Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031675.t1 | XP_003607513.1 | 98.3 | 348 | 5 | 1 | 1 | 348 | 1 | 347 | 1.10E-186 | 662.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031675.t1 | Q24133 | 44.2 | 351 | 170 | 8 | 1 | 344 | 1 | 332 | 1.3e-68 | 261.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031675.t1 | B7FHS3 | 98.3 | 348 | 5 | 1 | 1 | 348 | 1 | 347 | 7.6e-187 | 662.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene031675 | MS.gene047354 | PPI |
| MS.gene034468 | MS.gene031675 | PPI |
| MS.gene031675 | MS.gene75767 | PPI |
| MS.gene50013 | MS.gene031675 | PPI |
| MS.gene031675 | MS.gene037465 | PPI |
| MS.gene66767 | MS.gene031675 | PPI |
| MS.gene43051 | MS.gene031675 | PPI |
| MS.gene072961 | MS.gene031675 | PPI |
| MS.gene031675 | MS.gene77100 | PPI |
| MS.gene014782 | MS.gene031675 | PPI |
| MS.gene01038 | MS.gene031675 | PPI |
| MS.gene002499 | MS.gene031675 | PPI |
| MS.gene031675 | MS.gene50004 | PPI |
| MS.gene006630 | MS.gene031675 | PPI |
| MS.gene031675 | MS.gene84339 | PPI |
| MS.gene050322 | MS.gene031675 | PPI |
| MS.gene01472 | MS.gene031675 | PPI |
| MS.gene007227 | MS.gene031675 | PPI |
| MS.gene35396 | MS.gene031675 | PPI |
| MS.gene066761 | MS.gene031675 | PPI |
| MS.gene045555 | MS.gene031675 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031675.t1 | MTR_4g078850 | 98.851 | 348 | 3 | 1 | 1 | 348 | 1 | 347 | 0.0 | 700 |
| MS.gene031675.t1 | MTR_2g014470 | 78.674 | 347 | 64 | 4 | 1 | 345 | 1 | 339 | 0.0 | 533 |
| MS.gene031675.t1 | MTR_2g090705 | 69.318 | 352 | 84 | 5 | 1 | 345 | 1 | 335 | 1.14e-170 | 478 |
| MS.gene031675.t1 | MTR_4g015840 | 66.952 | 351 | 102 | 4 | 1 | 347 | 1 | 341 | 4.12e-167 | 469 |
| MS.gene031675.t1 | MTR_2g014480 | 64.655 | 348 | 104 | 6 | 1 | 338 | 1 | 339 | 2.93e-146 | 416 |
| MS.gene031675.t1 | MTR_3g108020 | 55.362 | 345 | 133 | 5 | 1 | 344 | 1 | 325 | 2.56e-127 | 368 |
| MS.gene031675.t1 | MTR_4g015840 | 64.567 | 254 | 80 | 3 | 98 | 347 | 17 | 264 | 1.95e-111 | 325 |
| MS.gene031675.t1 | MTR_5g037880 | 53.073 | 179 | 84 | 0 | 170 | 348 | 100 | 278 | 9.04e-66 | 209 |
| MS.gene031675.t1 | MTR_5g037880 | 47.368 | 95 | 36 | 2 | 4 | 91 | 5 | 92 | 3.46e-19 | 86.7 |
| MS.gene031675.t1 | MTR_7g109340 | 34.943 | 352 | 182 | 8 | 5 | 344 | 27 | 343 | 1.18e-52 | 177 |
| MS.gene031675.t1 | MTR_3g437840 | 49.689 | 161 | 81 | 0 | 185 | 345 | 2 | 162 | 1.97e-52 | 171 |
| MS.gene031675.t1 | MTR_3g088140 | 43.716 | 183 | 102 | 1 | 167 | 348 | 175 | 357 | 2.80e-49 | 169 |
| MS.gene031675.t1 | MTR_8g006430 | 32.447 | 376 | 190 | 10 | 5 | 344 | 15 | 362 | 1.01e-46 | 164 |
| MS.gene031675.t1 | MTR_2g006890 | 44.022 | 184 | 102 | 1 | 166 | 348 | 196 | 379 | 3.41e-45 | 159 |
| MS.gene031675.t1 | MTR_3g437360 | 45.882 | 170 | 87 | 4 | 162 | 328 | 171 | 338 | 5.83e-42 | 149 |
| MS.gene031675.t1 | MTR_3g437360 | 53.750 | 80 | 36 | 1 | 2 | 80 | 3 | 82 | 1.75e-19 | 88.6 |
| MS.gene031675.t1 | MTR_3g437850 | 34.975 | 203 | 92 | 5 | 3 | 201 | 1 | 167 | 1.93e-30 | 114 |
| MS.gene031675.t1 | MTR_2g087660 | 37.241 | 145 | 89 | 1 | 202 | 344 | 214 | 358 | 3.21e-26 | 108 |
| MS.gene031675.t1 | MTR_5g065160 | 27.966 | 354 | 217 | 13 | 4 | 338 | 82 | 416 | 1.16e-25 | 107 |
| MS.gene031675.t1 | MTR_5g065160 | 27.966 | 354 | 217 | 13 | 4 | 338 | 83 | 417 | 1.30e-25 | 107 |
| MS.gene031675.t1 | MTR_5g065160 | 27.966 | 354 | 217 | 13 | 4 | 338 | 76 | 410 | 1.75e-25 | 107 |
| MS.gene031675.t1 | MTR_5g065160 | 27.966 | 354 | 217 | 13 | 4 | 338 | 83 | 417 | 2.13e-25 | 106 |
| MS.gene031675.t1 | MTR_4g050420 | 36.552 | 145 | 90 | 1 | 202 | 344 | 212 | 356 | 2.85e-25 | 105 |
| MS.gene031675.t1 | MTR_4g050420 | 60.563 | 71 | 23 | 2 | 5 | 75 | 14 | 79 | 2.87e-11 | 64.7 |
| MS.gene031675.t1 | MTR_2g104030 | 27.632 | 380 | 212 | 11 | 4 | 345 | 70 | 424 | 3.65e-25 | 106 |
| MS.gene031675.t1 | MTR_3g087030 | 62.162 | 74 | 22 | 2 | 4 | 75 | 82 | 151 | 7.64e-20 | 90.5 |
| MS.gene031675.t1 | MTR_7g101070 | 58.462 | 65 | 27 | 0 | 4 | 68 | 358 | 422 | 8.50e-20 | 90.5 |
| MS.gene031675.t1 | MTR_4g023470 | 27.221 | 349 | 221 | 11 | 5 | 337 | 87 | 418 | 1.66e-19 | 89.4 |
| MS.gene031675.t1 | MTR_5g065860 | 54.688 | 64 | 28 | 1 | 4 | 67 | 48 | 110 | 9.78e-17 | 76.6 |
| MS.gene031675.t1 | MTR_7g112360 | 50.000 | 66 | 30 | 1 | 5 | 67 | 17 | 82 | 1.08e-16 | 77.0 |
| MS.gene031675.t1 | MTR_7g112360 | 50.000 | 66 | 30 | 1 | 5 | 67 | 17 | 82 | 1.61e-16 | 75.1 |
| MS.gene031675.t1 | MTR_5g012530 | 48.649 | 74 | 36 | 1 | 4 | 75 | 12 | 85 | 2.31e-16 | 80.5 |
| MS.gene031675.t1 | MTR_2g087660 | 38.776 | 98 | 58 | 1 | 202 | 297 | 214 | 311 | 3.34e-16 | 79.0 |
| MS.gene031675.t1 | MTR_3g027580 | 54.795 | 73 | 28 | 2 | 4 | 74 | 89 | 158 | 1.99e-15 | 77.4 |
| MS.gene031675.t1 | MTR_7g069480 | 51.429 | 70 | 32 | 1 | 3 | 72 | 26 | 93 | 3.55e-15 | 77.0 |
| MS.gene031675.t1 | MTR_1g110310 | 50.704 | 71 | 34 | 1 | 4 | 74 | 16 | 85 | 9.38e-15 | 75.1 |
| MS.gene031675.t1 | MTR_8g022310 | 46.377 | 69 | 32 | 1 | 4 | 67 | 10 | 78 | 1.40e-14 | 72.4 |
| MS.gene031675.t1 | MTR_8g022310 | 46.377 | 69 | 32 | 1 | 4 | 67 | 10 | 78 | 2.41e-14 | 71.2 |
| MS.gene031675.t1 | MTR_8g022310 | 46.377 | 69 | 32 | 1 | 4 | 67 | 10 | 78 | 2.49e-14 | 71.6 |
| MS.gene031675.t1 | MTR_2g436560 | 38.583 | 127 | 61 | 4 | 4 | 124 | 104 | 219 | 2.60e-14 | 73.6 |
| MS.gene031675.t1 | MTR_4g085070 | 50.000 | 60 | 27 | 1 | 11 | 67 | 19 | 78 | 2.62e-14 | 70.1 |
| MS.gene031675.t1 | MTR_8g022310 | 46.377 | 69 | 32 | 1 | 4 | 67 | 10 | 78 | 3.27e-14 | 71.6 |
| MS.gene031675.t1 | MTR_1g029460 | 44.444 | 72 | 39 | 1 | 3 | 74 | 5 | 75 | 3.31e-13 | 70.5 |
| MS.gene031675.t1 | MTR_3g100330 | 49.254 | 67 | 31 | 2 | 3 | 68 | 68 | 132 | 4.14e-13 | 68.6 |
| MS.gene031675.t1 | MTR_6g026940 | 44.928 | 69 | 34 | 1 | 3 | 67 | 1 | 69 | 6.01e-13 | 67.0 |
| MS.gene031675.t1 | MTR_5g035770 | 46.575 | 73 | 38 | 1 | 4 | 76 | 25 | 96 | 6.16e-13 | 69.7 |
| MS.gene031675.t1 | MTR_1g052110 | 49.231 | 65 | 32 | 1 | 6 | 70 | 40 | 103 | 6.96e-13 | 68.6 |
| MS.gene031675.t1 | MTR_7g092380 | 47.692 | 65 | 33 | 1 | 6 | 70 | 24 | 87 | 3.28e-12 | 66.6 |
| MS.gene031675.t1 | MTR_1g087580 | 35.659 | 129 | 76 | 4 | 223 | 346 | 59 | 185 | 3.12e-11 | 62.4 |
| MS.gene031675.t1 | MTR_3g099170 | 35.714 | 98 | 57 | 3 | 3 | 97 | 79 | 173 | 4.38e-11 | 64.7 |
| MS.gene031675.t1 | MTR_5g004570 | 45.070 | 71 | 38 | 1 | 4 | 74 | 6 | 75 | 7.73e-11 | 62.0 |
| MS.gene031675.t1 | MTR_7g016790 | 57.692 | 52 | 22 | 0 | 160 | 211 | 1 | 52 | 7.88e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031675.t1 | AT2G20560 | 76.945 | 347 | 66 | 3 | 1 | 344 | 1 | 336 | 0.0 | 527 |
| MS.gene031675.t1 | AT4G28480 | 71.105 | 353 | 87 | 3 | 1 | 344 | 1 | 347 | 4.60e-175 | 490 |
| MS.gene031675.t1 | AT3G08910 | 63.401 | 347 | 103 | 4 | 1 | 347 | 1 | 323 | 1.67e-158 | 447 |
| MS.gene031675.t1 | AT5G01390 | 62.536 | 347 | 115 | 4 | 1 | 345 | 1 | 334 | 1.21e-153 | 435 |
| MS.gene031675.t1 | AT4G28480 | 64.535 | 344 | 67 | 3 | 1 | 344 | 1 | 289 | 2.16e-149 | 422 |
| MS.gene031675.t1 | AT5G25530 | 56.303 | 357 | 125 | 6 | 1 | 345 | 1 | 338 | 1.58e-135 | 389 |
| MS.gene031675.t1 | AT1G10350 | 56.742 | 356 | 138 | 3 | 1 | 347 | 1 | 349 | 2.24e-133 | 384 |
| MS.gene031675.t1 | AT5G25530 | 55.068 | 365 | 125 | 7 | 1 | 345 | 1 | 346 | 1.28e-132 | 382 |
| MS.gene031675.t1 | AT1G59725 | 56.034 | 348 | 135 | 3 | 1 | 347 | 1 | 331 | 3.42e-130 | 375 |
| MS.gene031675.t1 | AT5G01390 | 54.783 | 345 | 87 | 3 | 1 | 345 | 1 | 276 | 1.70e-124 | 359 |
| MS.gene031675.t1 | AT3G47940 | 51.532 | 359 | 146 | 5 | 1 | 344 | 1 | 346 | 1.45e-120 | 352 |
| MS.gene031675.t1 | AT2G20550 | 55.749 | 287 | 75 | 4 | 104 | 344 | 3 | 283 | 1.30e-97 | 291 |
| MS.gene031675.t1 | AT2G20550 | 55.749 | 287 | 75 | 4 | 104 | 344 | 3 | 283 | 1.30e-97 | 291 |
| MS.gene031675.t1 | AT5G01390 | 47.246 | 345 | 74 | 4 | 1 | 345 | 1 | 237 | 7.80e-95 | 282 |
| MS.gene031675.t1 | AT5G01390 | 58.654 | 208 | 71 | 4 | 1 | 206 | 1 | 195 | 2.18e-72 | 224 |
| MS.gene031675.t1 | AT1G44160 | 48.404 | 188 | 97 | 0 | 161 | 348 | 170 | 357 | 1.35e-49 | 170 |
| MS.gene031675.t1 | AT3G62600 | 33.146 | 356 | 193 | 9 | 2 | 345 | 24 | 346 | 1.26e-46 | 162 |
| MS.gene031675.t1 | AT1G11040 | 42.778 | 180 | 103 | 0 | 165 | 344 | 253 | 432 | 4.56e-45 | 160 |
| MS.gene031675.t1 | AT3G44110 | 33.144 | 353 | 214 | 10 | 5 | 344 | 15 | 358 | 1.69e-38 | 142 |
| MS.gene031675.t1 | AT5G22060 | 32.773 | 357 | 211 | 11 | 5 | 344 | 15 | 359 | 3.32e-37 | 138 |
| MS.gene031675.t1 | AT1G80030 | 28.232 | 379 | 205 | 12 | 4 | 344 | 75 | 424 | 8.24e-27 | 110 |
| MS.gene031675.t1 | AT1G80030 | 28.232 | 379 | 205 | 12 | 4 | 344 | 75 | 424 | 1.03e-26 | 110 |
| MS.gene031675.t1 | AT1G80030 | 28.232 | 379 | 205 | 12 | 4 | 344 | 75 | 424 | 1.03e-26 | 110 |
| MS.gene031675.t1 | AT1G80030 | 28.232 | 379 | 205 | 12 | 4 | 344 | 75 | 424 | 1.03e-26 | 110 |
| MS.gene031675.t1 | AT2G22360 | 64.000 | 75 | 21 | 2 | 4 | 76 | 86 | 156 | 7.35e-21 | 93.6 |
| MS.gene031675.t1 | AT3G44110 | 37.391 | 115 | 70 | 1 | 202 | 314 | 214 | 328 | 3.94e-20 | 90.5 |
| MS.gene031675.t1 | AT3G44110 | 59.155 | 71 | 24 | 2 | 5 | 75 | 15 | 80 | 7.46e-11 | 63.2 |
| MS.gene031675.t1 | AT4G39960 | 54.762 | 84 | 30 | 2 | 4 | 87 | 85 | 160 | 2.08e-19 | 89.4 |
| MS.gene031675.t1 | AT4G39960 | 54.762 | 84 | 30 | 2 | 4 | 87 | 85 | 160 | 2.08e-19 | 89.4 |
| MS.gene031675.t1 | AT3G17830 | 58.442 | 77 | 26 | 2 | 2 | 76 | 61 | 133 | 3.79e-19 | 89.0 |
| MS.gene031675.t1 | AT1G68370 | 54.930 | 71 | 31 | 1 | 4 | 74 | 17 | 86 | 1.59e-16 | 80.5 |
| MS.gene031675.t1 | AT5G03160 | 52.308 | 65 | 31 | 0 | 4 | 68 | 370 | 434 | 2.26e-16 | 80.5 |
| MS.gene031675.t1 | AT5G48030 | 51.389 | 72 | 34 | 1 | 4 | 75 | 94 | 164 | 6.43e-16 | 79.0 |
| MS.gene031675.t1 | AT1G56300 | 50.000 | 66 | 30 | 1 | 5 | 67 | 14 | 79 | 3.44e-15 | 72.8 |
| MS.gene031675.t1 | AT1G59980 | 47.826 | 69 | 35 | 1 | 6 | 74 | 25 | 92 | 3.70e-15 | 76.3 |
| MS.gene031675.t1 | AT1G56300 | 50.000 | 66 | 30 | 1 | 5 | 67 | 14 | 79 | 3.77e-15 | 71.6 |
| MS.gene031675.t1 | AT1G59980 | 47.826 | 69 | 35 | 1 | 6 | 74 | 25 | 92 | 9.21e-15 | 75.5 |
| MS.gene031675.t1 | AT5G16650 | 53.125 | 64 | 29 | 1 | 4 | 67 | 11 | 73 | 9.57e-15 | 71.6 |
| MS.gene031675.t1 | AT2G35720 | 47.945 | 73 | 36 | 1 | 4 | 74 | 15 | 87 | 1.30e-14 | 75.1 |
| MS.gene031675.t1 | AT5G16650 | 53.125 | 64 | 29 | 1 | 4 | 67 | 11 | 73 | 1.38e-14 | 70.1 |
| MS.gene031675.t1 | AT3G08970 | 50.602 | 83 | 36 | 3 | 2 | 84 | 25 | 102 | 2.16e-14 | 74.7 |
| MS.gene031675.t1 | AT3G08970 | 50.602 | 83 | 36 | 3 | 2 | 84 | 25 | 102 | 2.16e-14 | 74.7 |
| MS.gene031675.t1 | AT2G41000 | 46.377 | 69 | 33 | 1 | 3 | 67 | 2 | 70 | 3.18e-14 | 71.2 |
| MS.gene031675.t1 | AT2G21510 | 51.389 | 72 | 34 | 1 | 4 | 75 | 6 | 76 | 4.05e-14 | 72.8 |
| MS.gene031675.t1 | AT2G21510 | 51.389 | 72 | 34 | 1 | 4 | 75 | 6 | 76 | 4.05e-14 | 72.8 |
| MS.gene031675.t1 | AT2G21510 | 51.389 | 72 | 34 | 1 | 4 | 75 | 6 | 76 | 4.91e-14 | 72.8 |
| MS.gene031675.t1 | AT2G21510 | 51.389 | 72 | 34 | 1 | 4 | 75 | 6 | 76 | 4.91e-14 | 72.8 |
| MS.gene031675.t1 | AT2G21510 | 51.389 | 72 | 34 | 1 | 4 | 75 | 6 | 76 | 6.80e-14 | 72.0 |
| MS.gene031675.t1 | AT2G41000 | 46.377 | 69 | 33 | 1 | 3 | 67 | 2 | 70 | 8.41e-14 | 69.3 |
| MS.gene031675.t1 | AT2G33735 | 44.615 | 65 | 35 | 1 | 4 | 68 | 22 | 85 | 2.26e-13 | 66.6 |
| MS.gene031675.t1 | AT2G33735 | 44.615 | 65 | 35 | 1 | 4 | 68 | 22 | 85 | 2.26e-13 | 66.6 |
| MS.gene031675.t1 | AT5G06910 | 47.692 | 65 | 33 | 1 | 6 | 70 | 31 | 94 | 2.25e-12 | 67.0 |
| MS.gene031675.t1 | AT1G71000 | 45.455 | 66 | 33 | 1 | 5 | 67 | 9 | 74 | 3.44e-12 | 64.3 |
| MS.gene031675.t1 | AT4G39150 | 48.611 | 72 | 36 | 1 | 4 | 75 | 6 | 76 | 3.45e-12 | 67.0 |
| MS.gene031675.t1 | AT4G39150 | 48.611 | 72 | 36 | 1 | 4 | 75 | 6 | 76 | 3.45e-12 | 67.0 |
| MS.gene031675.t1 | AT4G39150 | 48.611 | 72 | 36 | 1 | 4 | 75 | 6 | 76 | 3.45e-12 | 67.0 |
| MS.gene031675.t1 | AT1G24120 | 43.243 | 74 | 41 | 1 | 4 | 77 | 20 | 92 | 4.00e-12 | 67.4 |
| MS.gene031675.t1 | AT1G71000 | 45.455 | 66 | 33 | 1 | 5 | 67 | 9 | 74 | 8.93e-12 | 63.2 |
| MS.gene031675.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 2.23e-11 | 65.1 |
| MS.gene031675.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 2.23e-11 | 65.1 |
| MS.gene031675.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 2.23e-11 | 65.1 |
| MS.gene031675.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 2.23e-11 | 65.1 |
| MS.gene031675.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 2.23e-11 | 65.1 |
| MS.gene031675.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 2.23e-11 | 65.1 |
| MS.gene031675.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 2.23e-11 | 65.1 |
| MS.gene031675.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 2.23e-11 | 65.1 |
| MS.gene031675.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 2.23e-11 | 65.1 |
| MS.gene031675.t1 | AT5G05750 | 36.522 | 115 | 59 | 4 | 4 | 117 | 114 | 215 | 2.34e-11 | 64.3 |
| MS.gene031675.t1 | AT3G12170 | 46.154 | 65 | 34 | 1 | 6 | 70 | 13 | 76 | 2.82e-11 | 63.5 |
| MS.gene031675.t1 | AT5G49060 | 47.761 | 67 | 33 | 1 | 4 | 70 | 99 | 163 | 2.84e-11 | 64.3 |
| MS.gene031675.t1 | AT5G49060 | 47.761 | 67 | 33 | 1 | 4 | 70 | 99 | 163 | 2.84e-11 | 64.3 |
| MS.gene031675.t1 | AT3G12170 | 46.154 | 65 | 34 | 1 | 6 | 70 | 49 | 112 | 4.61e-11 | 63.5 |
| MS.gene031675.t1 | AT3G14200 | 43.750 | 64 | 34 | 1 | 6 | 67 | 14 | 77 | 4.71e-11 | 62.4 |
Find 106 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTTCTTTGTTGGATCTTT+GGG | 0.127445 | 4.3:+30369046 | None:intergenic |
| TCCTTTCTTTGTTGGATCTT+TGG | 0.133264 | 4.3:+30369045 | None:intergenic |
| CTCAAGTTTCCTTTCTTTGT+TGG | 0.230101 | 4.3:+30369037 | None:intergenic |
| GGGAGTGGCATTCCTTCTTT+TGG | 0.244717 | 4.3:+30369067 | None:intergenic |
| AAAGCAATCTATGATCAATA+TGG | 0.252002 | 4.3:-30370485 | MS.gene031675:CDS |
| GATGATATGTTTGGGTCTTT+TGG | 0.252829 | 4.3:-30370236 | MS.gene031675:CDS |
| GGTGGAAGAGGTGGTGGTGG+TGG | 0.279913 | 4.3:-30370296 | MS.gene031675:CDS |
| GGAAGAGGTGGTGGTGGTGG+TGG | 0.283132 | 4.3:-30370293 | MS.gene031675:CDS |
| CTCAACTTGTTCTCAATTGC+AGG | 0.293843 | 4.3:+30370167 | None:intergenic |
| GGCTGTTCGTTGCCCTTCTC+CGG | 0.301114 | 4.3:+30369298 | None:intergenic |
| ATGAACTCAAGAAGGCTTAT+AGG | 0.305596 | 4.3:-30371196 | MS.gene031675:CDS |
| ATATGGGGAAGAAGGTTTAA+AGG | 0.306998 | 4.3:-30370468 | MS.gene031675:CDS |
| GGCATGGGTGGAAGAGGTGG+TGG | 0.326582 | 4.3:-30370302 | MS.gene031675:CDS |
| ATGGGTGGAAGAGGTGGTGG+TGG | 0.346165 | 4.3:-30370299 | MS.gene031675:CDS |
| CCAACCAGGCTTCACGGTTA+TGG | 0.350954 | 4.3:+30369345 | None:intergenic |
| TTTATCAGGGTGCCATTTCA+TGG | 0.357811 | 4.3:+30371166 | None:intergenic |
| TCTCTTGCGGAGGCCTTAAC+TGG | 0.359708 | 4.3:-30369178 | MS.gene031675:CDS |
| GCAAATTTCTGAAGCTTATG+AGG | 0.366911 | 4.3:-30371105 | MS.gene031675:intron |
| TTTGGATTCTCAAGTCCATT+TGG | 0.376774 | 4.3:-30370326 | MS.gene031675:CDS |
| AGATCTGCGGCGGTTACATT+TGG | 0.380440 | 4.3:+30369277 | None:intergenic |
| ATGTTTGGTGATGATATGTT+TGG | 0.387743 | 4.3:-30370245 | MS.gene031675:CDS |
| CTCAAGTCCATTTGGTGGCA+TGG | 0.388182 | 4.3:-30370318 | MS.gene031675:CDS |
| GGGGACAAAGATCACCTTCC+CGG | 0.394265 | 4.3:-30369317 | MS.gene031675:CDS |
| GGAGCTTTCCGAGGTGCAGC+TGG | 0.395400 | 4.3:+30370188 | None:intergenic |
| AAGCAATCTATGATCAATAT+GGG | 0.405655 | 4.3:-30370484 | MS.gene031675:CDS |
| AGGTTCTCTGGTGGGATGTT+TGG | 0.420074 | 4.3:-30370260 | MS.gene031675:CDS |
| ATGAACAGAAAGCAGGAGTT+AGG | 0.421138 | 4.3:-30368976 | MS.gene031675:CDS |
| TGGAACAACCTCCTCATAGT+TGG | 0.427888 | 4.3:+30369087 | None:intergenic |
| ATAGGAAACTTGCCATGAAA+TGG | 0.433703 | 4.3:-30371178 | MS.gene031675:CDS |
| CTTCTTCCAACCAGGCTTCA+CGG | 0.437558 | 4.3:+30369339 | None:intergenic |
| GAGATATGCCTGGATCGTTT+CGG | 0.440294 | 4.3:-30370388 | MS.gene031675:CDS |
| TATGGGGAAGAAGGTTTAAA+GGG | 0.443514 | 4.3:-30370467 | MS.gene031675:CDS |
| CCTCCTCCTGATGCTGGTAG+TGG | 0.444331 | 4.3:-30370437 | MS.gene031675:CDS |
| TTTGGTGGCATGGGTGGAAG+AGG | 0.453320 | 4.3:-30370308 | MS.gene031675:CDS |
| GGAACAACCTCCTCATAGTT+GGG | 0.454108 | 4.3:+30369088 | None:intergenic |
| GCTGTTCGTTGCCCTTCTCC+GGG | 0.457383 | 4.3:+30369299 | None:intergenic |
| TCAAGTCCATTTGGTGGCAT+GGG | 0.457915 | 4.3:-30370317 | MS.gene031675:CDS |
| TGTTTGGTGATGATATGTTT+GGG | 0.458122 | 4.3:-30370244 | MS.gene031675:CDS |
| CCTGATGCTGGTAGTGGAGG+TGG | 0.463449 | 4.3:-30370431 | MS.gene031675:CDS |
| GGATTGAACCGAAACGATCC+AGG | 0.463929 | 4.3:+30370380 | None:intergenic |
| TTTGTTGGATCTTTGGGGAG+TGG | 0.464077 | 4.3:+30369052 | None:intergenic |
| CAATATCTCTTCTACTGGCA+TGG | 0.466117 | 4.3:+30369369 | None:intergenic |
| GGATGGATAACATTGTTGAT+TGG | 0.466142 | 4.3:+30369109 | None:intergenic |
| CTTCCACCCATGCCACCAAA+TGG | 0.471500 | 4.3:+30370311 | None:intergenic |
| TTCGTTGCCCTTCTCCGGGA+AGG | 0.471928 | 4.3:+30369303 | None:intergenic |
| CAAGTTCCTCCTCCTGATGC+TGG | 0.475420 | 4.3:-30370443 | MS.gene031675:CDS |
| GGATTCTCAAGTCCATTTGG+TGG | 0.478580 | 4.3:-30370323 | MS.gene031675:CDS |
| GGTGGCATGGGTGGAAGAGG+TGG | 0.478973 | 4.3:-30370305 | MS.gene031675:CDS |
| AATCTCAGGCCGAGGAAGCC+AGG | 0.481669 | 4.3:+30368948 | None:intergenic |
| CTTCTTGAGTTCATCGTCGT+TGG | 0.485387 | 4.3:+30371205 | None:intergenic |
| CTTTCTTTGTTGGATCTTTG+GGG | 0.485748 | 4.3:+30369047 | None:intergenic |
| CGTGAAGCCTGGTTGGAAGA+AGG | 0.490276 | 4.3:-30369338 | MS.gene031675:CDS |
| GTGCACTGTGTAACCAGTTA+AGG | 0.491645 | 4.3:+30369165 | None:intergenic |
| CCCAAAGATCCAACAAAGAA+AGG | 0.493207 | 4.3:-30369046 | MS.gene031675:CDS |
| GTGGTGGTGGTATGAGATCA+AGG | 0.495448 | 4.3:-30370280 | MS.gene031675:CDS |
| AGACTACTACAAAATCTTGC+AGG | 0.501198 | 4.3:-30371240 | MS.gene031675:CDS |
| AAAGATCACCTTCCCGGAGA+AGG | 0.502158 | 4.3:-30369311 | MS.gene031675:CDS |
| TTTGTCCCCTTCTTCCAACC+AGG | 0.502304 | 4.3:+30369331 | None:intergenic |
| GGTATGAGATCAAGGTTCTC+TGG | 0.506062 | 4.3:-30370272 | MS.gene031675:CDS |
| TATTCCACAGGAGATATGCC+TGG | 0.507701 | 4.3:-30370398 | MS.gene031675:CDS |
| ATGGTCAATATCTCTTCTAC+TGG | 0.511842 | 4.3:+30369364 | None:intergenic |
| CCACCTCCACTACCAGCATC+AGG | 0.519423 | 4.3:+30370431 | None:intergenic |
| TATGATCAATATGGGGAAGA+AGG | 0.519474 | 4.3:-30370476 | MS.gene031675:CDS |
| GTGAAGCCTGGTTGGAAGAA+GGG | 0.524863 | 4.3:-30369337 | MS.gene031675:CDS |
| AGTCCATTTGGTGGCATGGG+TGG | 0.531924 | 4.3:-30370314 | MS.gene031675:CDS |
| CCATAACCGTGAAGCCTGGT+TGG | 0.536317 | 4.3:-30369345 | MS.gene031675:CDS |
| AGAGAAATTGCAGATGCTAG+TGG | 0.539244 | 4.3:-30370092 | MS.gene031675:CDS |
| CACAGTGCACCTCACTACAT+TGG | 0.539341 | 4.3:-30369152 | MS.gene031675:CDS |
| GGAACTAGTTTCTATTCCAC+AGG | 0.539884 | 4.3:-30370410 | MS.gene031675:CDS |
| CAACCTCCTCATAGTTGGGA+TGG | 0.540630 | 4.3:+30369092 | None:intergenic |
| GAGGTGCAGCTGGACTCATA+TGG | 0.540866 | 4.3:+30370198 | None:intergenic |
| GATCGTTTCGGTTCAATCCG+AGG | 0.541844 | 4.3:-30370376 | MS.gene031675:CDS |
| GAGGAGGTTGTTCCAAAAGA+AGG | 0.542649 | 4.3:-30369079 | MS.gene031675:CDS |
| ACTCTTGAGGAGATATATAG+AGG | 0.544484 | 4.3:-30370140 | MS.gene031675:CDS |
| AAGATCACCTTCCCGGAGAA+GGG | 0.545115 | 4.3:-30369310 | MS.gene031675:CDS |
| TTGACCATAACCGTGAAGCC+TGG | 0.557107 | 4.3:-30369349 | MS.gene031675:CDS |
| CCTCCTGATGCTGGTAGTGG+AGG | 0.558602 | 4.3:-30370434 | MS.gene031675:CDS |
| GAGAAATTGCAGATGCTAGT+GGG | 0.567439 | 4.3:-30370091 | MS.gene031675:intron |
| CAAGTTGAGTTGCACTCTTG+AGG | 0.571644 | 4.3:-30370153 | MS.gene031675:CDS |
| TGAAGCCTGGTTGGAAGAAG+GGG | 0.572334 | 4.3:-30369336 | MS.gene031675:CDS |
| AGCAGGAGTTAGGAAACTCC+TGG | 0.572632 | 4.3:-30368966 | MS.gene031675:CDS |
| TGTTATCCATCCCAACTATG+AGG | 0.573529 | 4.3:-30369098 | MS.gene031675:CDS |
| TGTTCATCAGTGAGCCGAGT+AGG | 0.576174 | 4.3:+30368992 | None:intergenic |
| CCACTACCAGCATCAGGAGG+AGG | 0.582606 | 4.3:+30370437 | None:intergenic |
| CTCACTGATGAACAGAAAGC+AGG | 0.583619 | 4.3:-30368983 | MS.gene031675:CDS |
| TGAGATCAAGGTTCTCTGGT+GGG | 0.584925 | 4.3:-30370268 | MS.gene031675:CDS |
| AAAATGTCATCTGCATTCCT+CGG | 0.585119 | 4.3:+30370359 | None:intergenic |
| GTGCACCTCACTACATTGGA+TGG | 0.588922 | 4.3:-30369148 | MS.gene031675:CDS |
| CACAGCGTCTTCAGTCGTGA+AGG | 0.590633 | 4.3:-30369229 | MS.gene031675:CDS |
| CAACGACGATGAACTCAAGA+AGG | 0.592339 | 4.3:-30371204 | MS.gene031675:CDS |
| ATATGTTCAATCTCAGGCCG+AGG | 0.593627 | 4.3:+30368940 | None:intergenic |
| TTAACATTAAGTTTCCTACT+CGG | 0.597995 | 4.3:-30369006 | MS.gene031675:CDS |
| CGATCCAGGCATATCTCCTG+TGG | 0.604540 | 4.3:+30370394 | None:intergenic |
| TAGGAAACTCCTGGCTTCCT+CGG | 0.608981 | 4.3:-30368957 | MS.gene031675:CDS |
| TCAATTGCAGGAGCTTTCCG+AGG | 0.612083 | 4.3:+30370179 | None:intergenic |
| CAACAAAGAAAGGAAACTTG+AGG | 0.615120 | 4.3:-30369036 | MS.gene031675:CDS |
| GACTCAGAAGATATCTCTTG+CGG | 0.628885 | 4.3:-30369191 | MS.gene031675:CDS |
| ATGAGATCAAGGTTCTCTGG+TGG | 0.629186 | 4.3:-30370269 | MS.gene031675:CDS |
| ACAGCGTCTTCAGTCGTGAA+GGG | 0.633069 | 4.3:-30369228 | MS.gene031675:CDS |
| TCACGACTGAAGACGCTGTG+TGG | 0.663022 | 4.3:+30369232 | None:intergenic |
| TTCTACCATCCAATGTAGTG+AGG | 0.667261 | 4.3:+30369143 | None:intergenic |
| AGCAATCTATGATCAATATG+GGG | 0.669335 | 4.3:-30370483 | MS.gene031675:CDS |
| TCAGAAGATATCTCTTGCGG+AGG | 0.676468 | 4.3:-30369188 | MS.gene031675:CDS |
| ATATGAGTCCAGCTGCACCT+CGG | 0.681757 | 4.3:-30370196 | MS.gene031675:CDS |
| TATCCATCCCAACTATGAGG+AGG | 0.689077 | 4.3:-30369095 | MS.gene031675:CDS |
| CCTCCACTACCAGCATCAGG+AGG | 0.710053 | 4.3:+30370434 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTATTTTTATGCATTATA+GGG | - | chr4.3:30370333-30370352 | MS.gene031675:CDS | 10.0% |
| !!! | TAATTATTTTTATGCATTAT+AGG | - | chr4.3:30370332-30370351 | MS.gene031675:CDS | 10.0% |
| !! | AAAACATCTTATTCTAAATA+AGG | + | chr4.3:30370672-30370691 | None:intergenic | 15.0% |
| !! | AAACATCTTATTCTAAATAA+GGG | + | chr4.3:30370671-30370690 | None:intergenic | 15.0% |
| !! | ACTCAATATAAAAAATTATC+TGG | - | chr4.3:30369182-30369201 | MS.gene031675:CDS | 15.0% |
| !! | CTCAATATAAAAAATTATCT+GGG | - | chr4.3:30369183-30369202 | MS.gene031675:CDS | 15.0% |
| !!! | ATTATTTTTATGCATTATAG+GGG | - | chr4.3:30370334-30370353 | MS.gene031675:CDS | 15.0% |
| !!! | GTTATGTATTTTTGTTATAA+GGG | - | chr4.3:30369284-30369303 | MS.gene031675:CDS | 15.0% |
| !!! | TAGTTTTATGTTAGTTATTA+TGG | - | chr4.3:30369365-30369384 | MS.gene031675:CDS | 15.0% |
| !!! | TATAGATTTTTCATTCTATT+TGG | + | chr4.3:30370747-30370766 | None:intergenic | 15.0% |
| !!! | TTCTTTTACATTTTTTTAGT+CGG | - | chr4.3:30370163-30370182 | MS.gene031675:CDS | 15.0% |
| !! | AATACATACATGGTTAATAT+TGG | + | chr4.3:30370786-30370805 | None:intergenic | 20.0% |
| !! | TTGAAACAAAGCAAAAAATT+TGG | + | chr4.3:30369315-30369334 | None:intergenic | 20.0% |
| !!! | ATGAAGATTTTATATGCTTT+AGG | + | chr4.3:30370219-30370238 | None:intergenic | 20.0% |
| !!! | ATTGATGGTTTATTCTTTAA+TGG | - | chr4.3:30370392-30370411 | MS.gene031675:CDS | 20.0% |
| !!! | GGTTATGTATTTTTGTTATA+AGG | - | chr4.3:30369283-30369302 | MS.gene031675:CDS | 20.0% |
| !!! | TGAAGATTTTATATGCTTTA+GGG | + | chr4.3:30370218-30370237 | None:intergenic | 20.0% |
| !!! | TTATTTTTATGCATTATAGG+GGG | - | chr4.3:30370335-30370354 | MS.gene031675:CDS | 20.0% |
| !!! | TTCTATCATAAACCATATTT+TGG | + | chr4.3:30369452-30369471 | None:intergenic | 20.0% |
| !!! | TTTTTGCTTTGTTTCAAATT+AGG | - | chr4.3:30369318-30369337 | MS.gene031675:CDS | 20.0% |
| ! | AAAAAGATGTAGATAAGTAG+AGG | + | chr4.3:30370546-30370565 | None:intergenic | 25.0% |
| ! | AAAGCAATCTATGATCAATA+TGG | - | chr4.3:30369715-30369734 | MS.gene031675:intron | 25.0% |
| ! | AAGCAATCTATGATCAATAT+GGG | - | chr4.3:30369716-30369735 | MS.gene031675:intron | 25.0% |
| ! | AAGGAAGATTAATACATACA+TGG | + | chr4.3:30370796-30370815 | None:intergenic | 25.0% |
| ! | ACAAACTAAACACTAACATT+TGG | + | chr4.3:30370596-30370615 | None:intergenic | 25.0% |
| ! | GACGAATTTCATATATTGTA+AGG | - | chr4.3:30370307-30370326 | MS.gene031675:CDS | 25.0% |
| ! | TTAACATTAAGTTTCCTACT+CGG | - | chr4.3:30371194-30371213 | MS.gene031675:CDS | 25.0% |
| !! | ATGTATGGATGTTTTTCATA+AGG | - | chr4.3:30369559-30369578 | MS.gene031675:intron | 25.0% |
| !! | TGATTTATGGACTATATTGA+TGG | - | chr4.3:30370377-30370396 | MS.gene031675:CDS | 25.0% |
| !! | TGTATGGATGTTTTTCATAA+GGG | - | chr4.3:30369560-30369579 | MS.gene031675:intron | 25.0% |
| !! | TTCAACAAACTTTTGTATGT+TGG | - | chr4.3:30369262-30369281 | MS.gene031675:CDS | 25.0% |
| !!! | AATGTTAGTGTTTAGTTTGT+CGG | - | chr4.3:30370596-30370615 | MS.gene031675:intron | 25.0% |
| !!! | AGATGTTTTTGTTTATGCAA+TGG | - | chr4.3:30370683-30370702 | MS.gene031675:intron | 25.0% |
| !!! | TATTTTTATGCATTATAGGG+GGG | - | chr4.3:30370336-30370355 | MS.gene031675:CDS | 25.0% |
| AAACATGACATTGTCAAAGT+AGG | - | chr4.3:30370445-30370464 | MS.gene031675:CDS | 30.0% | |
| AAACTTTATCCAAGTAAGCA+TGG | + | chr4.3:30369510-30369529 | None:intergenic | 30.0% | |
| AGCAATCTATGATCAATATG+GGG | - | chr4.3:30369717-30369736 | MS.gene031675:intron | 30.0% | |
| ATGCTTACTTGGATAAAGTT+TGG | - | chr4.3:30369509-30369528 | MS.gene031675:intron | 30.0% | |
| GAGATTAGAGATTAATGAGT+TGG | - | chr4.3:30369425-30369444 | MS.gene031675:intron | 30.0% | |
| GATGACAAAAATAAGATCTG+CGG | + | chr4.3:30370939-30370958 | None:intergenic | 30.0% | |
| TGCTTGGTTGAAGTTTAATT+TGG | - | chr4.3:30370191-30370210 | MS.gene031675:CDS | 30.0% | |
| TTACTTTGTGTTGTCAATTG+TGG | - | chr4.3:30369662-30369681 | MS.gene031675:intron | 30.0% | |
| TTGTCAATTGTGGTTATTGA+AGG | - | chr4.3:30369672-30369691 | MS.gene031675:intron | 30.0% | |
| ! | CTTTGACAATGTCATGTTTT+AGG | + | chr4.3:30370444-30370463 | None:intergenic | 30.0% |
| ! | GACATTTTTGCAGAGTTTTT+TGG | - | chr4.3:30369856-30369875 | MS.gene031675:intron | 30.0% |
| ! | TAATGAGTTGGACCAAAATA+TGG | - | chr4.3:30369437-30369456 | MS.gene031675:intron | 30.0% |
| ! | TCATAGATTGCTTTCTTTTC+AGG | + | chr4.3:30369709-30369728 | None:intergenic | 30.0% |
| !! | ATGTTTGGTGATGATATGTT+TGG | - | chr4.3:30369955-30369974 | MS.gene031675:intron | 30.0% |
| !! | TGATGTCTTATTTGACTGAT+GGG | - | chr4.3:30370514-30370533 | MS.gene031675:intron | 30.0% |
| !! | TGTTGGTTGGATTTTTATCA+GGG | + | chr4.3:30369050-30369069 | None:intergenic | 30.0% |
| !! | TGTTTGGTGATGATATGTTT+GGG | - | chr4.3:30369956-30369975 | MS.gene031675:intron | 30.0% |
| !! | TTGATGTCTTATTTGACTGA+TGG | - | chr4.3:30370513-30370532 | MS.gene031675:intron | 30.0% |
| !! | TTGTTGGTTGGATTTTTATC+AGG | + | chr4.3:30369051-30369070 | None:intergenic | 30.0% |
| !!! | TTATTTTTGTCATCGACGAA+AGG | - | chr4.3:30370945-30370964 | MS.gene031675:intron | 30.0% |
| AAAATGTCATCTGCATTCCT+CGG | + | chr4.3:30369844-30369863 | None:intergenic | 35.0% | |
| ACTCTTGAGGAGATATATAG+AGG | - | chr4.3:30370060-30370079 | MS.gene031675:intron | 35.0% | |
| AGACTACTACAAAATCTTGC+AGG | - | chr4.3:30368960-30368979 | MS.gene031675:CDS | 35.0% | |
| ATAGGAAACTTGCCATGAAA+TGG | - | chr4.3:30369022-30369041 | MS.gene031675:CDS | 35.0% | |
| ATATGGGGAAGAAGGTTTAA+AGG | - | chr4.3:30369732-30369751 | MS.gene031675:intron | 35.0% | |
| ATGAACTCAAGAAGGCTTAT+AGG | - | chr4.3:30369004-30369023 | MS.gene031675:CDS | 35.0% | |
| ATGGTCAATATCTCTTCTAC+TGG | + | chr4.3:30370839-30370858 | None:intergenic | 35.0% | |
| CAACAAAGAAAGGAAACTTG+AGG | - | chr4.3:30371164-30371183 | MS.gene031675:CDS | 35.0% | |
| CCTTTCTTTGTTGGATCTTT+GGG | + | chr4.3:30371157-30371176 | None:intergenic | 35.0% | |
| CTCAAGTTTCCTTTCTTTGT+TGG | + | chr4.3:30371166-30371185 | None:intergenic | 35.0% | |
| CTTTCTTTGTTGGATCTTTG+GGG | + | chr4.3:30371156-30371175 | None:intergenic | 35.0% | |
| GGATGGATAACATTGTTGAT+TGG | + | chr4.3:30371094-30371113 | None:intergenic | 35.0% | |
| TATGATCAATATGGGGAAGA+AGG | - | chr4.3:30369724-30369743 | MS.gene031675:intron | 35.0% | |
| TATGGGGAAGAAGGTTTAAA+GGG | - | chr4.3:30369733-30369752 | MS.gene031675:intron | 35.0% | |
| TCCTTTCTTTGTTGGATCTT+TGG | + | chr4.3:30371158-30371177 | None:intergenic | 35.0% | |
| TTTATCCAAGTAAGCATGGT+CGG | + | chr4.3:30369506-30369525 | None:intergenic | 35.0% | |
| TTTATGCAATGGCTAATGCA+TGG | - | chr4.3:30370694-30370713 | MS.gene031675:intron | 35.0% | |
| TTTGGATTCTCAAGTCCATT+TGG | - | chr4.3:30369874-30369893 | MS.gene031675:intron | 35.0% | |
| ! | GATGATATGTTTGGGTCTTT+TGG | - | chr4.3:30369964-30369983 | MS.gene031675:intron | 35.0% |
| ! | TTGCTGTTGCTATTGATGTA+TGG | - | chr4.3:30369544-30369563 | MS.gene031675:intron | 35.0% |
| ! | TTGGAGAGTGTGATGATTTA+TGG | - | chr4.3:30370364-30370383 | MS.gene031675:CDS | 35.0% |
| !! | GCAAATTTCTGAAGCTTATG+AGG | - | chr4.3:30369095-30369114 | MS.gene031675:CDS | 35.0% |
| !! | GGGAGAATTTGTTAGCAAAA+AGG | - | chr4.3:30370623-30370642 | MS.gene031675:intron | 35.0% |
| !! | TGTCATGTTTTAGGCTCATA+CGG | + | chr4.3:30370435-30370454 | None:intergenic | 35.0% |
| !! | TTTTTAGTCGGTTTTGTGCT+TGG | - | chr4.3:30370175-30370194 | MS.gene031675:CDS | 35.0% |
| !!! | AGCTTCAGCATCTTTTTTGT+TGG | + | chr4.3:30369067-30369086 | None:intergenic | 35.0% |
| !!! | TCAGCATCTTTTTTGTTGGT+TGG | + | chr4.3:30369063-30369082 | None:intergenic | 35.0% |
| AATAAGGGCAAAGACATTGC+AGG | + | chr4.3:30370656-30370675 | None:intergenic | 40.0% | |
| ACCAAATGAGTAGCAGACAT+TGG | + | chr4.3:30370487-30370506 | None:intergenic | 40.0% | |
| AGAGAAATTGCAGATGCTAG+TGG | - | chr4.3:30370108-30370127 | MS.gene031675:CDS | 40.0% | |
| ATGAACAGAAAGCAGGAGTT+AGG | - | chr4.3:30371224-30371243 | MS.gene031675:CDS | 40.0% | |
| CAATATCTCTTCTACTGGCA+TGG | + | chr4.3:30370834-30370853 | None:intergenic | 40.0% | |
| CCAAATGAGTAGCAGACATT+GGG | + | chr4.3:30370486-30370505 | None:intergenic | 40.0% | |
| CCCAAAGATCCAACAAAGAA+AGG | - | chr4.3:30371154-30371173 | MS.gene031675:CDS | 40.0% | |
| GACAAAAATAAGATCTGCGG+CGG | + | chr4.3:30370936-30370955 | None:intergenic | 40.0% | |
| GACTCAGAAGATATCTCTTG+CGG | - | chr4.3:30371009-30371028 | MS.gene031675:intron | 40.0% | |
| GAGAAATTGCAGATGCTAGT+GGG | - | chr4.3:30370109-30370128 | MS.gene031675:CDS | 40.0% | |
| GCATTATAGGGGGGTTAAAT+TGG | - | chr4.3:30370345-30370364 | MS.gene031675:CDS | 40.0% | |
| TGTTATCCATCCCAACTATG+AGG | - | chr4.3:30371102-30371121 | MS.gene031675:intron | 40.0% | |
| TTCTACCATCCAATGTAGTG+AGG | + | chr4.3:30371060-30371079 | None:intergenic | 40.0% | |
| ! | CTCAACTTGTTCTCAATTGC+AGG | + | chr4.3:30370036-30370055 | None:intergenic | 40.0% |
| ! | GGAACTAGTTTCTATTCCAC+AGG | - | chr4.3:30369790-30369809 | MS.gene031675:intron | 40.0% |
| !! | ATGGTTTTGCTGCACATACA+AGG | + | chr4.3:30370815-30370834 | None:intergenic | 40.0% |
| !! | ATGTTTGGGTCTTTTGGAGA+AGG | - | chr4.3:30369970-30369989 | MS.gene031675:intron | 40.0% |
| !! | GTTAGTGTTTAGTTTGTCGG+TGG | - | chr4.3:30370599-30370618 | MS.gene031675:intron | 40.0% |
| !! | TGTCTTATTTGACTGATGGG+TGG | - | chr4.3:30370517-30370536 | MS.gene031675:intron | 40.0% |
| !! | TTTATCAGGGTGCCATTTCA+TGG | + | chr4.3:30369037-30369056 | None:intergenic | 40.0% |
| AATGAGTAGCAGACATTGGG+TGG | + | chr4.3:30370483-30370502 | None:intergenic | 45.0% | |
| ATGAGATCAAGGTTCTCTGG+TGG | - | chr4.3:30369931-30369950 | MS.gene031675:intron | 45.0% | |
| CAACGACGATGAACTCAAGA+AGG | - | chr4.3:30368996-30369015 | MS.gene031675:CDS | 45.0% | |
| CCCAATGTCTGCTACTCATT+TGG | - | chr4.3:30370483-30370502 | MS.gene031675:CDS | 45.0% | |
| CTCACTGATGAACAGAAAGC+AGG | - | chr4.3:30371217-30371236 | MS.gene031675:CDS | 45.0% | |
| CTTCTTGAGTTCATCGTCGT+TGG | + | chr4.3:30368998-30369017 | None:intergenic | 45.0% | |
| GAGATATGCCTGGATCGTTT+CGG | - | chr4.3:30369812-30369831 | MS.gene031675:intron | 45.0% | |
| GAGGAGGTTGTTCCAAAAGA+AGG | - | chr4.3:30371121-30371140 | MS.gene031675:CDS | 45.0% | |
| GGAACAACCTCCTCATAGTT+GGG | + | chr4.3:30371115-30371134 | None:intergenic | 45.0% | |
| GGATTCTCAAGTCCATTTGG+TGG | - | chr4.3:30369877-30369896 | MS.gene031675:intron | 45.0% | |
| GGCTCATACGGTTTCTTCTT+CGG | + | chr4.3:30370423-30370442 | None:intergenic | 45.0% | |
| GGTATGAGATCAAGGTTCTC+TGG | - | chr4.3:30369928-30369947 | MS.gene031675:intron | 45.0% | |
| GTGCACTGTGTAACCAGTTA+AGG | + | chr4.3:30371038-30371057 | None:intergenic | 45.0% | |
| TATCCATCCCAACTATGAGG+AGG | - | chr4.3:30371105-30371124 | MS.gene031675:intron | 45.0% | |
| TATTCCACAGGAGATATGCC+TGG | - | chr4.3:30369802-30369821 | MS.gene031675:intron | 45.0% | |
| TCAGAAGATATCTCTTGCGG+AGG | - | chr4.3:30371012-30371031 | MS.gene031675:intron | 45.0% | |
| TGAGATCAAGGTTCTCTGGT+GGG | - | chr4.3:30369932-30369951 | MS.gene031675:intron | 45.0% | |
| TGGAACAACCTCCTCATAGT+TGG | + | chr4.3:30371116-30371135 | None:intergenic | 45.0% | |
| ! | CAAGTTGAGTTGCACTCTTG+AGG | - | chr4.3:30370047-30370066 | MS.gene031675:intron | 45.0% |
| ! | TCAAGTCCATTTGGTGGCAT+GGG | - | chr4.3:30369883-30369902 | MS.gene031675:intron | 45.0% |
| ! | TTTGTTGGATCTTTGGGGAG+TGG | + | chr4.3:30371151-30371170 | None:intergenic | 45.0% |
| !! | AGTGTTTAGTTTGTCGGTGG+AGG | - | chr4.3:30370602-30370621 | MS.gene031675:intron | 45.0% |
| !! | GTGTTTAGTTTGTCGGTGGA+GGG | - | chr4.3:30370603-30370622 | MS.gene031675:intron | 45.0% |
| !! | TTTGGGTCTTTTGGAGAAGG+AGG | - | chr4.3:30369973-30369992 | MS.gene031675:intron | 45.0% |
| !!! | CAAATAATTTTTTTTTATTT+GGG | - | chr4.3:30369633-30369652 | MS.gene031675:intron | 5.0% |
| !!! | TCAAATAATTTTTTTTTATT+TGG | - | chr4.3:30369632-30369651 | MS.gene031675:intron | 5.0% |
| AAAGATCACCTTCCCGGAGA+AGG | - | chr4.3:30370889-30370908 | MS.gene031675:intron | 50.0% | |
| AAGATCACCTTCCCGGAGAA+GGG | - | chr4.3:30370890-30370909 | MS.gene031675:intron | 50.0% | |
| ACAGCGTCTTCAGTCGTGAA+GGG | - | chr4.3:30370972-30370991 | MS.gene031675:intron | 50.0% | |
| AGATCTGCGGCGGTTACATT+TGG | + | chr4.3:30370926-30370945 | None:intergenic | 50.0% | |
| AGCAGGAGTTAGGAAACTCC+TGG | - | chr4.3:30371234-30371253 | MS.gene031675:CDS | 50.0% | |
| AGGTTCTCTGGTGGGATGTT+TGG | - | chr4.3:30369940-30369959 | MS.gene031675:intron | 50.0% | |
| ATATGAGTCCAGCTGCACCT+CGG | - | chr4.3:30370004-30370023 | MS.gene031675:intron | 50.0% | |
| CAACCTCCTCATAGTTGGGA+TGG | + | chr4.3:30371111-30371130 | None:intergenic | 50.0% | |
| CACAGTGCACCTCACTACAT+TGG | - | chr4.3:30371048-30371067 | MS.gene031675:intron | 50.0% | |
| CTTCTTCCAACCAGGCTTCA+CGG | + | chr4.3:30370864-30370883 | None:intergenic | 50.0% | |
| GATCGTTTCGGTTCAATCCG+AGG | - | chr4.3:30369824-30369843 | MS.gene031675:intron | 50.0% | |
| GGATTGAACCGAAACGATCC+AGG | + | chr4.3:30369823-30369842 | None:intergenic | 50.0% | |
| GTGAAGCCTGGTTGGAAGAA+GGG | - | chr4.3:30370863-30370882 | MS.gene031675:intron | 50.0% | |
| GTGCACCTCACTACATTGGA+TGG | - | chr4.3:30371052-30371071 | MS.gene031675:intron | 50.0% | |
| TAGGAAACTCCTGGCTTCCT+CGG | - | chr4.3:30371243-30371262 | MS.gene031675:CDS | 50.0% | |
| TCAATTGCAGGAGCTTTCCG+AGG | + | chr4.3:30370024-30370043 | None:intergenic | 50.0% | |
| TGAAGCCTGGTTGGAAGAAG+GGG | - | chr4.3:30370864-30370883 | MS.gene031675:intron | 50.0% | |
| TGTTCATCAGTGAGCCGAGT+AGG | + | chr4.3:30371211-30371230 | None:intergenic | 50.0% | |
| TTGACCATAACCGTGAAGCC+TGG | - | chr4.3:30370851-30370870 | MS.gene031675:intron | 50.0% | |
| TTTGTCCCCTTCTTCCAACC+AGG | + | chr4.3:30370872-30370891 | None:intergenic | 50.0% | |
| ! | CTCAAGTCCATTTGGTGGCA+TGG | - | chr4.3:30369882-30369901 | MS.gene031675:intron | 50.0% |
| ! | GGGAGTGGCATTCCTTCTTT+TGG | + | chr4.3:30371136-30371155 | None:intergenic | 50.0% |
| !! | GTGGTGGTGGTATGAGATCA+AGG | - | chr4.3:30369920-30369939 | MS.gene031675:intron | 50.0% |
| AGCATGGTCGGTCAGCTACA+TGG | + | chr4.3:30369494-30369513 | None:intergenic | 55.0% | |
| CAAGTTCCTCCTCCTGATGC+TGG | - | chr4.3:30369757-30369776 | MS.gene031675:intron | 55.0% | |
| CACAGCGTCTTCAGTCGTGA+AGG | - | chr4.3:30370971-30370990 | MS.gene031675:intron | 55.0% | |
| CCAACCAGGCTTCACGGTTA+TGG | + | chr4.3:30370858-30370877 | None:intergenic | 55.0% | |
| CCATAACCGTGAAGCCTGGT+TGG | - | chr4.3:30370855-30370874 | MS.gene031675:intron | 55.0% | |
| CGATCCAGGCATATCTCCTG+TGG | + | chr4.3:30369809-30369828 | None:intergenic | 55.0% | |
| CGTGAAGCCTGGTTGGAAGA+AGG | - | chr4.3:30370862-30370881 | MS.gene031675:intron | 55.0% | |
| CTTCCACCCATGCCACCAAA+TGG | + | chr4.3:30369892-30369911 | None:intergenic | 55.0% | |
| GAGGTGCAGCTGGACTCATA+TGG | + | chr4.3:30370005-30370024 | None:intergenic | 55.0% | |
| GCTGACCGACCATGCTTACT+TGG | - | chr4.3:30369498-30369517 | MS.gene031675:intron | 55.0% | |
| GGGGACAAAGATCACCTTCC+CGG | - | chr4.3:30370883-30370902 | MS.gene031675:intron | 55.0% | |
| TCACGACTGAAGACGCTGTG+TGG | + | chr4.3:30370971-30370990 | None:intergenic | 55.0% | |
| TCTCTTGCGGAGGCCTTAAC+TGG | - | chr4.3:30371022-30371041 | MS.gene031675:intron | 55.0% | |
| ! | AGTCCATTTGGTGGCATGGG+TGG | - | chr4.3:30369886-30369905 | MS.gene031675:intron | 55.0% |
| ! | TTTGGTGGCATGGGTGGAAG+AGG | - | chr4.3:30369892-30369911 | MS.gene031675:intron | 55.0% |
| !! | GGGTCTTTTGGAGAAGGAGG+AGG | - | chr4.3:30369976-30369995 | MS.gene031675:intron | 55.0% |
| CCACCTCCACTACCAGCATC+AGG | + | chr4.3:30369772-30369791 | None:intergenic | 60.0% | |
| CCACTACCAGCATCAGGAGG+AGG | + | chr4.3:30369766-30369785 | None:intergenic | 60.0% | |
| CCTCCACTACCAGCATCAGG+AGG | + | chr4.3:30369769-30369788 | None:intergenic | 60.0% | |
| CCTCCTCCTGATGCTGGTAG+TGG | - | chr4.3:30369763-30369782 | MS.gene031675:intron | 60.0% | |
| GCTGTTCGTTGCCCTTCTCC+GGG | + | chr4.3:30370904-30370923 | None:intergenic | 60.0% | |
| GGCTGTTCGTTGCCCTTCTC+CGG | + | chr4.3:30370905-30370924 | None:intergenic | 60.0% | |
| TTCGTTGCCCTTCTCCGGGA+AGG | + | chr4.3:30370900-30370919 | None:intergenic | 60.0% | |
| ! | ATGGGTGGAAGAGGTGGTGG+TGG | - | chr4.3:30369901-30369920 | MS.gene031675:intron | 60.0% |
| !! | CCTCCTGATGCTGGTAGTGG+AGG | - | chr4.3:30369766-30369785 | MS.gene031675:intron | 60.0% |
| !! | CCTGATGCTGGTAGTGGAGG+TGG | - | chr4.3:30369769-30369788 | MS.gene031675:intron | 60.0% |
| GGAGCTTTCCGAGGTGCAGC+TGG | + | chr4.3:30370015-30370034 | None:intergenic | 65.0% | |
| GGCATGGGTGGAAGAGGTGG+TGG | - | chr4.3:30369898-30369917 | MS.gene031675:intron | 65.0% | |
| GGTGGCATGGGTGGAAGAGG+TGG | - | chr4.3:30369895-30369914 | MS.gene031675:intron | 65.0% | |
| !! | GGAAGAGGTGGTGGTGGTGG+TGG | - | chr4.3:30369907-30369926 | MS.gene031675:intron | 65.0% |
| !! | GGTGGAAGAGGTGGTGGTGG+TGG | - | chr4.3:30369904-30369923 | MS.gene031675:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 30368952 | 30371270 | 30368952 | ID=MS.gene031675 |
| chr4.3 | mRNA | 30368952 | 30371270 | 30368952 | ID=MS.gene031675.t1;Parent=MS.gene031675 |
| chr4.3 | exon | 30371106 | 30371270 | 30371106 | ID=MS.gene031675.t1.exon1;Parent=MS.gene031675.t1 |
| chr4.3 | CDS | 30371106 | 30371270 | 30371106 | ID=cds.MS.gene031675.t1;Parent=MS.gene031675.t1 |
| chr4.3 | exon | 30370092 | 30370528 | 30370092 | ID=MS.gene031675.t1.exon2;Parent=MS.gene031675.t1 |
| chr4.3 | CDS | 30370092 | 30370528 | 30370092 | ID=cds.MS.gene031675.t1;Parent=MS.gene031675.t1 |
| chr4.3 | exon | 30368952 | 30369396 | 30368952 | ID=MS.gene031675.t1.exon3;Parent=MS.gene031675.t1 |
| chr4.3 | CDS | 30368952 | 30369396 | 30368952 | ID=cds.MS.gene031675.t1;Parent=MS.gene031675.t1 |
| Gene Sequence |
| Protein sequence |
