenic | 20.0% |
| !! | ATTGAAAAAAAGAAAAGATG+GGG | + | chr3.1:85830468-85830487 | None:intergenic | 20.0% |
| !! | GCTTATAGTTTATATGAAAA+TGG | - | chr3.1:85831423-85831442 | MS.gene072961:CDS | 20.0% |
| !! | GTTGTTTATATAATATGCTT+GGG | - | chr3.1:85831284-85831303 | MS.gene072961:CDS | 20.0% |
| !! | TAAAGGTTCATATAATAAGT+TGG | + | chr3.1:85831250-85831269 | None:intergenic | 20.0% |
| !! | TAAATGAATCACAAAATGTT+AGG | - | chr3.1:85830630-85830649 | MS.gene072961:CDS | 20.0% |
| !!! | AAGATGTTTGTTTGTTTTAT+GGG | - | chr3.1:85831610-85831629 | MS.gene072961:intron | 20.0% |
| !!! | ATATCTTTTGATTCACAATA+AGG | + | chr3.1:85831855-85831874 | None:intergenic | 20.0% |
| !!! | GAAAAAAGCATATAGAAAAT+TGG | - | chr3.1:85830345-85830364 | MS.gene072961:CDS | 20.0% |
| !!! | TATGAAAACAAGTTGAAAAT+AGG | + | chr3.1:85831377-85831396 | None:intergenic | 20.0% |
| !!! | TGATATTATTTTGCAATACA+TGG | - | chr3.1:85830561-85830580 | MS.gene072961:CDS | 20.0% |
| !!! | TGTTGTTTATATAATATGCT+TGG | - | chr3.1:85831283-85831302 | MS.gene072961:CDS | 20.0% |
| !!! | TTCATATAATAAGTTGGATT+GGG | + | chr3.1:85831244-85831263 | None:intergenic | 20.0% |
| ! | ATAGAAAATTGGCTATGAAA+TGG | - | chr3.1:85830356-85830375 | MS.gene072961:CDS | 25.0% |
| ! | GGTATATAACTTCTTTGATA+CGG | + | chr3.1:85830716-85830735 | None:intergenic | 25.0% |
| ! | TTAAACTGATTATCCAAACA+AGG | - | chr3.1:85831519-85831538 | MS.gene072961:CDS | 25.0% |
| ! | TTCATATAGGAAAATGTTAG+TGG | - | chr3.1:85830660-85830679 | MS.gene072961:CDS | 25.0% |
| ! | TTTATATAATATGCTTGGGT+TGG | - | chr3.1:85831288-85831307 | MS.gene072961:CDS | 25.0% |
| !! | GGATTACTATAACATTTTGA+AGG | - | chr3.1:85830294-85830313 | MS.gene072961:CDS | 25.0% |
| !! | GTTCATATAATAAGTTGGAT+TGG | + | chr3.1:85831245-85831264 | None:intergenic | 25.0% |
| !! | TTTTATGTCATGGTAGAAAT+TGG | - | chr3.1:85830593-85830612 | MS.gene072961:CDS | 25.0% |
| !!! | ATGTTAGTGGTTAATTTGTT+AGG | - | chr3.1:85830673-85830692 | MS.gene072961:CDS | 25.0% |
| !!! | ATTATTTTGCAATACATGGA+GGG | - | chr3.1:85830565-85830584 | MS.gene072961:CDS | 25.0% |
| !!! | CAAGATGTTTGTTTGTTTTA+TGG | - | chr3.1:85831609-85831628 | MS.gene072961:intron | 25.0% |
| !!! | CAGCTTCTTTTTTATTGTTA+GGG | + | chr3.1:85830396-85830415 | None:intergenic | 25.0% |
| !!! | GTTAGGGTTTTTTTTCATAT+AGG | - | chr3.1:85830647-85830666 | MS.gene072961:CDS | 25.0% |
| !!! | TATTATTTTGCAATACATGG+AGG | - | chr3.1:85830564-85830583 | MS.gene072961:CDS | 25.0% |
| !!! | TCAGCTTCTTTTTTATTGTT+AGG | + | chr3.1:85830397-85830416 | None:intergenic | 25.0% |
| !!! | TGTTAGTGGTTAATTTGTTA+GGG | - | chr3.1:85830674-85830693 | MS.gene072961:CDS | 25.0% |
| !!! | TTACTATAACATTTTGAAGG+TGG | - | chr3.1:85830297-85830316 | MS.gene072961:CDS | 25.0% |
| AAGATAACATTCCCAGATAA+AGG | - | chr3.1:85831742-85831761 | MS.gene072961:intron | 30.0% | |
| AGATAACATTCCCAGATAAA+GGG | - | chr3.1:85831743-85831762 | MS.gene072961:intron | 30.0% | |
| ATGAATTGTTCAAGAGAGAT+GGG | - | chr3.1:85831824-85831843 | MS.gene072961:intron | 30.0% | |
| CATGTCGTTAATAAACAAGA+GGG | + | chr3.1:85830737-85830756 | None:intergenic | 30.0% | |
| GATATCTTTGCAGAATTCTT+TGG | - | chr3.1:85830908-85830927 | MS.gene072961:intron | 30.0% | |
| GGTAGAAATTGGAATTGAAA+TGG | - | chr3.1:85830604-85830623 | MS.gene072961:CDS | 30.0% | |
| TCAAGAAAATGCAACACATT+AGG | + | chr3.1:85830531-85830550 | None:intergenic | 30.0% | |
| TCATAAACATTCCTTCTTTG+AGG | + | chr3.1:85830806-85830825 | None:intergenic | 30.0% | |
| TCATGTCGTTAATAAACAAG+AGG | + | chr3.1:85830738-85830757 | None:intergenic | 30.0% | |
| TGATTTGAGGATCATATTTG+AGG | - | chr3.1:85832029-85832048 | MS.gene072961:CDS | 30.0% | |
| TTTATGGGTCAATTGTTCTA+AGG | - | chr3.1:85831625-85831644 | MS.gene072961:intron | 30.0% | |
| ! | ATTAGTTGATTCCCTTTATC+TGG | + | chr3.1:85831757-85831776 | None:intergenic | 30.0% |
| ! | TTAGTTGATTCCCTTTATCT+GGG | + | chr3.1:85831756-85831775 | None:intergenic | 30.0% |
| !! | ATTAAGCATTGAAGTAAAGC+CGG | - | chr3.1:85831702-85831721 | MS.gene072961:intron | 30.0% |
| !! | TTTGTTAGGGTTATTTTGTG+TGG | - | chr3.1:85830687-85830706 | MS.gene072961:CDS | 30.0% |
| AAGATATCTTCTGCACTTCT+TGG | + | chr3.1:85830896-85830915 | None:intergenic | 35.0% | |
| ACGTTTCGTTTATCATCGTT+TGG | - | chr3.1:85831173-85831192 | MS.gene072961:intron | 35.0% | |
| AGGAATGTTTATGATCAGCT+TGG | - | chr3.1:85830812-85830831 | MS.gene072961:intron | 35.0% | |
| AGGTCTAGGTTAGAGATATA+AGG | - | chr3.1:85831539-85831558 | MS.gene072961:CDS | 35.0% | |
| ATATCACTAGCAGAAGCTAT+TGG | - | chr3.1:85831871-85831890 | MS.gene072961:intron | 35.0% | |
| ATCACAAATACAAGATCTGC+TGG | + | chr3.1:85831790-85831809 | None:intergenic | 35.0% | |
| CAAGGAAAATGAAGATCTCA+AGG | - | chr3.1:85831128-85831147 | MS.gene072961:intron | 35.0% | |
| CATGAATTGTTCAAGAGAGA+TGG | - | chr3.1:85831823-85831842 | MS.gene072961:intron | 35.0% | |
| CCAGATGATCCAAAATTCAA+GGG | + | chr3.1:85830941-85830960 | None:intergenic | 35.0% | |
| CTTCTTGGATAAAATCCACT+TGG | + | chr3.1:85830881-85830900 | None:intergenic | 35.0% | |
| GAAGGTGGATAAAAATGCTA+CGG | - | chr3.1:85830312-85830331 | MS.gene072961:CDS | 35.0% | |
| GACTAAATTGCCTTGTAGTT+TGG | - | chr3.1:85831084-85831103 | MS.gene072961:intron | 35.0% | |
| GAGAACAAGGGTTAAAAGAA+AGG | - | chr3.1:85830834-85830853 | MS.gene072961:intron | 35.0% | |
| TAAATTGCCTTGTAGTTTGG+AGG | - | chr3.1:85831087-85831106 | MS.gene072961:intron | 35.0% | |
| TATTGAGTGATCCTCAAAGA+AGG | - | chr3.1:85830792-85830811 | MS.gene072961:intron | 35.0% | |
| TATTGTTAGGGTTCTTGTCA+GGG | + | chr3.1:85830384-85830403 | None:intergenic | 35.0% | |
| TCCAGATGATCCAAAATTCA+AGG | + | chr3.1:85830942-85830961 | None:intergenic | 35.0% | |
| TCTCTCTTGAACAATTCATG+AGG | + | chr3.1:85831823-85831842 | None:intergenic | 35.0% | |
| TGAAGGAATGCCAATAACAA+AGG | - | chr3.1:85831990-85832009 | MS.gene072961:CDS | 35.0% | |
| TGATTATCCAAACAAGGTCT+AGG | - | chr3.1:85831525-85831544 | MS.gene072961:CDS | 35.0% | |
| TTATTGTTAGGGTTCTTGTC+AGG | + | chr3.1:85830385-85830404 | None:intergenic | 35.0% | |
| ! | ATGATGACGAAAATTGCAGA+AGG | - | chr3.1:85831659-85831678 | MS.gene072961:intron | 35.0% |
| ! | TGATGACGAAAATTGCAGAA+GGG | - | chr3.1:85831660-85831679 | MS.gene072961:intron | 35.0% |
| !! | AGTTGTATTCTGGTTCTACA+AGG | - | chr3.1:85831110-85831129 | MS.gene072961:intron | 35.0% |
| !! | GTTCTGGTGTCAATTTTGTT+GGG | + | chr3.1:85832062-85832081 | None:intergenic | 35.0% |
| !! | TGTTCTGGTGTCAATTTTGT+TGG | + | chr3.1:85832063-85832082 | None:intergenic | 35.0% |
| !! | TTAAGCATTGAAGTAAAGCC+GGG | - | chr3.1:85831703-85831722 | MS.gene072961:intron | 35.0% |
| !!! | GAGGGTTTAGTTTTATGTCA+TGG | - | chr3.1:85830583-85830602 | MS.gene072961:CDS | 35.0% |
| AAGAGATTTCCATCTGATGG+TGG | - | chr3.1:85830974-85830993 | MS.gene072961:intron | 40.0% | |
| ACCATCAGATGGAAATCTCT+TGG | + | chr3.1:85830975-85830994 | None:intergenic | 40.0% | |
| AGTTTGGAGGAGTTGTATTC+TGG | - | chr3.1:85831100-85831119 | MS.gene072961:intron | 40.0% | |
| ATACAAGATCTGCTGGAAGT+TGG | + | chr3.1:85831783-85831802 | None:intergenic | 40.0% | |
| ATGATCAGCTTGGAGAACAA+GGG | - | chr3.1:85830822-85830841 | MS.gene072961:intron | 40.0% | |
| ATGCCAATAACAAAGGAACC+CGG | - | chr3.1:85831997-85832016 | MS.gene072961:CDS | 40.0% | |
| CAAACGTAGTTTAAGTGTCC+CGG | - | chr3.1:85831924-85831943 | MS.gene072961:intron | 40.0% | |
| CAAGGCAATTTAGTCTCAAC+AGG | + | chr3.1:85831079-85831098 | None:intergenic | 40.0% | |
| CCTCAGAGATCTGTTTGAAA+CGG | + | chr3.1:85830423-85830442 | None:intergenic | 40.0% | |
| GAGCTTCTTGTTGCTAATGA+AGG | - | chr3.1:85831973-85831992 | MS.gene072961:CDS | 40.0% | |
| GTGAAAAACATTGTGAGTCC+TGG | - | chr3.1:85831946-85831965 | MS.gene072961:intron | 40.0% | |
| TACAACTCCTCCAAACTACA+AGG | + | chr3.1:85831097-85831116 | None:intergenic | 40.0% | |
| TATGATCAGCTTGGAGAACA+AGG | - | chr3.1:85830821-85830840 | MS.gene072961:intron | 40.0% | |
| TCCAAGAGATTTCCATCTGA+TGG | - | chr3.1:85830971-85830990 | MS.gene072961:intron | 40.0% | |
| TCTCTAACCTAGACCTTGTT+TGG | + | chr3.1:85831535-85831554 | None:intergenic | 40.0% | |
| TTTGTTCCTTTCTTCCATCC+CGG | + | chr3.1:85831724-85831743 | None:intergenic | 40.0% | |
| ! | AATTTTGGATCATCTGGACC+AGG | - | chr3.1:85830944-85830963 | MS.gene072961:intron | 40.0% |
| ! | ATTTTGGATCATCTGGACCA+GGG | - | chr3.1:85830945-85830964 | MS.gene072961:intron | 40.0% |
| ! | CCCTTGAATTTTGGATCATC+TGG | - | chr3.1:85830938-85830957 | MS.gene072961:intron | 40.0% |
| ! | CTCAGAGATCTGTTTGAAAC+GGG | + | chr3.1:85830422-85830441 | None:intergenic | 40.0% |
| ! | GACTCACAATGTTTTTCACC+GGG | + | chr3.1:85831945-85831964 | None:intergenic | 40.0% |
| ! | GGAAGTAGTCCCTTGAATTT+TGG | - | chr3.1:85830929-85830948 | MS.gene072961:intron | 40.0% |
| ! | GGACTCACAATGTTTTTCAC+CGG | + | chr3.1:85831946-85831965 | None:intergenic | 40.0% |
| AACAAAGGAACCCGGTCATA+GGG | - | chr3.1:85832005-85832024 | MS.gene072961:CDS | 45.0% | |
| AATTTAGTCTCAACAGGCGG+TGG | + | chr3.1:85831073-85831092 | None:intergenic | 45.0% | |
| CCGTTTCAAACAGATCTCTG+AGG | - | chr3.1:85830420-85830439 | MS.gene072961:CDS | 45.0% | |
| GAAGATCTCAAGGACAGTAG+TGG | - | chr3.1:85831138-85831157 | MS.gene072961:intron | 45.0% | |
| GATAAACGAAACGTACCCGT+AGG | + | chr3.1:85831167-85831186 | None:intergenic | 45.0% | |
| GCAACAAGAAGCTCATAACC+AGG | + | chr3.1:85831967-85831986 | None:intergenic | 45.0% | |
| GGCAATTTAGTCTCAACAGG+CGG | + | chr3.1:85831076-85831095 | None:intergenic | 45.0% | |
| TAACAAAGGAACCCGGTCAT+AGG | - | chr3.1:85832004-85832023 | MS.gene072961:CDS | 45.0% | |
| TCACTAGCAGAAGCTATTGG+TGG | - | chr3.1:85831874-85831893 | MS.gene072961:intron | 45.0% | |
| TTTAGTGCAGCACGTTGTTC+TGG | + | chr3.1:85832078-85832097 | None:intergenic | 45.0% | |
| ! | TGACCGGGTTCCTTTGTTAT+TGG | + | chr3.1:85832003-85832022 | None:intergenic | 45.0% |
| !! | ACAGATCTCTGAGGCTTATG+CGG | - | chr3.1:85830429-85830448 | MS.gene072961:CDS | 45.0% |
| !! | AGGACAGTAGTGGATTCCTA+CGG | - | chr3.1:85831148-85831167 | MS.gene072961:intron | 45.0% |
| ACAAAGGAACCCGGTCATAG+GGG | - | chr3.1:85832006-85832025 | MS.gene072961:CDS | 50.0% | |
| CATCGTTTGGATCCTCTGCA+AGG | - | chr3.1:85831186-85831205 | MS.gene072961:intron | 50.0% | |
| CCAGAAACTGAGTCACCAAG+TGG | - | chr3.1:85830863-85830882 | MS.gene072961:intron | 50.0% | |
| CCTCAAATCACCCCTATGAC+CGG | + | chr3.1:85832019-85832038 | None:intergenic | 50.0% | |
| CTCAAATCACCCCTATGACC+GGG | + | chr3.1:85832018-85832037 | None:intergenic | 50.0% | |
| GCATTGAAGTAAAGCCGGGA+TGG | - | chr3.1:85831707-85831726 | MS.gene072961:intron | 50.0% | |
| GCTGCACTAAAGCGAGCATT+GGG | - | chr3.1:85832087-85832106 | MS.gene072961:CDS | 50.0% | |
| GGATTGGGATCTCCACTGAA+TGG | + | chr3.1:85831229-85831248 | None:intergenic | 50.0% | |
| GTAAAGCCGGGATGGAAGAA+AGG | - | chr3.1:85831715-85831734 | MS.gene072961:intron | 50.0% | |
| TCAACAGGCGGTGGTTTCTT+TGG | + | chr3.1:85831064-85831083 | None:intergenic | 50.0% | |
| TGCTGCACTAAAGCGAGCAT+TGG | - | chr3.1:85832086-85832105 | MS.gene072961:CDS | 50.0% | |
| TTTCCTGCTCCACCATCAGA+TGG | + | chr3.1:85830986-85831005 | None:intergenic | 50.0% | |
| ! | CCACTTGGTGACTCAGTTTC+TGG | + | chr3.1:85830866-85830885 | None:intergenic | 50.0% |
| !! | GCAGGAAATGGTGGATTCAG+CGG | - | chr3.1:85830998-85831017 | MS.gene072961:intron | 50.0% |
| !! | GGACAGTAGTGGATTCCTAC+GGG | - | chr3.1:85831149-85831168 | MS.gene072961:intron | 50.0% |
| !! | GGTGACTCAGTTTCTGGTGA+TGG | + | chr3.1:85830860-85830879 | None:intergenic | 50.0% |
| !! | TCTGATGGTGGAGCAGGAAA+TGG | - | chr3.1:85830986-85831005 | MS.gene072961:intron | 50.0% |
| !! | TTTCCATCTGATGGTGGAGC+AGG | - | chr3.1:85830980-85830999 | MS.gene072961:intron | 50.0% |
| CCGGTCATAGGGGTGATTTG+AGG | - | chr3.1:85832016-85832035 | MS.gene072961:CDS | 55.0% | |
| GCAATGGTGCAGCCATTCAG+TGG | - | chr3.1:85831214-85831233 | MS.gene072961:intron | 55.0% | |
| GGAAATCTCTTGGACCTCCC+TGG | + | chr3.1:85830965-85830984 | None:intergenic | 55.0% | |
| TTGGATCATCTGGACCAGGG+AGG | - | chr3.1:85830948-85830967 | MS.gene072961:intron | 55.0% | |
| !! | GATGGTGGAGCAGGAAATGG+TGG | - | chr3.1:85830989-85831008 | MS.gene072961:intron | 55.0% |
| !! | GCACTAAAGCGAGCATTGGG+TGG | - | chr3.1:85832090-85832109 | MS.gene072961:CDS | 55.0% |
| CCATTGCAGCAGCCTTGCAG+AGG | + | chr3.1:85831201-85831220 | None:intergenic | 60.0% | |
| CCTCTGCAAGGCTGCTGCAA+TGG | - | chr3.1:85831198-85831217 | MS.gene072961:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 85830286 | 85832116 | 85830286 | ID=MS.gene072961 |
| chr3.1 | mRNA | 85830286 | 85832116 | 85830286 | ID=MS.gene072961.t1;Parent=MS.gene072961 |
| chr3.1 | exon | 85831952 | 85832116 | 85831952 | ID=MS.gene072961.t1.exon1;Parent=MS.gene072961.t1 |
| chr3.1 | CDS | 85831952 | 85832116 | 85831952 | ID=cds.MS.gene072961.t1;Parent=MS.gene072961.t1 |
| chr3.1 | exon | 85831232 | 85831611 | 85831232 | ID=MS.gene072961.t1.exon2;Parent=MS.gene072961.t1 |
| chr3.1 | CDS | 85831232 | 85831611 | 85831232 | ID=cds.MS.gene072961.t1;Parent=MS.gene072961.t1 |
| chr3.1 | exon | 85830286 | 85830724 | 85830286 | ID=MS.gene072961.t1.exon3;Parent=MS.gene072961.t1 |
| chr3.1 | CDS | 85830286 | 85830724 | 85830286 | ID=cds.MS.gene072961.t1;Parent=MS.gene072961.t1 |
| Gene Sequence |
| Protein sequence |
