Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006630.t1 | XP_003607513.1 | 99.1 | 347 | 3 | 0 | 1 | 347 | 1 | 347 | 1.70E-189 | 671.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006630.t1 | Q24133 | 44.3 | 350 | 170 | 8 | 1 | 343 | 1 | 332 | 7.6e-69 | 262.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006630.t1 | B7FHS3 | 99.1 | 347 | 3 | 0 | 1 | 347 | 1 | 347 | 1.2e-189 | 671.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene006630 | MS.gene047354 | PPI |
| MS.gene006630 | MS.gene066761 | PPI |
| MS.gene006630 | MS.gene045555 | PPI |
| MS.gene006630 | MS.gene75767 | PPI |
| MS.gene006630 | MS.gene037465 | PPI |
| MS.gene006630 | MS.gene034468 | PPI |
| MS.gene006630 | MS.gene43051 | PPI |
| MS.gene006630 | MS.gene77100 | PPI |
| MS.gene045555 | MS.gene006630 | PPI |
| MS.gene006630 | MS.gene014782 | PPI |
| MS.gene006630 | MS.gene072961 | PPI |
| MS.gene006630 | MS.gene050322 | PPI |
| MS.gene006630 | MS.gene50004 | PPI |
| MS.gene006630 | MS.gene031675 | PPI |
| MS.gene006630 | MS.gene007227 | PPI |
| MS.gene006630 | MS.gene01038 | PPI |
| MS.gene006630 | MS.gene84339 | PPI |
| MS.gene006630 | MS.gene35396 | PPI |
| MS.gene006630 | MS.gene002499 | PPI |
| MS.gene006630 | MS.gene50013 | PPI |
| MS.gene006630 | MS.gene01472 | PPI |
| MS.gene66767 | MS.gene006630 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006630.t1 | MTR_4g078850 | 99.135 | 347 | 3 | 0 | 1 | 347 | 1 | 347 | 0.0 | 705 |
| MS.gene006630.t1 | MTR_2g014470 | 78.613 | 346 | 65 | 3 | 1 | 344 | 1 | 339 | 0.0 | 533 |
| MS.gene006630.t1 | MTR_2g090705 | 69.516 | 351 | 84 | 5 | 1 | 344 | 1 | 335 | 5.51e-171 | 479 |
| MS.gene006630.t1 | MTR_4g015840 | 66.857 | 350 | 103 | 3 | 1 | 346 | 1 | 341 | 1.71e-167 | 470 |
| MS.gene006630.t1 | MTR_2g014480 | 64.655 | 348 | 103 | 6 | 1 | 337 | 1 | 339 | 2.82e-146 | 416 |
| MS.gene006630.t1 | MTR_3g108020 | 55.491 | 346 | 130 | 6 | 1 | 343 | 1 | 325 | 2.00e-126 | 365 |
| MS.gene006630.t1 | MTR_4g015840 | 64.427 | 253 | 81 | 2 | 98 | 346 | 17 | 264 | 8.50e-112 | 326 |
| MS.gene006630.t1 | MTR_5g037880 | 53.073 | 179 | 84 | 0 | 169 | 347 | 100 | 278 | 9.77e-66 | 209 |
| MS.gene006630.t1 | MTR_5g037880 | 47.368 | 95 | 36 | 2 | 4 | 91 | 5 | 92 | 4.00e-19 | 86.3 |
| MS.gene006630.t1 | MTR_7g109340 | 35.043 | 351 | 182 | 8 | 5 | 343 | 27 | 343 | 7.56e-53 | 178 |
| MS.gene006630.t1 | MTR_3g437840 | 49.689 | 161 | 81 | 0 | 184 | 344 | 2 | 162 | 1.82e-52 | 171 |
| MS.gene006630.t1 | MTR_3g088140 | 43.716 | 183 | 102 | 1 | 166 | 347 | 175 | 357 | 2.53e-49 | 169 |
| MS.gene006630.t1 | MTR_8g006430 | 32.979 | 376 | 187 | 11 | 5 | 343 | 15 | 362 | 2.93e-47 | 165 |
| MS.gene006630.t1 | MTR_2g006890 | 44.022 | 184 | 102 | 1 | 165 | 347 | 196 | 379 | 3.25e-45 | 159 |
| MS.gene006630.t1 | MTR_3g437360 | 45.882 | 170 | 87 | 4 | 161 | 327 | 171 | 338 | 5.28e-42 | 149 |
| MS.gene006630.t1 | MTR_3g437360 | 54.430 | 79 | 35 | 1 | 3 | 80 | 4 | 82 | 1.80e-19 | 88.2 |
| MS.gene006630.t1 | MTR_3g437850 | 35.149 | 202 | 92 | 5 | 3 | 200 | 1 | 167 | 3.85e-30 | 113 |
| MS.gene006630.t1 | MTR_3g087030 | 28.232 | 379 | 197 | 12 | 4 | 342 | 82 | 425 | 4.34e-28 | 114 |
| MS.gene006630.t1 | MTR_2g087660 | 37.241 | 145 | 89 | 1 | 201 | 343 | 214 | 358 | 3.37e-26 | 108 |
| MS.gene006630.t1 | MTR_2g104030 | 28.042 | 378 | 212 | 11 | 4 | 344 | 70 | 424 | 1.08e-25 | 107 |
| MS.gene006630.t1 | MTR_4g050420 | 36.552 | 145 | 90 | 1 | 201 | 343 | 212 | 356 | 3.15e-25 | 105 |
| MS.gene006630.t1 | MTR_4g050420 | 60.563 | 71 | 23 | 2 | 5 | 75 | 14 | 79 | 2.85e-11 | 64.7 |
| MS.gene006630.t1 | MTR_5g065160 | 27.247 | 356 | 216 | 12 | 4 | 337 | 82 | 416 | 3.17e-25 | 105 |
| MS.gene006630.t1 | MTR_5g065160 | 27.247 | 356 | 216 | 12 | 4 | 337 | 83 | 417 | 3.19e-25 | 105 |
| MS.gene006630.t1 | MTR_5g065160 | 27.966 | 354 | 216 | 13 | 4 | 337 | 76 | 410 | 4.44e-25 | 105 |
| MS.gene006630.t1 | MTR_5g065160 | 27.966 | 354 | 216 | 13 | 4 | 337 | 83 | 417 | 4.71e-25 | 105 |
| MS.gene006630.t1 | MTR_7g101070 | 58.462 | 65 | 27 | 0 | 4 | 68 | 358 | 422 | 8.95e-20 | 90.5 |
| MS.gene006630.t1 | MTR_4g023470 | 27.273 | 352 | 216 | 12 | 5 | 336 | 87 | 418 | 2.28e-19 | 89.0 |
| MS.gene006630.t1 | MTR_5g065860 | 54.688 | 64 | 28 | 1 | 4 | 67 | 48 | 110 | 9.89e-17 | 76.6 |
| MS.gene006630.t1 | MTR_7g112360 | 50.000 | 66 | 30 | 1 | 5 | 67 | 17 | 82 | 1.14e-16 | 77.0 |
| MS.gene006630.t1 | MTR_7g112360 | 50.000 | 66 | 30 | 1 | 5 | 67 | 17 | 82 | 1.65e-16 | 75.1 |
| MS.gene006630.t1 | MTR_5g012530 | 48.649 | 74 | 36 | 1 | 4 | 75 | 12 | 85 | 2.34e-16 | 80.5 |
| MS.gene006630.t1 | MTR_2g087660 | 38.776 | 98 | 58 | 1 | 201 | 296 | 214 | 311 | 3.12e-16 | 79.0 |
| MS.gene006630.t1 | MTR_3g027580 | 54.795 | 73 | 28 | 2 | 4 | 74 | 89 | 158 | 1.95e-15 | 77.4 |
| MS.gene006630.t1 | MTR_7g069480 | 51.429 | 70 | 32 | 1 | 3 | 72 | 26 | 93 | 3.64e-15 | 77.0 |
| MS.gene006630.t1 | MTR_1g110310 | 50.704 | 71 | 34 | 1 | 4 | 74 | 16 | 85 | 9.20e-15 | 75.1 |
| MS.gene006630.t1 | MTR_8g022310 | 46.377 | 69 | 32 | 1 | 4 | 67 | 10 | 78 | 1.47e-14 | 72.0 |
| MS.gene006630.t1 | MTR_8g022310 | 46.377 | 69 | 32 | 1 | 4 | 67 | 10 | 78 | 2.52e-14 | 71.2 |
| MS.gene006630.t1 | MTR_8g022310 | 46.377 | 69 | 32 | 1 | 4 | 67 | 10 | 78 | 2.52e-14 | 71.2 |
| MS.gene006630.t1 | MTR_2g436560 | 38.583 | 127 | 61 | 4 | 4 | 124 | 104 | 219 | 2.55e-14 | 73.6 |
| MS.gene006630.t1 | MTR_4g085070 | 50.000 | 60 | 27 | 1 | 11 | 67 | 19 | 78 | 2.81e-14 | 70.1 |
| MS.gene006630.t1 | MTR_8g022310 | 46.377 | 69 | 32 | 1 | 4 | 67 | 10 | 78 | 3.18e-14 | 71.6 |
| MS.gene006630.t1 | MTR_6g027110 | 44.000 | 75 | 38 | 1 | 3 | 73 | 1 | 75 | 6.39e-14 | 68.6 |
| MS.gene006630.t1 | MTR_6g027030 | 44.000 | 75 | 38 | 1 | 3 | 73 | 1 | 75 | 2.00e-13 | 68.9 |
| MS.gene006630.t1 | MTR_1g029460 | 44.444 | 72 | 39 | 1 | 3 | 74 | 5 | 75 | 3.34e-13 | 70.5 |
| MS.gene006630.t1 | MTR_3g100330 | 49.254 | 67 | 31 | 2 | 3 | 68 | 68 | 132 | 4.61e-13 | 68.2 |
| MS.gene006630.t1 | MTR_6g026940 | 44.928 | 69 | 34 | 1 | 3 | 67 | 1 | 69 | 6.09e-13 | 67.0 |
| MS.gene006630.t1 | MTR_1g052110 | 49.231 | 65 | 32 | 1 | 6 | 70 | 40 | 103 | 6.59e-13 | 68.6 |
| MS.gene006630.t1 | MTR_5g035770 | 46.575 | 73 | 38 | 1 | 4 | 76 | 25 | 96 | 6.81e-13 | 69.7 |
| MS.gene006630.t1 | MTR_6g471050 | 25.284 | 352 | 207 | 14 | 30 | 347 | 7 | 336 | 1.45e-12 | 68.6 |
| MS.gene006630.t1 | MTR_7g092380 | 47.692 | 65 | 33 | 1 | 6 | 70 | 24 | 87 | 3.31e-12 | 66.6 |
| MS.gene006630.t1 | MTR_1g087580 | 35.659 | 129 | 76 | 4 | 222 | 345 | 59 | 185 | 2.98e-11 | 62.4 |
| MS.gene006630.t1 | MTR_3g099170 | 35.714 | 98 | 57 | 3 | 3 | 97 | 79 | 173 | 4.23e-11 | 64.7 |
| MS.gene006630.t1 | MTR_5g004570 | 45.070 | 71 | 38 | 1 | 4 | 74 | 6 | 75 | 7.26e-11 | 62.0 |
| MS.gene006630.t1 | MTR_7g016790 | 57.692 | 52 | 22 | 0 | 159 | 210 | 1 | 52 | 8.41e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006630.t1 | AT2G20560 | 77.168 | 346 | 66 | 3 | 1 | 343 | 1 | 336 | 0.0 | 527 |
| MS.gene006630.t1 | AT4G28480 | 71.591 | 352 | 86 | 3 | 1 | 343 | 1 | 347 | 2.92e-175 | 490 |
| MS.gene006630.t1 | AT3G08910 | 63.584 | 346 | 103 | 3 | 1 | 346 | 1 | 323 | 5.92e-160 | 451 |
| MS.gene006630.t1 | AT5G01390 | 62.644 | 348 | 112 | 5 | 1 | 344 | 1 | 334 | 7.78e-154 | 436 |
| MS.gene006630.t1 | AT4G28480 | 65.015 | 343 | 66 | 3 | 1 | 343 | 1 | 289 | 1.23e-149 | 423 |
| MS.gene006630.t1 | AT5G25530 | 55.866 | 358 | 124 | 6 | 1 | 344 | 1 | 338 | 2.03e-135 | 389 |
| MS.gene006630.t1 | AT1G10350 | 56.571 | 350 | 147 | 2 | 1 | 346 | 1 | 349 | 3.44e-134 | 386 |
| MS.gene006630.t1 | AT5G25530 | 54.645 | 366 | 124 | 7 | 1 | 344 | 1 | 346 | 1.47e-132 | 382 |
| MS.gene006630.t1 | AT1G59725 | 56.196 | 347 | 135 | 3 | 1 | 346 | 1 | 331 | 2.27e-130 | 376 |
| MS.gene006630.t1 | AT5G01390 | 54.942 | 344 | 87 | 3 | 1 | 344 | 1 | 276 | 1.07e-124 | 359 |
| MS.gene006630.t1 | AT3G47940 | 52.793 | 358 | 142 | 7 | 1 | 343 | 1 | 346 | 3.74e-120 | 350 |
| MS.gene006630.t1 | AT2G20550 | 55.789 | 285 | 77 | 3 | 104 | 343 | 3 | 283 | 5.67e-98 | 291 |
| MS.gene006630.t1 | AT2G20550 | 55.789 | 285 | 77 | 3 | 104 | 343 | 3 | 283 | 5.67e-98 | 291 |
| MS.gene006630.t1 | AT5G01390 | 46.512 | 344 | 77 | 4 | 1 | 344 | 1 | 237 | 1.57e-92 | 276 |
| MS.gene006630.t1 | AT5G01390 | 58.852 | 209 | 68 | 5 | 1 | 205 | 1 | 195 | 1.07e-72 | 225 |
| MS.gene006630.t1 | AT1G44160 | 48.404 | 188 | 97 | 0 | 160 | 347 | 170 | 357 | 1.25e-49 | 170 |
| MS.gene006630.t1 | AT3G62600 | 33.239 | 355 | 193 | 9 | 2 | 344 | 24 | 346 | 8.36e-47 | 162 |
| MS.gene006630.t1 | AT1G11040 | 42.778 | 180 | 103 | 0 | 164 | 343 | 253 | 432 | 4.05e-45 | 160 |
| MS.gene006630.t1 | AT3G44110 | 32.692 | 364 | 200 | 11 | 5 | 343 | 15 | 358 | 2.10e-38 | 142 |
| MS.gene006630.t1 | AT5G22060 | 32.692 | 364 | 201 | 12 | 5 | 343 | 15 | 359 | 1.63e-37 | 139 |
| MS.gene006630.t1 | AT1G80030 | 28.382 | 377 | 206 | 11 | 4 | 343 | 75 | 424 | 1.33e-27 | 113 |
| MS.gene006630.t1 | AT1G80030 | 28.382 | 377 | 206 | 11 | 4 | 343 | 75 | 424 | 1.70e-27 | 113 |
| MS.gene006630.t1 | AT1G80030 | 28.382 | 377 | 206 | 11 | 4 | 343 | 75 | 424 | 1.70e-27 | 113 |
| MS.gene006630.t1 | AT1G80030 | 28.382 | 377 | 206 | 11 | 4 | 343 | 75 | 424 | 1.70e-27 | 113 |
| MS.gene006630.t1 | AT5G48030 | 27.119 | 354 | 222 | 10 | 4 | 336 | 94 | 432 | 2.00e-24 | 103 |
| MS.gene006630.t1 | AT2G22360 | 64.000 | 75 | 21 | 2 | 4 | 76 | 86 | 156 | 7.11e-21 | 93.6 |
| MS.gene006630.t1 | AT3G44110 | 37.391 | 115 | 70 | 1 | 201 | 313 | 214 | 328 | 3.73e-20 | 90.5 |
| MS.gene006630.t1 | AT3G44110 | 59.155 | 71 | 24 | 2 | 5 | 75 | 15 | 80 | 6.88e-11 | 63.2 |
| MS.gene006630.t1 | AT4G39960 | 54.762 | 84 | 30 | 2 | 4 | 87 | 85 | 160 | 1.90e-19 | 89.4 |
| MS.gene006630.t1 | AT4G39960 | 54.762 | 84 | 30 | 2 | 4 | 87 | 85 | 160 | 1.90e-19 | 89.4 |
| MS.gene006630.t1 | AT3G17830 | 58.442 | 77 | 26 | 2 | 2 | 76 | 61 | 133 | 3.53e-19 | 89.0 |
| MS.gene006630.t1 | AT1G68370 | 54.930 | 71 | 31 | 1 | 4 | 74 | 17 | 86 | 1.55e-16 | 80.5 |
| MS.gene006630.t1 | AT5G03160 | 52.308 | 65 | 31 | 0 | 4 | 68 | 370 | 434 | 2.17e-16 | 80.5 |
| MS.gene006630.t1 | AT1G56300 | 50.000 | 66 | 30 | 1 | 5 | 67 | 14 | 79 | 3.55e-15 | 72.8 |
| MS.gene006630.t1 | AT1G56300 | 50.000 | 66 | 30 | 1 | 5 | 67 | 14 | 79 | 3.70e-15 | 71.6 |
| MS.gene006630.t1 | AT1G59980 | 47.826 | 69 | 35 | 1 | 6 | 74 | 25 | 92 | 4.10e-15 | 75.9 |
| MS.gene006630.t1 | AT1G59980 | 47.826 | 69 | 35 | 1 | 6 | 74 | 25 | 92 | 8.95e-15 | 75.5 |
| MS.gene006630.t1 | AT5G16650 | 53.125 | 64 | 29 | 1 | 4 | 67 | 11 | 73 | 9.49e-15 | 71.6 |
| MS.gene006630.t1 | AT2G35720 | 47.945 | 73 | 36 | 1 | 4 | 74 | 15 | 87 | 1.27e-14 | 75.1 |
| MS.gene006630.t1 | AT5G16650 | 53.125 | 64 | 29 | 1 | 4 | 67 | 11 | 73 | 1.43e-14 | 70.1 |
| MS.gene006630.t1 | AT3G08970 | 50.602 | 83 | 36 | 3 | 2 | 84 | 25 | 102 | 2.00e-14 | 74.7 |
| MS.gene006630.t1 | AT3G08970 | 50.602 | 83 | 36 | 3 | 2 | 84 | 25 | 102 | 2.00e-14 | 74.7 |
| MS.gene006630.t1 | AT2G41000 | 46.377 | 69 | 33 | 1 | 3 | 67 | 2 | 70 | 3.21e-14 | 71.2 |
| MS.gene006630.t1 | AT2G21510 | 51.389 | 72 | 34 | 1 | 4 | 75 | 6 | 76 | 3.86e-14 | 72.8 |
| MS.gene006630.t1 | AT2G21510 | 51.389 | 72 | 34 | 1 | 4 | 75 | 6 | 76 | 3.86e-14 | 72.8 |
| MS.gene006630.t1 | AT2G21510 | 51.389 | 72 | 34 | 1 | 4 | 75 | 6 | 76 | 4.64e-14 | 72.8 |
| MS.gene006630.t1 | AT2G21510 | 51.389 | 72 | 34 | 1 | 4 | 75 | 6 | 76 | 4.64e-14 | 72.8 |
| MS.gene006630.t1 | AT2G21510 | 51.389 | 72 | 34 | 1 | 4 | 75 | 6 | 76 | 6.43e-14 | 72.0 |
| MS.gene006630.t1 | AT2G41000 | 46.377 | 69 | 33 | 1 | 3 | 67 | 2 | 70 | 8.43e-14 | 69.3 |
| MS.gene006630.t1 | AT2G33735 | 44.615 | 65 | 35 | 1 | 4 | 68 | 22 | 85 | 2.20e-13 | 66.6 |
| MS.gene006630.t1 | AT2G33735 | 44.615 | 65 | 35 | 1 | 4 | 68 | 22 | 85 | 2.20e-13 | 66.6 |
| MS.gene006630.t1 | AT5G06910 | 47.692 | 65 | 33 | 1 | 6 | 70 | 31 | 94 | 2.46e-12 | 67.0 |
| MS.gene006630.t1 | AT4G39150 | 48.611 | 72 | 36 | 1 | 4 | 75 | 6 | 76 | 3.06e-12 | 67.4 |
| MS.gene006630.t1 | AT4G39150 | 48.611 | 72 | 36 | 1 | 4 | 75 | 6 | 76 | 3.06e-12 | 67.4 |
| MS.gene006630.t1 | AT4G39150 | 48.611 | 72 | 36 | 1 | 4 | 75 | 6 | 76 | 3.06e-12 | 67.4 |
| MS.gene006630.t1 | AT1G71000 | 45.455 | 66 | 33 | 1 | 5 | 67 | 9 | 74 | 3.38e-12 | 64.3 |
| MS.gene006630.t1 | AT1G24120 | 43.243 | 74 | 41 | 1 | 4 | 77 | 20 | 92 | 3.93e-12 | 67.4 |
| MS.gene006630.t1 | AT1G71000 | 45.455 | 66 | 33 | 1 | 5 | 67 | 9 | 74 | 8.62e-12 | 63.2 |
| MS.gene006630.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 2.16e-11 | 65.1 |
| MS.gene006630.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 2.16e-11 | 65.1 |
| MS.gene006630.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 2.16e-11 | 65.1 |
| MS.gene006630.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 2.16e-11 | 65.1 |
| MS.gene006630.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 2.16e-11 | 65.1 |
| MS.gene006630.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 2.16e-11 | 65.1 |
| MS.gene006630.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 2.16e-11 | 65.1 |
| MS.gene006630.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 2.16e-11 | 65.1 |
| MS.gene006630.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 2.16e-11 | 65.1 |
| MS.gene006630.t1 | AT5G05750 | 36.522 | 115 | 59 | 4 | 4 | 117 | 114 | 215 | 2.32e-11 | 64.3 |
| MS.gene006630.t1 | AT5G49060 | 47.761 | 67 | 33 | 1 | 4 | 70 | 99 | 163 | 2.62e-11 | 64.7 |
| MS.gene006630.t1 | AT5G49060 | 47.761 | 67 | 33 | 1 | 4 | 70 | 99 | 163 | 2.62e-11 | 64.7 |
| MS.gene006630.t1 | AT3G12170 | 46.154 | 65 | 34 | 1 | 6 | 70 | 13 | 76 | 2.67e-11 | 63.5 |
| MS.gene006630.t1 | AT3G12170 | 46.154 | 65 | 34 | 1 | 6 | 70 | 49 | 112 | 4.62e-11 | 63.5 |
| MS.gene006630.t1 | AT3G14200 | 43.750 | 64 | 34 | 1 | 6 | 67 | 14 | 77 | 5.09e-11 | 62.4 |
Find 105 sgRNAs with CRISPR-Local
Find 180 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTTCTTTGTTGGATCTTT+GGG | 0.127445 | 4.4:+31895524 | None:intergenic |
| TCCTTTCTTTGTTGGATCTT+TGG | 0.133264 | 4.4:+31895523 | None:intergenic |
| CTCAAGTTTCCTTTCTTTGT+TGG | 0.230101 | 4.4:+31895515 | None:intergenic |
| GGGAGTGGCATTCCTTCTTT+TGG | 0.244717 | 4.4:+31895545 | None:intergenic |
| AAAGCAATCTATGATCAATA+TGG | 0.252002 | 4.4:-31896961 | MS.gene006630:CDS |
| GATGATATGTTTGGGTCTTT+TGG | 0.252829 | 4.4:-31896715 | MS.gene006630:CDS |
| CTCAACTTGTTCTCAATTGC+AGG | 0.293843 | 4.4:+31896646 | None:intergenic |
| GGCTGTTCGTTGCCCTTCTC+CGG | 0.301114 | 4.4:+31895776 | None:intergenic |
| ATGAACTCAAGAAGGCTTAT+AGG | 0.305596 | 4.4:-31897671 | MS.gene006630:CDS |
| ATATGGGGAAGAAGGTTTAA+AGG | 0.306998 | 4.4:-31896944 | MS.gene006630:CDS |
| GGCATGGGTGGAAGAGGTGG+TGG | 0.326582 | 4.4:-31896778 | MS.gene006630:CDS |
| ATGGGTGGAAGAGGTGGTGG+TGG | 0.346165 | 4.4:-31896775 | MS.gene006630:CDS |
| CCAACCAGGCTTCACGGTTA+TGG | 0.350954 | 4.4:+31895823 | None:intergenic |
| TTTATCAGGGTGCCATTTCA+TGG | 0.357811 | 4.4:+31897641 | None:intergenic |
| TCTCTTGCGGAGGCCTTAAC+TGG | 0.359708 | 4.4:-31895656 | MS.gene006630:CDS |
| GCAAATTTCTGAAGCTTATG+AGG | 0.366911 | 4.4:-31897580 | MS.gene006630:intron |
| TTTGGATTCTCAAGTCCATT+TGG | 0.376774 | 4.4:-31896802 | MS.gene006630:CDS |
| AGATCTGCGGCGGTTACATT+TGG | 0.380440 | 4.4:+31895755 | None:intergenic |
| GGTGGAAGAGGTGGTGGTGG+TGG | 0.384111 | 4.4:-31896772 | MS.gene006630:CDS |
| ATGTTTGGTGATGATATGTT+TGG | 0.387743 | 4.4:-31896724 | MS.gene006630:CDS |
| CTCAAGTCCATTTGGTGGCA+TGG | 0.388182 | 4.4:-31896794 | MS.gene006630:CDS |
| GGGGACAAAGATCACCTTCC+CGG | 0.394265 | 4.4:-31895795 | MS.gene006630:CDS |
| GGAGCTTTCCGAGGTGCAGC+TGG | 0.395400 | 4.4:+31896667 | None:intergenic |
| AAGCAATCTATGATCAATAT+GGG | 0.405655 | 4.4:-31896960 | MS.gene006630:CDS |
| AGGTTCTCTGGTGGGATGTT+TGG | 0.420074 | 4.4:-31896739 | MS.gene006630:CDS |
| ATGAACAGAAAGCAGGAGTT+AGG | 0.421138 | 4.4:-31895454 | MS.gene006630:CDS |
| TGGAACAACCTCCTCATAGT+TGG | 0.427888 | 4.4:+31895565 | None:intergenic |
| ATAGGAAACTTGCCATGAAA+TGG | 0.433703 | 4.4:-31897653 | MS.gene006630:CDS |
| CTTCTTCCAACCAGGCTTCA+CGG | 0.437558 | 4.4:+31895817 | None:intergenic |
| GAGATATGCCTGGATCGTTT+CGG | 0.440294 | 4.4:-31896864 | MS.gene006630:CDS |
| TATGGGGAAGAAGGTTTAAA+GGG | 0.443514 | 4.4:-31896943 | MS.gene006630:CDS |
| CCTCCTCCTGATGCTGGTAG+TGG | 0.444331 | 4.4:-31896913 | MS.gene006630:CDS |
| TTTGGTGGCATGGGTGGAAG+AGG | 0.453320 | 4.4:-31896784 | MS.gene006630:CDS |
| GGAACAACCTCCTCATAGTT+GGG | 0.454108 | 4.4:+31895566 | None:intergenic |
| GCTGTTCGTTGCCCTTCTCC+GGG | 0.457383 | 4.4:+31895777 | None:intergenic |
| TCAAGTCCATTTGGTGGCAT+GGG | 0.457915 | 4.4:-31896793 | MS.gene006630:CDS |
| TGTTTGGTGATGATATGTTT+GGG | 0.458122 | 4.4:-31896723 | MS.gene006630:CDS |
| CCTGATGCTGGTAGTGGAGG+TGG | 0.463449 | 4.4:-31896907 | MS.gene006630:CDS |
| GGATTGAACCGAAACGATCC+AGG | 0.463929 | 4.4:+31896856 | None:intergenic |
| TTTGTTGGATCTTTGGGGAG+TGG | 0.464077 | 4.4:+31895530 | None:intergenic |
| CAATATCTCTTCTACTGGCA+TGG | 0.466117 | 4.4:+31895847 | None:intergenic |
| GGATGGATAACATTGTTGAT+TGG | 0.466142 | 4.4:+31895587 | None:intergenic |
| CTTCCACCCATGCCACCAAA+TGG | 0.471500 | 4.4:+31896787 | None:intergenic |
| TTCGTTGCCCTTCTCCGGGA+AGG | 0.471928 | 4.4:+31895781 | None:intergenic |
| CAAGTTCCTCCTCCTGATGC+TGG | 0.475420 | 4.4:-31896919 | MS.gene006630:CDS |
| GGATTCTCAAGTCCATTTGG+TGG | 0.478580 | 4.4:-31896799 | MS.gene006630:CDS |
| GGTGGCATGGGTGGAAGAGG+TGG | 0.478973 | 4.4:-31896781 | MS.gene006630:CDS |
| AATCTCAGGCCGAGGAAGCC+AGG | 0.481669 | 4.4:+31895426 | None:intergenic |
| CTTCTTGAGTTCATCGTCGT+TGG | 0.485387 | 4.4:+31897680 | None:intergenic |
| CTTTCTTTGTTGGATCTTTG+GGG | 0.485748 | 4.4:+31895525 | None:intergenic |
| CGTGAAGCCTGGTTGGAAGA+AGG | 0.490276 | 4.4:-31895816 | MS.gene006630:CDS |
| GTGCACTGTGTAACCAGTTA+AGG | 0.491645 | 4.4:+31895643 | None:intergenic |
| CCCAAAGATCCAACAAAGAA+AGG | 0.493207 | 4.4:-31895524 | MS.gene006630:CDS |
| GTGGTGGTGGTATGAGATCA+AGG | 0.495448 | 4.4:-31896759 | MS.gene006630:CDS |
| AGACTACTACAAAATCTTGC+AGG | 0.501198 | 4.4:-31897715 | MS.gene006630:CDS |
| AAAGATCACCTTCCCGGAGA+AGG | 0.502158 | 4.4:-31895789 | MS.gene006630:CDS |
| TTTGTCCCCTTCTTCCAACC+AGG | 0.502304 | 4.4:+31895809 | None:intergenic |
| GGTATGAGATCAAGGTTCTC+TGG | 0.506062 | 4.4:-31896751 | MS.gene006630:CDS |
| TATTCCACAGGAGATATGCC+TGG | 0.507701 | 4.4:-31896874 | MS.gene006630:CDS |
| ATGGTCAATATCTCTTCTAC+TGG | 0.511842 | 4.4:+31895842 | None:intergenic |
| CCACCTCCACTACCAGCATC+AGG | 0.519423 | 4.4:+31896907 | None:intergenic |
| TATGATCAATATGGGGAAGA+AGG | 0.519474 | 4.4:-31896952 | MS.gene006630:CDS |
| GTGAAGCCTGGTTGGAAGAA+GGG | 0.524863 | 4.4:-31895815 | MS.gene006630:CDS |
| AGTCCATTTGGTGGCATGGG+TGG | 0.531924 | 4.4:-31896790 | MS.gene006630:CDS |
| CCATAACCGTGAAGCCTGGT+TGG | 0.536317 | 4.4:-31895823 | MS.gene006630:CDS |
| AGAGAAATTGCAGATGCTAG+TGG | 0.539244 | 4.4:-31896571 | MS.gene006630:CDS |
| CACAGTGCACCTCACTACAT+TGG | 0.539341 | 4.4:-31895630 | MS.gene006630:CDS |
| GGAACTAGTTTCTATTCCAC+AGG | 0.539884 | 4.4:-31896886 | MS.gene006630:CDS |
| CAACCTCCTCATAGTTGGGA+TGG | 0.540630 | 4.4:+31895570 | None:intergenic |
| GAGGTGCAGCTGGACTCATA+TGG | 0.540866 | 4.4:+31896677 | None:intergenic |
| GATCGTTTCGGTTCAATCCG+AGG | 0.541844 | 4.4:-31896852 | MS.gene006630:CDS |
| GAGGAGGTTGTTCCAAAAGA+AGG | 0.542649 | 4.4:-31895557 | MS.gene006630:CDS |
| ACTCTTGAGGAGATATATAG+AGG | 0.544484 | 4.4:-31896619 | MS.gene006630:CDS |
| AAGATCACCTTCCCGGAGAA+GGG | 0.545115 | 4.4:-31895788 | MS.gene006630:CDS |
| TTGACCATAACCGTGAAGCC+TGG | 0.557107 | 4.4:-31895827 | MS.gene006630:CDS |
| CCTCCTGATGCTGGTAGTGG+AGG | 0.558602 | 4.4:-31896910 | MS.gene006630:CDS |
| GAGAAATTGCAGATGCTAGT+GGG | 0.567439 | 4.4:-31896570 | MS.gene006630:intron |
| CAAGTTGAGTTGCACTCTTG+AGG | 0.571644 | 4.4:-31896632 | MS.gene006630:CDS |
| TGAAGCCTGGTTGGAAGAAG+GGG | 0.572334 | 4.4:-31895814 | MS.gene006630:CDS |
| AGCAGGAGTTAGGAAACTCC+TGG | 0.572632 | 4.4:-31895444 | MS.gene006630:CDS |
| TGTTATCCATCCCAACTATG+AGG | 0.573529 | 4.4:-31895576 | MS.gene006630:CDS |
| TGTTCATCAGTGAGCCGAGT+AGG | 0.576174 | 4.4:+31895470 | None:intergenic |
| CCACTACCAGCATCAGGAGG+AGG | 0.582606 | 4.4:+31896913 | None:intergenic |
| CTCACTGATGAACAGAAAGC+AGG | 0.583619 | 4.4:-31895461 | MS.gene006630:CDS |
| TGAGATCAAGGTTCTCTGGT+GGG | 0.584925 | 4.4:-31896747 | MS.gene006630:CDS |
| AAAATGTCATCTGCATTCCT+CGG | 0.585119 | 4.4:+31896835 | None:intergenic |
| GTGCACCTCACTACATTGGA+TGG | 0.588922 | 4.4:-31895626 | MS.gene006630:CDS |
| CACAGCGTCTTCAGTCGTGA+AGG | 0.590633 | 4.4:-31895707 | MS.gene006630:CDS |
| CAACGACGATGAACTCAAGA+AGG | 0.592339 | 4.4:-31897679 | MS.gene006630:CDS |
| ATATGTTCAATCTCAGGCCG+AGG | 0.593627 | 4.4:+31895418 | None:intergenic |
| TTAACATTAAGTTTCCTACT+CGG | 0.597995 | 4.4:-31895484 | MS.gene006630:CDS |
| CGATCCAGGCATATCTCCTG+TGG | 0.604540 | 4.4:+31896870 | None:intergenic |
| TAGGAAACTCCTGGCTTCCT+CGG | 0.608981 | 4.4:-31895435 | MS.gene006630:CDS |
| TCAATTGCAGGAGCTTTCCG+AGG | 0.612083 | 4.4:+31896658 | None:intergenic |
| CAACAAAGAAAGGAAACTTG+AGG | 0.615120 | 4.4:-31895514 | MS.gene006630:CDS |
| GACTCAGAAGATATCTCTTG+CGG | 0.628885 | 4.4:-31895669 | MS.gene006630:CDS |
| ATGAGATCAAGGTTCTCTGG+TGG | 0.629186 | 4.4:-31896748 | MS.gene006630:CDS |
| ACAGCGTCTTCAGTCGTGAA+GGG | 0.633069 | 4.4:-31895706 | MS.gene006630:CDS |
| TCACGACTGAAGACGCTGTG+TGG | 0.663022 | 4.4:+31895710 | None:intergenic |
| TTCTACCATCCAATGTAGTG+AGG | 0.667261 | 4.4:+31895621 | None:intergenic |
| AGCAATCTATGATCAATATG+GGG | 0.669335 | 4.4:-31896959 | MS.gene006630:CDS |
| TCAGAAGATATCTCTTGCGG+AGG | 0.676468 | 4.4:-31895666 | MS.gene006630:CDS |
| ATATGAGTCCAGCTGCACCT+CGG | 0.681757 | 4.4:-31896675 | MS.gene006630:CDS |
| TATCCATCCCAACTATGAGG+AGG | 0.689077 | 4.4:-31895573 | MS.gene006630:CDS |
| CCTCCACTACCAGCATCAGG+AGG | 0.710053 | 4.4:+31896910 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTATTTTTATGCATTATA+GGG | - | chr4.4:31896807-31896826 | MS.gene006630:CDS | 10.0% |
| !!! | TAATTATTTTTATGCATTAT+AGG | - | chr4.4:31896806-31896825 | MS.gene006630:CDS | 10.0% |
| !! | AAAACATCTTATTCTAAATA+AGG | + | chr4.4:31897147-31897166 | None:intergenic | 15.0% |
| !! | AAACATCTTATTCTAAATAA+GGG | + | chr4.4:31897146-31897165 | None:intergenic | 15.0% |
| !! | ACTCAATATAAAAAATTATC+TGG | - | chr4.4:31895660-31895679 | MS.gene006630:CDS | 15.0% |
| !! | CTCAATATAAAAAATTATCT+GGG | - | chr4.4:31895661-31895680 | MS.gene006630:CDS | 15.0% |
| !!! | ATTATTTTTATGCATTATAG+GGG | - | chr4.4:31896808-31896827 | MS.gene006630:CDS | 15.0% |
| !!! | GTTATGTATTTTTGTTATAA+GGG | - | chr4.4:31895762-31895781 | MS.gene006630:CDS | 15.0% |
| !!! | TAGTTTTATGTTAGTTATTA+TGG | - | chr4.4:31895843-31895862 | MS.gene006630:CDS | 15.0% |
| !!! | TATAGATTTTTCATTCTATT+TGG | + | chr4.4:31897222-31897241 | None:intergenic | 15.0% |
| !!! | TTCTTTTACATTTTTTTAGT+CGG | - | chr4.4:31896637-31896656 | MS.gene006630:CDS | 15.0% |
| !! | AATACATACATGGTTAATAT+TGG | + | chr4.4:31897261-31897280 | None:intergenic | 20.0% |
| !! | GACAAATTTCATATATTGTA+AGG | - | chr4.4:31896781-31896800 | MS.gene006630:CDS | 20.0% |
| !! | TTGAAACAAAGCAAAAAATT+TGG | + | chr4.4:31895793-31895812 | None:intergenic | 20.0% |
| !!! | ATGAAGATTTTATATGCTTT+AGG | + | chr4.4:31896693-31896712 | None:intergenic | 20.0% |
| !!! | ATTGATGGTTTATTCTTTAA+TGG | - | chr4.4:31896866-31896885 | MS.gene006630:CDS | 20.0% |
| !!! | GGTTATGTATTTTTGTTATA+AGG | - | chr4.4:31895761-31895780 | MS.gene006630:CDS | 20.0% |
| !!! | TGAAGATTTTATATGCTTTA+GGG | + | chr4.4:31896692-31896711 | None:intergenic | 20.0% |
| !!! | TTATTTTTATGCATTATAGG+GGG | - | chr4.4:31896809-31896828 | MS.gene006630:CDS | 20.0% |
| !!! | TTCTATCATAAACCATATTT+TGG | + | chr4.4:31895930-31895949 | None:intergenic | 20.0% |
| !!! | TTTTTGCTTTGTTTCAAATT+AGG | - | chr4.4:31895796-31895815 | MS.gene006630:CDS | 20.0% |
| ! | AAAAAGATGTAGATAAGTAG+AGG | + | chr4.4:31897020-31897039 | None:intergenic | 25.0% |
| ! | AAAGCAATCTATGATCAATA+TGG | - | chr4.4:31896192-31896211 | MS.gene006630:intron | 25.0% |
| ! | AAGCAATCTATGATCAATAT+GGG | - | chr4.4:31896193-31896212 | MS.gene006630:intron | 25.0% |
| ! | AAGGAAGATTAATACATACA+TGG | + | chr4.4:31897271-31897290 | None:intergenic | 25.0% |
| ! | ACAAACTAAACACTAACATT+TGG | + | chr4.4:31897071-31897090 | None:intergenic | 25.0% |
| ! | TTAACATTAAGTTTCCTACT+CGG | - | chr4.4:31897669-31897688 | MS.gene006630:CDS | 25.0% |
| !! | ATGTATGGATGTTTTTCATA+AGG | - | chr4.4:31896037-31896056 | MS.gene006630:intron | 25.0% |
| !! | TGATTTATGGACTATATTGA+TGG | - | chr4.4:31896851-31896870 | MS.gene006630:CDS | 25.0% |
| !! | TGTATGGATGTTTTTCATAA+GGG | - | chr4.4:31896038-31896057 | MS.gene006630:intron | 25.0% |
| !! | TTCAACAAACTTTTGTATGT+TGG | - | chr4.4:31895740-31895759 | MS.gene006630:CDS | 25.0% |
| !!! | AATGTTAGTGTTTAGTTTGT+CGG | - | chr4.4:31897071-31897090 | MS.gene006630:intron | 25.0% |
| !!! | AGATGTTTTTGTTTATGCAA+TGG | - | chr4.4:31897158-31897177 | MS.gene006630:intron | 25.0% |
| !!! | TATTTTTATGCATTATAGGG+GGG | - | chr4.4:31896810-31896829 | MS.gene006630:CDS | 25.0% |
| AAACATGACATTGTCAAAGT+AGG | - | chr4.4:31896919-31896938 | MS.gene006630:CDS | 30.0% | |
| AAACTTTATCCAAGTAAGCA+TGG | + | chr4.4:31895988-31896007 | None:intergenic | 30.0% | |
| AGCAATCTATGATCAATATG+GGG | - | chr4.4:31896194-31896213 | MS.gene006630:intron | 30.0% | |
| ATGCTTACTTGGATAAAGTT+TGG | - | chr4.4:31895987-31896006 | MS.gene006630:intron | 30.0% | |
| GAGATTAGAGATTAATGAGT+TGG | - | chr4.4:31895903-31895922 | MS.gene006630:intron | 30.0% | |
| GATGACAAAAATAAGATCTG+CGG | + | chr4.4:31897414-31897433 | None:intergenic | 30.0% | |
| TGCTTGGTTGAAGTTTAATT+TGG | - | chr4.4:31896665-31896684 | MS.gene006630:CDS | 30.0% | |
| TTACTTTGTGTTGTCAATTG+TGG | - | chr4.4:31896139-31896158 | MS.gene006630:intron | 30.0% | |
| TTGTCAATTGTGGTTATTGA+AGG | - | chr4.4:31896149-31896168 | MS.gene006630:intron | 30.0% | |
| ! | CTTTGACAATGTCATGTTTT+AGG | + | chr4.4:31896918-31896937 | None:intergenic | 30.0% |
| ! | GACATTTTTGCAGAGTTTTT+TGG | - | chr4.4:31896333-31896352 | MS.gene006630:intron | 30.0% |
| ! | TAATGAGTTGGACCAAAATA+TGG | - | chr4.4:31895915-31895934 | MS.gene006630:intron | 30.0% |
| ! | TCATAGATTGCTTTCTTTTC+AGG | + | chr4.4:31896186-31896205 | None:intergenic | 30.0% |
| !! | ATGTTTGGTGATGATATGTT+TGG | - | chr4.4:31896429-31896448 | MS.gene006630:intron | 30.0% |
| !! | TGATGTCTTATTTGACTGAT+GGG | - | chr4.4:31896988-31897007 | MS.gene006630:intron | 30.0% |
| !! | TGTTGGTTGGATTTTTATCA+GGG | + | chr4.4:31895528-31895547 | None:intergenic | 30.0% |
| !! | TGTTTGGTGATGATATGTTT+GGG | - | chr4.4:31896430-31896449 | MS.gene006630:intron | 30.0% |
| !! | TTGATGTCTTATTTGACTGA+TGG | - | chr4.4:31896987-31897006 | MS.gene006630:intron | 30.0% |
| !! | TTGTTGGTTGGATTTTTATC+AGG | + | chr4.4:31895529-31895548 | None:intergenic | 30.0% |
| !!! | TTATTTTTGTCATCGACGAA+AGG | - | chr4.4:31897420-31897439 | MS.gene006630:intron | 30.0% |
| AAAATGTCATCTGCATTCCT+CGG | + | chr4.4:31896321-31896340 | None:intergenic | 35.0% | |
| ACTCTTGAGGAGATATATAG+AGG | - | chr4.4:31896534-31896553 | MS.gene006630:intron | 35.0% | |
| AGACTACTACAAAATCTTGC+AGG | - | chr4.4:31895438-31895457 | MS.gene006630:CDS | 35.0% | |
| ATAGGAAACTTGCCATGAAA+TGG | - | chr4.4:31895500-31895519 | MS.gene006630:CDS | 35.0% | |
| ATATGGGGAAGAAGGTTTAA+AGG | - | chr4.4:31896209-31896228 | MS.gene006630:intron | 35.0% | |
| ATGAACTCAAGAAGGCTTAT+AGG | - | chr4.4:31895482-31895501 | MS.gene006630:CDS | 35.0% | |
| ATGGTCAATATCTCTTCTAC+TGG | + | chr4.4:31897314-31897333 | None:intergenic | 35.0% | |
| CAACAAAGAAAGGAAACTTG+AGG | - | chr4.4:31897639-31897658 | MS.gene006630:CDS | 35.0% | |
| CCTTTCTTTGTTGGATCTTT+GGG | + | chr4.4:31897632-31897651 | None:intergenic | 35.0% | |
| CTCAAGTTTCCTTTCTTTGT+TGG | + | chr4.4:31897641-31897660 | None:intergenic | 35.0% | |
| CTTTCTTTGTTGGATCTTTG+GGG | + | chr4.4:31897631-31897650 | None:intergenic | 35.0% | |
| GGATGGATAACATTGTTGAT+TGG | + | chr4.4:31897569-31897588 | None:intergenic | 35.0% | |
| TATGATCAATATGGGGAAGA+AGG | - | chr4.4:31896201-31896220 | MS.gene006630:intron | 35.0% | |
| TATGGGGAAGAAGGTTTAAA+GGG | - | chr4.4:31896210-31896229 | MS.gene006630:intron | 35.0% | |
| TCCTTTCTTTGTTGGATCTT+TGG | + | chr4.4:31897633-31897652 | None:intergenic | 35.0% | |
| TTTATCCAAGTAAGCATGGT+CGG | + | chr4.4:31895984-31896003 | None:intergenic | 35.0% | |
| TTTATGCAATGGCTAATGCA+TGG | - | chr4.4:31897169-31897188 | MS.gene006630:intron | 35.0% | |
| TTTGGATTCTCAAGTCCATT+TGG | - | chr4.4:31896351-31896370 | MS.gene006630:intron | 35.0% | |
| ! | GATGATATGTTTGGGTCTTT+TGG | - | chr4.4:31896438-31896457 | MS.gene006630:intron | 35.0% |
| ! | TTGCTGTTGCTATTGATGTA+TGG | - | chr4.4:31896022-31896041 | MS.gene006630:intron | 35.0% |
| ! | TTGGAGAGTGTGATGATTTA+TGG | - | chr4.4:31896838-31896857 | MS.gene006630:CDS | 35.0% |
| !! | GCAAATTTCTGAAGCTTATG+AGG | - | chr4.4:31895573-31895592 | MS.gene006630:CDS | 35.0% |
| !! | GGGAGAATTTGTTAGCAAAA+AGG | - | chr4.4:31897098-31897117 | MS.gene006630:intron | 35.0% |
| !! | TGTCATGTTTTAGGCTCATA+CGG | + | chr4.4:31896909-31896928 | None:intergenic | 35.0% |
| !! | TTTTTAGTCGGTTTTGTGCT+TGG | - | chr4.4:31896649-31896668 | MS.gene006630:CDS | 35.0% |
| !!! | AGCTTCAGCATCTTTTTTGT+TGG | + | chr4.4:31895545-31895564 | None:intergenic | 35.0% |
| !!! | TCAGCATCTTTTTTGTTGGT+TGG | + | chr4.4:31895541-31895560 | None:intergenic | 35.0% |
| AATAAGGGCAAAGACATTGC+AGG | + | chr4.4:31897131-31897150 | None:intergenic | 40.0% | |
| ACCAAATGAGTAGCAGACAT+TGG | + | chr4.4:31896961-31896980 | None:intergenic | 40.0% | |
| AGAGAAATTGCAGATGCTAG+TGG | - | chr4.4:31896582-31896601 | MS.gene006630:CDS | 40.0% | |
| ATGAACAGAAAGCAGGAGTT+AGG | - | chr4.4:31897699-31897718 | MS.gene006630:CDS | 40.0% | |
| CAATATCTCTTCTACTGGCA+TGG | + | chr4.4:31897309-31897328 | None:intergenic | 40.0% | |
| CCAAATGAGTAGCAGACATT+GGG | + | chr4.4:31896960-31896979 | None:intergenic | 40.0% | |
| CCCAAAGATCCAACAAAGAA+AGG | - | chr4.4:31897629-31897648 | MS.gene006630:CDS | 40.0% | |
| GACAAAAATAAGATCTGCGG+CGG | + | chr4.4:31897411-31897430 | None:intergenic | 40.0% | |
| GACTCAGAAGATATCTCTTG+CGG | - | chr4.4:31897484-31897503 | MS.gene006630:intron | 40.0% | |
| GAGAAATTGCAGATGCTAGT+GGG | - | chr4.4:31896583-31896602 | MS.gene006630:CDS | 40.0% | |
| GCATTATAGGGGGGTTAAAT+TGG | - | chr4.4:31896819-31896838 | MS.gene006630:CDS | 40.0% | |
| TGTTATCCATCCCAACTATG+AGG | - | chr4.4:31897577-31897596 | MS.gene006630:intron | 40.0% | |
| TTCTACCATCCAATGTAGTG+AGG | + | chr4.4:31897535-31897554 | None:intergenic | 40.0% | |
| ! | CTCAACTTGTTCTCAATTGC+AGG | + | chr4.4:31896510-31896529 | None:intergenic | 40.0% |
| ! | GGAACTAGTTTCTATTCCAC+AGG | - | chr4.4:31896267-31896286 | MS.gene006630:intron | 40.0% |
| !! | ATGGTTTTGCTGCACATACA+AGG | + | chr4.4:31897290-31897309 | None:intergenic | 40.0% |
| !! | ATGTTTGGGTCTTTTGGAGA+AGG | - | chr4.4:31896444-31896463 | MS.gene006630:intron | 40.0% |
| !! | GTTAGTGTTTAGTTTGTCGG+TGG | - | chr4.4:31897074-31897093 | MS.gene006630:intron | 40.0% |
| !! | TGTCTTATTTGACTGATGGG+TGG | - | chr4.4:31896991-31897010 | MS.gene006630:intron | 40.0% |
| !! | TTTATCAGGGTGCCATTTCA+TGG | + | chr4.4:31895515-31895534 | None:intergenic | 40.0% |
| AATGAGTAGCAGACATTGGG+TGG | + | chr4.4:31896957-31896976 | None:intergenic | 45.0% | |
| ATGAGATCAAGGTTCTCTGG+TGG | - | chr4.4:31896405-31896424 | MS.gene006630:intron | 45.0% | |
| CAACGACGATGAACTCAAGA+AGG | - | chr4.4:31895474-31895493 | MS.gene006630:CDS | 45.0% | |
| CCCAATGTCTGCTACTCATT+TGG | - | chr4.4:31896957-31896976 | MS.gene006630:CDS | 45.0% | |
| CTCACTGATGAACAGAAAGC+AGG | - | chr4.4:31897692-31897711 | MS.gene006630:CDS | 45.0% | |
| CTTCTTGAGTTCATCGTCGT+TGG | + | chr4.4:31895476-31895495 | None:intergenic | 45.0% | |
| GAGATATGCCTGGATCGTTT+CGG | - | chr4.4:31896289-31896308 | MS.gene006630:intron | 45.0% | |
| GAGGAGGTTGTTCCAAAAGA+AGG | - | chr4.4:31897596-31897615 | MS.gene006630:CDS | 45.0% | |
| GGAACAACCTCCTCATAGTT+GGG | + | chr4.4:31897590-31897609 | None:intergenic | 45.0% | |
| GGATTCTCAAGTCCATTTGG+TGG | - | chr4.4:31896354-31896373 | MS.gene006630:intron | 45.0% | |
| GGCTCATACGGTTTCTTCTT+CGG | + | chr4.4:31896897-31896916 | None:intergenic | 45.0% | |
| GGTATGAGATCAAGGTTCTC+TGG | - | chr4.4:31896402-31896421 | MS.gene006630:intron | 45.0% | |
| GTGCACTGTGTAACCAGTTA+AGG | + | chr4.4:31897513-31897532 | None:intergenic | 45.0% | |
| TATCCATCCCAACTATGAGG+AGG | - | chr4.4:31897580-31897599 | MS.gene006630:intron | 45.0% | |
| TATTCCACAGGAGATATGCC+TGG | - | chr4.4:31896279-31896298 | MS.gene006630:intron | 45.0% | |
| TCAGAAGATATCTCTTGCGG+AGG | - | chr4.4:31897487-31897506 | MS.gene006630:intron | 45.0% | |
| TGAGATCAAGGTTCTCTGGT+GGG | - | chr4.4:31896406-31896425 | MS.gene006630:intron | 45.0% | |
| TGGAACAACCTCCTCATAGT+TGG | + | chr4.4:31897591-31897610 | None:intergenic | 45.0% | |
| ! | CAAGTTGAGTTGCACTCTTG+AGG | - | chr4.4:31896521-31896540 | MS.gene006630:intron | 45.0% |
| ! | TCAAGTCCATTTGGTGGCAT+GGG | - | chr4.4:31896360-31896379 | MS.gene006630:intron | 45.0% |
| ! | TTTGTTGGATCTTTGGGGAG+TGG | + | chr4.4:31897626-31897645 | None:intergenic | 45.0% |
| !! | AGTGTTTAGTTTGTCGGTGG+AGG | - | chr4.4:31897077-31897096 | MS.gene006630:intron | 45.0% |
| !! | GTGTTTAGTTTGTCGGTGGA+GGG | - | chr4.4:31897078-31897097 | MS.gene006630:intron | 45.0% |
| !! | TTTGGGTCTTTTGGAGAAGG+AGG | - | chr4.4:31896447-31896466 | MS.gene006630:intron | 45.0% |
| !!! | ATCAAATAATTTTTTTTATT+TGG | - | chr4.4:31896109-31896128 | MS.gene006630:intron | 5.0% |
| !!! | TCAAATAATTTTTTTTATTT+GGG | - | chr4.4:31896110-31896129 | MS.gene006630:intron | 5.0% |
| AAAGATCACCTTCCCGGAGA+AGG | - | chr4.4:31897364-31897383 | MS.gene006630:intron | 50.0% | |
| AAGATCACCTTCCCGGAGAA+GGG | - | chr4.4:31897365-31897384 | MS.gene006630:intron | 50.0% | |
| ACAGCGTCTTCAGTCGTGAA+GGG | - | chr4.4:31897447-31897466 | MS.gene006630:intron | 50.0% | |
| AGATCTGCGGCGGTTACATT+TGG | + | chr4.4:31897401-31897420 | None:intergenic | 50.0% | |
| AGCAGGAGTTAGGAAACTCC+TGG | - | chr4.4:31897709-31897728 | MS.gene006630:CDS | 50.0% | |
| AGGTTCTCTGGTGGGATGTT+TGG | - | chr4.4:31896414-31896433 | MS.gene006630:intron | 50.0% | |
| ATATGAGTCCAGCTGCACCT+CGG | - | chr4.4:31896478-31896497 | MS.gene006630:intron | 50.0% | |
| CAACCTCCTCATAGTTGGGA+TGG | + | chr4.4:31897586-31897605 | None:intergenic | 50.0% | |
| CACAGTGCACCTCACTACAT+TGG | - | chr4.4:31897523-31897542 | MS.gene006630:intron | 50.0% | |
| CTTCTTCCAACCAGGCTTCA+CGG | + | chr4.4:31897339-31897358 | None:intergenic | 50.0% | |
| GATCGTTTCGGTTCAATCCG+AGG | - | chr4.4:31896301-31896320 | MS.gene006630:intron | 50.0% | |
| GGATTGAACCGAAACGATCC+AGG | + | chr4.4:31896300-31896319 | None:intergenic | 50.0% | |
| GTGAAGCCTGGTTGGAAGAA+GGG | - | chr4.4:31897338-31897357 | MS.gene006630:intron | 50.0% | |
| GTGCACCTCACTACATTGGA+TGG | - | chr4.4:31897527-31897546 | MS.gene006630:intron | 50.0% | |
| TAGGAAACTCCTGGCTTCCT+CGG | - | chr4.4:31897718-31897737 | MS.gene006630:CDS | 50.0% | |
| TCAATTGCAGGAGCTTTCCG+AGG | + | chr4.4:31896498-31896517 | None:intergenic | 50.0% | |
| TGAAGCCTGGTTGGAAGAAG+GGG | - | chr4.4:31897339-31897358 | MS.gene006630:intron | 50.0% | |
| TGTTCATCAGTGAGCCGAGT+AGG | + | chr4.4:31897686-31897705 | None:intergenic | 50.0% | |
| TTGACCATAACCGTGAAGCC+TGG | - | chr4.4:31897326-31897345 | MS.gene006630:intron | 50.0% | |
| TTTGTCCCCTTCTTCCAACC+AGG | + | chr4.4:31897347-31897366 | None:intergenic | 50.0% | |
| ! | CTCAAGTCCATTTGGTGGCA+TGG | - | chr4.4:31896359-31896378 | MS.gene006630:intron | 50.0% |
| ! | GGGAGTGGCATTCCTTCTTT+TGG | + | chr4.4:31897611-31897630 | None:intergenic | 50.0% |
| !! | GTGGTGGTGGTATGAGATCA+AGG | - | chr4.4:31896394-31896413 | MS.gene006630:intron | 50.0% |
| AGCATGGTCGGTCAGCTACA+TGG | + | chr4.4:31895972-31895991 | None:intergenic | 55.0% | |
| CAAGTTCCTCCTCCTGATGC+TGG | - | chr4.4:31896234-31896253 | MS.gene006630:intron | 55.0% | |
| CACAGCGTCTTCAGTCGTGA+AGG | - | chr4.4:31897446-31897465 | MS.gene006630:intron | 55.0% | |
| CCAACCAGGCTTCACGGTTA+TGG | + | chr4.4:31897333-31897352 | None:intergenic | 55.0% | |
| CCATAACCGTGAAGCCTGGT+TGG | - | chr4.4:31897330-31897349 | MS.gene006630:intron | 55.0% | |
| CGATCCAGGCATATCTCCTG+TGG | + | chr4.4:31896286-31896305 | None:intergenic | 55.0% | |
| CGTGAAGCCTGGTTGGAAGA+AGG | - | chr4.4:31897337-31897356 | MS.gene006630:intron | 55.0% | |
| CTTCCACCCATGCCACCAAA+TGG | + | chr4.4:31896369-31896388 | None:intergenic | 55.0% | |
| GAGGTGCAGCTGGACTCATA+TGG | + | chr4.4:31896479-31896498 | None:intergenic | 55.0% | |
| GCTGACCGACCATGCTTACT+TGG | - | chr4.4:31895976-31895995 | MS.gene006630:intron | 55.0% | |
| GGGGACAAAGATCACCTTCC+CGG | - | chr4.4:31897358-31897377 | MS.gene006630:intron | 55.0% | |
| TCACGACTGAAGACGCTGTG+TGG | + | chr4.4:31897446-31897465 | None:intergenic | 55.0% | |
| TCTCTTGCGGAGGCCTTAAC+TGG | - | chr4.4:31897497-31897516 | MS.gene006630:intron | 55.0% | |
| ! | AGTCCATTTGGTGGCATGGG+TGG | - | chr4.4:31896363-31896382 | MS.gene006630:intron | 55.0% |
| ! | TTTGGTGGCATGGGTGGAAG+AGG | - | chr4.4:31896369-31896388 | MS.gene006630:intron | 55.0% |
| !! | GGGTCTTTTGGAGAAGGAGG+AGG | - | chr4.4:31896450-31896469 | MS.gene006630:intron | 55.0% |
| CCACCTCCACTACCAGCATC+AGG | + | chr4.4:31896249-31896268 | None:intergenic | 60.0% | |
| CCACTACCAGCATCAGGAGG+AGG | + | chr4.4:31896243-31896262 | None:intergenic | 60.0% | |
| CCTCCACTACCAGCATCAGG+AGG | + | chr4.4:31896246-31896265 | None:intergenic | 60.0% | |
| CCTCCTCCTGATGCTGGTAG+TGG | - | chr4.4:31896240-31896259 | MS.gene006630:intron | 60.0% | |
| GCTGTTCGTTGCCCTTCTCC+GGG | + | chr4.4:31897379-31897398 | None:intergenic | 60.0% | |
| GGCTGTTCGTTGCCCTTCTC+CGG | + | chr4.4:31897380-31897399 | None:intergenic | 60.0% | |
| TTCGTTGCCCTTCTCCGGGA+AGG | + | chr4.4:31897375-31897394 | None:intergenic | 60.0% | |
| ! | ATGGGTGGAAGAGGTGGTGG+TGG | - | chr4.4:31896378-31896397 | MS.gene006630:intron | 60.0% |
| !! | CCTCCTGATGCTGGTAGTGG+AGG | - | chr4.4:31896243-31896262 | MS.gene006630:intron | 60.0% |
| !! | CCTGATGCTGGTAGTGGAGG+TGG | - | chr4.4:31896246-31896265 | MS.gene006630:intron | 60.0% |
| GGAGCTTTCCGAGGTGCAGC+TGG | + | chr4.4:31896489-31896508 | None:intergenic | 65.0% | |
| GGCATGGGTGGAAGAGGTGG+TGG | - | chr4.4:31896375-31896394 | MS.gene006630:intron | 65.0% | |
| GGTGGCATGGGTGGAAGAGG+TGG | - | chr4.4:31896372-31896391 | MS.gene006630:intron | 65.0% | |
| !! | GGTGGAAGAGGTGGTGGTGG+TGG | - | chr4.4:31896381-31896400 | MS.gene006630:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 31895430 | 31897745 | 31895430 | ID=MS.gene006630 |
| chr4.4 | mRNA | 31895430 | 31897745 | 31895430 | ID=MS.gene006630.t1;Parent=MS.gene006630 |
| chr4.4 | exon | 31897581 | 31897745 | 31897581 | ID=MS.gene006630.t1.exon1;Parent=MS.gene006630.t1 |
| chr4.4 | CDS | 31897581 | 31897745 | 31897581 | ID=cds.MS.gene006630.t1;Parent=MS.gene006630.t1 |
| chr4.4 | exon | 31896571 | 31897004 | 31896571 | ID=MS.gene006630.t1.exon2;Parent=MS.gene006630.t1 |
| chr4.4 | CDS | 31896571 | 31897004 | 31896571 | ID=cds.MS.gene006630.t1;Parent=MS.gene006630.t1 |
| chr4.4 | exon | 31895430 | 31895874 | 31895430 | ID=MS.gene006630.t1.exon3;Parent=MS.gene006630.t1 |
| chr4.4 | CDS | 31895430 | 31895874 | 31895430 | ID=cds.MS.gene006630.t1;Parent=MS.gene006630.t1 |
| Gene Sequence |
| Protein sequence |
