Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045555.t1 | XP_003607513.1 | 98.8 | 347 | 4 | 0 | 1 | 347 | 1 | 347 | 6.60E-189 | 669.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045555.t1 | Q9UDY4 | 41.9 | 360 | 172 | 8 | 1 | 346 | 1 | 337 | 4.5e-69 | 263.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045555.t1 | B7FHS3 | 98.8 | 347 | 4 | 0 | 1 | 347 | 1 | 347 | 4.7e-189 | 669.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene045555 | MS.gene84339 | PPI |
| MS.gene045555 | MS.gene35396 | PPI |
| MS.gene045555 | MS.gene002499 | PPI |
| MS.gene045555 | MS.gene50013 | PPI |
| MS.gene045555 | MS.gene01472 | PPI |
| MS.gene006630 | MS.gene045555 | PPI |
| MS.gene045555 | MS.gene75767 | PPI |
| MS.gene045555 | MS.gene047354 | PPI |
| MS.gene045555 | MS.gene037465 | PPI |
| MS.gene045555 | MS.gene066761 | PPI |
| MS.gene045555 | MS.gene014782 | PPI |
| MS.gene045555 | MS.gene006630 | PPI |
| MS.gene045555 | MS.gene034468 | PPI |
| MS.gene045555 | MS.gene43051 | PPI |
| MS.gene045555 | MS.gene01038 | PPI |
| MS.gene045555 | MS.gene77100 | PPI |
| MS.gene045555 | MS.gene072961 | PPI |
| MS.gene045555 | MS.gene050322 | PPI |
| MS.gene66767 | MS.gene045555 | PPI |
| MS.gene045555 | MS.gene50004 | PPI |
| MS.gene045555 | MS.gene031675 | PPI |
| MS.gene045555 | MS.gene007227 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045555.t1 | MTR_4g078850 | 98.847 | 347 | 4 | 0 | 1 | 347 | 1 | 347 | 0.0 | 703 |
| MS.gene045555.t1 | MTR_2g014470 | 78.613 | 346 | 65 | 3 | 1 | 344 | 1 | 339 | 0.0 | 535 |
| MS.gene045555.t1 | MTR_2g090705 | 69.516 | 351 | 84 | 5 | 1 | 344 | 1 | 335 | 5.28e-171 | 479 |
| MS.gene045555.t1 | MTR_4g015840 | 66.571 | 350 | 104 | 3 | 1 | 346 | 1 | 341 | 1.44e-166 | 468 |
| MS.gene045555.t1 | MTR_2g014480 | 64.655 | 348 | 103 | 6 | 1 | 337 | 1 | 339 | 1.74e-146 | 417 |
| MS.gene045555.t1 | MTR_3g108020 | 55.202 | 346 | 131 | 6 | 1 | 343 | 1 | 325 | 2.21e-125 | 363 |
| MS.gene045555.t1 | MTR_4g015840 | 64.032 | 253 | 82 | 2 | 98 | 346 | 17 | 264 | 8.50e-111 | 323 |
| MS.gene045555.t1 | MTR_5g037880 | 53.073 | 179 | 84 | 0 | 169 | 347 | 100 | 278 | 9.56e-66 | 209 |
| MS.gene045555.t1 | MTR_5g037880 | 47.368 | 95 | 36 | 2 | 4 | 91 | 5 | 92 | 3.69e-19 | 86.7 |
| MS.gene045555.t1 | MTR_7g109340 | 35.043 | 351 | 182 | 8 | 5 | 343 | 27 | 343 | 5.92e-53 | 178 |
| MS.gene045555.t1 | MTR_3g437840 | 49.689 | 161 | 81 | 0 | 184 | 344 | 2 | 162 | 1.92e-52 | 171 |
| MS.gene045555.t1 | MTR_3g088140 | 43.716 | 183 | 102 | 1 | 166 | 347 | 175 | 357 | 2.37e-49 | 169 |
| MS.gene045555.t1 | MTR_8g006430 | 32.979 | 376 | 187 | 11 | 5 | 343 | 15 | 362 | 1.19e-47 | 166 |
| MS.gene045555.t1 | MTR_2g006890 | 44.022 | 184 | 102 | 1 | 165 | 347 | 196 | 379 | 3.25e-45 | 159 |
| MS.gene045555.t1 | MTR_3g437360 | 45.882 | 170 | 87 | 4 | 161 | 327 | 171 | 338 | 5.28e-42 | 149 |
| MS.gene045555.t1 | MTR_3g437360 | 54.430 | 79 | 35 | 1 | 3 | 80 | 4 | 82 | 1.59e-19 | 88.6 |
| MS.gene045555.t1 | MTR_3g437850 | 35.149 | 202 | 92 | 5 | 3 | 200 | 1 | 167 | 3.09e-30 | 113 |
| MS.gene045555.t1 | MTR_2g104030 | 28.307 | 378 | 211 | 11 | 4 | 344 | 70 | 424 | 2.60e-26 | 109 |
| MS.gene045555.t1 | MTR_2g087660 | 37.241 | 145 | 89 | 1 | 201 | 343 | 214 | 358 | 3.18e-26 | 108 |
| MS.gene045555.t1 | MTR_5g065160 | 28.080 | 349 | 222 | 11 | 4 | 337 | 82 | 416 | 1.36e-25 | 107 |
| MS.gene045555.t1 | MTR_5g065160 | 28.080 | 349 | 222 | 11 | 4 | 337 | 83 | 417 | 1.65e-25 | 106 |
| MS.gene045555.t1 | MTR_5g065160 | 28.080 | 349 | 222 | 11 | 4 | 337 | 76 | 410 | 2.29e-25 | 106 |
| MS.gene045555.t1 | MTR_5g065160 | 28.080 | 349 | 222 | 11 | 4 | 337 | 83 | 417 | 2.59e-25 | 106 |
| MS.gene045555.t1 | MTR_4g050420 | 36.552 | 145 | 90 | 1 | 201 | 343 | 212 | 356 | 2.80e-25 | 105 |
| MS.gene045555.t1 | MTR_4g050420 | 60.563 | 71 | 23 | 2 | 5 | 75 | 14 | 79 | 2.88e-11 | 64.7 |
| MS.gene045555.t1 | MTR_3g027580 | 28.367 | 349 | 215 | 12 | 4 | 336 | 89 | 418 | 8.02e-21 | 93.2 |
| MS.gene045555.t1 | MTR_3g087030 | 62.162 | 74 | 22 | 2 | 4 | 75 | 82 | 151 | 6.98e-20 | 90.5 |
| MS.gene045555.t1 | MTR_7g101070 | 58.462 | 65 | 27 | 0 | 4 | 68 | 358 | 422 | 8.38e-20 | 90.5 |
| MS.gene045555.t1 | MTR_4g023470 | 27.273 | 352 | 216 | 12 | 5 | 336 | 87 | 418 | 2.35e-19 | 89.0 |
| MS.gene045555.t1 | MTR_5g065860 | 54.688 | 64 | 28 | 1 | 4 | 67 | 48 | 110 | 1.03e-16 | 76.6 |
| MS.gene045555.t1 | MTR_7g112360 | 50.000 | 66 | 30 | 1 | 5 | 67 | 17 | 82 | 1.14e-16 | 77.0 |
| MS.gene045555.t1 | MTR_7g112360 | 50.000 | 66 | 30 | 1 | 5 | 67 | 17 | 82 | 1.60e-16 | 75.1 |
| MS.gene045555.t1 | MTR_5g012530 | 48.649 | 74 | 36 | 1 | 4 | 75 | 12 | 85 | 2.20e-16 | 80.5 |
| MS.gene045555.t1 | MTR_2g087660 | 38.776 | 98 | 58 | 1 | 201 | 296 | 214 | 311 | 3.12e-16 | 79.0 |
| MS.gene045555.t1 | MTR_7g069480 | 51.429 | 70 | 32 | 1 | 3 | 72 | 26 | 93 | 3.39e-15 | 77.0 |
| MS.gene045555.t1 | MTR_1g110310 | 50.704 | 71 | 34 | 1 | 4 | 74 | 16 | 85 | 8.95e-15 | 75.1 |
| MS.gene045555.t1 | MTR_8g022310 | 46.377 | 69 | 32 | 1 | 4 | 67 | 10 | 78 | 1.49e-14 | 72.0 |
| MS.gene045555.t1 | MTR_8g022310 | 46.377 | 69 | 32 | 1 | 4 | 67 | 10 | 78 | 2.42e-14 | 71.6 |
| MS.gene045555.t1 | MTR_2g436560 | 38.583 | 127 | 61 | 4 | 4 | 124 | 104 | 219 | 2.43e-14 | 73.6 |
| MS.gene045555.t1 | MTR_8g022310 | 46.377 | 69 | 32 | 1 | 4 | 67 | 10 | 78 | 2.54e-14 | 71.2 |
| MS.gene045555.t1 | MTR_4g085070 | 50.000 | 60 | 27 | 1 | 11 | 67 | 19 | 78 | 2.68e-14 | 70.1 |
| MS.gene045555.t1 | MTR_8g022310 | 46.377 | 69 | 32 | 1 | 4 | 67 | 10 | 78 | 3.27e-14 | 71.6 |
| MS.gene045555.t1 | MTR_6g027110 | 44.000 | 75 | 38 | 1 | 3 | 73 | 1 | 75 | 6.52e-14 | 68.6 |
| MS.gene045555.t1 | MTR_6g027030 | 44.000 | 75 | 38 | 1 | 3 | 73 | 1 | 75 | 1.91e-13 | 69.3 |
| MS.gene045555.t1 | MTR_1g029460 | 44.444 | 72 | 39 | 1 | 3 | 74 | 5 | 75 | 3.53e-13 | 70.5 |
| MS.gene045555.t1 | MTR_3g100330 | 49.254 | 67 | 31 | 2 | 3 | 68 | 68 | 132 | 4.52e-13 | 68.2 |
| MS.gene045555.t1 | MTR_6g026940 | 44.928 | 69 | 34 | 1 | 3 | 67 | 1 | 69 | 5.80e-13 | 67.0 |
| MS.gene045555.t1 | MTR_5g035770 | 46.575 | 73 | 38 | 1 | 4 | 76 | 25 | 96 | 5.94e-13 | 69.7 |
| MS.gene045555.t1 | MTR_1g052110 | 49.231 | 65 | 32 | 1 | 6 | 70 | 40 | 103 | 6.71e-13 | 68.6 |
| MS.gene045555.t1 | MTR_6g471050 | 25.706 | 354 | 203 | 16 | 30 | 347 | 7 | 336 | 1.48e-12 | 68.6 |
| MS.gene045555.t1 | MTR_7g092380 | 47.692 | 65 | 33 | 1 | 6 | 70 | 24 | 87 | 3.35e-12 | 66.6 |
| MS.gene045555.t1 | MTR_1g087580 | 35.659 | 129 | 76 | 4 | 222 | 345 | 59 | 185 | 2.76e-11 | 62.4 |
| MS.gene045555.t1 | MTR_3g099170 | 35.714 | 98 | 57 | 3 | 3 | 97 | 79 | 173 | 4.15e-11 | 64.7 |
| MS.gene045555.t1 | MTR_5g004570 | 45.070 | 71 | 38 | 1 | 4 | 74 | 6 | 75 | 7.75e-11 | 62.0 |
| MS.gene045555.t1 | MTR_7g016790 | 57.692 | 52 | 22 | 0 | 159 | 210 | 1 | 52 | 8.58e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045555.t1 | AT2G20560 | 76.879 | 346 | 67 | 3 | 1 | 343 | 1 | 336 | 0.0 | 525 |
| MS.gene045555.t1 | AT4G28480 | 71.307 | 352 | 87 | 3 | 1 | 343 | 1 | 347 | 3.11e-174 | 488 |
| MS.gene045555.t1 | AT3G08910 | 63.584 | 346 | 103 | 3 | 1 | 346 | 1 | 323 | 4.45e-160 | 451 |
| MS.gene045555.t1 | AT5G01390 | 62.644 | 348 | 112 | 5 | 1 | 344 | 1 | 334 | 6.60e-154 | 436 |
| MS.gene045555.t1 | AT4G28480 | 64.723 | 343 | 67 | 3 | 1 | 343 | 1 | 289 | 1.24e-148 | 421 |
| MS.gene045555.t1 | AT5G25530 | 55.899 | 356 | 127 | 5 | 1 | 344 | 1 | 338 | 7.85e-135 | 387 |
| MS.gene045555.t1 | AT1G10350 | 56.571 | 350 | 147 | 2 | 1 | 346 | 1 | 349 | 2.57e-134 | 387 |
| MS.gene045555.t1 | AT5G25530 | 54.670 | 364 | 127 | 6 | 1 | 344 | 1 | 346 | 7.39e-132 | 380 |
| MS.gene045555.t1 | AT1G59725 | 55.908 | 347 | 136 | 3 | 1 | 346 | 1 | 331 | 3.44e-129 | 373 |
| MS.gene045555.t1 | AT5G01390 | 54.942 | 344 | 87 | 3 | 1 | 344 | 1 | 276 | 1.17e-124 | 359 |
| MS.gene045555.t1 | AT3G47940 | 52.235 | 358 | 144 | 6 | 1 | 343 | 1 | 346 | 2.72e-119 | 348 |
| MS.gene045555.t1 | AT2G20550 | 55.789 | 285 | 77 | 3 | 104 | 343 | 3 | 283 | 1.74e-97 | 290 |
| MS.gene045555.t1 | AT2G20550 | 55.789 | 285 | 77 | 3 | 104 | 343 | 3 | 283 | 1.74e-97 | 290 |
| MS.gene045555.t1 | AT5G01390 | 46.512 | 344 | 77 | 4 | 1 | 344 | 1 | 237 | 1.42e-92 | 276 |
| MS.gene045555.t1 | AT5G01390 | 58.937 | 207 | 71 | 4 | 1 | 205 | 1 | 195 | 9.27e-73 | 226 |
| MS.gene045555.t1 | AT1G44160 | 48.404 | 188 | 97 | 0 | 160 | 347 | 170 | 357 | 1.39e-49 | 170 |
| MS.gene045555.t1 | AT3G62600 | 33.239 | 355 | 193 | 9 | 2 | 344 | 24 | 346 | 9.59e-47 | 162 |
| MS.gene045555.t1 | AT1G11040 | 42.778 | 180 | 103 | 0 | 164 | 343 | 253 | 432 | 3.76e-45 | 160 |
| MS.gene045555.t1 | AT3G44110 | 32.692 | 364 | 200 | 11 | 5 | 343 | 15 | 358 | 1.03e-38 | 142 |
| MS.gene045555.t1 | AT5G22060 | 32.970 | 367 | 196 | 12 | 5 | 343 | 15 | 359 | 1.40e-37 | 139 |
| MS.gene045555.t1 | AT1G80030 | 28.647 | 377 | 205 | 11 | 4 | 343 | 75 | 424 | 3.70e-28 | 114 |
| MS.gene045555.t1 | AT1G80030 | 28.647 | 377 | 205 | 11 | 4 | 343 | 75 | 424 | 4.46e-28 | 114 |
| MS.gene045555.t1 | AT1G80030 | 28.647 | 377 | 205 | 11 | 4 | 343 | 75 | 424 | 4.46e-28 | 114 |
| MS.gene045555.t1 | AT1G80030 | 28.647 | 377 | 205 | 11 | 4 | 343 | 75 | 424 | 4.46e-28 | 114 |
| MS.gene045555.t1 | AT2G22360 | 64.000 | 75 | 21 | 2 | 4 | 76 | 86 | 156 | 7.38e-21 | 93.6 |
| MS.gene045555.t1 | AT3G44110 | 37.391 | 115 | 70 | 1 | 201 | 313 | 214 | 328 | 3.70e-20 | 90.5 |
| MS.gene045555.t1 | AT3G44110 | 59.155 | 71 | 24 | 2 | 5 | 75 | 15 | 80 | 6.82e-11 | 63.2 |
| MS.gene045555.t1 | AT4G39960 | 54.762 | 84 | 30 | 2 | 4 | 87 | 85 | 160 | 1.85e-19 | 89.4 |
| MS.gene045555.t1 | AT4G39960 | 54.762 | 84 | 30 | 2 | 4 | 87 | 85 | 160 | 1.85e-19 | 89.4 |
| MS.gene045555.t1 | AT3G17830 | 58.442 | 77 | 26 | 2 | 2 | 76 | 61 | 133 | 3.40e-19 | 89.0 |
| MS.gene045555.t1 | AT1G68370 | 54.930 | 71 | 31 | 1 | 4 | 74 | 17 | 86 | 1.54e-16 | 80.5 |
| MS.gene045555.t1 | AT5G03160 | 52.308 | 65 | 31 | 0 | 4 | 68 | 370 | 434 | 2.07e-16 | 80.5 |
| MS.gene045555.t1 | AT5G48030 | 51.389 | 72 | 34 | 1 | 4 | 75 | 94 | 164 | 6.35e-16 | 79.0 |
| MS.gene045555.t1 | AT1G56300 | 50.000 | 66 | 30 | 1 | 5 | 67 | 14 | 79 | 3.38e-15 | 72.8 |
| MS.gene045555.t1 | AT1G56300 | 50.000 | 66 | 30 | 1 | 5 | 67 | 14 | 79 | 3.70e-15 | 71.6 |
| MS.gene045555.t1 | AT1G59980 | 47.826 | 69 | 35 | 1 | 6 | 74 | 25 | 92 | 3.99e-15 | 75.9 |
| MS.gene045555.t1 | AT1G59980 | 47.826 | 69 | 35 | 1 | 6 | 74 | 25 | 92 | 9.11e-15 | 75.5 |
| MS.gene045555.t1 | AT5G16650 | 53.125 | 64 | 29 | 1 | 4 | 67 | 11 | 73 | 9.78e-15 | 71.6 |
| MS.gene045555.t1 | AT2G35720 | 47.945 | 73 | 36 | 1 | 4 | 74 | 15 | 87 | 1.25e-14 | 75.1 |
| MS.gene045555.t1 | AT5G16650 | 53.125 | 64 | 29 | 1 | 4 | 67 | 11 | 73 | 1.41e-14 | 70.1 |
| MS.gene045555.t1 | AT3G08970 | 50.602 | 83 | 36 | 3 | 2 | 84 | 25 | 102 | 1.83e-14 | 74.7 |
| MS.gene045555.t1 | AT3G08970 | 50.602 | 83 | 36 | 3 | 2 | 84 | 25 | 102 | 1.83e-14 | 74.7 |
| MS.gene045555.t1 | AT2G41000 | 46.377 | 69 | 33 | 1 | 3 | 67 | 2 | 70 | 3.37e-14 | 71.2 |
| MS.gene045555.t1 | AT2G21510 | 51.389 | 72 | 34 | 1 | 4 | 75 | 6 | 76 | 3.65e-14 | 73.2 |
| MS.gene045555.t1 | AT2G21510 | 51.389 | 72 | 34 | 1 | 4 | 75 | 6 | 76 | 3.65e-14 | 73.2 |
| MS.gene045555.t1 | AT2G21510 | 51.389 | 72 | 34 | 1 | 4 | 75 | 6 | 76 | 4.69e-14 | 72.8 |
| MS.gene045555.t1 | AT2G21510 | 51.389 | 72 | 34 | 1 | 4 | 75 | 6 | 76 | 4.69e-14 | 72.8 |
| MS.gene045555.t1 | AT2G21510 | 51.389 | 72 | 34 | 1 | 4 | 75 | 6 | 76 | 6.56e-14 | 72.0 |
| MS.gene045555.t1 | AT2G41000 | 46.377 | 69 | 33 | 1 | 3 | 67 | 2 | 70 | 8.94e-14 | 69.3 |
| MS.gene045555.t1 | AT2G33735 | 44.615 | 65 | 35 | 1 | 4 | 68 | 22 | 85 | 2.29e-13 | 66.6 |
| MS.gene045555.t1 | AT2G33735 | 44.615 | 65 | 35 | 1 | 4 | 68 | 22 | 85 | 2.29e-13 | 66.6 |
| MS.gene045555.t1 | AT5G06910 | 47.692 | 65 | 33 | 1 | 6 | 70 | 31 | 94 | 2.30e-12 | 67.0 |
| MS.gene045555.t1 | AT4G39150 | 48.611 | 72 | 36 | 1 | 4 | 75 | 6 | 76 | 3.15e-12 | 67.4 |
| MS.gene045555.t1 | AT4G39150 | 48.611 | 72 | 36 | 1 | 4 | 75 | 6 | 76 | 3.15e-12 | 67.4 |
| MS.gene045555.t1 | AT4G39150 | 48.611 | 72 | 36 | 1 | 4 | 75 | 6 | 76 | 3.15e-12 | 67.4 |
| MS.gene045555.t1 | AT1G71000 | 45.455 | 66 | 33 | 1 | 5 | 67 | 9 | 74 | 3.29e-12 | 64.3 |
| MS.gene045555.t1 | AT1G24120 | 43.243 | 74 | 41 | 1 | 4 | 77 | 20 | 92 | 3.93e-12 | 67.4 |
| MS.gene045555.t1 | AT1G71000 | 45.455 | 66 | 33 | 1 | 5 | 67 | 9 | 74 | 8.45e-12 | 63.2 |
| MS.gene045555.t1 | AT5G05750 | 36.522 | 115 | 59 | 4 | 4 | 117 | 114 | 215 | 1.93e-11 | 64.3 |
| MS.gene045555.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 2.06e-11 | 65.1 |
| MS.gene045555.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 2.06e-11 | 65.1 |
| MS.gene045555.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 2.06e-11 | 65.1 |
| MS.gene045555.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 2.06e-11 | 65.1 |
| MS.gene045555.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 2.06e-11 | 65.1 |
| MS.gene045555.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 2.06e-11 | 65.1 |
| MS.gene045555.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 2.06e-11 | 65.1 |
| MS.gene045555.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 2.06e-11 | 65.1 |
| MS.gene045555.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 2.06e-11 | 65.1 |
| MS.gene045555.t1 | AT5G49060 | 47.761 | 67 | 33 | 1 | 4 | 70 | 99 | 163 | 2.60e-11 | 64.7 |
| MS.gene045555.t1 | AT5G49060 | 47.761 | 67 | 33 | 1 | 4 | 70 | 99 | 163 | 2.60e-11 | 64.7 |
| MS.gene045555.t1 | AT3G12170 | 46.154 | 65 | 34 | 1 | 6 | 70 | 13 | 76 | 2.72e-11 | 63.5 |
| MS.gene045555.t1 | AT3G12170 | 46.154 | 65 | 34 | 1 | 6 | 70 | 49 | 112 | 4.75e-11 | 63.2 |
| MS.gene045555.t1 | AT3G14200 | 43.750 | 64 | 34 | 1 | 6 | 67 | 14 | 77 | 5.00e-11 | 62.4 |
Find 106 sgRNAs with CRISPR-Local
Find 180 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTTCTTTGTTGGATCTTT+GGG | 0.127445 | 4.2:-31191122 | None:intergenic |
| TCCTTTCTTTGTTGGATCTT+TGG | 0.133264 | 4.2:-31191123 | None:intergenic |
| CTCAAGTTTCCTTTCTTTGT+TGG | 0.230101 | 4.2:-31191131 | None:intergenic |
| GGGAGTGGCATTCCTTCTTT+TGG | 0.244717 | 4.2:-31191101 | None:intergenic |
| AAAGCAATCTATGATCAATA+TGG | 0.252002 | 4.2:+31189685 | MS.gene045555:CDS |
| GATGATATGTTTGGGTCTTT+TGG | 0.252829 | 4.2:+31189931 | MS.gene045555:CDS |
| CTCAACTTGTTCTCAATTGC+AGG | 0.293843 | 4.2:-31190000 | None:intergenic |
| GGCTGTTCGTTGCCCTTCTC+CGG | 0.301114 | 4.2:-31190870 | None:intergenic |
| ATGAACTCAAGAAGGCTTAT+AGG | 0.305596 | 4.2:+31188976 | MS.gene045555:CDS |
| ATATGGGGAAGAAGGTTTAA+AGG | 0.306998 | 4.2:+31189702 | MS.gene045555:CDS |
| GGCATGGGTGGAAGAGGTGG+TGG | 0.326582 | 4.2:+31189868 | MS.gene045555:CDS |
| ATGGGTGGAAGAGGTGGTGG+TGG | 0.346165 | 4.2:+31189871 | MS.gene045555:CDS |
| CCAACCAGGCTTCACGGTTA+TGG | 0.350954 | 4.2:-31190823 | None:intergenic |
| TTTATCAGGGTGCCATTTCA+TGG | 0.357811 | 4.2:-31189006 | None:intergenic |
| TCTCTTGCGGAGGCCTTAAC+TGG | 0.359708 | 4.2:+31190990 | MS.gene045555:CDS |
| AGGGTCTCTGGTGGGATGTT+TGG | 0.360437 | 4.2:+31189907 | MS.gene045555:CDS |
| GCAAATTTCTGAAGCTTATG+AGG | 0.366911 | 4.2:+31189067 | MS.gene045555:CDS |
| TTTGGATTCTCAAGTCCATT+TGG | 0.376774 | 4.2:+31189844 | MS.gene045555:CDS |
| AGATCTGCGGCGGTTACATT+TGG | 0.380440 | 4.2:-31190891 | None:intergenic |
| GGTGGAAGAGGTGGTGGTGG+TGG | 0.384111 | 4.2:+31189874 | MS.gene045555:CDS |
| ATGTTTGGTGATGATATGTT+TGG | 0.387743 | 4.2:+31189922 | MS.gene045555:CDS |
| CTCAAGTCCATTTGGTGGCA+TGG | 0.388182 | 4.2:+31189852 | MS.gene045555:CDS |
| GGGGACAAAGATCACCTTCC+CGG | 0.394265 | 4.2:+31190851 | MS.gene045555:CDS |
| GGAGCTTTCCGAGGTGCAGC+TGG | 0.395400 | 4.2:-31189979 | None:intergenic |
| AAGCAATCTATGATCAATAT+GGG | 0.405655 | 4.2:+31189686 | MS.gene045555:CDS |
| ATGAACAGAAAGCAGGAGTT+AGG | 0.421138 | 4.2:+31191192 | MS.gene045555:CDS |
| TGGAACAACCTCCTCATAGT+TGG | 0.427888 | 4.2:-31191081 | None:intergenic |
| ATAGGAAACTTGCCATGAAA+TGG | 0.433703 | 4.2:+31188994 | MS.gene045555:CDS |
| CTTCTTCCAACCAGGCTTCA+CGG | 0.437558 | 4.2:-31190829 | None:intergenic |
| GAGATATGCCTGGATCGTTT+CGG | 0.440294 | 4.2:+31189782 | MS.gene045555:CDS |
| TATGGGGAAGAAGGTTTAAA+GGG | 0.443514 | 4.2:+31189703 | MS.gene045555:CDS |
| CCTCCTCCTGATGCTGGTAG+TGG | 0.444331 | 4.2:+31189733 | MS.gene045555:CDS |
| TTTGGTGGCATGGGTGGAAG+AGG | 0.453320 | 4.2:+31189862 | MS.gene045555:CDS |
| GGAACAACCTCCTCATAGTT+GGG | 0.454108 | 4.2:-31191080 | None:intergenic |
| GCTGTTCGTTGCCCTTCTCC+GGG | 0.457383 | 4.2:-31190869 | None:intergenic |
| TCAAGTCCATTTGGTGGCAT+GGG | 0.457915 | 4.2:+31189853 | MS.gene045555:CDS |
| TGTTTGGTGATGATATGTTT+GGG | 0.458122 | 4.2:+31189923 | MS.gene045555:CDS |
| GGTATGAGATCAAGGGTCTC+TGG | 0.458448 | 4.2:+31189895 | MS.gene045555:CDS |
| CCTGATGCTGGTAGTGGAGG+TGG | 0.463449 | 4.2:+31189739 | MS.gene045555:CDS |
| GGATTGAACCGAAACGATCC+AGG | 0.463929 | 4.2:-31189790 | None:intergenic |
| TTTGTTGGATCTTTGGGGAG+TGG | 0.464077 | 4.2:-31191116 | None:intergenic |
| CAATATCTCTTCTACTGGCA+TGG | 0.466117 | 4.2:-31190799 | None:intergenic |
| GGATGGATAACATTGTTGAT+TGG | 0.466142 | 4.2:-31191059 | None:intergenic |
| GTGGTGGTGGTATGAGATCA+AGG | 0.467709 | 4.2:+31189887 | MS.gene045555:CDS |
| CTTCCACCCATGCCACCAAA+TGG | 0.471500 | 4.2:-31189859 | None:intergenic |
| TTCGTTGCCCTTCTCCGGGA+AGG | 0.471928 | 4.2:-31190865 | None:intergenic |
| CAAGTTCCTCCTCCTGATGC+TGG | 0.475420 | 4.2:+31189727 | MS.gene045555:CDS |
| GGATTCTCAAGTCCATTTGG+TGG | 0.478580 | 4.2:+31189847 | MS.gene045555:CDS |
| GGTGGCATGGGTGGAAGAGG+TGG | 0.478973 | 4.2:+31189865 | MS.gene045555:CDS |
| AATCTCAGGCCGAGGAAGCC+AGG | 0.481669 | 4.2:-31191220 | None:intergenic |
| CTTCTTGAGTTCATCGTCGT+TGG | 0.485387 | 4.2:-31188967 | None:intergenic |
| CTTTCTTTGTTGGATCTTTG+GGG | 0.485748 | 4.2:-31191121 | None:intergenic |
| CGTGAAGCCTGGTTGGAAGA+AGG | 0.490276 | 4.2:+31190830 | MS.gene045555:CDS |
| GTGCACTGTGTAACCAGTTA+AGG | 0.491645 | 4.2:-31191003 | None:intergenic |
| CCCAAAGATCCAACAAAGAA+AGG | 0.493207 | 4.2:+31191122 | MS.gene045555:CDS |
| AGACTACTACAAAATCTTGC+AGG | 0.501198 | 4.2:+31188932 | MS.gene045555:CDS |
| AAAGATCACCTTCCCGGAGA+AGG | 0.502158 | 4.2:+31190857 | MS.gene045555:CDS |
| TTTGTCCCCTTCTTCCAACC+AGG | 0.502304 | 4.2:-31190837 | None:intergenic |
| TATTCCACAGGAGATATGCC+TGG | 0.507701 | 4.2:+31189772 | MS.gene045555:CDS |
| ATGGTCAATATCTCTTCTAC+TGG | 0.511842 | 4.2:-31190804 | None:intergenic |
| CCACCTCCACTACCAGCATC+AGG | 0.519423 | 4.2:-31189739 | None:intergenic |
| TATGATCAATATGGGGAAGA+AGG | 0.519474 | 4.2:+31189694 | MS.gene045555:CDS |
| GTGAAGCCTGGTTGGAAGAA+GGG | 0.524863 | 4.2:+31190831 | MS.gene045555:CDS |
| AGTCCATTTGGTGGCATGGG+TGG | 0.531924 | 4.2:+31189856 | MS.gene045555:CDS |
| CCATAACCGTGAAGCCTGGT+TGG | 0.536317 | 4.2:+31190823 | MS.gene045555:CDS |
| AGAGAAATTGCAGATGCTAG+TGG | 0.539244 | 4.2:+31190075 | MS.gene045555:CDS |
| CACAGTGCACCTCACTACAT+TGG | 0.539341 | 4.2:+31191016 | MS.gene045555:CDS |
| GGAACTAGTTTCTATTCCAC+AGG | 0.539884 | 4.2:+31189760 | MS.gene045555:CDS |
| CAACCTCCTCATAGTTGGGA+TGG | 0.540630 | 4.2:-31191076 | None:intergenic |
| GAGGTGCAGCTGGACTCATA+TGG | 0.540866 | 4.2:-31189969 | None:intergenic |
| GATCGTTTCGGTTCAATCCG+AGG | 0.541844 | 4.2:+31189794 | MS.gene045555:CDS |
| GAGGAGGTTGTTCCAAAAGA+AGG | 0.542649 | 4.2:+31191089 | MS.gene045555:CDS |
| ACTCTTGAGGAGATATATAG+AGG | 0.544484 | 4.2:+31190027 | MS.gene045555:CDS |
| AAGATCACCTTCCCGGAGAA+GGG | 0.545115 | 4.2:+31190858 | MS.gene045555:CDS |
| TTGACCATAACCGTGAAGCC+TGG | 0.557107 | 4.2:+31190819 | MS.gene045555:CDS |
| CCTCCTGATGCTGGTAGTGG+AGG | 0.558602 | 4.2:+31189736 | MS.gene045555:CDS |
| GAGAAATTGCAGATGCTAGT+GGG | 0.567439 | 4.2:+31190076 | MS.gene045555:CDS |
| CAAGTTGAGTTGCACTCTTG+AGG | 0.571644 | 4.2:+31190014 | MS.gene045555:CDS |
| TGAAGCCTGGTTGGAAGAAG+GGG | 0.572334 | 4.2:+31190832 | MS.gene045555:CDS |
| AGCAGGAGTTAGGAAACTCC+TGG | 0.572632 | 4.2:+31191202 | MS.gene045555:CDS |
| TGTTATCCATCCCAACTATG+AGG | 0.573529 | 4.2:+31191070 | MS.gene045555:CDS |
| TGTTCATCAGTGAGCCGAGT+AGG | 0.576174 | 4.2:-31191176 | None:intergenic |
| CCACTACCAGCATCAGGAGG+AGG | 0.582606 | 4.2:-31189733 | None:intergenic |
| CTCACTGATGAACAGAAAGC+AGG | 0.583619 | 4.2:+31191185 | MS.gene045555:CDS |
| AAAATGTCATCTGCATTCCT+CGG | 0.585119 | 4.2:-31189811 | None:intergenic |
| GTGCACCTCACTACATTGGA+TGG | 0.588922 | 4.2:+31191020 | MS.gene045555:CDS |
| CACAGCGTCTTCAGTCGTGA+AGG | 0.590633 | 4.2:+31190939 | MS.gene045555:CDS |
| CAACGACGATGAACTCAAGA+AGG | 0.592339 | 4.2:+31188968 | MS.gene045555:CDS |
| ATATGTTCAATCTCAGGCCG+AGG | 0.593627 | 4.2:-31191228 | None:intergenic |
| TTAACATTAAGTTTCCTACT+CGG | 0.597995 | 4.2:+31191162 | MS.gene045555:CDS |
| CGATCCAGGCATATCTCCTG+TGG | 0.604540 | 4.2:-31189776 | None:intergenic |
| TAGGAAACTCCTGGCTTCCT+CGG | 0.608981 | 4.2:+31191211 | MS.gene045555:CDS |
| TCAATTGCAGGAGCTTTCCG+AGG | 0.612083 | 4.2:-31189988 | None:intergenic |
| CAACAAAGAAAGGAAACTTG+AGG | 0.615120 | 4.2:+31191132 | MS.gene045555:CDS |
| ATGAGATCAAGGGTCTCTGG+TGG | 0.620986 | 4.2:+31189898 | MS.gene045555:CDS |
| TGGTGGTGGTATGAGATCAA+GGG | 0.622939 | 4.2:+31189888 | MS.gene045555:CDS |
| TGAGATCAAGGGTCTCTGGT+GGG | 0.625758 | 4.2:+31189899 | MS.gene045555:CDS |
| GACTCAGAAGATATCTCTTG+CGG | 0.628885 | 4.2:+31190977 | MS.gene045555:CDS |
| ACAGCGTCTTCAGTCGTGAA+GGG | 0.633069 | 4.2:+31190940 | MS.gene045555:CDS |
| TCACGACTGAAGACGCTGTG+TGG | 0.663022 | 4.2:-31190936 | None:intergenic |
| TTCTACCATCCAATGTAGTG+AGG | 0.667261 | 4.2:-31191025 | None:intergenic |
| AGCAATCTATGATCAATATG+GGG | 0.669335 | 4.2:+31189687 | MS.gene045555:CDS |
| TCAGAAGATATCTCTTGCGG+AGG | 0.676468 | 4.2:+31190980 | MS.gene045555:CDS |
| ATATGAGTCCAGCTGCACCT+CGG | 0.681757 | 4.2:+31189971 | MS.gene045555:CDS |
| TATCCATCCCAACTATGAGG+AGG | 0.689077 | 4.2:+31191073 | MS.gene045555:CDS |
| CCTCCACTACCAGCATCAGG+AGG | 0.710053 | 4.2:-31189736 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTATTTTTATGCATTATA+GGG | + | chr4.2:31190300-31190319 | MS.gene045555:intron | 10.0% |
| !!! | TAATTATTTTTATGCATTAT+AGG | + | chr4.2:31190299-31190318 | MS.gene045555:intron | 10.0% |
| !! | AAAACATCTTATTCTAAATA+AGG | - | chr4.2:31190640-31190659 | None:intergenic | 15.0% |
| !! | AAACATCTTATTCTAAATAA+GGG | - | chr4.2:31190639-31190658 | None:intergenic | 15.0% |
| !! | ACTCAATATAAAAAATTATC+TGG | + | chr4.2:31189154-31189173 | MS.gene045555:intron | 15.0% |
| !! | CTCAATATAAAAAATTATCT+GGG | + | chr4.2:31189155-31189174 | MS.gene045555:intron | 15.0% |
| !!! | ATTATTTTTATGCATTATAG+GGG | + | chr4.2:31190301-31190320 | MS.gene045555:intron | 15.0% |
| !!! | GTTATGTATTTTTGTTATAA+GGG | + | chr4.2:31189256-31189275 | MS.gene045555:intron | 15.0% |
| !!! | TAGTTTTATGTTAGTTATTA+TGG | + | chr4.2:31189337-31189356 | MS.gene045555:intron | 15.0% |
| !!! | TATAGATTTTTCATTCTATT+TGG | - | chr4.2:31190715-31190734 | None:intergenic | 15.0% |
| !!! | TTCTTTTACATTTTTTTAGT+CGG | + | chr4.2:31190130-31190149 | MS.gene045555:intron | 15.0% |
| !! | AATACATACATGGTTAATAT+TGG | - | chr4.2:31190754-31190773 | None:intergenic | 20.0% |
| !! | GACAAATTTCATATATTGTA+AGG | + | chr4.2:31190274-31190293 | MS.gene045555:intron | 20.0% |
| !! | TTGAAACAAAGCAAAAAATT+TGG | - | chr4.2:31189287-31189306 | None:intergenic | 20.0% |
| !!! | ATGAAGATTTTATATGCTTT+AGG | - | chr4.2:31190186-31190205 | None:intergenic | 20.0% |
| !!! | ATTGATGGTTTATTCTTTAA+TGG | + | chr4.2:31190359-31190378 | MS.gene045555:intron | 20.0% |
| !!! | GGTTATGTATTTTTGTTATA+AGG | + | chr4.2:31189255-31189274 | MS.gene045555:intron | 20.0% |
| !!! | TGAAGATTTTATATGCTTTA+GGG | - | chr4.2:31190185-31190204 | None:intergenic | 20.0% |
| !!! | TTATTTTTATGCATTATAGG+GGG | + | chr4.2:31190302-31190321 | MS.gene045555:intron | 20.0% |
| !!! | TTCTATCATAAACCATATTT+TGG | - | chr4.2:31189424-31189443 | None:intergenic | 20.0% |
| !!! | TTTTTGCTTTGTTTCAAATT+AGG | + | chr4.2:31189290-31189309 | MS.gene045555:intron | 20.0% |
| ! | AAAAAGATGTAGATAAGTAG+AGG | - | chr4.2:31190513-31190532 | None:intergenic | 25.0% |
| ! | AAAGCAATCTATGATCAATA+TGG | + | chr4.2:31189685-31189704 | MS.gene045555:CDS | 25.0% |
| ! | AAGCAATCTATGATCAATAT+GGG | + | chr4.2:31189686-31189705 | MS.gene045555:CDS | 25.0% |
| ! | AAGGAAGATTAATACATACA+TGG | - | chr4.2:31190764-31190783 | None:intergenic | 25.0% |
| ! | ACAAACTAAACACTAACATT+TGG | - | chr4.2:31190564-31190583 | None:intergenic | 25.0% |
| ! | TTAACATTAAGTTTCCTACT+CGG | + | chr4.2:31191162-31191181 | MS.gene045555:CDS | 25.0% |
| !! | ATGTATGGATGTTTTTCATA+AGG | + | chr4.2:31189531-31189550 | MS.gene045555:intron | 25.0% |
| !! | TGATTTATGGACTATATTGA+TGG | + | chr4.2:31190344-31190363 | MS.gene045555:intron | 25.0% |
| !! | TGTATGGATGTTTTTCATAA+GGG | + | chr4.2:31189532-31189551 | MS.gene045555:intron | 25.0% |
| !! | TTCAACAAACTTTTGTATGT+TGG | + | chr4.2:31189234-31189253 | MS.gene045555:intron | 25.0% |
| !!! | AATGTTAGTGTTTAGTTTGT+CGG | + | chr4.2:31190564-31190583 | MS.gene045555:intron | 25.0% |
| !!! | AGATGTTTTTGTTTATGCAA+TGG | + | chr4.2:31190651-31190670 | MS.gene045555:intron | 25.0% |
| !!! | TATTTTTATGCATTATAGGG+GGG | + | chr4.2:31190303-31190322 | MS.gene045555:intron | 25.0% |
| AAACATGACATTGTCAAAGT+AGG | + | chr4.2:31190412-31190431 | MS.gene045555:intron | 30.0% | |
| AAACTTTATCCAAGTAAGCA+TGG | - | chr4.2:31189482-31189501 | None:intergenic | 30.0% | |
| AGCAATCTATGATCAATATG+GGG | + | chr4.2:31189687-31189706 | MS.gene045555:CDS | 30.0% | |
| ATGCTTACTTGGATAAAGTT+TGG | + | chr4.2:31189481-31189500 | MS.gene045555:intron | 30.0% | |
| GAGATTAGAGATTAATGAGT+TGG | + | chr4.2:31189397-31189416 | MS.gene045555:intron | 30.0% | |
| GATGACAAAAATAAGATCTG+CGG | - | chr4.2:31190907-31190926 | None:intergenic | 30.0% | |
| TGCTTGGTTGAAGTTTAATT+TGG | + | chr4.2:31190158-31190177 | MS.gene045555:intron | 30.0% | |
| TTACTTTGTGTTGTCAATTG+TGG | + | chr4.2:31189632-31189651 | MS.gene045555:intron | 30.0% | |
| TTGTCAATTGTGGTTATTGA+AGG | + | chr4.2:31189642-31189661 | MS.gene045555:intron | 30.0% | |
| ! | CTTTGACAATGTCATGTTTT+AGG | - | chr4.2:31190411-31190430 | None:intergenic | 30.0% |
| ! | GACATTTTTGCAGAGTTTTT+TGG | + | chr4.2:31189826-31189845 | MS.gene045555:CDS | 30.0% |
| ! | TAATGAGTTGGACCAAAATA+TGG | + | chr4.2:31189409-31189428 | MS.gene045555:intron | 30.0% |
| ! | TCATAGATTGCTTTCTTTTC+AGG | - | chr4.2:31189679-31189698 | None:intergenic | 30.0% |
| !! | ATGTTTGGTGATGATATGTT+TGG | + | chr4.2:31189922-31189941 | MS.gene045555:CDS | 30.0% |
| !! | TGATGTCTTATTTGACTGAT+GGG | + | chr4.2:31190481-31190500 | MS.gene045555:intron | 30.0% |
| !! | TGTTGGTTGGATTTTTATCA+GGG | - | chr4.2:31189022-31189041 | None:intergenic | 30.0% |
| !! | TGTTTGGTGATGATATGTTT+GGG | + | chr4.2:31189923-31189942 | MS.gene045555:CDS | 30.0% |
| !! | TTGATGTCTTATTTGACTGA+TGG | + | chr4.2:31190480-31190499 | MS.gene045555:intron | 30.0% |
| !! | TTGTTGGTTGGATTTTTATC+AGG | - | chr4.2:31189023-31189042 | None:intergenic | 30.0% |
| !!! | TTATTTTTGTCATCGACGAA+AGG | + | chr4.2:31190913-31190932 | MS.gene045555:CDS | 30.0% |
| AAAATGTCATCTGCATTCCT+CGG | - | chr4.2:31189814-31189833 | None:intergenic | 35.0% | |
| ACTCTTGAGGAGATATATAG+AGG | + | chr4.2:31190027-31190046 | MS.gene045555:CDS | 35.0% | |
| AGACTACTACAAAATCTTGC+AGG | + | chr4.2:31188932-31188951 | MS.gene045555:CDS | 35.0% | |
| ATAGGAAACTTGCCATGAAA+TGG | + | chr4.2:31188994-31189013 | MS.gene045555:CDS | 35.0% | |
| ATATGGGGAAGAAGGTTTAA+AGG | + | chr4.2:31189702-31189721 | MS.gene045555:CDS | 35.0% | |
| ATGAACTCAAGAAGGCTTAT+AGG | + | chr4.2:31188976-31188995 | MS.gene045555:CDS | 35.0% | |
| ATGGTCAATATCTCTTCTAC+TGG | - | chr4.2:31190807-31190826 | None:intergenic | 35.0% | |
| CAACAAAGAAAGGAAACTTG+AGG | + | chr4.2:31191132-31191151 | MS.gene045555:CDS | 35.0% | |
| CCTTTCTTTGTTGGATCTTT+GGG | - | chr4.2:31191125-31191144 | None:intergenic | 35.0% | |
| CTCAAGTTTCCTTTCTTTGT+TGG | - | chr4.2:31191134-31191153 | None:intergenic | 35.0% | |
| CTTTCTTTGTTGGATCTTTG+GGG | - | chr4.2:31191124-31191143 | None:intergenic | 35.0% | |
| GGATGGATAACATTGTTGAT+TGG | - | chr4.2:31191062-31191081 | None:intergenic | 35.0% | |
| TATGATCAATATGGGGAAGA+AGG | + | chr4.2:31189694-31189713 | MS.gene045555:CDS | 35.0% | |
| TATGGGGAAGAAGGTTTAAA+GGG | + | chr4.2:31189703-31189722 | MS.gene045555:CDS | 35.0% | |
| TCCTTTCTTTGTTGGATCTT+TGG | - | chr4.2:31191126-31191145 | None:intergenic | 35.0% | |
| TTTATCCAAGTAAGCATGGT+CGG | - | chr4.2:31189478-31189497 | None:intergenic | 35.0% | |
| TTTATGCAATGGCTAATGCA+TGG | + | chr4.2:31190662-31190681 | MS.gene045555:intron | 35.0% | |
| TTTGGATTCTCAAGTCCATT+TGG | + | chr4.2:31189844-31189863 | MS.gene045555:CDS | 35.0% | |
| ! | GATGATATGTTTGGGTCTTT+TGG | + | chr4.2:31189931-31189950 | MS.gene045555:CDS | 35.0% |
| ! | TTGCTGTTGCTATTGATGTA+TGG | + | chr4.2:31189516-31189535 | MS.gene045555:intron | 35.0% |
| ! | TTGGAGAGTGTGATGATTTA+TGG | + | chr4.2:31190331-31190350 | MS.gene045555:intron | 35.0% |
| !! | GCAAATTTCTGAAGCTTATG+AGG | + | chr4.2:31189067-31189086 | MS.gene045555:CDS | 35.0% |
| !! | GGGAGAATTTGTTAGCAAAA+AGG | + | chr4.2:31190591-31190610 | MS.gene045555:intron | 35.0% |
| !! | TGTCATGTTTTAGGCTCATA+CGG | - | chr4.2:31190402-31190421 | None:intergenic | 35.0% |
| !! | TTTTTAGTCGGTTTTGTGCT+TGG | + | chr4.2:31190142-31190161 | MS.gene045555:intron | 35.0% |
| !!! | AGCTTCAGCATCTTTTTTGT+TGG | - | chr4.2:31189039-31189058 | None:intergenic | 35.0% |
| !!! | TCAGCATCTTTTTTGTTGGT+TGG | - | chr4.2:31189035-31189054 | None:intergenic | 35.0% |
| AATAAGGGCAAAGACATTGC+AGG | - | chr4.2:31190624-31190643 | None:intergenic | 40.0% | |
| ACCAAATGAGTAGCAGACAT+TGG | - | chr4.2:31190454-31190473 | None:intergenic | 40.0% | |
| AGAGAAATTGCAGATGCTAG+TGG | + | chr4.2:31190075-31190094 | MS.gene045555:CDS | 40.0% | |
| ATGAACAGAAAGCAGGAGTT+AGG | + | chr4.2:31191192-31191211 | MS.gene045555:CDS | 40.0% | |
| CAATATCTCTTCTACTGGCA+TGG | - | chr4.2:31190802-31190821 | None:intergenic | 40.0% | |
| CCAAATGAGTAGCAGACATT+GGG | - | chr4.2:31190453-31190472 | None:intergenic | 40.0% | |
| CCCAAAGATCCAACAAAGAA+AGG | + | chr4.2:31191122-31191141 | MS.gene045555:CDS | 40.0% | |
| GACAAAAATAAGATCTGCGG+CGG | - | chr4.2:31190904-31190923 | None:intergenic | 40.0% | |
| GACTCAGAAGATATCTCTTG+CGG | + | chr4.2:31190977-31190996 | MS.gene045555:CDS | 40.0% | |
| GAGAAATTGCAGATGCTAGT+GGG | + | chr4.2:31190076-31190095 | MS.gene045555:CDS | 40.0% | |
| GCATTATAGGGGGGTTAAAT+TGG | + | chr4.2:31190312-31190331 | MS.gene045555:intron | 40.0% | |
| TGTTATCCATCCCAACTATG+AGG | + | chr4.2:31191070-31191089 | MS.gene045555:CDS | 40.0% | |
| TTCTACCATCCAATGTAGTG+AGG | - | chr4.2:31191028-31191047 | None:intergenic | 40.0% | |
| ! | CTCAACTTGTTCTCAATTGC+AGG | - | chr4.2:31190003-31190022 | None:intergenic | 40.0% |
| ! | GGAACTAGTTTCTATTCCAC+AGG | + | chr4.2:31189760-31189779 | MS.gene045555:CDS | 40.0% |
| !! | ATGGTTTTGCTGCACATACA+AGG | - | chr4.2:31190783-31190802 | None:intergenic | 40.0% |
| !! | ATGTTTGGGTCTTTTGGAGA+AGG | + | chr4.2:31189937-31189956 | MS.gene045555:CDS | 40.0% |
| !! | GTTAGTGTTTAGTTTGTCGG+TGG | + | chr4.2:31190567-31190586 | MS.gene045555:intron | 40.0% |
| !! | TGTCTTATTTGACTGATGGG+TGG | + | chr4.2:31190484-31190503 | MS.gene045555:intron | 40.0% |
| !! | TTTATCAGGGTGCCATTTCA+TGG | - | chr4.2:31189009-31189028 | None:intergenic | 40.0% |
| AATGAGTAGCAGACATTGGG+TGG | - | chr4.2:31190450-31190469 | None:intergenic | 45.0% | |
| CAACGACGATGAACTCAAGA+AGG | + | chr4.2:31188968-31188987 | MS.gene045555:CDS | 45.0% | |
| CCCAATGTCTGCTACTCATT+TGG | + | chr4.2:31190450-31190469 | MS.gene045555:intron | 45.0% | |
| CTCACTGATGAACAGAAAGC+AGG | + | chr4.2:31191185-31191204 | MS.gene045555:CDS | 45.0% | |
| CTTCTTGAGTTCATCGTCGT+TGG | - | chr4.2:31188970-31188989 | None:intergenic | 45.0% | |
| GAGATATGCCTGGATCGTTT+CGG | + | chr4.2:31189782-31189801 | MS.gene045555:CDS | 45.0% | |
| GAGGAGGTTGTTCCAAAAGA+AGG | + | chr4.2:31191089-31191108 | MS.gene045555:CDS | 45.0% | |
| GGAACAACCTCCTCATAGTT+GGG | - | chr4.2:31191083-31191102 | None:intergenic | 45.0% | |
| GGATTCTCAAGTCCATTTGG+TGG | + | chr4.2:31189847-31189866 | MS.gene045555:CDS | 45.0% | |
| GGCTCATACGGTTTCTTCTT+CGG | - | chr4.2:31190390-31190409 | None:intergenic | 45.0% | |
| GTGCACTGTGTAACCAGTTA+AGG | - | chr4.2:31191006-31191025 | None:intergenic | 45.0% | |
| TATCCATCCCAACTATGAGG+AGG | + | chr4.2:31191073-31191092 | MS.gene045555:CDS | 45.0% | |
| TATTCCACAGGAGATATGCC+TGG | + | chr4.2:31189772-31189791 | MS.gene045555:CDS | 45.0% | |
| TCAGAAGATATCTCTTGCGG+AGG | + | chr4.2:31190980-31190999 | MS.gene045555:CDS | 45.0% | |
| TGGAACAACCTCCTCATAGT+TGG | - | chr4.2:31191084-31191103 | None:intergenic | 45.0% | |
| ! | CAAGTTGAGTTGCACTCTTG+AGG | + | chr4.2:31190014-31190033 | MS.gene045555:CDS | 45.0% |
| ! | TCAAGTCCATTTGGTGGCAT+GGG | + | chr4.2:31189853-31189872 | MS.gene045555:CDS | 45.0% |
| ! | TTTGTTGGATCTTTGGGGAG+TGG | - | chr4.2:31191119-31191138 | None:intergenic | 45.0% |
| !! | AGTGTTTAGTTTGTCGGTGG+AGG | + | chr4.2:31190570-31190589 | MS.gene045555:intron | 45.0% |
| !! | GTGTTTAGTTTGTCGGTGGA+GGG | + | chr4.2:31190571-31190590 | MS.gene045555:intron | 45.0% |
| !! | TGGTGGTGGTATGAGATCAA+GGG | + | chr4.2:31189888-31189907 | MS.gene045555:CDS | 45.0% |
| !! | TTTGGGTCTTTTGGAGAAGG+AGG | + | chr4.2:31189940-31189959 | MS.gene045555:CDS | 45.0% |
| !!! | ATCAAATAATTTTTTTTATT+TGG | + | chr4.2:31189603-31189622 | MS.gene045555:intron | 5.0% |
| AAAGATCACCTTCCCGGAGA+AGG | + | chr4.2:31190857-31190876 | MS.gene045555:CDS | 50.0% | |
| AAGATCACCTTCCCGGAGAA+GGG | + | chr4.2:31190858-31190877 | MS.gene045555:CDS | 50.0% | |
| ACAGCGTCTTCAGTCGTGAA+GGG | + | chr4.2:31190940-31190959 | MS.gene045555:CDS | 50.0% | |
| AGATCTGCGGCGGTTACATT+TGG | - | chr4.2:31190894-31190913 | None:intergenic | 50.0% | |
| AGCAGGAGTTAGGAAACTCC+TGG | + | chr4.2:31191202-31191221 | MS.gene045555:CDS | 50.0% | |
| ATATGAGTCCAGCTGCACCT+CGG | + | chr4.2:31189971-31189990 | MS.gene045555:CDS | 50.0% | |
| ATGAGATCAAGGGTCTCTGG+TGG | + | chr4.2:31189898-31189917 | MS.gene045555:CDS | 50.0% | |
| CAACCTCCTCATAGTTGGGA+TGG | - | chr4.2:31191079-31191098 | None:intergenic | 50.0% | |
| CACAGTGCACCTCACTACAT+TGG | + | chr4.2:31191016-31191035 | MS.gene045555:CDS | 50.0% | |
| CTTCTTCCAACCAGGCTTCA+CGG | - | chr4.2:31190832-31190851 | None:intergenic | 50.0% | |
| GATCGTTTCGGTTCAATCCG+AGG | + | chr4.2:31189794-31189813 | MS.gene045555:CDS | 50.0% | |
| GGATTGAACCGAAACGATCC+AGG | - | chr4.2:31189793-31189812 | None:intergenic | 50.0% | |
| GGTATGAGATCAAGGGTCTC+TGG | + | chr4.2:31189895-31189914 | MS.gene045555:CDS | 50.0% | |
| GTGAAGCCTGGTTGGAAGAA+GGG | + | chr4.2:31190831-31190850 | MS.gene045555:CDS | 50.0% | |
| GTGCACCTCACTACATTGGA+TGG | + | chr4.2:31191020-31191039 | MS.gene045555:CDS | 50.0% | |
| TAGGAAACTCCTGGCTTCCT+CGG | + | chr4.2:31191211-31191230 | MS.gene045555:CDS | 50.0% | |
| TCAATTGCAGGAGCTTTCCG+AGG | - | chr4.2:31189991-31190010 | None:intergenic | 50.0% | |
| TGAAGCCTGGTTGGAAGAAG+GGG | + | chr4.2:31190832-31190851 | MS.gene045555:CDS | 50.0% | |
| TGAGATCAAGGGTCTCTGGT+GGG | + | chr4.2:31189899-31189918 | MS.gene045555:CDS | 50.0% | |
| TGTTCATCAGTGAGCCGAGT+AGG | - | chr4.2:31191179-31191198 | None:intergenic | 50.0% | |
| TTGACCATAACCGTGAAGCC+TGG | + | chr4.2:31190819-31190838 | MS.gene045555:CDS | 50.0% | |
| TTTGTCCCCTTCTTCCAACC+AGG | - | chr4.2:31190840-31190859 | None:intergenic | 50.0% | |
| ! | CTCAAGTCCATTTGGTGGCA+TGG | + | chr4.2:31189852-31189871 | MS.gene045555:CDS | 50.0% |
| ! | GGGAGTGGCATTCCTTCTTT+TGG | - | chr4.2:31191104-31191123 | None:intergenic | 50.0% |
| !! | GTGGTGGTGGTATGAGATCA+AGG | + | chr4.2:31189887-31189906 | MS.gene045555:CDS | 50.0% |
| AGCATGGTCGGTCAGCTACA+TGG | - | chr4.2:31189466-31189485 | None:intergenic | 55.0% | |
| AGGGTCTCTGGTGGGATGTT+TGG | + | chr4.2:31189907-31189926 | MS.gene045555:CDS | 55.0% | |
| CAAGTTCCTCCTCCTGATGC+TGG | + | chr4.2:31189727-31189746 | MS.gene045555:CDS | 55.0% | |
| CACAGCGTCTTCAGTCGTGA+AGG | + | chr4.2:31190939-31190958 | MS.gene045555:CDS | 55.0% | |
| CCAACCAGGCTTCACGGTTA+TGG | - | chr4.2:31190826-31190845 | None:intergenic | 55.0% | |
| CCATAACCGTGAAGCCTGGT+TGG | + | chr4.2:31190823-31190842 | MS.gene045555:CDS | 55.0% | |
| CGATCCAGGCATATCTCCTG+TGG | - | chr4.2:31189779-31189798 | None:intergenic | 55.0% | |
| CGTGAAGCCTGGTTGGAAGA+AGG | + | chr4.2:31190830-31190849 | MS.gene045555:CDS | 55.0% | |
| CTTCCACCCATGCCACCAAA+TGG | - | chr4.2:31189862-31189881 | None:intergenic | 55.0% | |
| GAGGTGCAGCTGGACTCATA+TGG | - | chr4.2:31189972-31189991 | None:intergenic | 55.0% | |
| GCTGACCGACCATGCTTACT+TGG | + | chr4.2:31189470-31189489 | MS.gene045555:intron | 55.0% | |
| GGGGACAAAGATCACCTTCC+CGG | + | chr4.2:31190851-31190870 | MS.gene045555:CDS | 55.0% | |
| TCACGACTGAAGACGCTGTG+TGG | - | chr4.2:31190939-31190958 | None:intergenic | 55.0% | |
| TCTCTTGCGGAGGCCTTAAC+TGG | + | chr4.2:31190990-31191009 | MS.gene045555:CDS | 55.0% | |
| ! | AGTCCATTTGGTGGCATGGG+TGG | + | chr4.2:31189856-31189875 | MS.gene045555:CDS | 55.0% |
| ! | TTTGGTGGCATGGGTGGAAG+AGG | + | chr4.2:31189862-31189881 | MS.gene045555:CDS | 55.0% |
| !! | GGGTCTTTTGGAGAAGGAGG+AGG | + | chr4.2:31189943-31189962 | MS.gene045555:CDS | 55.0% |
| CCACCTCCACTACCAGCATC+AGG | - | chr4.2:31189742-31189761 | None:intergenic | 60.0% | |
| CCACTACCAGCATCAGGAGG+AGG | - | chr4.2:31189736-31189755 | None:intergenic | 60.0% | |
| CCTCCACTACCAGCATCAGG+AGG | - | chr4.2:31189739-31189758 | None:intergenic | 60.0% | |
| CCTCCTCCTGATGCTGGTAG+TGG | + | chr4.2:31189733-31189752 | MS.gene045555:CDS | 60.0% | |
| GCTGTTCGTTGCCCTTCTCC+GGG | - | chr4.2:31190872-31190891 | None:intergenic | 60.0% | |
| GGCTGTTCGTTGCCCTTCTC+CGG | - | chr4.2:31190873-31190892 | None:intergenic | 60.0% | |
| TTCGTTGCCCTTCTCCGGGA+AGG | - | chr4.2:31190868-31190887 | None:intergenic | 60.0% | |
| ! | ATGGGTGGAAGAGGTGGTGG+TGG | + | chr4.2:31189871-31189890 | MS.gene045555:CDS | 60.0% |
| !! | CCTCCTGATGCTGGTAGTGG+AGG | + | chr4.2:31189736-31189755 | MS.gene045555:CDS | 60.0% |
| !! | CCTGATGCTGGTAGTGGAGG+TGG | + | chr4.2:31189739-31189758 | MS.gene045555:CDS | 60.0% |
| GGAGCTTTCCGAGGTGCAGC+TGG | - | chr4.2:31189982-31190001 | None:intergenic | 65.0% | |
| GGCATGGGTGGAAGAGGTGG+TGG | + | chr4.2:31189868-31189887 | MS.gene045555:CDS | 65.0% | |
| GGTGGCATGGGTGGAAGAGG+TGG | + | chr4.2:31189865-31189884 | MS.gene045555:CDS | 65.0% | |
| !! | GGTGGAAGAGGTGGTGGTGG+TGG | + | chr4.2:31189874-31189893 | MS.gene045555:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 31188924 | 31191238 | 31188924 | ID=MS.gene045555 |
| chr4.2 | mRNA | 31188924 | 31191238 | 31188924 | ID=MS.gene045555.t1;Parent=MS.gene045555 |
| chr4.2 | exon | 31188924 | 31189088 | 31188924 | ID=MS.gene045555.t1.exon1;Parent=MS.gene045555.t1 |
| chr4.2 | CDS | 31188924 | 31189088 | 31188924 | ID=cds.MS.gene045555.t1;Parent=MS.gene045555.t1 |
| chr4.2 | exon | 31189664 | 31190097 | 31189664 | ID=MS.gene045555.t1.exon2;Parent=MS.gene045555.t1 |
| chr4.2 | CDS | 31189664 | 31190097 | 31189664 | ID=cds.MS.gene045555.t1;Parent=MS.gene045555.t1 |
| chr4.2 | exon | 31190794 | 31191238 | 31190794 | ID=MS.gene045555.t1.exon3;Parent=MS.gene045555.t1 |
| chr4.2 | CDS | 31190794 | 31191238 | 31190794 | ID=cds.MS.gene045555.t1;Parent=MS.gene045555.t1 |
| Gene Sequence |
| Protein sequence |
