Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01472.t1 | XP_003593642.1 | 94.5 | 347 | 12 | 2 | 1 | 347 | 1 | 340 | 2.70E-182 | 647.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01472.t1 | Q5R8J8 | 43.9 | 358 | 164 | 8 | 1 | 345 | 1 | 334 | 2.6e-69 | 263.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01472.t1 | A2Q505 | 94.5 | 347 | 12 | 2 | 1 | 347 | 1 | 340 | 1.9e-182 | 647.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene045555 | MS.gene01472 | PPI |
MS.gene01472 | MS.gene35396 | PPI |
MS.gene01472 | MS.gene002499 | PPI |
MS.gene01472 | MS.gene75767 | PPI |
MS.gene034468 | MS.gene01472 | PPI |
MS.gene50013 | MS.gene01472 | PPI |
MS.gene01472 | MS.gene047354 | PPI |
MS.gene01472 | MS.gene037465 | PPI |
MS.gene01472 | MS.gene066761 | PPI |
MS.gene66767 | MS.gene01472 | PPI |
MS.gene01472 | MS.gene43051 | PPI |
MS.gene01472 | MS.gene77100 | PPI |
MS.gene01472 | MS.gene014782 | PPI |
MS.gene01038 | MS.gene01472 | PPI |
MS.gene01472 | MS.gene50004 | PPI |
MS.gene01472 | MS.gene031675 | PPI |
MS.gene01472 | MS.gene007227 | PPI |
MS.gene01472 | MS.gene84339 | PPI |
MS.gene006630 | MS.gene01472 | PPI |
MS.gene01472 | MS.gene072961 | PPI |
MS.gene01472 | MS.gene050322 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01472.t1 | MTR_2g014470 | 97.118 | 347 | 3 | 2 | 1 | 347 | 1 | 340 | 0.0 | 681 |
MS.gene01472.t1 | MTR_4g078850 | 78.510 | 349 | 67 | 4 | 1 | 346 | 1 | 344 | 0.0 | 536 |
MS.gene01472.t1 | MTR_4g015840 | 69.452 | 347 | 97 | 4 | 1 | 346 | 1 | 339 | 1.42e-167 | 471 |
MS.gene01472.t1 | MTR_2g090705 | 69.429 | 350 | 88 | 3 | 1 | 346 | 1 | 335 | 7.81e-163 | 458 |
MS.gene01472.t1 | MTR_2g014480 | 68.605 | 344 | 92 | 6 | 1 | 336 | 1 | 336 | 3.24e-152 | 431 |
MS.gene01472.t1 | MTR_3g108020 | 55.652 | 345 | 133 | 4 | 1 | 345 | 1 | 325 | 1.41e-127 | 369 |
MS.gene01472.t1 | MTR_4g015840 | 68.924 | 251 | 72 | 3 | 97 | 346 | 17 | 262 | 5.74e-114 | 332 |
MS.gene01472.t1 | MTR_3g437360 | 38.872 | 337 | 196 | 7 | 2 | 329 | 3 | 338 | 5.37e-68 | 217 |
MS.gene01472.t1 | MTR_5g037880 | 54.237 | 177 | 81 | 0 | 169 | 345 | 98 | 274 | 2.56e-66 | 211 |
MS.gene01472.t1 | MTR_5g037880 | 60.000 | 75 | 23 | 1 | 4 | 71 | 5 | 79 | 7.47e-21 | 91.3 |
MS.gene01472.t1 | MTR_3g437840 | 51.553 | 161 | 78 | 0 | 186 | 346 | 2 | 162 | 5.67e-54 | 175 |
MS.gene01472.t1 | MTR_7g109340 | 32.464 | 345 | 201 | 6 | 5 | 345 | 27 | 343 | 2.82e-50 | 171 |
MS.gene01472.t1 | MTR_2g006890 | 45.000 | 180 | 98 | 1 | 167 | 345 | 196 | 375 | 3.56e-44 | 156 |
MS.gene01472.t1 | MTR_8g006430 | 33.333 | 387 | 173 | 12 | 5 | 345 | 15 | 362 | 4.82e-44 | 157 |
MS.gene01472.t1 | MTR_3g088140 | 44.000 | 175 | 97 | 1 | 165 | 338 | 172 | 346 | 7.47e-44 | 154 |
MS.gene01472.t1 | MTR_3g437850 | 35.610 | 205 | 89 | 5 | 3 | 202 | 1 | 167 | 4.84e-32 | 118 |
MS.gene01472.t1 | MTR_3g087030 | 28.065 | 367 | 215 | 11 | 4 | 344 | 82 | 425 | 5.21e-32 | 124 |
MS.gene01472.t1 | MTR_2g087660 | 33.511 | 188 | 117 | 4 | 161 | 345 | 176 | 358 | 3.15e-25 | 105 |
MS.gene01472.t1 | MTR_2g087660 | 60.563 | 71 | 23 | 2 | 5 | 75 | 14 | 79 | 5.14e-12 | 67.0 |
MS.gene01472.t1 | MTR_4g050420 | 32.979 | 188 | 118 | 4 | 161 | 345 | 174 | 356 | 1.02e-24 | 104 |
MS.gene01472.t1 | MTR_4g050420 | 59.155 | 71 | 24 | 2 | 5 | 75 | 14 | 79 | 3.84e-11 | 64.3 |
MS.gene01472.t1 | MTR_5g065160 | 27.397 | 365 | 204 | 12 | 4 | 338 | 83 | 416 | 3.87e-23 | 100 |
MS.gene01472.t1 | MTR_5g065160 | 27.123 | 365 | 205 | 12 | 4 | 338 | 76 | 409 | 4.76e-23 | 100 |
MS.gene01472.t1 | MTR_5g065160 | 27.397 | 365 | 204 | 12 | 4 | 338 | 82 | 415 | 4.84e-23 | 99.8 |
MS.gene01472.t1 | MTR_5g065160 | 27.123 | 365 | 205 | 12 | 4 | 338 | 83 | 416 | 6.62e-23 | 99.8 |
MS.gene01472.t1 | MTR_2g104030 | 44.697 | 132 | 51 | 4 | 4 | 135 | 70 | 179 | 2.34e-21 | 95.1 |
MS.gene01472.t1 | MTR_7g101070 | 60.000 | 65 | 26 | 0 | 4 | 68 | 358 | 422 | 4.95e-20 | 91.3 |
MS.gene01472.t1 | MTR_7g112360 | 46.970 | 66 | 32 | 1 | 5 | 67 | 17 | 82 | 4.55e-16 | 75.1 |
MS.gene01472.t1 | MTR_7g069480 | 51.429 | 70 | 32 | 1 | 3 | 72 | 26 | 93 | 7.49e-16 | 79.0 |
MS.gene01472.t1 | MTR_7g112360 | 46.970 | 66 | 32 | 1 | 5 | 67 | 17 | 82 | 7.57e-16 | 73.2 |
MS.gene01472.t1 | MTR_5g012530 | 48.649 | 74 | 36 | 1 | 4 | 75 | 12 | 85 | 9.79e-16 | 78.6 |
MS.gene01472.t1 | MTR_3g027580 | 52.113 | 71 | 33 | 1 | 4 | 74 | 89 | 158 | 2.57e-15 | 77.0 |
MS.gene01472.t1 | MTR_2g087660 | 32.836 | 134 | 84 | 3 | 161 | 293 | 176 | 304 | 2.88e-15 | 75.9 |
MS.gene01472.t1 | MTR_2g087660 | 60.563 | 71 | 23 | 2 | 5 | 75 | 14 | 79 | 2.88e-12 | 67.0 |
MS.gene01472.t1 | MTR_6g471050 | 25.000 | 352 | 204 | 16 | 30 | 346 | 7 | 333 | 4.69e-15 | 76.3 |
MS.gene01472.t1 | MTR_6g027110 | 44.000 | 75 | 38 | 1 | 3 | 73 | 1 | 75 | 5.87e-15 | 71.6 |
MS.gene01472.t1 | MTR_5g065860 | 50.000 | 64 | 31 | 1 | 4 | 67 | 48 | 110 | 6.72e-15 | 71.6 |
MS.gene01472.t1 | MTR_1g110310 | 49.296 | 71 | 35 | 1 | 4 | 74 | 16 | 85 | 1.56e-14 | 74.7 |
MS.gene01472.t1 | MTR_6g027030 | 45.333 | 75 | 37 | 1 | 3 | 73 | 1 | 75 | 1.81e-14 | 72.0 |
MS.gene01472.t1 | MTR_8g022310 | 44.928 | 69 | 33 | 1 | 4 | 67 | 10 | 78 | 3.21e-14 | 71.2 |
MS.gene01472.t1 | MTR_8g022310 | 44.928 | 69 | 33 | 1 | 4 | 67 | 10 | 78 | 4.99e-14 | 70.5 |
MS.gene01472.t1 | MTR_4g085070 | 50.000 | 60 | 27 | 1 | 11 | 67 | 19 | 78 | 5.09e-14 | 69.3 |
MS.gene01472.t1 | MTR_8g022310 | 43.478 | 69 | 34 | 1 | 4 | 67 | 10 | 78 | 5.33e-14 | 70.5 |
MS.gene01472.t1 | MTR_8g022310 | 43.478 | 69 | 34 | 1 | 4 | 67 | 10 | 78 | 7.09e-14 | 70.9 |
MS.gene01472.t1 | MTR_5g035770 | 47.945 | 73 | 37 | 1 | 4 | 76 | 25 | 96 | 1.71e-13 | 71.2 |
MS.gene01472.t1 | MTR_6g026940 | 44.928 | 69 | 34 | 1 | 3 | 67 | 1 | 69 | 2.10e-13 | 68.2 |
MS.gene01472.t1 | MTR_1g052110 | 47.692 | 65 | 33 | 1 | 6 | 70 | 40 | 103 | 2.82e-13 | 69.7 |
MS.gene01472.t1 | MTR_4g023470 | 39.167 | 120 | 59 | 4 | 5 | 123 | 87 | 193 | 5.75e-13 | 70.1 |
MS.gene01472.t1 | MTR_2g436560 | 38.710 | 124 | 64 | 5 | 4 | 123 | 104 | 219 | 1.32e-12 | 68.6 |
MS.gene01472.t1 | MTR_7g092380 | 42.105 | 76 | 40 | 2 | 6 | 78 | 24 | 98 | 4.23e-12 | 66.2 |
MS.gene01472.t1 | MTR_1g029460 | 41.667 | 72 | 41 | 1 | 3 | 74 | 5 | 75 | 4.86e-12 | 67.0 |
MS.gene01472.t1 | MTR_5g004570 | 45.070 | 71 | 38 | 1 | 4 | 74 | 6 | 75 | 1.59e-11 | 63.9 |
MS.gene01472.t1 | MTR_1g087580 | 34.646 | 127 | 76 | 3 | 224 | 345 | 59 | 183 | 7.43e-11 | 61.2 |
MS.gene01472.t1 | MTR_4g094275 | 41.558 | 77 | 40 | 3 | 2 | 75 | 49 | 123 | 8.80e-11 | 60.8 |
MS.gene01472.t1 | MTR_4g109510 | 44.118 | 68 | 35 | 1 | 5 | 69 | 9 | 76 | 9.11e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01472.t1 | AT2G20560 | 74.000 | 350 | 72 | 4 | 1 | 345 | 1 | 336 | 0.0 | 516 |
MS.gene01472.t1 | AT4G28480 | 69.101 | 356 | 90 | 3 | 1 | 345 | 1 | 347 | 1.29e-170 | 478 |
MS.gene01472.t1 | AT3G08910 | 66.185 | 346 | 92 | 6 | 1 | 346 | 1 | 321 | 4.03e-160 | 451 |
MS.gene01472.t1 | AT5G01390 | 63.143 | 350 | 111 | 4 | 1 | 347 | 1 | 335 | 2.51e-155 | 439 |
MS.gene01472.t1 | AT4G28480 | 60.870 | 345 | 79 | 3 | 1 | 345 | 1 | 289 | 1.99e-141 | 402 |
MS.gene01472.t1 | AT5G25530 | 58.757 | 354 | 122 | 7 | 1 | 346 | 1 | 338 | 1.01e-138 | 397 |
MS.gene01472.t1 | AT5G25530 | 57.459 | 362 | 122 | 8 | 1 | 346 | 1 | 346 | 7.60e-136 | 390 |
MS.gene01472.t1 | AT1G10350 | 56.196 | 347 | 149 | 3 | 1 | 345 | 1 | 346 | 6.09e-129 | 373 |
MS.gene01472.t1 | AT3G47940 | 53.740 | 361 | 136 | 4 | 1 | 345 | 1 | 346 | 1.98e-127 | 369 |
MS.gene01472.t1 | AT1G59725 | 54.598 | 348 | 135 | 3 | 1 | 345 | 1 | 328 | 9.11e-126 | 364 |
MS.gene01472.t1 | AT2G20550 | 55.326 | 291 | 72 | 4 | 103 | 345 | 3 | 283 | 8.91e-99 | 294 |
MS.gene01472.t1 | AT2G20550 | 55.326 | 291 | 72 | 4 | 103 | 345 | 3 | 283 | 8.91e-99 | 294 |
MS.gene01472.t1 | AT5G01390 | 45.533 | 347 | 119 | 7 | 1 | 347 | 1 | 277 | 2.12e-89 | 270 |
MS.gene01472.t1 | AT5G01390 | 55.238 | 210 | 76 | 4 | 1 | 207 | 1 | 195 | 1.25e-68 | 215 |
MS.gene01472.t1 | AT5G01390 | 61.029 | 136 | 48 | 2 | 1 | 135 | 1 | 132 | 2.65e-49 | 166 |
MS.gene01472.t1 | AT5G01390 | 55.634 | 142 | 24 | 1 | 206 | 347 | 136 | 238 | 8.66e-44 | 151 |
MS.gene01472.t1 | AT1G44160 | 47.753 | 178 | 93 | 0 | 168 | 345 | 176 | 353 | 5.69e-47 | 163 |
MS.gene01472.t1 | AT3G62600 | 32.378 | 349 | 206 | 7 | 2 | 346 | 24 | 346 | 3.70e-45 | 158 |
MS.gene01472.t1 | AT1G11040 | 43.353 | 173 | 98 | 0 | 166 | 338 | 253 | 425 | 1.13e-42 | 153 |
MS.gene01472.t1 | AT3G44110 | 33.702 | 362 | 201 | 11 | 5 | 345 | 15 | 358 | 2.10e-39 | 144 |
MS.gene01472.t1 | AT5G22060 | 33.149 | 362 | 204 | 10 | 5 | 345 | 15 | 359 | 2.22e-37 | 139 |
MS.gene01472.t1 | AT3G44110 | 33.735 | 332 | 181 | 11 | 5 | 315 | 15 | 328 | 7.74e-33 | 125 |
MS.gene01472.t1 | AT1G80030 | 28.647 | 377 | 209 | 13 | 4 | 344 | 75 | 427 | 3.76e-29 | 117 |
MS.gene01472.t1 | AT1G80030 | 28.647 | 377 | 209 | 13 | 4 | 344 | 75 | 427 | 5.14e-29 | 117 |
MS.gene01472.t1 | AT1G80030 | 28.647 | 377 | 209 | 13 | 4 | 344 | 75 | 427 | 5.14e-29 | 117 |
MS.gene01472.t1 | AT1G80030 | 28.647 | 377 | 209 | 13 | 4 | 344 | 75 | 427 | 5.14e-29 | 117 |
MS.gene01472.t1 | AT2G22360 | 65.333 | 75 | 20 | 2 | 4 | 76 | 86 | 156 | 6.98e-22 | 96.3 |
MS.gene01472.t1 | AT2G22360 | 30.147 | 136 | 91 | 3 | 211 | 344 | 295 | 428 | 5.94e-12 | 67.0 |
MS.gene01472.t1 | AT3G17830 | 53.261 | 92 | 37 | 2 | 2 | 91 | 61 | 148 | 5.86e-21 | 94.4 |
MS.gene01472.t1 | AT4G39960 | 58.904 | 73 | 28 | 1 | 4 | 76 | 85 | 155 | 2.44e-20 | 92.0 |
MS.gene01472.t1 | AT4G39960 | 30.147 | 136 | 91 | 3 | 211 | 344 | 301 | 434 | 1.69e-12 | 68.6 |
MS.gene01472.t1 | AT4G39960 | 58.904 | 73 | 28 | 1 | 4 | 76 | 85 | 155 | 2.44e-20 | 92.0 |
MS.gene01472.t1 | AT4G39960 | 30.147 | 136 | 91 | 3 | 211 | 344 | 301 | 434 | 1.69e-12 | 68.6 |
MS.gene01472.t1 | AT5G48030 | 46.903 | 113 | 50 | 3 | 4 | 116 | 94 | 196 | 8.30e-18 | 84.7 |
MS.gene01472.t1 | AT5G16650 | 59.375 | 64 | 25 | 1 | 4 | 67 | 11 | 73 | 6.60e-17 | 77.8 |
MS.gene01472.t1 | AT5G03160 | 53.846 | 65 | 30 | 0 | 4 | 68 | 370 | 434 | 6.92e-17 | 82.0 |
MS.gene01472.t1 | AT5G16650 | 59.375 | 64 | 25 | 1 | 4 | 67 | 11 | 73 | 8.45e-17 | 76.3 |
MS.gene01472.t1 | AT1G59980 | 47.826 | 69 | 35 | 1 | 6 | 74 | 25 | 92 | 1.53e-15 | 77.4 |
MS.gene01472.t1 | AT2G41000 | 47.826 | 69 | 32 | 1 | 3 | 67 | 2 | 70 | 1.64e-15 | 75.1 |
MS.gene01472.t1 | AT1G68370 | 52.113 | 71 | 33 | 1 | 4 | 74 | 17 | 86 | 2.26e-15 | 77.0 |
MS.gene01472.t1 | AT1G56300 | 48.485 | 66 | 31 | 1 | 5 | 67 | 14 | 79 | 2.41e-15 | 73.2 |
MS.gene01472.t1 | AT1G56300 | 48.485 | 66 | 31 | 1 | 5 | 67 | 14 | 79 | 2.58e-15 | 72.0 |
MS.gene01472.t1 | AT1G59980 | 47.826 | 69 | 35 | 1 | 6 | 74 | 25 | 92 | 4.08e-15 | 76.3 |
MS.gene01472.t1 | AT2G41000 | 47.826 | 69 | 32 | 1 | 3 | 67 | 2 | 70 | 5.50e-15 | 72.8 |
MS.gene01472.t1 | AT3G08970 | 51.316 | 76 | 33 | 2 | 2 | 77 | 25 | 96 | 2.06e-14 | 74.7 |
MS.gene01472.t1 | AT3G08970 | 51.316 | 76 | 33 | 2 | 2 | 77 | 25 | 96 | 2.06e-14 | 74.7 |
MS.gene01472.t1 | AT2G35720 | 47.945 | 73 | 36 | 1 | 4 | 74 | 15 | 87 | 3.22e-14 | 73.9 |
MS.gene01472.t1 | AT2G21510 | 50.000 | 72 | 35 | 1 | 4 | 75 | 6 | 76 | 1.68e-13 | 71.2 |
MS.gene01472.t1 | AT2G21510 | 50.000 | 72 | 35 | 1 | 4 | 75 | 6 | 76 | 1.68e-13 | 71.2 |
MS.gene01472.t1 | AT2G21510 | 50.000 | 72 | 35 | 1 | 4 | 75 | 6 | 76 | 1.74e-13 | 71.2 |
MS.gene01472.t1 | AT2G21510 | 50.000 | 72 | 35 | 1 | 4 | 75 | 6 | 76 | 1.74e-13 | 71.2 |
MS.gene01472.t1 | AT2G21510 | 50.000 | 72 | 35 | 1 | 4 | 75 | 6 | 76 | 2.30e-13 | 70.5 |
MS.gene01472.t1 | AT2G33735 | 43.077 | 65 | 36 | 1 | 4 | 68 | 22 | 85 | 1.05e-12 | 64.7 |
MS.gene01472.t1 | AT2G33735 | 43.077 | 65 | 36 | 1 | 4 | 68 | 22 | 85 | 1.05e-12 | 64.7 |
MS.gene01472.t1 | AT1G71000 | 45.455 | 66 | 33 | 1 | 5 | 67 | 9 | 74 | 1.66e-12 | 65.5 |
MS.gene01472.t1 | AT1G24120 | 44.595 | 74 | 40 | 1 | 4 | 77 | 20 | 92 | 1.74e-12 | 68.6 |
MS.gene01472.t1 | AT5G06910 | 46.154 | 65 | 34 | 1 | 6 | 70 | 31 | 94 | 2.00e-12 | 67.4 |
MS.gene01472.t1 | AT1G71000 | 45.455 | 66 | 33 | 1 | 5 | 67 | 9 | 74 | 3.66e-12 | 64.3 |
MS.gene01472.t1 | AT5G05750 | 36.283 | 113 | 61 | 3 | 4 | 116 | 114 | 215 | 5.37e-12 | 66.2 |
MS.gene01472.t1 | AT4G39150 | 47.222 | 72 | 37 | 1 | 4 | 75 | 6 | 76 | 5.62e-12 | 66.6 |
MS.gene01472.t1 | AT4G39150 | 47.222 | 72 | 37 | 1 | 4 | 75 | 6 | 76 | 5.62e-12 | 66.6 |
MS.gene01472.t1 | AT4G39150 | 47.222 | 72 | 37 | 1 | 4 | 75 | 6 | 76 | 5.62e-12 | 66.6 |
MS.gene01472.t1 | AT3G14200 | 45.312 | 64 | 33 | 1 | 6 | 67 | 14 | 77 | 7.05e-12 | 64.7 |
MS.gene01472.t1 | AT3G13310 | 46.774 | 62 | 29 | 1 | 6 | 67 | 66 | 123 | 2.21e-11 | 62.0 |
MS.gene01472.t1 | AT1G21080 | 43.038 | 79 | 44 | 1 | 3 | 81 | 5 | 82 | 2.52e-11 | 64.7 |
MS.gene01472.t1 | AT1G21080 | 43.038 | 79 | 44 | 1 | 3 | 81 | 5 | 82 | 2.61e-11 | 64.7 |
MS.gene01472.t1 | AT4G13830 | 38.806 | 67 | 40 | 1 | 3 | 68 | 65 | 131 | 2.84e-11 | 61.6 |
MS.gene01472.t1 | AT5G49060 | 46.269 | 67 | 34 | 1 | 4 | 70 | 99 | 163 | 3.24e-11 | 64.3 |
MS.gene01472.t1 | AT5G49060 | 46.269 | 67 | 34 | 1 | 4 | 70 | 99 | 163 | 3.24e-11 | 64.3 |
MS.gene01472.t1 | AT4G13830 | 38.806 | 67 | 40 | 1 | 3 | 68 | 65 | 131 | 3.77e-11 | 62.0 |
MS.gene01472.t1 | AT1G72416 | 34.831 | 89 | 49 | 2 | 4 | 90 | 5 | 86 | 4.38e-11 | 62.0 |
MS.gene01472.t1 | AT1G72416 | 34.444 | 90 | 50 | 2 | 4 | 91 | 5 | 87 | 6.57e-11 | 61.2 |
MS.gene01472.t1 | AT3G12170 | 43.077 | 65 | 36 | 1 | 6 | 70 | 13 | 76 | 6.77e-11 | 62.4 |
MS.gene01472.t1 | AT1G72416 | 34.444 | 90 | 50 | 2 | 4 | 91 | 5 | 87 | 7.47e-11 | 61.2 |
MS.gene01472.t1 | AT1G72416 | 34.444 | 90 | 50 | 2 | 4 | 91 | 5 | 87 | 8.12e-11 | 60.8 |
MS.gene01472.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 9.58e-11 | 63.2 |
MS.gene01472.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 9.58e-11 | 63.2 |
MS.gene01472.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 9.58e-11 | 63.2 |
MS.gene01472.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 9.58e-11 | 63.2 |
MS.gene01472.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 9.58e-11 | 63.2 |
MS.gene01472.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 9.58e-11 | 63.2 |
MS.gene01472.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 9.58e-11 | 63.2 |
MS.gene01472.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 9.58e-11 | 63.2 |
MS.gene01472.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 9.58e-11 | 63.2 |
Find 91 sgRNAs with CRISPR-Local
Find 155 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCCTTCTTTGAAGGATCTTT+TGG | 0.174093 | 2.2:+68417568 | None:intergenic |
TTCAGATATCTCTTTGAATT+TGG | 0.183628 | 2.2:+68419306 | None:intergenic |
AAGATATCGTTTGCGTTTCT+TGG | 0.221316 | 2.2:+68419035 | None:intergenic |
TTGACTTCTGAGCAGAAAAT+TGG | 0.241130 | 2.2:-68417505 | MS.gene01472:CDS |
TTATTTGAGGGATTCTTATC+AGG | 0.267987 | 2.2:+68419343 | None:intergenic |
GGATGAATAACATTGTTTAT+AGG | 0.269485 | 2.2:+68417631 | None:intergenic |
GGTTGCTCATTTCCTTTCTC+AGG | 0.283976 | 2.2:+68417820 | None:intergenic |
TATGGAGAAGAAGGGCTTAA+AGG | 0.285303 | 2.2:-68419140 | MS.gene01472:CDS |
AGTCAAACCAGGGTGGAAAA+AGG | 0.301287 | 2.2:-68417860 | MS.gene01472:CDS |
TCGGGTATTCAAGCCCGTTT+GGG | 0.303828 | 2.2:-68419001 | MS.gene01472:CDS |
TCACTTGCAGAAGCTTTAAC+AGG | 0.318196 | 2.2:-68417700 | MS.gene01472:CDS |
TTCGGGTATTCAAGCCCGTT+TGG | 0.333587 | 2.2:-68419002 | MS.gene01472:CDS |
AGTCTTGAGGAGCTCTATAA+AGG | 0.348476 | 2.2:-68418810 | MS.gene01472:CDS |
AAAGCAATTTATGATCAATA+TGG | 0.348727 | 2.2:-68419158 | MS.gene01472:CDS |
CTTATCAGGGTGCCACTTCA+TGG | 0.353470 | 2.2:+68419357 | None:intergenic |
CTTCAAAGAAGGGTAATCTT+AGG | 0.357619 | 2.2:-68417558 | MS.gene01472:CDS |
TACAAGAGATGGCAATGATT+TGG | 0.359667 | 2.2:-68417740 | MS.gene01472:CDS |
CTAAGATTACCCTTCTTTGA+AGG | 0.367122 | 2.2:+68417559 | None:intergenic |
AGATCTGCTGGTATCACATT+TGG | 0.371997 | 2.2:+68417799 | None:intergenic |
AGATCCTTTGGTGGAATGTT+TGG | 0.375285 | 2.2:-68418930 | MS.gene01472:CDS |
CTCAGCGTCTTTCTTATTTG+AGG | 0.384413 | 2.2:+68419330 | None:intergenic |
GGAATAGGCATACCTTCCTT+TGG | 0.388950 | 2.2:+68417589 | None:intergenic |
CCACCACCTCAAGATGCTTC+TGG | 0.389485 | 2.2:-68419110 | MS.gene01472:CDS |
GAGATGGACCAACGACGTTT+AGG | 0.392296 | 2.2:-68419064 | MS.gene01472:CDS |
ATGGAGAAGAAGGGCTTAAA+GGG | 0.402600 | 2.2:-68419139 | MS.gene01472:CDS |
AGAGGTGGAGCCAGATCCTT+TGG | 0.409550 | 2.2:-68418942 | MS.gene01472:CDS |
CACCTCAAGATGCTTCTGGC+GGG | 0.421807 | 2.2:-68419106 | MS.gene01472:CDS |
GGAATAACCTCTTCATAGCT+TGG | 0.426392 | 2.2:+68417610 | None:intergenic |
AATTGGAATCAAGAAACTTC+TGG | 0.433972 | 2.2:-68417488 | MS.gene01472:CDS |
AAACCGTAATGTTACCTCAT+AGG | 0.442940 | 2.2:+68419282 | None:intergenic |
TATGATCAATATGGAGAAGA+AGG | 0.445033 | 2.2:-68419149 | MS.gene01472:CDS |
GTCTCACAACACTGGATGGC+AGG | 0.445115 | 2.2:-68417666 | MS.gene01472:CDS |
TCAGCGTCTTTCTTATTTGA+GGG | 0.447077 | 2.2:+68419331 | None:intergenic |
TCATAAATTGCTTTCTTCTG+TGG | 0.457705 | 2.2:+68419167 | None:intergenic |
GTCTTGAGGAGCTCTATAAA+GGG | 0.464624 | 2.2:-68418809 | MS.gene01472:CDS |
TCCAAAAGATCCTTCAAAGA+AGG | 0.470055 | 2.2:-68417569 | MS.gene01472:CDS |
TGCTCAGAAGTCAACCTAGC+TGG | 0.472997 | 2.2:+68417514 | None:intergenic |
GTTGCTCATTTCCTTTCTCA+GGG | 0.474664 | 2.2:+68417821 | None:intergenic |
TATTTGAGGGATTCTTATCA+GGG | 0.478544 | 2.2:+68419344 | None:intergenic |
TCCTTTGGTGGAATGTTTGG+TGG | 0.483436 | 2.2:-68418927 | MS.gene01472:CDS |
ATAACAAATATAAGATCTGC+TGG | 0.490598 | 2.2:+68417787 | None:intergenic |
AAACATTCCACCAAAGGATC+TGG | 0.493654 | 2.2:+68418932 | None:intergenic |
AAAATCACATTCCCTGAGAA+AGG | 0.497224 | 2.2:-68417832 | MS.gene01472:CDS |
ATTGTTAAGATTTCCTCCAC+TGG | 0.504925 | 2.2:+68417886 | None:intergenic |
GCTGGTGGGAATGGAATGAG+AGG | 0.505271 | 2.2:-68418960 | MS.gene01472:CDS |
TCAATATCAAGTTTCCAGCT+AGG | 0.511373 | 2.2:-68417528 | MS.gene01472:CDS |
CCAGAAGCATCTTGAGGTGG+TGG | 0.511552 | 2.2:+68419110 | None:intergenic |
TTTCTTCAACTCTTCTTCTG+TGG | 0.512491 | 2.2:+68419396 | None:intergenic |
ACATTCTTCCAAAGTGGAGA+TGG | 0.515684 | 2.2:-68419080 | MS.gene01472:CDS |
CCAAAAGATCCTTCAAAGAA+GGG | 0.516873 | 2.2:-68417568 | MS.gene01472:CDS |
TTACTTCATTTGATGAAGCT+AGG | 0.518857 | 2.2:-68418890 | MS.gene01472:CDS |
AGAGATATCTGAAGCCTATG+AGG | 0.524531 | 2.2:-68419296 | MS.gene01472:intron |
CGAGGACCTTGCTGACGCAT+AGG | 0.535830 | 2.2:+68418867 | None:intergenic |
TCGTTGGTCCATCTCCACTT+TGG | 0.541943 | 2.2:+68419072 | None:intergenic |
CATGGTGTATTTACAAGAGA+TGG | 0.542850 | 2.2:-68417751 | MS.gene01472:CDS |
CCACCTCAAGATGCTTCTGG+CGG | 0.544744 | 2.2:-68419107 | MS.gene01472:CDS |
ATCGAAAACTTGCCATGAAG+TGG | 0.546006 | 2.2:-68419369 | MS.gene01472:CDS |
TAGATTGCCTTGTAGTCTTG+AGG | 0.546637 | 2.2:-68418823 | MS.gene01472:CDS |
TACTGTTCGTCTCACAACAC+TGG | 0.556149 | 2.2:-68417674 | MS.gene01472:CDS |
TAGAGCTCCTCAAGACTACA+AGG | 0.560767 | 2.2:+68418816 | None:intergenic |
TCAATAGCAGCTGCCTTGCG+AGG | 0.571839 | 2.2:+68418849 | None:intergenic |
TTAACAATTGAAGTCAAACC+AGG | 0.573245 | 2.2:-68417871 | MS.gene01472:CDS |
AGGGAAATTGCTGATGCAAG+TGG | 0.584073 | 2.2:-68418762 | MS.gene01472:CDS |
ATGATCAATATGGAGAAGAA+GGG | 0.585118 | 2.2:-68419148 | MS.gene01472:CDS |
TATTCATCCAAGCTATGAAG+AGG | 0.585414 | 2.2:-68417617 | MS.gene01472:CDS |
CGGGTATTCAAGCCCGTTTG+GGG | 0.586346 | 2.2:-68419000 | MS.gene01472:CDS |
ACCTCAAGATGCTTCTGGCG+GGG | 0.588669 | 2.2:-68419105 | MS.gene01472:CDS |
GGGAAATTGCTGATGCAAGT+GGG | 0.597387 | 2.2:-68418761 | MS.gene01472:intron |
CACTTGCAGAAGCTTTAACA+GGG | 0.610166 | 2.2:-68417699 | MS.gene01472:CDS |
GGTGGAGCCAGATCCTTTGG+TGG | 0.611596 | 2.2:-68418939 | MS.gene01472:CDS |
GGATTGAACCTAAACGTCGT+TGG | 0.612417 | 2.2:+68419056 | None:intergenic |
AGAAACTTCTGGCACCGTAG+TGG | 0.613726 | 2.2:-68417477 | None:intergenic |
CTATGAAGAGGTTATTCCAA+AGG | 0.619874 | 2.2:-68417605 | MS.gene01472:CDS |
GGTGGGAATGGAATGAGAGG+TGG | 0.620935 | 2.2:-68418957 | MS.gene01472:CDS |
GCTAGGCCTATGCGTCAGCA+AGG | 0.621159 | 2.2:-68418873 | MS.gene01472:CDS |
ACCACCAAACATTCCACCAA+AGG | 0.627179 | 2.2:+68418926 | None:intergenic |
TCTCACAACACTGGATGGCA+GGG | 0.628562 | 2.2:-68417665 | MS.gene01472:CDS |
GAAGAGGTTATTCCAAAGGA+AGG | 0.631458 | 2.2:-68417601 | MS.gene01472:CDS |
GTTCGTCTCACAACACTGGA+TGG | 0.631979 | 2.2:-68417670 | MS.gene01472:CDS |
CCGCCAGAAGCATCTTGAGG+TGG | 0.632302 | 2.2:+68419107 | None:intergenic |
CAGGAAAACTATGCCAGTGG+AGG | 0.633181 | 2.2:-68417899 | MS.gene01472:CDS |
TTGCAGGAAAACTATGCCAG+TGG | 0.635655 | 2.2:-68417902 | MS.gene01472:intron |
GCCCCGCCAGAAGCATCTTG+AGG | 0.639522 | 2.2:+68419104 | None:intergenic |
GCGTCAGCAAGGTCCTCGCA+AGG | 0.646053 | 2.2:-68418862 | MS.gene01472:CDS |
GGGTATTCAAGCCCGTTTGG+GGG | 0.650237 | 2.2:-68418999 | MS.gene01472:CDS |
GGGGCTACATTCTTCCAAAG+TGG | 0.666162 | 2.2:-68419086 | MS.gene01472:CDS |
CTCAAATAAGAAAGACGCTG+AGG | 0.667226 | 2.2:-68419329 | MS.gene01472:CDS |
TCTCTTGTAAATACACCATG+TGG | 0.682973 | 2.2:+68417754 | None:intergenic |
TAACAATTGAAGTCAAACCA+GGG | 0.689215 | 2.2:-68417870 | MS.gene01472:CDS |
CAATTGAAGTCAAACCAGGG+TGG | 0.720314 | 2.2:-68417867 | MS.gene01472:CDS |
GTTATTGATGAGAAACCACA+TGG | 0.724666 | 2.2:-68417769 | MS.gene01472:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TCTAAATTATTTTAAAAAAC+AGG | + | chr2.2:68418394-68418413 | None:intergenic | 10.0% |
!! | TAGAAATTCTGAATATTAAT+TGG | - | chr2.2:68417698-68417717 | MS.gene01472:CDS | 15.0% |
!! | AAAGCAATTTATGATCAATA+TGG | - | chr2.2:68417761-68417780 | MS.gene01472:CDS | 20.0% |
!! | TAAAACAATGATATGAAACA+CGG | + | chr2.2:68418750-68418769 | None:intergenic | 20.0% |
!!! | TTCTGAATATTAATTGGTTT+TGG | - | chr2.2:68417704-68417723 | MS.gene01472:CDS | 20.0% |
! | AATCTCCAATTTATGTCAAT+TGG | + | chr2.2:68418364-68418383 | None:intergenic | 25.0% |
! | ACAACTAGCAATTTAAAAAC+CGG | + | chr2.2:68418883-68418902 | None:intergenic | 25.0% |
! | ATAACAAATATAAGATCTGC+TGG | + | chr2.2:68419135-68419154 | None:intergenic | 25.0% |
! | CAAAAAGATGAAGATTTCAA+GGG | - | chr2.2:68418138-68418157 | MS.gene01472:intron | 25.0% |
! | CTAATTATTTATCTCTTTGC+AGG | - | chr2.2:68419001-68419020 | MS.gene01472:CDS | 25.0% |
! | GGATGAATAACATTGTTTAT+AGG | + | chr2.2:68419291-68419310 | None:intergenic | 25.0% |
! | TTCAGATATCTCTTTGAATT+TGG | + | chr2.2:68417616-68417635 | None:intergenic | 25.0% |
! | TTCATGACTCATAAATAAGA+TGG | - | chr2.2:68418228-68418247 | MS.gene01472:intron | 25.0% |
!! | TTTCCTTTGTTTGGTTAAAT+TGG | - | chr2.2:68418977-68418996 | MS.gene01472:CDS | 25.0% |
!!! | AAATTGCTAGTTGTTTTTGT+GGG | - | chr2.2:68418889-68418908 | MS.gene01472:CDS | 25.0% |
!!! | TAAATTGCTAGTTGTTTTTG+TGG | - | chr2.2:68418888-68418907 | MS.gene01472:CDS | 25.0% |
AAAAGTTGAACAGTTCAATC+TGG | - | chr2.2:68418781-68418800 | MS.gene01472:CDS | 30.0% | |
AAGTTCAACATCAATTCTCT+GGG | - | chr2.2:68418927-68418946 | MS.gene01472:CDS | 30.0% | |
AATTGGAATCAAGAAACTTC+TGG | - | chr2.2:68419431-68419450 | MS.gene01472:CDS | 30.0% | |
AGACCAATTTAACCAAACAA+AGG | + | chr2.2:68418983-68419002 | None:intergenic | 30.0% | |
ATCAAGATAGACATACAGAT+AGG | - | chr2.2:68418308-68418327 | MS.gene01472:intron | 30.0% | |
ATGATCAATATGGAGAAGAA+GGG | - | chr2.2:68417771-68417790 | MS.gene01472:CDS | 30.0% | |
ATTGAAGTTAAGTCATCCTA+TGG | + | chr2.2:68418464-68418483 | None:intergenic | 30.0% | |
CCAAAAAGATGAAGATTTCA+AGG | - | chr2.2:68418137-68418156 | MS.gene01472:intron | 30.0% | |
GAAGACCAATTGACATAAAT+TGG | - | chr2.2:68418356-68418375 | MS.gene01472:intron | 30.0% | |
GGAAAAAATTCAGCCAAAAT+TGG | + | chr2.2:68418962-68418981 | None:intergenic | 30.0% | |
TAACAATTGAAGTCAAACCA+GGG | - | chr2.2:68419049-68419068 | MS.gene01472:CDS | 30.0% | |
TAAGTCATCCATATGAAACA+CGG | + | chr2.2:68418603-68418622 | None:intergenic | 30.0% | |
TATGATCAATATGGAGAAGA+AGG | - | chr2.2:68417770-68417789 | MS.gene01472:CDS | 30.0% | |
TATTTGAGGGATTCTTATCA+GGG | + | chr2.2:68417578-68417597 | None:intergenic | 30.0% | |
TCATAAATTGCTTTCTTCTG+TGG | + | chr2.2:68417755-68417774 | None:intergenic | 30.0% | |
TTAACAATTGAAGTCAAACC+AGG | - | chr2.2:68419048-68419067 | MS.gene01472:CDS | 30.0% | |
TTACTTCATTTGATGAAGCT+AGG | - | chr2.2:68418029-68418048 | MS.gene01472:intron | 30.0% | |
TTATTTGAGGGATTCTTATC+AGG | + | chr2.2:68417579-68417598 | None:intergenic | 30.0% | |
! | AGACTACTACAAGATTTTGA+AGG | - | chr2.2:68417488-68417507 | MS.gene01472:CDS | 30.0% |
! | ATATCTTTGCAGAGTTTTTC+GGG | - | chr2.2:68417900-68417919 | MS.gene01472:intron | 30.0% |
! | CCTTGAAATCTTCATCTTTT+TGG | + | chr2.2:68418140-68418159 | None:intergenic | 30.0% |
! | GATATCTTTGCAGAGTTTTT+CGG | - | chr2.2:68417899-68417918 | MS.gene01472:CDS | 30.0% |
!!! | AATTGCTAGTTGTTTTTGTG+GGG | - | chr2.2:68418890-68418909 | MS.gene01472:CDS | 30.0% |
!!! | GCTGAATTTTTTCCTTTGTT+TGG | - | chr2.2:68418968-68418987 | MS.gene01472:CDS | 30.0% |
!!! | TGGTTTTGGTTTTTTGATGA+AGG | - | chr2.2:68417718-68417737 | MS.gene01472:CDS | 30.0% |
!!! | TTTGAAGGATCTTTTGGAAT+AGG | + | chr2.2:68419348-68419367 | None:intergenic | 30.0% |
AAAATCACATTCCCTGAGAA+AGG | - | chr2.2:68419087-68419106 | MS.gene01472:CDS | 35.0% | |
AAACCGTAATGTTACCTCAT+AGG | + | chr2.2:68417640-68417659 | None:intergenic | 35.0% | |
AAGATATCGTTTGCGTTTCT+TGG | + | chr2.2:68417887-68417906 | None:intergenic | 35.0% | |
AAGCCTATGAGGTAACATTA+CGG | - | chr2.2:68417634-68417653 | MS.gene01472:CDS | 35.0% | |
ATTGTTAAGATTTCCTCCAC+TGG | + | chr2.2:68419036-68419055 | None:intergenic | 35.0% | |
CATGGTGTATTTACAAGAGA+TGG | - | chr2.2:68419168-68419187 | MS.gene01472:CDS | 35.0% | |
CCAAAAGATCCTTCAAAGAA+GGG | - | chr2.2:68419351-68419370 | MS.gene01472:CDS | 35.0% | |
CTAAGATTACCCTTCTTTGA+AGG | + | chr2.2:68419363-68419382 | None:intergenic | 35.0% | |
CTATGAAGAGGTTATTCCAA+AGG | - | chr2.2:68419314-68419333 | MS.gene01472:CDS | 35.0% | |
CTTCAAAGAAGGGTAATCTT+AGG | - | chr2.2:68419361-68419380 | MS.gene01472:CDS | 35.0% | |
GAAGTTCAACATCAATTCTC+TGG | - | chr2.2:68418926-68418945 | MS.gene01472:CDS | 35.0% | |
GTTATTGATGAGAAACCACA+TGG | - | chr2.2:68419150-68419169 | MS.gene01472:CDS | 35.0% | |
TACAAGAGATGGCAATGATT+TGG | - | chr2.2:68419179-68419198 | MS.gene01472:CDS | 35.0% | |
TATTCATCCAAGCTATGAAG+AGG | - | chr2.2:68419302-68419321 | MS.gene01472:CDS | 35.0% | |
TCAATATCAAGTTTCCAGCT+AGG | - | chr2.2:68419391-68419410 | MS.gene01472:CDS | 35.0% | |
TCCAAAAGATCCTTCAAAGA+AGG | - | chr2.2:68419350-68419369 | MS.gene01472:CDS | 35.0% | |
TCTCTTGTAAATACACCATG+TGG | + | chr2.2:68419168-68419187 | None:intergenic | 35.0% | |
TGTCTAGTAATAGAGTCCAT+AGG | - | chr2.2:68418445-68418464 | MS.gene01472:intron | 35.0% | |
TTGACTTCTGAGCAGAAAAT+TGG | - | chr2.2:68419414-68419433 | MS.gene01472:CDS | 35.0% | |
TTTCTTCAACTCTTCTTCTG+TGG | + | chr2.2:68417526-68417545 | None:intergenic | 35.0% | |
! | AGGAGATTGATGAGTCTTTT+AGG | - | chr2.2:68418328-68418347 | MS.gene01472:intron | 35.0% |
! | TCAGCGTCTTTCTTATTTGA+GGG | + | chr2.2:68417591-68417610 | None:intergenic | 35.0% |
! | TGGGTCATAAGTTCCAATTT+TGG | - | chr2.2:68418946-68418965 | MS.gene01472:CDS | 35.0% |
AAACATTCCACCAAAGGATC+TGG | + | chr2.2:68417990-68418009 | None:intergenic | 40.0% | |
ACATTCTTCCAAAGTGGAGA+TGG | - | chr2.2:68417839-68417858 | MS.gene01472:CDS | 40.0% | |
ACCAAGACACATCTAATCCA+AGG | - | chr2.2:68418572-68418591 | MS.gene01472:intron | 40.0% | |
AGATCCTTTGGTGGAATGTT+TGG | - | chr2.2:68417989-68418008 | MS.gene01472:intron | 40.0% | |
AGATCTGCTGGTATCACATT+TGG | + | chr2.2:68419123-68419142 | None:intergenic | 40.0% | |
AGTCTTGAGGAGCTCTATAA+AGG | - | chr2.2:68418109-68418128 | MS.gene01472:intron | 40.0% | |
ATCGAAAACTTGCCATGAAG+TGG | - | chr2.2:68417550-68417569 | MS.gene01472:CDS | 40.0% | |
ATGGAGAAGAAGGGCTTAAA+GGG | - | chr2.2:68417780-68417799 | MS.gene01472:CDS | 40.0% | |
CTCAAATAAGAAAGACGCTG+AGG | - | chr2.2:68417590-68417609 | MS.gene01472:CDS | 40.0% | |
GAAGAGGTTATTCCAAAGGA+AGG | - | chr2.2:68419318-68419337 | MS.gene01472:CDS | 40.0% | |
GGAATAACCTCTTCATAGCT+TGG | + | chr2.2:68419312-68419331 | None:intergenic | 40.0% | |
GTCTTGAGGAGCTCTATAAA+GGG | - | chr2.2:68418110-68418129 | MS.gene01472:intron | 40.0% | |
GTTGCTCATTTCCTTTCTCA+GGG | + | chr2.2:68419101-68419120 | None:intergenic | 40.0% | |
TATGGAGAAGAAGGGCTTAA+AGG | - | chr2.2:68417779-68417798 | MS.gene01472:CDS | 40.0% | |
TTGAACACAAAACCTACCGA+AGG | + | chr2.2:68418837-68418856 | None:intergenic | 40.0% | |
! | AGAGATATCTGAAGCCTATG+AGG | - | chr2.2:68417623-68417642 | MS.gene01472:CDS | 40.0% |
! | CAATCTGGTTCAGTATGGTA+GGG | - | chr2.2:68418796-68418815 | MS.gene01472:CDS | 40.0% |
! | CACTTGCAGAAGCTTTAACA+GGG | - | chr2.2:68419220-68419239 | MS.gene01472:intron | 40.0% |
! | CAGTTCAATCTGGTTCAGTA+TGG | - | chr2.2:68418791-68418810 | MS.gene01472:CDS | 40.0% |
! | CTCAGCGTCTTTCTTATTTG+AGG | + | chr2.2:68417592-68417611 | None:intergenic | 40.0% |
! | GATTAGATGTGTCTTGGTGT+TGG | + | chr2.2:68418570-68418589 | None:intergenic | 40.0% |
! | TAGATTGCCTTGTAGTCTTG+AGG | - | chr2.2:68418096-68418115 | MS.gene01472:intron | 40.0% |
! | TCAATCTGGTTCAGTATGGT+AGG | - | chr2.2:68418795-68418814 | MS.gene01472:CDS | 40.0% |
! | TCACTTGCAGAAGCTTTAAC+AGG | - | chr2.2:68419219-68419238 | MS.gene01472:intron | 40.0% |
! | TCCTTGGATTAGATGTGTCT+TGG | + | chr2.2:68418576-68418595 | None:intergenic | 40.0% |
!! | ACGCATTGGTTTGGTTGATT+CGG | - | chr2.2:68418856-68418875 | MS.gene01472:CDS | 40.0% |
!! | AGGTTTTGTGTTCAACGCAT+TGG | - | chr2.2:68418842-68418861 | MS.gene01472:CDS | 40.0% |
!! | CCCTTCTTTGAAGGATCTTT+TGG | + | chr2.2:68419354-68419373 | None:intergenic | 40.0% |
!! | TTGTGTTCAACGCATTGGTT+TGG | - | chr2.2:68418847-68418866 | MS.gene01472:CDS | 40.0% |
ACCACCAAACATTCCACCAA+AGG | + | chr2.2:68417996-68418015 | None:intergenic | 45.0% | |
AGGGAAATTGCTGATGCAAG+TGG | - | chr2.2:68418157-68418176 | MS.gene01472:intron | 45.0% | |
AGTCAAACCAGGGTGGAAAA+AGG | - | chr2.2:68419059-68419078 | MS.gene01472:CDS | 45.0% | |
CAATTGAAGTCAAACCAGGG+TGG | - | chr2.2:68419052-68419071 | MS.gene01472:CDS | 45.0% | |
GACTAAGACAACGAGTCCTT+CGG | - | chr2.2:68418818-68418837 | MS.gene01472:CDS | 45.0% | |
GGAATAGGCATACCTTCCTT+TGG | + | chr2.2:68419333-68419352 | None:intergenic | 45.0% | |
GGATTGAACCTAAACGTCGT+TGG | + | chr2.2:68417866-68417885 | None:intergenic | 45.0% | |
GGGAAATTGCTGATGCAAGT+GGG | - | chr2.2:68418158-68418177 | MS.gene01472:intron | 45.0% | |
GGTTGCTCATTTCCTTTCTC+AGG | + | chr2.2:68419102-68419121 | None:intergenic | 45.0% | |
GTCAAACCAGGGTGGAAAAA+GGG | - | chr2.2:68419060-68419079 | MS.gene01472:CDS | 45.0% | |
TACTGTTCGTCTCACAACAC+TGG | - | chr2.2:68419245-68419264 | MS.gene01472:intron | 45.0% | |
TAGAGCTCCTCAAGACTACA+AGG | + | chr2.2:68418106-68418125 | None:intergenic | 45.0% | |
TATGAAACACGGACACTCCT+TGG | + | chr2.2:68418592-68418611 | None:intergenic | 45.0% | |
TCCTTTGGTGGAATGTTTGG+TGG | - | chr2.2:68417992-68418011 | MS.gene01472:intron | 45.0% | |
TTGCAGGAAAACTATGCCAG+TGG | - | chr2.2:68419017-68419036 | MS.gene01472:CDS | 45.0% | |
! | TTTGTTCCCTTTTTCCACCC+TGG | + | chr2.2:68419069-68419088 | None:intergenic | 45.0% |
!! | AGGAGTGTCCGTGTTTCATA+TGG | - | chr2.2:68418592-68418611 | MS.gene01472:intron | 45.0% |
!! | TTGGTTTGGTTGATTCGGTC+CGG | - | chr2.2:68418861-68418880 | MS.gene01472:CDS | 45.0% |
AAGACAACGAGTCCTTCGGT+AGG | - | chr2.2:68418822-68418841 | MS.gene01472:CDS | 50.0% | |
ATTCCTCCCATTCCCCCAAA+CGG | + | chr2.2:68417935-68417954 | None:intergenic | 50.0% | |
CAGGAAAACTATGCCAGTGG+AGG | - | chr2.2:68419020-68419039 | MS.gene01472:CDS | 50.0% | |
GAGATGGACCAACGACGTTT+AGG | - | chr2.2:68417855-68417874 | MS.gene01472:CDS | 50.0% | |
GGGGCTACATTCTTCCAAAG+TGG | - | chr2.2:68417833-68417852 | MS.gene01472:CDS | 50.0% | |
GTTCGTCTCACAACACTGGA+TGG | - | chr2.2:68419249-68419268 | MS.gene01472:intron | 50.0% | |
TCGGGTATTCAAGCCCGTTT+GGG | - | chr2.2:68417918-68417937 | MS.gene01472:intron | 50.0% | |
TCGTTGGTCCATCTCCACTT+TGG | + | chr2.2:68417850-68417869 | None:intergenic | 50.0% | |
TCTCACAACACTGGATGGCA+GGG | - | chr2.2:68419254-68419273 | MS.gene01472:intron | 50.0% | |
TGCTCAGAAGTCAACCTAGC+TGG | + | chr2.2:68419408-68419427 | None:intergenic | 50.0% | |
TTCGGGTATTCAAGCCCGTT+TGG | - | chr2.2:68417917-68417936 | MS.gene01472:intron | 50.0% | |
TTTGGGGGAATGGGAGGAAT+GGG | - | chr2.2:68417935-68417954 | MS.gene01472:intron | 50.0% | |
!! | CTTATCAGGGTGCCACTTCA+TGG | + | chr2.2:68417565-68417584 | None:intergenic | 50.0% |
!! | TCTTGGTGTTGGACACGCAT+CGG | + | chr2.2:68418559-68418578 | None:intergenic | 50.0% |
ACCTCAAGATGCTTCTGGCG+GGG | - | chr2.2:68417814-68417833 | MS.gene01472:CDS | 55.0% | |
AGAGGTGGAGCCAGATCCTT+TGG | - | chr2.2:68417977-68417996 | MS.gene01472:intron | 55.0% | |
CACCTCAAGATGCTTCTGGC+GGG | - | chr2.2:68417813-68417832 | MS.gene01472:CDS | 55.0% | |
CCACCACCTCAAGATGCTTC+TGG | - | chr2.2:68417809-68417828 | MS.gene01472:CDS | 55.0% | |
CCACCTCAAGATGCTTCTGG+CGG | - | chr2.2:68417812-68417831 | MS.gene01472:CDS | 55.0% | |
CGGGTATTCAAGCCCGTTTG+GGG | - | chr2.2:68417919-68417938 | MS.gene01472:intron | 55.0% | |
GCTGGTGGGAATGGAATGAG+AGG | - | chr2.2:68417959-68417978 | MS.gene01472:intron | 55.0% | |
GGGTATTCAAGCCCGTTTGG+GGG | - | chr2.2:68417920-68417939 | MS.gene01472:intron | 55.0% | |
GGTGGGAATGGAATGAGAGG+TGG | - | chr2.2:68417962-68417981 | MS.gene01472:intron | 55.0% | |
GTCTCACAACACTGGATGGC+AGG | - | chr2.2:68419253-68419272 | MS.gene01472:intron | 55.0% | |
GTTTGGGGGAATGGGAGGAA+TGG | - | chr2.2:68417934-68417953 | MS.gene01472:intron | 55.0% | |
TCAAGCCCGTTTGGGGGAAT+GGG | - | chr2.2:68417926-68417945 | MS.gene01472:intron | 55.0% | |
TCAATAGCAGCTGCCTTGCG+AGG | + | chr2.2:68418073-68418092 | None:intergenic | 55.0% | |
TTCAAGCCCGTTTGGGGGAA+TGG | - | chr2.2:68417925-68417944 | MS.gene01472:intron | 55.0% | |
TTCCTCCCATTCCCCCAAAC+GGG | + | chr2.2:68417934-68417953 | None:intergenic | 55.0% | |
TTGGGGGAATGGGAGGAATG+GGG | - | chr2.2:68417936-68417955 | MS.gene01472:intron | 55.0% | |
!! | CCAGAAGCATCTTGAGGTGG+TGG | + | chr2.2:68417812-68417831 | None:intergenic | 55.0% |
CGAGGACCTTGCTGACGCAT+AGG | + | chr2.2:68418055-68418074 | None:intergenic | 60.0% | |
GCTAGGCCTATGCGTCAGCA+AGG | - | chr2.2:68418046-68418065 | MS.gene01472:intron | 60.0% | |
GGTGGAGCCAGATCCTTTGG+TGG | - | chr2.2:68417980-68417999 | MS.gene01472:intron | 60.0% | |
TGGGGGAATGGGAGGAATGG+GGG | - | chr2.2:68417937-68417956 | MS.gene01472:intron | 60.0% | |
!! | CCGCCAGAAGCATCTTGAGG+TGG | + | chr2.2:68417815-68417834 | None:intergenic | 60.0% |
AGCCCGTTTGGGGGAATGGG+AGG | - | chr2.2:68417929-68417948 | MS.gene01472:intron | 65.0% | |
ATGGGAGGAATGGGGGCTGG+TGG | - | chr2.2:68417944-68417963 | MS.gene01472:intron | 65.0% | |
GCGTCAGCAAGGTCCTCGCA+AGG | - | chr2.2:68418057-68418076 | MS.gene01472:intron | 65.0% | |
GGAATGGGAGGAATGGGGGC+TGG | - | chr2.2:68417941-68417960 | MS.gene01472:intron | 65.0% | |
! | GGAATGGGGGCTGGTGGGAA+TGG | - | chr2.2:68417950-68417969 | MS.gene01472:intron | 65.0% |
! | TGGGAGGAATGGGGGCTGGT+GGG | - | chr2.2:68417945-68417964 | MS.gene01472:intron | 65.0% |
!! | GCCCCGCCAGAAGCATCTTG+AGG | + | chr2.2:68417818-68417837 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 68417480 | 68419461 | 68417480 | ID=MS.gene01472 |
chr2.2 | mRNA | 68417480 | 68419461 | 68417480 | ID=MS.gene01472.t1;Parent=MS.gene01472 |
chr2.2 | exon | 68419297 | 68419461 | 68419297 | ID=MS.gene01472.t1.exon1;Parent=MS.gene01472.t1 |
chr2.2 | CDS | 68419297 | 68419461 | 68419297 | ID=cds.MS.gene01472.t1;Parent=MS.gene01472.t1 |
chr2.2 | exon | 68418762 | 68419201 | 68418762 | ID=MS.gene01472.t1.exon2;Parent=MS.gene01472.t1 |
chr2.2 | CDS | 68418762 | 68419201 | 68418762 | ID=cds.MS.gene01472.t1;Parent=MS.gene01472.t1 |
chr2.2 | exon | 68417480 | 68417918 | 68417480 | ID=MS.gene01472.t1.exon3;Parent=MS.gene01472.t1 |
chr2.2 | CDS | 68417480 | 68417918 | 68417480 | ID=cds.MS.gene01472.t1;Parent=MS.gene01472.t1 |
Gene Sequence |
Protein sequence |