Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75767.t1 | AES73721.1 | 98.5 | 327 | 5 | 0 | 1 | 327 | 1 | 327 | 2.80E-181 | 644.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75767.t1 | Q9D832 | 44.4 | 340 | 168 | 8 | 1 | 325 | 1 | 334 | 6.3e-65 | 249.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75767.t1 | G7JBQ5 | 98.5 | 327 | 5 | 0 | 1 | 327 | 1 | 327 | 2.0e-181 | 644.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene01038 | MS.gene75767 | PPI |
| MS.gene75767 | MS.gene063165 | PPI |
| MS.gene002499 | MS.gene75767 | PPI |
| MS.gene68222 | MS.gene75767 | PPI |
| MS.gene75767 | MS.gene50004 | PPI |
| MS.gene031675 | MS.gene75767 | PPI |
| MS.gene045555 | MS.gene75767 | PPI |
| MS.gene006630 | MS.gene75767 | PPI |
| MS.gene01472 | MS.gene75767 | PPI |
| MS.gene064894 | MS.gene75767 | PPI |
| MS.gene75767 | MS.gene014281 | PPI |
| MS.gene50013 | MS.gene75767 | PPI |
| MS.gene75767 | MS.gene037465 | PPI |
| MS.gene047354 | MS.gene75767 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75767.t1 | MTR_3g108020 | 98.471 | 327 | 5 | 0 | 1 | 327 | 1 | 327 | 0.0 | 660 |
| MS.gene75767.t1 | MTR_4g015840 | 56.891 | 341 | 128 | 5 | 1 | 325 | 1 | 338 | 6.08e-128 | 369 |
| MS.gene75767.t1 | MTR_2g014470 | 56.637 | 339 | 134 | 5 | 1 | 326 | 1 | 339 | 5.05e-127 | 367 |
| MS.gene75767.t1 | MTR_2g090705 | 54.942 | 344 | 130 | 6 | 1 | 327 | 1 | 336 | 3.79e-125 | 362 |
| MS.gene75767.t1 | MTR_4g078850 | 54.755 | 347 | 133 | 8 | 1 | 326 | 1 | 344 | 2.30e-123 | 358 |
| MS.gene75767.t1 | MTR_2g014480 | 51.190 | 336 | 144 | 6 | 1 | 316 | 1 | 336 | 1.78e-107 | 317 |
| MS.gene75767.t1 | MTR_5g037880 | 42.553 | 329 | 123 | 4 | 4 | 325 | 5 | 274 | 4.95e-82 | 250 |
| MS.gene75767.t1 | MTR_4g015840 | 53.909 | 243 | 104 | 3 | 88 | 325 | 22 | 261 | 3.19e-81 | 248 |
| MS.gene75767.t1 | MTR_7g109340 | 34.251 | 327 | 201 | 7 | 5 | 326 | 27 | 344 | 2.15e-53 | 179 |
| MS.gene75767.t1 | MTR_3g437840 | 47.205 | 161 | 83 | 2 | 166 | 325 | 2 | 161 | 3.35e-46 | 154 |
| MS.gene75767.t1 | MTR_3g088140 | 43.931 | 173 | 96 | 1 | 148 | 319 | 175 | 347 | 1.55e-45 | 158 |
| MS.gene75767.t1 | MTR_3g437360 | 46.707 | 167 | 87 | 2 | 145 | 309 | 172 | 338 | 3.71e-45 | 157 |
| MS.gene75767.t1 | MTR_2g006890 | 42.564 | 195 | 107 | 2 | 129 | 318 | 174 | 368 | 1.69e-43 | 154 |
| MS.gene75767.t1 | MTR_8g006430 | 29.457 | 387 | 168 | 10 | 5 | 325 | 15 | 362 | 1.30e-32 | 125 |
| MS.gene75767.t1 | MTR_3g087030 | 29.345 | 351 | 201 | 12 | 3 | 318 | 81 | 419 | 9.11e-31 | 120 |
| MS.gene75767.t1 | MTR_3g437850 | 36.453 | 203 | 70 | 5 | 3 | 182 | 1 | 167 | 6.01e-30 | 112 |
| MS.gene75767.t1 | MTR_5g065160 | 27.841 | 352 | 207 | 11 | 4 | 322 | 83 | 420 | 2.86e-25 | 105 |
| MS.gene75767.t1 | MTR_5g065160 | 27.841 | 352 | 207 | 11 | 4 | 322 | 82 | 419 | 2.93e-25 | 105 |
| MS.gene75767.t1 | MTR_5g065160 | 27.841 | 352 | 207 | 11 | 4 | 322 | 83 | 420 | 5.33e-25 | 105 |
| MS.gene75767.t1 | MTR_5g065160 | 27.841 | 352 | 207 | 11 | 4 | 322 | 76 | 413 | 5.38e-25 | 105 |
| MS.gene75767.t1 | MTR_3g027580 | 27.003 | 337 | 217 | 10 | 4 | 318 | 89 | 418 | 7.27e-23 | 99.0 |
| MS.gene75767.t1 | MTR_2g087660 | 34.965 | 143 | 91 | 1 | 185 | 325 | 216 | 358 | 1.96e-21 | 94.4 |
| MS.gene75767.t1 | MTR_4g023470 | 27.381 | 336 | 218 | 10 | 5 | 318 | 87 | 418 | 2.58e-20 | 91.3 |
| MS.gene75767.t1 | MTR_4g050420 | 32.867 | 143 | 94 | 1 | 185 | 325 | 214 | 356 | 7.79e-19 | 87.0 |
| MS.gene75767.t1 | MTR_7g112360 | 36.552 | 145 | 68 | 5 | 5 | 129 | 17 | 157 | 1.52e-18 | 81.6 |
| MS.gene75767.t1 | MTR_7g101070 | 53.846 | 65 | 30 | 0 | 4 | 68 | 358 | 422 | 1.77e-18 | 86.3 |
| MS.gene75767.t1 | MTR_7g112360 | 53.030 | 66 | 28 | 1 | 5 | 67 | 17 | 82 | 6.36e-18 | 78.6 |
| MS.gene75767.t1 | MTR_2g104030 | 41.818 | 110 | 58 | 2 | 4 | 113 | 70 | 173 | 1.24e-16 | 80.9 |
| MS.gene75767.t1 | MTR_1g029460 | 43.137 | 102 | 44 | 4 | 3 | 103 | 5 | 93 | 8.54e-15 | 75.1 |
| MS.gene75767.t1 | MTR_5g065860 | 51.562 | 64 | 30 | 1 | 4 | 67 | 48 | 110 | 1.20e-14 | 70.5 |
| MS.gene75767.t1 | MTR_4g085070 | 43.210 | 81 | 39 | 2 | 11 | 88 | 19 | 95 | 1.81e-14 | 70.5 |
| MS.gene75767.t1 | MTR_1g110310 | 47.887 | 71 | 36 | 1 | 4 | 74 | 16 | 85 | 2.87e-14 | 73.6 |
| MS.gene75767.t1 | MTR_8g022310 | 43.478 | 69 | 34 | 1 | 4 | 67 | 10 | 78 | 1.70e-13 | 68.9 |
| MS.gene75767.t1 | MTR_8g022310 | 43.478 | 69 | 34 | 1 | 4 | 67 | 10 | 78 | 2.81e-13 | 68.9 |
| MS.gene75767.t1 | MTR_8g022310 | 43.478 | 69 | 34 | 1 | 4 | 67 | 10 | 78 | 3.03e-13 | 67.8 |
| MS.gene75767.t1 | MTR_8g022310 | 43.478 | 69 | 34 | 1 | 4 | 67 | 10 | 78 | 3.37e-13 | 68.2 |
| MS.gene75767.t1 | MTR_1g052110 | 46.154 | 65 | 34 | 1 | 6 | 70 | 40 | 103 | 4.95e-13 | 68.9 |
| MS.gene75767.t1 | MTR_5g035770 | 46.250 | 80 | 41 | 2 | 4 | 83 | 25 | 102 | 5.04e-13 | 69.7 |
| MS.gene75767.t1 | MTR_5g012530 | 43.243 | 74 | 40 | 1 | 4 | 75 | 12 | 85 | 5.16e-13 | 70.1 |
| MS.gene75767.t1 | MTR_6g027110 | 40.000 | 75 | 41 | 1 | 3 | 73 | 1 | 75 | 9.54e-13 | 65.1 |
| MS.gene75767.t1 | MTR_7g069480 | 44.286 | 70 | 37 | 1 | 3 | 72 | 26 | 93 | 1.17e-12 | 68.9 |
| MS.gene75767.t1 | MTR_5g004570 | 40.000 | 100 | 48 | 3 | 4 | 103 | 6 | 93 | 1.65e-12 | 66.6 |
| MS.gene75767.t1 | MTR_2g087660 | 32.353 | 102 | 67 | 1 | 185 | 284 | 216 | 317 | 1.96e-12 | 67.4 |
| MS.gene75767.t1 | MTR_6g027030 | 41.333 | 75 | 40 | 1 | 3 | 73 | 1 | 75 | 3.91e-12 | 65.1 |
| MS.gene75767.t1 | MTR_7g092380 | 43.077 | 65 | 36 | 1 | 6 | 70 | 24 | 87 | 5.18e-12 | 65.9 |
| MS.gene75767.t1 | MTR_8g037810 | 39.216 | 102 | 59 | 2 | 5 | 106 | 7 | 105 | 8.44e-12 | 65.5 |
| MS.gene75767.t1 | MTR_6g026940 | 43.077 | 65 | 33 | 1 | 3 | 63 | 1 | 65 | 2.85e-11 | 62.0 |
| MS.gene75767.t1 | MTR_8g081620 | 40.845 | 71 | 41 | 1 | 5 | 74 | 61 | 131 | 3.22e-11 | 62.0 |
| MS.gene75767.t1 | MTR_3g100330 | 44.776 | 67 | 34 | 2 | 3 | 68 | 68 | 132 | 6.62e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75767.t1 | AT5G25530 | 68.732 | 339 | 94 | 3 | 1 | 327 | 1 | 339 | 6.61e-161 | 452 |
| MS.gene75767.t1 | AT5G25530 | 66.859 | 347 | 95 | 4 | 1 | 327 | 1 | 347 | 3.81e-158 | 446 |
| MS.gene75767.t1 | AT3G08910 | 55.060 | 336 | 124 | 4 | 1 | 325 | 1 | 320 | 2.28e-126 | 364 |
| MS.gene75767.t1 | AT5G01390 | 56.140 | 342 | 124 | 6 | 1 | 325 | 1 | 333 | 4.32e-126 | 364 |
| MS.gene75767.t1 | AT1G10350 | 54.728 | 349 | 135 | 4 | 1 | 327 | 1 | 348 | 1.28e-125 | 363 |
| MS.gene75767.t1 | AT2G20560 | 55.718 | 341 | 132 | 6 | 1 | 326 | 1 | 337 | 1.91e-125 | 363 |
| MS.gene75767.t1 | AT1G59725 | 54.094 | 342 | 130 | 5 | 1 | 327 | 1 | 330 | 3.47e-121 | 352 |
| MS.gene75767.t1 | AT4G28480 | 55.172 | 348 | 134 | 3 | 1 | 326 | 1 | 348 | 6.43e-121 | 352 |
| MS.gene75767.t1 | AT3G47940 | 50.140 | 357 | 139 | 4 | 1 | 327 | 1 | 348 | 3.69e-115 | 337 |
| MS.gene75767.t1 | AT5G01390 | 49.254 | 335 | 100 | 5 | 1 | 325 | 1 | 275 | 2.93e-103 | 304 |
| MS.gene75767.t1 | AT4G28480 | 48.012 | 327 | 132 | 5 | 1 | 326 | 1 | 290 | 1.08e-95 | 285 |
| MS.gene75767.t1 | AT5G01390 | 41.493 | 335 | 87 | 6 | 1 | 325 | 1 | 236 | 3.48e-74 | 229 |
| MS.gene75767.t1 | AT2G20550 | 43.643 | 291 | 126 | 6 | 63 | 326 | 5 | 284 | 4.11e-69 | 217 |
| MS.gene75767.t1 | AT2G20550 | 43.643 | 291 | 126 | 6 | 63 | 326 | 5 | 284 | 4.11e-69 | 217 |
| MS.gene75767.t1 | AT5G01390 | 53.886 | 193 | 75 | 5 | 1 | 182 | 1 | 190 | 8.11e-60 | 192 |
| MS.gene75767.t1 | AT1G44160 | 48.315 | 178 | 92 | 0 | 148 | 325 | 176 | 353 | 2.70e-51 | 174 |
| MS.gene75767.t1 | AT1G11040 | 45.000 | 180 | 99 | 0 | 146 | 325 | 253 | 432 | 3.30e-47 | 165 |
| MS.gene75767.t1 | AT3G62600 | 29.444 | 360 | 182 | 6 | 2 | 326 | 24 | 346 | 9.78e-44 | 154 |
| MS.gene75767.t1 | AT2G22360 | 27.168 | 346 | 212 | 12 | 4 | 318 | 86 | 422 | 7.73e-24 | 101 |
| MS.gene75767.t1 | AT5G22060 | 37.063 | 143 | 88 | 1 | 185 | 325 | 217 | 359 | 2.91e-23 | 99.8 |
| MS.gene75767.t1 | AT5G22060 | 33.178 | 214 | 103 | 3 | 5 | 218 | 15 | 188 | 7.59e-17 | 81.3 |
| MS.gene75767.t1 | AT3G44110 | 36.364 | 143 | 89 | 1 | 185 | 325 | 216 | 358 | 1.26e-21 | 95.1 |
| MS.gene75767.t1 | AT1G28210 | 25.501 | 349 | 215 | 11 | 4 | 322 | 48 | 381 | 2.03e-19 | 88.6 |
| MS.gene75767.t1 | AT1G28210 | 25.501 | 349 | 215 | 11 | 4 | 322 | 48 | 381 | 2.26e-19 | 88.6 |
| MS.gene75767.t1 | AT1G28210 | 25.501 | 349 | 215 | 11 | 4 | 322 | 48 | 381 | 2.62e-19 | 88.6 |
| MS.gene75767.t1 | AT1G80030 | 44.762 | 105 | 52 | 2 | 4 | 108 | 75 | 173 | 5.94e-18 | 84.7 |
| MS.gene75767.t1 | AT1G80030 | 44.762 | 105 | 52 | 2 | 4 | 108 | 75 | 173 | 7.48e-18 | 84.3 |
| MS.gene75767.t1 | AT1G80030 | 44.762 | 105 | 52 | 2 | 4 | 108 | 75 | 173 | 7.48e-18 | 84.3 |
| MS.gene75767.t1 | AT1G80030 | 44.762 | 105 | 52 | 2 | 4 | 108 | 75 | 173 | 7.48e-18 | 84.3 |
| MS.gene75767.t1 | AT3G17830 | 54.054 | 74 | 32 | 1 | 2 | 75 | 61 | 132 | 1.34e-17 | 84.0 |
| MS.gene75767.t1 | AT1G56300 | 54.545 | 66 | 27 | 1 | 5 | 67 | 14 | 79 | 1.48e-17 | 77.8 |
| MS.gene75767.t1 | AT1G56300 | 54.545 | 66 | 27 | 1 | 5 | 67 | 14 | 79 | 2.07e-17 | 78.6 |
| MS.gene75767.t1 | AT4G39960 | 51.389 | 72 | 33 | 1 | 4 | 75 | 85 | 154 | 1.18e-16 | 80.9 |
| MS.gene75767.t1 | AT4G39960 | 51.389 | 72 | 33 | 1 | 4 | 75 | 85 | 154 | 1.18e-16 | 80.9 |
| MS.gene75767.t1 | AT5G48030 | 46.053 | 76 | 40 | 1 | 4 | 79 | 94 | 168 | 3.55e-16 | 79.3 |
| MS.gene75767.t1 | AT5G16650 | 52.239 | 67 | 31 | 1 | 4 | 70 | 11 | 76 | 2.08e-15 | 73.2 |
| MS.gene75767.t1 | AT5G16650 | 52.239 | 67 | 31 | 1 | 4 | 70 | 11 | 76 | 2.52e-15 | 72.0 |
| MS.gene75767.t1 | AT1G68370 | 47.887 | 71 | 36 | 1 | 4 | 74 | 17 | 86 | 1.62e-14 | 74.3 |
| MS.gene75767.t1 | AT2G41000 | 39.326 | 89 | 50 | 1 | 3 | 87 | 2 | 90 | 1.74e-14 | 71.6 |
| MS.gene75767.t1 | AT5G03160 | 46.154 | 65 | 35 | 0 | 4 | 68 | 370 | 434 | 2.25e-14 | 73.9 |
| MS.gene75767.t1 | AT1G59980 | 43.478 | 69 | 38 | 1 | 6 | 74 | 25 | 92 | 4.42e-14 | 72.8 |
| MS.gene75767.t1 | AT3G44110 | 34.513 | 113 | 72 | 1 | 185 | 295 | 216 | 328 | 4.95e-14 | 72.4 |
| MS.gene75767.t1 | AT2G41000 | 39.326 | 89 | 50 | 1 | 3 | 87 | 2 | 90 | 7.25e-14 | 69.3 |
| MS.gene75767.t1 | AT1G59980 | 43.478 | 69 | 38 | 1 | 6 | 74 | 25 | 92 | 9.44e-14 | 72.0 |
| MS.gene75767.t1 | AT1G71000 | 48.485 | 66 | 31 | 1 | 5 | 67 | 9 | 74 | 3.00e-13 | 67.4 |
| MS.gene75767.t1 | AT1G21080 | 41.584 | 101 | 46 | 3 | 3 | 103 | 5 | 92 | 3.46e-13 | 70.1 |
| MS.gene75767.t1 | AT1G21080 | 41.584 | 101 | 46 | 3 | 3 | 103 | 5 | 92 | 3.71e-13 | 70.1 |
| MS.gene75767.t1 | AT1G71000 | 48.485 | 66 | 31 | 1 | 5 | 67 | 9 | 74 | 3.76e-13 | 67.0 |
| MS.gene75767.t1 | AT2G21510 | 36.111 | 108 | 66 | 2 | 4 | 111 | 6 | 110 | 4.54e-13 | 69.7 |
| MS.gene75767.t1 | AT2G21510 | 36.111 | 108 | 66 | 2 | 4 | 111 | 6 | 110 | 4.54e-13 | 69.7 |
| MS.gene75767.t1 | AT2G21510 | 36.111 | 108 | 66 | 2 | 4 | 111 | 6 | 110 | 5.39e-13 | 69.3 |
| MS.gene75767.t1 | AT2G21510 | 36.111 | 108 | 66 | 2 | 4 | 111 | 6 | 110 | 5.68e-13 | 69.3 |
| MS.gene75767.t1 | AT2G21510 | 36.111 | 108 | 66 | 2 | 4 | 111 | 6 | 110 | 5.68e-13 | 69.3 |
| MS.gene75767.t1 | AT5G06910 | 46.154 | 65 | 34 | 1 | 6 | 70 | 31 | 94 | 1.09e-12 | 67.8 |
| MS.gene75767.t1 | AT5G05750 | 36.697 | 109 | 62 | 2 | 4 | 107 | 114 | 220 | 1.67e-12 | 67.4 |
| MS.gene75767.t1 | AT2G33735 | 43.077 | 65 | 36 | 1 | 4 | 68 | 22 | 85 | 2.23e-12 | 63.5 |
| MS.gene75767.t1 | AT2G33735 | 43.077 | 65 | 36 | 1 | 4 | 68 | 22 | 85 | 2.23e-12 | 63.5 |
| MS.gene75767.t1 | AT1G24120 | 42.500 | 80 | 44 | 2 | 4 | 83 | 20 | 97 | 3.93e-12 | 67.0 |
| MS.gene75767.t1 | AT1G76700 | 39.604 | 101 | 49 | 3 | 3 | 103 | 5 | 93 | 6.10e-12 | 66.6 |
| MS.gene75767.t1 | AT4G39150 | 34.259 | 108 | 68 | 2 | 4 | 111 | 6 | 110 | 6.24e-12 | 66.2 |
| MS.gene75767.t1 | AT4G39150 | 34.259 | 108 | 68 | 2 | 4 | 111 | 6 | 110 | 6.24e-12 | 66.2 |
| MS.gene75767.t1 | AT4G39150 | 34.259 | 108 | 68 | 2 | 4 | 111 | 6 | 110 | 6.24e-12 | 66.2 |
| MS.gene75767.t1 | AT5G49060 | 47.761 | 67 | 33 | 1 | 4 | 70 | 99 | 163 | 6.34e-12 | 66.2 |
| MS.gene75767.t1 | AT5G49060 | 47.761 | 67 | 33 | 1 | 4 | 70 | 99 | 163 | 6.34e-12 | 66.2 |
| MS.gene75767.t1 | AT4G13830 | 39.726 | 73 | 43 | 1 | 3 | 74 | 65 | 137 | 1.78e-11 | 62.0 |
| MS.gene75767.t1 | AT4G13830 | 39.726 | 73 | 43 | 1 | 3 | 74 | 65 | 137 | 2.09e-11 | 62.4 |
| MS.gene75767.t1 | AT2G35720 | 39.726 | 73 | 42 | 1 | 4 | 74 | 15 | 87 | 5.64e-11 | 63.9 |
Find 79 sgRNAs with CRISPR-Local
Find 144 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACTTGGTGACTCAGTTTC+TGG | 0.142352 | 3.1:+85852927 | None:intergenic |
| GGAAGTAGTCCCTTGAATTT+TGG | 0.174079 | 3.1:-85852861 | MS.gene75767:CDS |
| ATTAGTTGATTCCCTTTATC+TGG | 0.206300 | 3.1:+85852036 | None:intergenic |
| TGACCGGGTTCCTTTGTTAT+TGG | 0.230224 | 3.1:+85851790 | None:intergenic |
| AAGATATCTTCTGCACTTCT+TGG | 0.243008 | 3.1:+85852897 | None:intergenic |
| GATATCTTTGCAGAATTCTT+TGG | 0.257479 | 3.1:-85852882 | MS.gene75767:CDS |
| AGTTTGGAGGAGTTGTATTC+TGG | 0.261924 | 3.1:-85852690 | MS.gene75767:CDS |
| AAGATAACATTCCCAGATAA+AGG | 0.288781 | 3.1:-85852048 | MS.gene75767:CDS |
| GACTAAATTGCCTTGTAGTT+TGG | 0.302178 | 3.1:-85852706 | MS.gene75767:CDS |
| TCAACAGGCGGTGGTTTCTT+TGG | 0.314972 | 3.1:+85852729 | None:intergenic |
| TTATTGTTAGGGTTCTTGTC+AGG | 0.339068 | 3.1:+85853408 | None:intergenic |
| TTTAGTGCAGCACGTTGTTC+TGG | 0.340516 | 3.1:+85851715 | None:intergenic |
| TAACAAAGGAACCCGGTCAT+AGG | 0.345303 | 3.1:-85851786 | MS.gene75767:CDS |
| TCATAAACATTCCTTCTTTG+AGG | 0.371333 | 3.1:+85852987 | None:intergenic |
| CTCAGAGATCTGTTTGAAAC+GGG | 0.404431 | 3.1:+85853371 | None:intergenic |
| ATAGAAAATTGGCTATGAAA+TGG | 0.433354 | 3.1:-85853434 | MS.gene75767:CDS |
| ACCATCAGATGGAAATCTCT+TGG | 0.438047 | 3.1:+85852818 | None:intergenic |
| TATTGTTAGGGTTCTTGTCA+GGG | 0.438705 | 3.1:+85853409 | None:intergenic |
| AACAAAGGAACCCGGTCATA+GGG | 0.440148 | 3.1:-85851785 | MS.gene75767:CDS |
| GAGCTTCTTGTTGCTAATGA+AGG | 0.446383 | 3.1:-85851817 | MS.gene75767:CDS |
| AGATAACATTCCCAGATAAA+GGG | 0.448544 | 3.1:-85852047 | MS.gene75767:CDS |
| ATCACAAATACAAGATCTGC+TGG | 0.449360 | 3.1:+85852003 | None:intergenic |
| CAAGGCAATTTAGTCTCAAC+AGG | 0.460386 | 3.1:+85852714 | None:intergenic |
| TTTGTTCCTTTCTTCCATCC+CGG | 0.465213 | 3.1:+85852069 | None:intergenic |
| TAAATTGCCTTGTAGTTTGG+AGG | 0.472522 | 3.1:-85852703 | MS.gene75767:CDS |
| TGCTGCACTAAAGCGAGCAT+TGG | 0.473058 | 3.1:-85851704 | MS.gene75767:CDS |
| TTTCCATCTGATGGTGGAGC+AGG | 0.478052 | 3.1:-85852810 | MS.gene75767:CDS |
| GGTGACTCAGTTTCTGGTGA+TGG | 0.483765 | 3.1:+85852933 | None:intergenic |
| CATGAATTGTTCAAGAGAGA+TGG | 0.486072 | 3.1:-85851967 | MS.gene75767:CDS |
| TGATTTGAGGATCATATTTG+AGG | 0.486195 | 3.1:-85851761 | MS.gene75767:CDS |
| CCTCAAATCACCCCTATGAC+CGG | 0.487277 | 3.1:+85851774 | None:intergenic |
| ATTAAGCATTGAAGTAAAGC+CGG | 0.489224 | 3.1:-85852088 | MS.gene75767:CDS |
| ATATCACTAGCAGAAGCTAT+TGG | 0.492007 | 3.1:-85851919 | MS.gene75767:CDS |
| TTAGTTGATTCCCTTTATCT+GGG | 0.493209 | 3.1:+85852037 | None:intergenic |
| CCTCAGAGATCTGTTTGAAA+CGG | 0.493838 | 3.1:+85853370 | None:intergenic |
| CAAACGTAGTTTAAGTGTCC+CGG | 0.507158 | 3.1:-85851866 | MS.gene75767:CDS |
| GAGAACAAGGGTTAAAAGAA+AGG | 0.512568 | 3.1:-85852956 | MS.gene75767:CDS |
| GCTGCACTAAAGCGAGCATT+GGG | 0.516052 | 3.1:-85851703 | MS.gene75767:CDS |
| ATACAAGATCTGCTGGAAGT+TGG | 0.521115 | 3.1:+85852010 | None:intergenic |
| TTAAGCATTGAAGTAAAGCC+GGG | 0.521592 | 3.1:-85852087 | MS.gene75767:CDS |
| TCTGATGGTGGAGCAGGAAA+TGG | 0.522820 | 3.1:-85852804 | MS.gene75767:CDS |
| GGAAATCTCTTGGACCTCCC+TGG | 0.526253 | 3.1:+85852828 | None:intergenic |
| AGGAATGTTTATGATCAGCT+TGG | 0.530957 | 3.1:-85852978 | MS.gene75767:CDS |
| TATGATCAGCTTGGAGAACA+AGG | 0.535520 | 3.1:-85852969 | MS.gene75767:CDS |
| ATGAATTGTTCAAGAGAGAT+GGG | 0.537623 | 3.1:-85851966 | MS.gene75767:CDS |
| GTAAAGCCGGGATGGAAGAA+AGG | 0.539331 | 3.1:-85852075 | MS.gene75767:CDS |
| AGAAAGAAAGAAAATGGGTG+TGG | 0.540206 | 3.1:-85853517 | None:intergenic |
| AGGACAGTAGTGGATTCCTA+CGG | 0.543187 | 3.1:-85852642 | MS.gene75767:CDS |
| TCCAAGAGATTTCCATCTGA+TGG | 0.546102 | 3.1:-85852819 | MS.gene75767:CDS |
| CAAGGAAAATGAAGATCTCA+AGG | 0.549083 | 3.1:-85852662 | MS.gene75767:CDS |
| AGTTGTATTCTGGTTCTACA+AGG | 0.550537 | 3.1:-85852680 | MS.gene75767:CDS |
| TCCAGATGATCCAAAATTCA+AGG | 0.552821 | 3.1:+85852851 | None:intergenic |
| CTTCTTGGATAAAATCCACT+TGG | 0.564609 | 3.1:+85852912 | None:intergenic |
| CTCAAATCACCCCTATGACC+GGG | 0.566792 | 3.1:+85851775 | None:intergenic |
| TTTCCTGCTCCACCATCAGA+TGG | 0.569001 | 3.1:+85852807 | None:intergenic |
| TACAACTCCTCCAAACTACA+AGG | 0.576940 | 3.1:+85852696 | None:intergenic |
| TATTGAGTGATCCTCAAAGA+AGG | 0.581960 | 3.1:-85852998 | MS.gene75767:CDS |
| GAAGATCTCAAGGACAGTAG+TGG | 0.582736 | 3.1:-85852652 | MS.gene75767:CDS |
| CCGGTCATAGGGGTGATTTG+AGG | 0.587567 | 3.1:-85851774 | MS.gene75767:CDS |
| AATTTAGTCTCAACAGGCGG+TGG | 0.590412 | 3.1:+85852720 | None:intergenic |
| GCATTGAAGTAAAGCCGGGA+TGG | 0.596425 | 3.1:-85852083 | MS.gene75767:CDS |
| TCACTAGCAGAAGCTATTGG+TGG | 0.596975 | 3.1:-85851916 | MS.gene75767:CDS |
| ACAGATCTCTGAGGCTTATG+CGG | 0.606049 | 3.1:-85853361 | MS.gene75767:intron |
| GGACAGTAGTGGATTCCTAC+GGG | 0.608784 | 3.1:-85852641 | MS.gene75767:intron |
| GCAGGAAATGGTGGATTCAG+CGG | 0.614762 | 3.1:-85852792 | MS.gene75767:CDS |
| CCAGATGATCCAAAATTCAA+GGG | 0.617332 | 3.1:+85852852 | None:intergenic |
| GATGGTGGAGCAGGAAATGG+TGG | 0.627146 | 3.1:-85852801 | MS.gene75767:CDS |
| ATGATCAGCTTGGAGAACAA+GGG | 0.627749 | 3.1:-85852968 | MS.gene75767:CDS |
| TGAAGGAATGCCAATAACAA+AGG | 0.628931 | 3.1:-85851800 | MS.gene75767:CDS |
| GCACTAAAGCGAGCATTGGG+TGG | 0.634751 | 3.1:-85851700 | MS.gene75767:CDS |
| CCAGAAACTGAGTCACCAAG+TGG | 0.638580 | 3.1:-85852927 | MS.gene75767:CDS |
| GCAACAAGAAGCTCATAACC+AGG | 0.643670 | 3.1:+85851826 | None:intergenic |
| TCTCTCTTGAACAATTCATG+AGG | 0.646574 | 3.1:+85851970 | None:intergenic |
| AAGAGATTTCCATCTGATGG+TGG | 0.651360 | 3.1:-85852816 | MS.gene75767:CDS |
| ACAAAGGAACCCGGTCATAG+GGG | 0.665969 | 3.1:-85851784 | MS.gene75767:CDS |
| CCGTTTCAAACAGATCTCTG+AGG | 0.684168 | 3.1:-85853370 | MS.gene75767:CDS |
| GGCAATTTAGTCTCAACAGG+CGG | 0.684270 | 3.1:+85852717 | None:intergenic |
| ATGCCAATAACAAAGGAACC+CGG | 0.688633 | 3.1:-85851793 | MS.gene75767:CDS |
| TTGGATCATCTGGACCAGGG+AGG | 0.719770 | 3.1:-85852842 | MS.gene75767:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTGAAAAAAAGAAAAGA+TGG | + | chr3.1:85851880-85851899 | None:intergenic | 15.0% |
| !! | AATTGAAAAAAAGAAAAGAT+GGG | + | chr3.1:85851879-85851898 | None:intergenic | 15.0% |
| !! | ATAATTAAATTCCCTAATAA+AGG | + | chr3.1:85851904-85851923 | None:intergenic | 15.0% |
| !! | ATACTCATGATTAAATTAAT+AGG | + | chr3.1:85852988-85853007 | None:intergenic | 15.0% |
| !! | TTATAACAAAAGATAAGATA+AGG | + | chr3.1:85852864-85852883 | None:intergenic | 15.0% |
| !!! | GAGAAATTTTTATGAATTTT+AGG | - | chr3.1:85852179-85852198 | MS.gene75767:intron | 15.0% |
| !!! | TTTTCAATTTTCCTTTATTA+GGG | - | chr3.1:85851890-85851909 | MS.gene75767:CDS | 15.0% |
| !!! | TTTTTCAATTTTCCTTTATT+AGG | - | chr3.1:85851889-85851908 | MS.gene75767:CDS | 15.0% |
| !! | AAATGAATCACAAAATGTTA+GGG | - | chr3.1:85852041-85852060 | MS.gene75767:CDS | 20.0% |
| !! | AACAAAAAACACAACAATAA+AGG | + | chr3.1:85852677-85852696 | None:intergenic | 20.0% |
| !! | ATTGAAAAAAAGAAAAGATG+GGG | + | chr3.1:85851878-85851897 | None:intergenic | 20.0% |
| !! | GCTTATAGTTTATATGAAAA+TGG | - | chr3.1:85852833-85852852 | MS.gene75767:CDS | 20.0% |
| !! | GTTGTTTATATAATATGCTT+GGG | - | chr3.1:85852694-85852713 | MS.gene75767:CDS | 20.0% |
| !! | TAAAGGTTCATATAATAAGT+TGG | + | chr3.1:85852660-85852679 | None:intergenic | 20.0% |
| !! | TAAATGAATCACAAAATGTT+AGG | - | chr3.1:85852040-85852059 | MS.gene75767:CDS | 20.0% |
| !!! | AAGATGTTTGTTTGTTTTAT+GGG | - | chr3.1:85853020-85853039 | MS.gene75767:intron | 20.0% |
| !!! | ATATCTTTTGATTCACAATA+AGG | + | chr3.1:85853265-85853284 | None:intergenic | 20.0% |
| !!! | GAAAAAAGCATATAGAAAAT+TGG | - | chr3.1:85851755-85851774 | MS.gene75767:CDS | 20.0% |
| !!! | TATGAAAACAAGTTGAAAAT+AGG | + | chr3.1:85852787-85852806 | None:intergenic | 20.0% |
| !!! | TGATATTATTTTGCAATACA+TGG | - | chr3.1:85851971-85851990 | MS.gene75767:CDS | 20.0% |
| !!! | TGTTGTTTATATAATATGCT+TGG | - | chr3.1:85852693-85852712 | MS.gene75767:CDS | 20.0% |
| !!! | TTCATATAATAAGTTGGATT+GGG | + | chr3.1:85852654-85852673 | None:intergenic | 20.0% |
| ! | ATAGAAAATTGGCTATGAAA+TGG | - | chr3.1:85851766-85851785 | MS.gene75767:CDS | 25.0% |
| ! | GGTATATAACTTCTTTGATA+CGG | + | chr3.1:85852126-85852145 | None:intergenic | 25.0% |
| ! | TTAAACTGATTATCCAAACA+AGG | - | chr3.1:85852929-85852948 | MS.gene75767:CDS | 25.0% |
| ! | TTCATATAGGAAAATGTTAG+TGG | - | chr3.1:85852070-85852089 | MS.gene75767:CDS | 25.0% |
| ! | TTTATATAATATGCTTGGGT+TGG | - | chr3.1:85852698-85852717 | MS.gene75767:CDS | 25.0% |
| !! | GGATTACTATAACATTTTGA+AGG | - | chr3.1:85851704-85851723 | MS.gene75767:CDS | 25.0% |
| !! | GTTCATATAATAAGTTGGAT+TGG | + | chr3.1:85852655-85852674 | None:intergenic | 25.0% |
| !! | TTTTATGTCATGGTAGAAAT+TGG | - | chr3.1:85852003-85852022 | MS.gene75767:CDS | 25.0% |
| !!! | ATGTTAGTGGTTAATTTGTT+AGG | - | chr3.1:85852083-85852102 | MS.gene75767:CDS | 25.0% |
| !!! | ATTATTTTGCAATACATGGA+GGG | - | chr3.1:85851975-85851994 | MS.gene75767:CDS | 25.0% |
| !!! | CAAGATGTTTGTTTGTTTTA+TGG | - | chr3.1:85853019-85853038 | MS.gene75767:intron | 25.0% |
| !!! | CAGCTTCTTTTTTATTGTTA+GGG | + | chr3.1:85851806-85851825 | None:intergenic | 25.0% |
| !!! | GTTAGGGTTTTTTTTCATAT+AGG | - | chr3.1:85852057-85852076 | MS.gene75767:CDS | 25.0% |
| !!! | TATTATTTTGCAATACATGG+AGG | - | chr3.1:85851974-85851993 | MS.gene75767:CDS | 25.0% |
| !!! | TCAGCTTCTTTTTTATTGTT+AGG | + | chr3.1:85851807-85851826 | None:intergenic | 25.0% |
| !!! | TGTTAGTGGTTAATTTGTTA+GGG | - | chr3.1:85852084-85852103 | MS.gene75767:CDS | 25.0% |
| !!! | TTACTATAACATTTTGAAGG+TGG | - | chr3.1:85851707-85851726 | MS.gene75767:CDS | 25.0% |
| AAGATAACATTCCCAGATAA+AGG | - | chr3.1:85853152-85853171 | MS.gene75767:intron | 30.0% | |
| AGATAACATTCCCAGATAAA+GGG | - | chr3.1:85853153-85853172 | MS.gene75767:intron | 30.0% | |
| ATGAATTGTTCAAGAGAGAT+GGG | - | chr3.1:85853234-85853253 | MS.gene75767:intron | 30.0% | |
| CATGTCGTTAATAAACAAGA+GGG | + | chr3.1:85852147-85852166 | None:intergenic | 30.0% | |
| GATATCTTTGCAGAATTCTT+TGG | - | chr3.1:85852318-85852337 | MS.gene75767:intron | 30.0% | |
| GGTAGAAATTGGAATTGAAA+TGG | - | chr3.1:85852014-85852033 | MS.gene75767:CDS | 30.0% | |
| TCAAGAAAATGCAACACATT+AGG | + | chr3.1:85851941-85851960 | None:intergenic | 30.0% | |
| TCATAAACATTCCTTCTTTG+AGG | + | chr3.1:85852216-85852235 | None:intergenic | 30.0% | |
| TCATGTCGTTAATAAACAAG+AGG | + | chr3.1:85852148-85852167 | None:intergenic | 30.0% | |
| TGATTTGAGGATCATATTTG+AGG | - | chr3.1:85853439-85853458 | MS.gene75767:CDS | 30.0% | |
| TTTATGGGTCAATTGTTCTA+AGG | - | chr3.1:85853035-85853054 | MS.gene75767:intron | 30.0% | |
| ! | ATTAGTTGATTCCCTTTATC+TGG | + | chr3.1:85853167-85853186 | None:intergenic | 30.0% |
| ! | TTAGTTGATTCCCTTTATCT+GGG | + | chr3.1:85853166-85853185 | None:intergenic | 30.0% |
| !! | ATTAAGCATTGAAGTAAAGC+CGG | - | chr3.1:85853112-85853131 | MS.gene75767:intron | 30.0% |
| !! | TTTGTTAGGGTTATTTTGTG+TGG | - | chr3.1:85852097-85852116 | MS.gene75767:CDS | 30.0% |
| AAGATATCTTCTGCACTTCT+TGG | + | chr3.1:85852306-85852325 | None:intergenic | 35.0% | |
| ACGTTTCGTTTATCATCGTT+TGG | - | chr3.1:85852583-85852602 | MS.gene75767:intron | 35.0% | |
| AGGAATGTTTATGATCAGCT+TGG | - | chr3.1:85852222-85852241 | MS.gene75767:intron | 35.0% | |
| AGGTCTAGGTTAGAGATATA+AGG | - | chr3.1:85852949-85852968 | MS.gene75767:CDS | 35.0% | |
| ATATCACTAGCAGAAGCTAT+TGG | - | chr3.1:85853281-85853300 | MS.gene75767:intron | 35.0% | |
| ATCACAAATACAAGATCTGC+TGG | + | chr3.1:85853200-85853219 | None:intergenic | 35.0% | |
| CAAGGAAAATGAAGATCTCA+AGG | - | chr3.1:85852538-85852557 | MS.gene75767:intron | 35.0% | |
| CATGAATTGTTCAAGAGAGA+TGG | - | chr3.1:85853233-85853252 | MS.gene75767:intron | 35.0% | |
| CCAGATGATCCAAAATTCAA+GGG | + | chr3.1:85852351-85852370 | None:intergenic | 35.0% | |
| CTTCTTGGATAAAATCCACT+TGG | + | chr3.1:85852291-85852310 | None:intergenic | 35.0% | |
| GAAGGTGGATAAAAATGCTA+CGG | - | chr3.1:85851722-85851741 | MS.gene75767:CDS | 35.0% | |
| GACTAAATTGCCTTGTAGTT+TGG | - | chr3.1:85852494-85852513 | MS.gene75767:intron | 35.0% | |
| GAGAACAAGGGTTAAAAGAA+AGG | - | chr3.1:85852244-85852263 | MS.gene75767:intron | 35.0% | |
| TAAATTGCCTTGTAGTTTGG+AGG | - | chr3.1:85852497-85852516 | MS.gene75767:intron | 35.0% | |
| TATTGAGTGATCCTCAAAGA+AGG | - | chr3.1:85852202-85852221 | MS.gene75767:intron | 35.0% | |
| TATTGTTAGGGTTCTTGTCA+GGG | + | chr3.1:85851794-85851813 | None:intergenic | 35.0% | |
| TCCAGATGATCCAAAATTCA+AGG | + | chr3.1:85852352-85852371 | None:intergenic | 35.0% | |
| TCTCTCTTGAACAATTCATG+AGG | + | chr3.1:85853233-85853252 | None:intergenic | 35.0% | |
| TGAAGGAATGCCAATAACAA+AGG | - | chr3.1:85853400-85853419 | MS.gene75767:CDS | 35.0% | |
| TGATTATCCAAACAAGGTCT+AGG | - | chr3.1:85852935-85852954 | MS.gene75767:CDS | 35.0% | |
| TTATTGTTAGGGTTCTTGTC+AGG | + | chr3.1:85851795-85851814 | None:intergenic | 35.0% | |
| ! | ATGATGACGAAAATTGCAGA+AGG | - | chr3.1:85853069-85853088 | MS.gene75767:intron | 35.0% |
| ! | TGATGACGAAAATTGCAGAA+GGG | - | chr3.1:85853070-85853089 | MS.gene75767:intron | 35.0% |
| !! | AGTTGTATTCTGGTTCTACA+AGG | - | chr3.1:85852520-85852539 | MS.gene75767:intron | 35.0% |
| !! | GTTCTGGTGTCAATTTTGTT+GGG | + | chr3.1:85853472-85853491 | None:intergenic | 35.0% |
| !! | TGTTCTGGTGTCAATTTTGT+TGG | + | chr3.1:85853473-85853492 | None:intergenic | 35.0% |
| !! | TTAAGCATTGAAGTAAAGCC+GGG | - | chr3.1:85853113-85853132 | MS.gene75767:intron | 35.0% |
| !!! | GAGGGTTTAGTTTTATGTCA+TGG | - | chr3.1:85851993-85852012 | MS.gene75767:CDS | 35.0% |
| AAGAGATTTCCATCTGATGG+TGG | - | chr3.1:85852384-85852403 | MS.gene75767:intron | 40.0% | |
| ACCATCAGATGGAAATCTCT+TGG | + | chr3.1:85852385-85852404 | None:intergenic | 40.0% | |
| AGTTTGGAGGAGTTGTATTC+TGG | - | chr3.1:85852510-85852529 | MS.gene75767:intron | 40.0% | |
| ATACAAGATCTGCTGGAAGT+TGG | + | chr3.1:85853193-85853212 | None:intergenic | 40.0% | |
| ATGATCAGCTTGGAGAACAA+GGG | - | chr3.1:85852232-85852251 | MS.gene75767:intron | 40.0% | |
| ATGCCAATAACAAAGGAACC+CGG | - | chr3.1:85853407-85853426 | MS.gene75767:CDS | 40.0% | |
| CAAACGTAGTTTAAGTGTCC+CGG | - | chr3.1:85853334-85853353 | MS.gene75767:intron | 40.0% | |
| CAAGGCAATTTAGTCTCAAC+AGG | + | chr3.1:85852489-85852508 | None:intergenic | 40.0% | |
| CCTCAGAGATCTGTTTGAAA+CGG | + | chr3.1:85851833-85851852 | None:intergenic | 40.0% | |
| GAGCTTCTTGTTGCTAATGA+AGG | - | chr3.1:85853383-85853402 | MS.gene75767:CDS | 40.0% | |
| GTGAAAAACATTGTGAGTCC+TGG | - | chr3.1:85853356-85853375 | MS.gene75767:intron | 40.0% | |
| TACAACTCCTCCAAACTACA+AGG | + | chr3.1:85852507-85852526 | None:intergenic | 40.0% | |
| TATGATCAGCTTGGAGAACA+AGG | - | chr3.1:85852231-85852250 | MS.gene75767:intron | 40.0% | |
| TCCAAGAGATTTCCATCTGA+TGG | - | chr3.1:85852381-85852400 | MS.gene75767:intron | 40.0% | |
| TCTCTAACCTAGACCTTGTT+TGG | + | chr3.1:85852945-85852964 | None:intergenic | 40.0% | |
| TTTGTTCCTTTCTTCCATCC+CGG | + | chr3.1:85853134-85853153 | None:intergenic | 40.0% | |
| ! | AATTTTGGATCATCTGGACC+AGG | - | chr3.1:85852354-85852373 | MS.gene75767:intron | 40.0% |
| ! | ATTTTGGATCATCTGGACCA+GGG | - | chr3.1:85852355-85852374 | MS.gene75767:intron | 40.0% |
| ! | CCCTTGAATTTTGGATCATC+TGG | - | chr3.1:85852348-85852367 | MS.gene75767:intron | 40.0% |
| ! | CTCAGAGATCTGTTTGAAAC+GGG | + | chr3.1:85851832-85851851 | None:intergenic | 40.0% |
| ! | GACTCACAATGTTTTTCACC+GGG | + | chr3.1:85853355-85853374 | None:intergenic | 40.0% |
| ! | GGAAGTAGTCCCTTGAATTT+TGG | - | chr3.1:85852339-85852358 | MS.gene75767:intron | 40.0% |
| ! | GGACTCACAATGTTTTTCAC+CGG | + | chr3.1:85853356-85853375 | None:intergenic | 40.0% |
| AACAAAGGAACCCGGTCATA+GGG | - | chr3.1:85853415-85853434 | MS.gene75767:CDS | 45.0% | |
| AATTTAGTCTCAACAGGCGG+TGG | + | chr3.1:85852483-85852502 | None:intergenic | 45.0% | |
| CCGTTTCAAACAGATCTCTG+AGG | - | chr3.1:85851830-85851849 | MS.gene75767:CDS | 45.0% | |
| GAAGATCTCAAGGACAGTAG+TGG | - | chr3.1:85852548-85852567 | MS.gene75767:intron | 45.0% | |
| GATAAACGAAACGTACCCGT+AGG | + | chr3.1:85852577-85852596 | None:intergenic | 45.0% | |
| GCAACAAGAAGCTCATAACC+AGG | + | chr3.1:85853377-85853396 | None:intergenic | 45.0% | |
| GGCAATTTAGTCTCAACAGG+CGG | + | chr3.1:85852486-85852505 | None:intergenic | 45.0% | |
| TAACAAAGGAACCCGGTCAT+AGG | - | chr3.1:85853414-85853433 | MS.gene75767:CDS | 45.0% | |
| TCACTAGCAGAAGCTATTGG+TGG | - | chr3.1:85853284-85853303 | MS.gene75767:intron | 45.0% | |
| TTTAGTGCAGCACGTTGTTC+TGG | + | chr3.1:85853488-85853507 | None:intergenic | 45.0% | |
| ! | TGACCGGGTTCCTTTGTTAT+TGG | + | chr3.1:85853413-85853432 | None:intergenic | 45.0% |
| !! | ACAGATCTCTGAGGCTTATG+CGG | - | chr3.1:85851839-85851858 | MS.gene75767:CDS | 45.0% |
| !! | AGGACAGTAGTGGATTCCTA+CGG | - | chr3.1:85852558-85852577 | MS.gene75767:intron | 45.0% |
| ACAAAGGAACCCGGTCATAG+GGG | - | chr3.1:85853416-85853435 | MS.gene75767:CDS | 50.0% | |
| CATCGTTTGGATCCTCTGCA+AGG | - | chr3.1:85852596-85852615 | MS.gene75767:intron | 50.0% | |
| CCAGAAACTGAGTCACCAAG+TGG | - | chr3.1:85852273-85852292 | MS.gene75767:intron | 50.0% | |
| CCTCAAATCACCCCTATGAC+CGG | + | chr3.1:85853429-85853448 | None:intergenic | 50.0% | |
| CTCAAATCACCCCTATGACC+GGG | + | chr3.1:85853428-85853447 | None:intergenic | 50.0% | |
| GCATTGAAGTAAAGCCGGGA+TGG | - | chr3.1:85853117-85853136 | MS.gene75767:intron | 50.0% | |
| GCTGCACTAAAGCGAGCATT+GGG | - | chr3.1:85853497-85853516 | MS.gene75767:CDS | 50.0% | |
| GGATTGGGATCTCCACTGAA+TGG | + | chr3.1:85852639-85852658 | None:intergenic | 50.0% | |
| GTAAAGCCGGGATGGAAGAA+AGG | - | chr3.1:85853125-85853144 | MS.gene75767:intron | 50.0% | |
| TCAACAGGCGGTGGTTTCTT+TGG | + | chr3.1:85852474-85852493 | None:intergenic | 50.0% | |
| TGCTGCACTAAAGCGAGCAT+TGG | - | chr3.1:85853496-85853515 | MS.gene75767:CDS | 50.0% | |
| TTTCCTGCTCCACCATCAGA+TGG | + | chr3.1:85852396-85852415 | None:intergenic | 50.0% | |
| ! | CCACTTGGTGACTCAGTTTC+TGG | + | chr3.1:85852276-85852295 | None:intergenic | 50.0% |
| !! | GCAGGAAATGGTGGATTCAG+CGG | - | chr3.1:85852408-85852427 | MS.gene75767:intron | 50.0% |
| !! | GGACAGTAGTGGATTCCTAC+GGG | - | chr3.1:85852559-85852578 | MS.gene75767:intron | 50.0% |
| !! | GGTGACTCAGTTTCTGGTGA+TGG | + | chr3.1:85852270-85852289 | None:intergenic | 50.0% |
| !! | TCTGATGGTGGAGCAGGAAA+TGG | - | chr3.1:85852396-85852415 | MS.gene75767:intron | 50.0% |
| !! | TTTCCATCTGATGGTGGAGC+AGG | - | chr3.1:85852390-85852409 | MS.gene75767:intron | 50.0% |
| CCGGTCATAGGGGTGATTTG+AGG | - | chr3.1:85853426-85853445 | MS.gene75767:CDS | 55.0% | |
| GCAATGGTGCAGCCATTCAG+TGG | - | chr3.1:85852624-85852643 | MS.gene75767:intron | 55.0% | |
| GGAAATCTCTTGGACCTCCC+TGG | + | chr3.1:85852375-85852394 | None:intergenic | 55.0% | |
| TTGGATCATCTGGACCAGGG+AGG | - | chr3.1:85852358-85852377 | MS.gene75767:intron | 55.0% | |
| !! | GATGGTGGAGCAGGAAATGG+TGG | - | chr3.1:85852399-85852418 | MS.gene75767:intron | 55.0% |
| !! | GCACTAAAGCGAGCATTGGG+TGG | - | chr3.1:85853500-85853519 | MS.gene75767:CDS | 55.0% |
| CCATTGCAGCAGCCTTGCAG+AGG | + | chr3.1:85852611-85852630 | None:intergenic | 60.0% | |
| CCTCTGCAAGGCTGCTGCAA+TGG | - | chr3.1:85852608-85852627 | MS.gene75767:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 85851696 | 85853526 | 85851696 | ID=MS.gene75767 |
| chr3.1 | mRNA | 85851696 | 85853526 | 85851696 | ID=MS.gene75767.t1;Parent=MS.gene75767 |
| chr3.1 | exon | 85853362 | 85853526 | 85853362 | ID=MS.gene75767.t1.exon1;Parent=MS.gene75767.t1 |
| chr3.1 | CDS | 85853362 | 85853526 | 85853362 | ID=cds.MS.gene75767.t1;Parent=MS.gene75767.t1 |
| chr3.1 | exon | 85852642 | 85853021 | 85852642 | ID=MS.gene75767.t1.exon2;Parent=MS.gene75767.t1 |
| chr3.1 | CDS | 85852642 | 85853021 | 85852642 | ID=cds.MS.gene75767.t1;Parent=MS.gene75767.t1 |
| chr3.1 | exon | 85851696 | 85852134 | 85851696 | ID=MS.gene75767.t1.exon3;Parent=MS.gene75767.t1 |
| chr3.1 | CDS | 85851696 | 85852134 | 85851696 | ID=cds.MS.gene75767.t1;Parent=MS.gene75767.t1 |
| Gene Sequence |
| Protein sequence |
