Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene002499.t1 | XP_003593642.1 | 94.2 | 347 | 13 | 2 | 1 | 347 | 1 | 340 | 3.50E-182 | 647.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene002499.t1 | Q5R8J8 | 43.9 | 358 | 164 | 8 | 1 | 345 | 1 | 334 | 2.0e-69 | 264.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene002499.t1 | A2Q505 | 94.2 | 347 | 13 | 2 | 1 | 347 | 1 | 340 | 2.5e-182 | 647.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene045555 | MS.gene002499 | PPI |
| MS.gene002499 | MS.gene75767 | PPI |
| MS.gene01472 | MS.gene002499 | PPI |
| MS.gene007227 | MS.gene002499 | PPI |
| MS.gene002499 | MS.gene037465 | PPI |
| MS.gene034468 | MS.gene002499 | PPI |
| MS.gene50013 | MS.gene002499 | PPI |
| MS.gene002499 | MS.gene77100 | PPI |
| MS.gene002499 | MS.gene050322 | PPI |
| MS.gene66767 | MS.gene002499 | PPI |
| MS.gene002499 | MS.gene50004 | PPI |
| MS.gene43051 | MS.gene002499 | PPI |
| MS.gene002499 | MS.gene031675 | PPI |
| MS.gene072961 | MS.gene002499 | PPI |
| MS.gene014782 | MS.gene002499 | PPI |
| MS.gene002499 | MS.gene84339 | PPI |
| MS.gene002499 | MS.gene35396 | PPI |
| MS.gene01038 | MS.gene002499 | PPI |
| MS.gene006630 | MS.gene002499 | PPI |
| MS.gene002499 | MS.gene047354 | PPI |
| MS.gene066761 | MS.gene002499 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene002499.t1 | MTR_2g014470 | 96.830 | 347 | 4 | 2 | 1 | 347 | 1 | 340 | 0.0 | 680 |
| MS.gene002499.t1 | MTR_4g078850 | 78.510 | 349 | 67 | 4 | 1 | 346 | 1 | 344 | 0.0 | 536 |
| MS.gene002499.t1 | MTR_4g015840 | 69.452 | 347 | 97 | 4 | 1 | 346 | 1 | 339 | 8.56e-168 | 471 |
| MS.gene002499.t1 | MTR_2g090705 | 69.429 | 350 | 88 | 3 | 1 | 346 | 1 | 335 | 5.27e-163 | 459 |
| MS.gene002499.t1 | MTR_2g014480 | 68.605 | 344 | 92 | 6 | 1 | 336 | 1 | 336 | 2.44e-152 | 432 |
| MS.gene002499.t1 | MTR_3g108020 | 55.652 | 345 | 133 | 4 | 1 | 345 | 1 | 325 | 8.73e-128 | 369 |
| MS.gene002499.t1 | MTR_4g015840 | 68.924 | 251 | 72 | 3 | 97 | 346 | 17 | 262 | 5.43e-114 | 332 |
| MS.gene002499.t1 | MTR_3g437360 | 38.872 | 337 | 196 | 7 | 2 | 329 | 3 | 338 | 4.72e-68 | 217 |
| MS.gene002499.t1 | MTR_5g037880 | 54.237 | 177 | 81 | 0 | 169 | 345 | 98 | 274 | 2.62e-66 | 211 |
| MS.gene002499.t1 | MTR_5g037880 | 60.000 | 75 | 23 | 1 | 4 | 71 | 5 | 79 | 7.54e-21 | 91.3 |
| MS.gene002499.t1 | MTR_3g437840 | 51.553 | 161 | 78 | 0 | 186 | 346 | 2 | 162 | 4.47e-54 | 175 |
| MS.gene002499.t1 | MTR_7g109340 | 32.464 | 345 | 201 | 6 | 5 | 345 | 27 | 343 | 2.00e-50 | 171 |
| MS.gene002499.t1 | MTR_2g006890 | 45.000 | 180 | 98 | 1 | 167 | 345 | 196 | 375 | 2.46e-44 | 156 |
| MS.gene002499.t1 | MTR_3g088140 | 42.857 | 182 | 103 | 1 | 165 | 345 | 172 | 353 | 5.57e-44 | 155 |
| MS.gene002499.t1 | MTR_8g006430 | 33.333 | 387 | 173 | 12 | 5 | 345 | 15 | 362 | 6.52e-44 | 156 |
| MS.gene002499.t1 | MTR_3g087030 | 28.065 | 367 | 215 | 11 | 4 | 344 | 82 | 425 | 4.39e-32 | 125 |
| MS.gene002499.t1 | MTR_3g437850 | 35.610 | 205 | 89 | 5 | 3 | 202 | 1 | 167 | 5.10e-32 | 118 |
| MS.gene002499.t1 | MTR_2g087660 | 33.511 | 188 | 117 | 4 | 161 | 345 | 176 | 358 | 2.67e-25 | 105 |
| MS.gene002499.t1 | MTR_2g087660 | 60.563 | 71 | 23 | 2 | 5 | 75 | 14 | 79 | 5.19e-12 | 67.0 |
| MS.gene002499.t1 | MTR_4g050420 | 32.979 | 188 | 118 | 4 | 161 | 345 | 174 | 356 | 9.83e-25 | 104 |
| MS.gene002499.t1 | MTR_4g050420 | 59.155 | 71 | 24 | 2 | 5 | 75 | 14 | 79 | 3.88e-11 | 64.3 |
| MS.gene002499.t1 | MTR_5g065160 | 26.685 | 371 | 211 | 12 | 4 | 344 | 82 | 421 | 3.99e-23 | 100 |
| MS.gene002499.t1 | MTR_5g065160 | 26.954 | 371 | 210 | 12 | 4 | 344 | 83 | 422 | 4.02e-23 | 100 |
| MS.gene002499.t1 | MTR_5g065160 | 26.685 | 371 | 211 | 12 | 4 | 344 | 76 | 415 | 4.16e-23 | 100 |
| MS.gene002499.t1 | MTR_5g065160 | 26.685 | 371 | 211 | 12 | 4 | 344 | 83 | 422 | 5.79e-23 | 99.8 |
| MS.gene002499.t1 | MTR_2g104030 | 44.697 | 132 | 51 | 4 | 4 | 135 | 70 | 179 | 2.36e-21 | 95.1 |
| MS.gene002499.t1 | MTR_7g101070 | 60.000 | 65 | 26 | 0 | 4 | 68 | 358 | 422 | 4.72e-20 | 91.3 |
| MS.gene002499.t1 | MTR_7g112360 | 46.970 | 66 | 32 | 1 | 5 | 67 | 17 | 82 | 4.64e-16 | 75.1 |
| MS.gene002499.t1 | MTR_7g069480 | 51.429 | 70 | 32 | 1 | 3 | 72 | 26 | 93 | 7.22e-16 | 79.0 |
| MS.gene002499.t1 | MTR_7g112360 | 46.970 | 66 | 32 | 1 | 5 | 67 | 17 | 82 | 7.65e-16 | 73.2 |
| MS.gene002499.t1 | MTR_5g012530 | 48.649 | 74 | 36 | 1 | 4 | 75 | 12 | 85 | 9.97e-16 | 78.6 |
| MS.gene002499.t1 | MTR_3g027580 | 52.113 | 71 | 33 | 1 | 4 | 74 | 89 | 158 | 2.53e-15 | 77.0 |
| MS.gene002499.t1 | MTR_2g087660 | 32.836 | 134 | 84 | 3 | 161 | 293 | 176 | 304 | 2.85e-15 | 76.3 |
| MS.gene002499.t1 | MTR_2g087660 | 60.563 | 71 | 23 | 2 | 5 | 75 | 14 | 79 | 3.02e-12 | 67.0 |
| MS.gene002499.t1 | MTR_6g471050 | 25.000 | 352 | 204 | 16 | 30 | 346 | 7 | 333 | 3.70e-15 | 76.6 |
| MS.gene002499.t1 | MTR_6g027110 | 44.000 | 75 | 38 | 1 | 3 | 73 | 1 | 75 | 5.93e-15 | 71.6 |
| MS.gene002499.t1 | MTR_5g065860 | 50.000 | 64 | 31 | 1 | 4 | 67 | 48 | 110 | 6.72e-15 | 71.6 |
| MS.gene002499.t1 | MTR_1g110310 | 49.296 | 71 | 35 | 1 | 4 | 74 | 16 | 85 | 1.58e-14 | 74.3 |
| MS.gene002499.t1 | MTR_6g027030 | 45.333 | 75 | 37 | 1 | 3 | 73 | 1 | 75 | 1.82e-14 | 72.0 |
| MS.gene002499.t1 | MTR_8g022310 | 44.928 | 69 | 33 | 1 | 4 | 67 | 10 | 78 | 3.21e-14 | 71.2 |
| MS.gene002499.t1 | MTR_8g022310 | 44.928 | 69 | 33 | 1 | 4 | 67 | 10 | 78 | 4.94e-14 | 70.5 |
| MS.gene002499.t1 | MTR_4g085070 | 50.000 | 60 | 27 | 1 | 11 | 67 | 19 | 78 | 4.99e-14 | 69.3 |
| MS.gene002499.t1 | MTR_8g022310 | 43.478 | 69 | 34 | 1 | 4 | 67 | 10 | 78 | 5.28e-14 | 70.5 |
| MS.gene002499.t1 | MTR_8g022310 | 43.478 | 69 | 34 | 1 | 4 | 67 | 10 | 78 | 7.16e-14 | 70.9 |
| MS.gene002499.t1 | MTR_5g035770 | 47.945 | 73 | 37 | 1 | 4 | 76 | 25 | 96 | 1.76e-13 | 71.2 |
| MS.gene002499.t1 | MTR_6g026940 | 44.928 | 69 | 34 | 1 | 3 | 67 | 1 | 69 | 2.06e-13 | 68.2 |
| MS.gene002499.t1 | MTR_1g052110 | 47.692 | 65 | 33 | 1 | 6 | 70 | 40 | 103 | 2.96e-13 | 69.7 |
| MS.gene002499.t1 | MTR_4g023470 | 39.167 | 120 | 59 | 4 | 5 | 123 | 87 | 193 | 5.80e-13 | 69.7 |
| MS.gene002499.t1 | MTR_2g436560 | 38.710 | 124 | 64 | 5 | 4 | 123 | 104 | 219 | 1.34e-12 | 68.6 |
| MS.gene002499.t1 | MTR_7g092380 | 42.105 | 76 | 40 | 2 | 6 | 78 | 24 | 98 | 4.27e-12 | 66.2 |
| MS.gene002499.t1 | MTR_1g029460 | 41.667 | 72 | 41 | 1 | 3 | 74 | 5 | 75 | 4.99e-12 | 67.0 |
| MS.gene002499.t1 | MTR_5g004570 | 45.070 | 71 | 38 | 1 | 4 | 74 | 6 | 75 | 1.63e-11 | 63.9 |
| MS.gene002499.t1 | MTR_1g087580 | 34.646 | 127 | 76 | 3 | 224 | 345 | 59 | 183 | 5.41e-11 | 61.6 |
| MS.gene002499.t1 | MTR_4g094275 | 41.558 | 77 | 40 | 3 | 2 | 75 | 49 | 123 | 8.55e-11 | 60.8 |
| MS.gene002499.t1 | MTR_4g109510 | 44.118 | 68 | 35 | 1 | 5 | 69 | 9 | 76 | 9.19e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene002499.t1 | AT2G20560 | 74.000 | 350 | 72 | 4 | 1 | 345 | 1 | 336 | 0.0 | 516 |
| MS.gene002499.t1 | AT4G28480 | 69.101 | 356 | 90 | 3 | 1 | 345 | 1 | 347 | 9.17e-171 | 479 |
| MS.gene002499.t1 | AT3G08910 | 66.185 | 346 | 92 | 6 | 1 | 346 | 1 | 321 | 3.31e-160 | 451 |
| MS.gene002499.t1 | AT5G01390 | 63.143 | 350 | 111 | 4 | 1 | 347 | 1 | 335 | 1.67e-155 | 440 |
| MS.gene002499.t1 | AT4G28480 | 60.870 | 345 | 79 | 3 | 1 | 345 | 1 | 289 | 1.15e-141 | 403 |
| MS.gene002499.t1 | AT5G25530 | 58.757 | 354 | 122 | 7 | 1 | 346 | 1 | 338 | 9.37e-139 | 397 |
| MS.gene002499.t1 | AT5G25530 | 57.459 | 362 | 122 | 8 | 1 | 346 | 1 | 346 | 6.59e-136 | 390 |
| MS.gene002499.t1 | AT1G10350 | 56.196 | 347 | 149 | 3 | 1 | 345 | 1 | 346 | 5.83e-129 | 373 |
| MS.gene002499.t1 | AT3G47940 | 53.740 | 361 | 136 | 4 | 1 | 345 | 1 | 346 | 2.58e-127 | 369 |
| MS.gene002499.t1 | AT1G59725 | 54.598 | 348 | 135 | 3 | 1 | 345 | 1 | 328 | 6.57e-126 | 364 |
| MS.gene002499.t1 | AT2G20550 | 55.326 | 291 | 72 | 4 | 103 | 345 | 3 | 283 | 6.78e-99 | 294 |
| MS.gene002499.t1 | AT2G20550 | 55.326 | 291 | 72 | 4 | 103 | 345 | 3 | 283 | 6.78e-99 | 294 |
| MS.gene002499.t1 | AT5G01390 | 45.533 | 347 | 119 | 7 | 1 | 347 | 1 | 277 | 1.58e-89 | 270 |
| MS.gene002499.t1 | AT5G01390 | 55.238 | 210 | 76 | 4 | 1 | 207 | 1 | 195 | 1.25e-68 | 215 |
| MS.gene002499.t1 | AT5G01390 | 61.029 | 136 | 48 | 2 | 1 | 135 | 1 | 132 | 2.62e-49 | 166 |
| MS.gene002499.t1 | AT5G01390 | 55.634 | 142 | 24 | 1 | 206 | 347 | 136 | 238 | 6.78e-44 | 151 |
| MS.gene002499.t1 | AT1G44160 | 47.753 | 178 | 93 | 0 | 168 | 345 | 176 | 353 | 4.02e-47 | 163 |
| MS.gene002499.t1 | AT3G62600 | 32.378 | 349 | 206 | 7 | 2 | 346 | 24 | 346 | 3.47e-45 | 158 |
| MS.gene002499.t1 | AT1G11040 | 43.353 | 173 | 98 | 0 | 166 | 338 | 253 | 425 | 9.28e-43 | 154 |
| MS.gene002499.t1 | AT3G44110 | 33.702 | 362 | 201 | 11 | 5 | 345 | 15 | 358 | 2.00e-39 | 144 |
| MS.gene002499.t1 | AT5G22060 | 33.149 | 362 | 204 | 10 | 5 | 345 | 15 | 359 | 2.06e-37 | 139 |
| MS.gene002499.t1 | AT3G44110 | 33.735 | 332 | 181 | 11 | 5 | 315 | 15 | 328 | 7.90e-33 | 125 |
| MS.gene002499.t1 | AT1G80030 | 28.647 | 377 | 209 | 13 | 4 | 344 | 75 | 427 | 2.83e-29 | 117 |
| MS.gene002499.t1 | AT1G80030 | 28.647 | 377 | 209 | 13 | 4 | 344 | 75 | 427 | 3.91e-29 | 117 |
| MS.gene002499.t1 | AT1G80030 | 28.647 | 377 | 209 | 13 | 4 | 344 | 75 | 427 | 3.91e-29 | 117 |
| MS.gene002499.t1 | AT1G80030 | 28.647 | 377 | 209 | 13 | 4 | 344 | 75 | 427 | 3.91e-29 | 117 |
| MS.gene002499.t1 | AT2G22360 | 65.333 | 75 | 20 | 2 | 4 | 76 | 86 | 156 | 6.98e-22 | 96.3 |
| MS.gene002499.t1 | AT2G22360 | 30.147 | 136 | 91 | 3 | 211 | 344 | 295 | 428 | 5.43e-12 | 67.0 |
| MS.gene002499.t1 | AT3G17830 | 53.261 | 92 | 37 | 2 | 2 | 91 | 61 | 148 | 5.39e-21 | 94.4 |
| MS.gene002499.t1 | AT4G39960 | 58.904 | 73 | 28 | 1 | 4 | 76 | 85 | 155 | 2.40e-20 | 92.0 |
| MS.gene002499.t1 | AT4G39960 | 30.147 | 136 | 91 | 3 | 211 | 344 | 301 | 434 | 2.00e-12 | 68.2 |
| MS.gene002499.t1 | AT4G39960 | 58.904 | 73 | 28 | 1 | 4 | 76 | 85 | 155 | 2.40e-20 | 92.0 |
| MS.gene002499.t1 | AT4G39960 | 30.147 | 136 | 91 | 3 | 211 | 344 | 301 | 434 | 2.00e-12 | 68.2 |
| MS.gene002499.t1 | AT5G48030 | 46.903 | 113 | 50 | 3 | 4 | 116 | 94 | 196 | 8.37e-18 | 84.7 |
| MS.gene002499.t1 | AT5G16650 | 59.375 | 64 | 25 | 1 | 4 | 67 | 11 | 73 | 6.47e-17 | 77.8 |
| MS.gene002499.t1 | AT5G03160 | 53.846 | 65 | 30 | 0 | 4 | 68 | 370 | 434 | 6.61e-17 | 82.0 |
| MS.gene002499.t1 | AT5G16650 | 59.375 | 64 | 25 | 1 | 4 | 67 | 11 | 73 | 8.20e-17 | 76.3 |
| MS.gene002499.t1 | AT1G59980 | 47.826 | 69 | 35 | 1 | 6 | 74 | 25 | 92 | 1.55e-15 | 77.4 |
| MS.gene002499.t1 | AT2G41000 | 47.826 | 69 | 32 | 1 | 3 | 67 | 2 | 70 | 1.63e-15 | 75.1 |
| MS.gene002499.t1 | AT1G68370 | 52.113 | 71 | 33 | 1 | 4 | 74 | 17 | 86 | 2.20e-15 | 77.0 |
| MS.gene002499.t1 | AT1G56300 | 48.485 | 66 | 31 | 1 | 5 | 67 | 14 | 79 | 2.36e-15 | 73.2 |
| MS.gene002499.t1 | AT1G56300 | 48.485 | 66 | 31 | 1 | 5 | 67 | 14 | 79 | 2.53e-15 | 72.0 |
| MS.gene002499.t1 | AT1G59980 | 47.826 | 69 | 35 | 1 | 6 | 74 | 25 | 92 | 4.08e-15 | 76.3 |
| MS.gene002499.t1 | AT2G41000 | 47.826 | 69 | 32 | 1 | 3 | 67 | 2 | 70 | 5.61e-15 | 72.8 |
| MS.gene002499.t1 | AT3G08970 | 51.316 | 76 | 33 | 2 | 2 | 77 | 25 | 96 | 1.88e-14 | 74.7 |
| MS.gene002499.t1 | AT3G08970 | 51.316 | 76 | 33 | 2 | 2 | 77 | 25 | 96 | 1.88e-14 | 74.7 |
| MS.gene002499.t1 | AT2G35720 | 47.945 | 73 | 36 | 1 | 4 | 74 | 15 | 87 | 3.16e-14 | 73.9 |
| MS.gene002499.t1 | AT2G21510 | 50.000 | 72 | 35 | 1 | 4 | 75 | 6 | 76 | 1.68e-13 | 71.2 |
| MS.gene002499.t1 | AT2G21510 | 50.000 | 72 | 35 | 1 | 4 | 75 | 6 | 76 | 1.68e-13 | 71.2 |
| MS.gene002499.t1 | AT2G21510 | 50.000 | 72 | 35 | 1 | 4 | 75 | 6 | 76 | 1.74e-13 | 71.2 |
| MS.gene002499.t1 | AT2G21510 | 50.000 | 72 | 35 | 1 | 4 | 75 | 6 | 76 | 1.74e-13 | 71.2 |
| MS.gene002499.t1 | AT2G21510 | 50.000 | 72 | 35 | 1 | 4 | 75 | 6 | 76 | 2.30e-13 | 70.5 |
| MS.gene002499.t1 | AT2G33735 | 43.077 | 65 | 36 | 1 | 4 | 68 | 22 | 85 | 1.05e-12 | 64.7 |
| MS.gene002499.t1 | AT2G33735 | 43.077 | 65 | 36 | 1 | 4 | 68 | 22 | 85 | 1.05e-12 | 64.7 |
| MS.gene002499.t1 | AT1G71000 | 45.455 | 66 | 33 | 1 | 5 | 67 | 9 | 74 | 1.66e-12 | 65.5 |
| MS.gene002499.t1 | AT1G24120 | 44.595 | 74 | 40 | 1 | 4 | 77 | 20 | 92 | 1.75e-12 | 68.6 |
| MS.gene002499.t1 | AT5G06910 | 46.154 | 65 | 34 | 1 | 6 | 70 | 31 | 94 | 2.02e-12 | 67.4 |
| MS.gene002499.t1 | AT1G71000 | 45.455 | 66 | 33 | 1 | 5 | 67 | 9 | 74 | 3.62e-12 | 64.3 |
| MS.gene002499.t1 | AT5G05750 | 36.283 | 113 | 61 | 3 | 4 | 116 | 114 | 215 | 5.63e-12 | 66.2 |
| MS.gene002499.t1 | AT4G39150 | 47.222 | 72 | 37 | 1 | 4 | 75 | 6 | 76 | 5.67e-12 | 66.6 |
| MS.gene002499.t1 | AT4G39150 | 47.222 | 72 | 37 | 1 | 4 | 75 | 6 | 76 | 5.67e-12 | 66.6 |
| MS.gene002499.t1 | AT4G39150 | 47.222 | 72 | 37 | 1 | 4 | 75 | 6 | 76 | 5.67e-12 | 66.6 |
| MS.gene002499.t1 | AT3G14200 | 45.312 | 64 | 33 | 1 | 6 | 67 | 14 | 77 | 7.05e-12 | 64.7 |
| MS.gene002499.t1 | AT3G13310 | 46.774 | 62 | 29 | 1 | 6 | 67 | 66 | 123 | 2.17e-11 | 62.0 |
| MS.gene002499.t1 | AT1G21080 | 43.038 | 79 | 44 | 1 | 3 | 81 | 5 | 82 | 2.45e-11 | 64.7 |
| MS.gene002499.t1 | AT1G21080 | 43.038 | 79 | 44 | 1 | 3 | 81 | 5 | 82 | 2.56e-11 | 64.7 |
| MS.gene002499.t1 | AT4G13830 | 38.806 | 67 | 40 | 1 | 3 | 68 | 65 | 131 | 2.76e-11 | 61.6 |
| MS.gene002499.t1 | AT5G49060 | 46.269 | 67 | 34 | 1 | 4 | 70 | 99 | 163 | 3.26e-11 | 64.3 |
| MS.gene002499.t1 | AT5G49060 | 46.269 | 67 | 34 | 1 | 4 | 70 | 99 | 163 | 3.26e-11 | 64.3 |
| MS.gene002499.t1 | AT4G13830 | 38.806 | 67 | 40 | 1 | 3 | 68 | 65 | 131 | 3.84e-11 | 62.0 |
| MS.gene002499.t1 | AT1G72416 | 34.831 | 89 | 49 | 2 | 4 | 90 | 5 | 86 | 4.34e-11 | 62.0 |
| MS.gene002499.t1 | AT1G72416 | 34.444 | 90 | 50 | 2 | 4 | 91 | 5 | 87 | 6.57e-11 | 61.2 |
| MS.gene002499.t1 | AT3G12170 | 43.077 | 65 | 36 | 1 | 6 | 70 | 13 | 76 | 6.90e-11 | 62.4 |
| MS.gene002499.t1 | AT1G72416 | 34.444 | 90 | 50 | 2 | 4 | 91 | 5 | 87 | 7.61e-11 | 61.2 |
| MS.gene002499.t1 | AT1G72416 | 34.444 | 90 | 50 | 2 | 4 | 91 | 5 | 87 | 7.97e-11 | 61.2 |
| MS.gene002499.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 9.41e-11 | 63.2 |
| MS.gene002499.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 9.41e-11 | 63.2 |
| MS.gene002499.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 9.41e-11 | 63.2 |
| MS.gene002499.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 9.41e-11 | 63.2 |
| MS.gene002499.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 9.41e-11 | 63.2 |
| MS.gene002499.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 9.41e-11 | 63.2 |
| MS.gene002499.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 9.41e-11 | 63.2 |
| MS.gene002499.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 9.41e-11 | 63.2 |
| MS.gene002499.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 9.41e-11 | 63.2 |
Find 90 sgRNAs with CRISPR-Local
Find 151 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTTCTTTGAAGGATCTTT+TGG | 0.174093 | 2.1:+70584470 | None:intergenic |
| TTCAGATATCTCTTTGAATT+TGG | 0.183628 | 2.1:+70586101 | None:intergenic |
| AAGATATCGTTTGCGTTTCT+TGG | 0.221316 | 2.1:+70585802 | None:intergenic |
| TTATTTGAGGGATTCTTATC+AGG | 0.267987 | 2.1:+70586138 | None:intergenic |
| GGATGAATAACATTGTTTAT+AGG | 0.269485 | 2.1:+70584533 | None:intergenic |
| GGTTGCTCATTTCCTTTCTC+AGG | 0.283976 | 2.1:+70584722 | None:intergenic |
| TATGGAGAAGAAGGGCTTAA+AGG | 0.285303 | 2.1:-70585907 | MS.gene002499:CDS |
| AGTCAAACCAGGGTGGAAAA+AGG | 0.301287 | 2.1:-70584762 | MS.gene002499:CDS |
| TCGGGTATTCAAGCCCGTTT+GGG | 0.303828 | 2.1:-70585768 | MS.gene002499:CDS |
| TGCTCAGAAGTCAACCTTGC+TGG | 0.309488 | 2.1:+70584416 | None:intergenic |
| TTCGGGTATTCAAGCCCGTT+TGG | 0.333587 | 2.1:-70585769 | MS.gene002499:CDS |
| AGTCTTGAGGAGCTCTATAA+AGG | 0.348476 | 2.1:-70585577 | MS.gene002499:CDS |
| AAAGCAATTTATGATCAATA+TGG | 0.348727 | 2.1:-70585925 | MS.gene002499:CDS |
| CTTATCAGGGTGCCACTTCA+TGG | 0.353470 | 2.1:+70586152 | None:intergenic |
| CTTCAAAGAAGGGTAATCTT+AGG | 0.357619 | 2.1:-70584460 | MS.gene002499:CDS |
| TACAAGAGATGGCAATGATT+TGG | 0.359667 | 2.1:-70584642 | MS.gene002499:CDS |
| CTAAGATTACCCTTCTTTGA+AGG | 0.367122 | 2.1:+70584461 | None:intergenic |
| AGATCTGCTGGTATCACATT+TGG | 0.371997 | 2.1:+70584701 | None:intergenic |
| AGATCCTTTGGTGGAATGTT+TGG | 0.375285 | 2.1:-70585697 | MS.gene002499:CDS |
| CTCAGCGTCTTTCTTATTTG+AGG | 0.384413 | 2.1:+70586125 | None:intergenic |
| GGAATAGGCATACCTTCCTT+TGG | 0.388950 | 2.1:+70584491 | None:intergenic |
| CCACCACCTCAAGATGCTTC+TGG | 0.389485 | 2.1:-70585877 | MS.gene002499:CDS |
| GAGATGGACCAACAACGTTT+AGG | 0.400923 | 2.1:-70585831 | MS.gene002499:CDS |
| ATGGAGAAGAAGGGCTTAAA+GGG | 0.402600 | 2.1:-70585906 | MS.gene002499:CDS |
| AGAGGTGGAGCCAGATCCTT+TGG | 0.409550 | 2.1:-70585709 | MS.gene002499:CDS |
| TCACTAGCAGAAGCTTTAAC+AGG | 0.415182 | 2.1:-70584602 | MS.gene002499:CDS |
| CACCTCAAGATGCTTCTGGC+GGG | 0.421807 | 2.1:-70585873 | MS.gene002499:CDS |
| GGAATAACCTCTTCATAGCT+TGG | 0.426392 | 2.1:+70584512 | None:intergenic |
| AGTTGGAATCAAGAAACTTC+TGG | 0.427430 | 2.1:-70584390 | MS.gene002499:CDS |
| AAACCGTAATGTTACCTCAT+AGG | 0.442940 | 2.1:+70586077 | None:intergenic |
| TATGATCAATATGGAGAAGA+AGG | 0.445033 | 2.1:-70585916 | MS.gene002499:CDS |
| GTCTCACAACACTGGATGGC+AGG | 0.445115 | 2.1:-70584568 | MS.gene002499:CDS |
| TCAGCGTCTTTCTTATTTGA+GGG | 0.447077 | 2.1:+70586126 | None:intergenic |
| TTGACTTCTGAGCAGAAAGT+TGG | 0.447653 | 2.1:-70584407 | MS.gene002499:CDS |
| TCATAAATTGCTTTCTTCTG+TGG | 0.457705 | 2.1:+70585934 | None:intergenic |
| GTCTTGAGGAGCTCTATAAA+GGG | 0.464624 | 2.1:-70585576 | MS.gene002499:CDS |
| TCCAAAAGATCCTTCAAAGA+AGG | 0.470055 | 2.1:-70584471 | MS.gene002499:CDS |
| GTTGCTCATTTCCTTTCTCA+GGG | 0.474664 | 2.1:+70584723 | None:intergenic |
| TATTTGAGGGATTCTTATCA+GGG | 0.478544 | 2.1:+70586139 | None:intergenic |
| GGATTGAACCTAAACGTTGT+TGG | 0.479222 | 2.1:+70585823 | None:intergenic |
| TCCTTTGGTGGAATGTTTGG+TGG | 0.483436 | 2.1:-70585694 | MS.gene002499:CDS |
| ATAACAAATATAAGATCTGC+TGG | 0.490598 | 2.1:+70584689 | None:intergenic |
| AAACATTCCACCAAAGGATC+TGG | 0.493654 | 2.1:+70585699 | None:intergenic |
| AAAATCACATTCCCTGAGAA+AGG | 0.497224 | 2.1:-70584734 | MS.gene002499:CDS |
| ATTGTTAAGATTTCCTCCAC+TGG | 0.504925 | 2.1:+70584788 | None:intergenic |
| GCTGGTGGGAATGGAATGAG+AGG | 0.505271 | 2.1:-70585727 | MS.gene002499:CDS |
| CCAGAAGCATCTTGAGGTGG+TGG | 0.511552 | 2.1:+70585877 | None:intergenic |
| TTTCTTCAACTCTTCTTCTG+TGG | 0.512491 | 2.1:+70586191 | None:intergenic |
| ACATTCTTCCAAAGTGGAGA+TGG | 0.515684 | 2.1:-70585847 | MS.gene002499:CDS |
| CCAAAAGATCCTTCAAAGAA+GGG | 0.516873 | 2.1:-70584470 | MS.gene002499:CDS |
| TTACTTCATTTGATGAAGCT+AGG | 0.518857 | 2.1:-70585657 | MS.gene002499:CDS |
| AGAGATATCTGAAGCCTATG+AGG | 0.524531 | 2.1:-70586091 | MS.gene002499:intron |
| CGAGGACCTTGCTGACGCAT+AGG | 0.535830 | 2.1:+70585634 | None:intergenic |
| CATGGTGTATTTACAAGAGA+TGG | 0.542850 | 2.1:-70584653 | MS.gene002499:CDS |
| CCACCTCAAGATGCTTCTGG+CGG | 0.544744 | 2.1:-70585874 | MS.gene002499:CDS |
| ATCGAAAACTTGCCATGAAG+TGG | 0.546006 | 2.1:-70586164 | MS.gene002499:CDS |
| TAGATTGCCTTGTAGTCTTG+AGG | 0.546637 | 2.1:-70585590 | MS.gene002499:CDS |
| CACTGTTCGTCTCACAACAC+TGG | 0.550423 | 2.1:-70584576 | MS.gene002499:CDS |
| TTGTTGGTCCATCTCCACTT+TGG | 0.559606 | 2.1:+70585839 | None:intergenic |
| TAGAGCTCCTCAAGACTACA+AGG | 0.560767 | 2.1:+70585583 | None:intergenic |
| TCAATAGCAGCTGCCTTGCG+AGG | 0.571839 | 2.1:+70585616 | None:intergenic |
| TTAACAATTGAAGTCAAACC+AGG | 0.573245 | 2.1:-70584773 | MS.gene002499:CDS |
| ATGATCAATATGGAGAAGAA+GGG | 0.585118 | 2.1:-70585915 | MS.gene002499:CDS |
| TATTCATCCAAGCTATGAAG+AGG | 0.585414 | 2.1:-70584519 | MS.gene002499:CDS |
| CGGGTATTCAAGCCCGTTTG+GGG | 0.586346 | 2.1:-70585767 | MS.gene002499:CDS |
| ACCTCAAGATGCTTCTGGCG+GGG | 0.588669 | 2.1:-70585872 | MS.gene002499:CDS |
| GGGAAATTGCAGATGCAAGT+GGG | 0.597387 | 2.1:-70585528 | MS.gene002499:intron |
| AGGGAAATTGCAGATGCAAG+TGG | 0.598468 | 2.1:-70585529 | MS.gene002499:CDS |
| TTAATATCAAGTTTCCAGCA+AGG | 0.601452 | 2.1:-70584430 | MS.gene002499:CDS |
| GGTGGAGCCAGATCCTTTGG+TGG | 0.611596 | 2.1:-70585706 | MS.gene002499:CDS |
| AGAAACTTCTGGCACCGTAG+TGG | 0.613726 | 2.1:-70584379 | None:intergenic |
| GTTCGTCTCACAACACTGGA+TGG | 0.619421 | 2.1:-70584572 | MS.gene002499:CDS |
| CTATGAAGAGGTTATTCCAA+AGG | 0.619874 | 2.1:-70584507 | MS.gene002499:CDS |
| GGTGGGAATGGAATGAGAGG+TGG | 0.620935 | 2.1:-70585724 | MS.gene002499:CDS |
| GCTAGGCCTATGCGTCAGCA+AGG | 0.621159 | 2.1:-70585640 | MS.gene002499:CDS |
| ACCACCAAACATTCCACCAA+AGG | 0.627179 | 2.1:+70585693 | None:intergenic |
| TCTCACAACACTGGATGGCA+GGG | 0.628562 | 2.1:-70584567 | MS.gene002499:CDS |
| GAAGAGGTTATTCCAAAGGA+AGG | 0.631458 | 2.1:-70584503 | MS.gene002499:CDS |
| CCGCCAGAAGCATCTTGAGG+TGG | 0.632302 | 2.1:+70585874 | None:intergenic |
| CAGGAAAACTATGCCAGTGG+AGG | 0.633181 | 2.1:-70584801 | MS.gene002499:CDS |
| TTGCAGGAAAACTATGCCAG+TGG | 0.635655 | 2.1:-70584804 | MS.gene002499:intron |
| GCCCCGCCAGAAGCATCTTG+AGG | 0.639522 | 2.1:+70585871 | None:intergenic |
| GCGTCAGCAAGGTCCTCGCA+AGG | 0.646053 | 2.1:-70585629 | MS.gene002499:CDS |
| GGGTATTCAAGCCCGTTTGG+GGG | 0.650237 | 2.1:-70585766 | MS.gene002499:CDS |
| GGGGCTACATTCTTCCAAAG+TGG | 0.666162 | 2.1:-70585853 | MS.gene002499:CDS |
| CTCAAATAAGAAAGACGCTG+AGG | 0.667226 | 2.1:-70586124 | MS.gene002499:CDS |
| TCTCTTGTAAATACACCATG+TGG | 0.682973 | 2.1:+70584656 | None:intergenic |
| TAACAATTGAAGTCAAACCA+GGG | 0.689215 | 2.1:-70584772 | MS.gene002499:CDS |
| CAATTGAAGTCAAACCAGGG+TGG | 0.720314 | 2.1:-70584769 | MS.gene002499:CDS |
| GTTATTGATGAGAAACCACA+TGG | 0.724666 | 2.1:-70584671 | MS.gene002499:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCTAAATTATTTTAAAAAAC+AGG | + | chr2.1:70585270-70585289 | None:intergenic | 10.0% |
| !! | TAGAAATTCTGAATATTAAT+TGG | - | chr2.1:70584628-70584647 | MS.gene002499:CDS | 15.0% |
| !! | AAAGCAATTTATGATCAATA+TGG | - | chr2.1:70584691-70584710 | MS.gene002499:CDS | 20.0% |
| !! | ATCTATTTGTTTAAACAAGA+TGG | + | chr2.1:70585348-70585367 | None:intergenic | 20.0% |
| !! | TTCATGACTCATAAATAAAA+TGG | - | chr2.1:70585152-70585171 | MS.gene002499:intron | 20.0% |
| !!! | TTCTGAATATTAATTGGTTT+TGG | - | chr2.1:70584634-70584653 | MS.gene002499:CDS | 20.0% |
| ! | AAAAGTTGAACAGTTCAATT+TGG | - | chr2.1:70585605-70585624 | MS.gene002499:CDS | 25.0% |
| ! | ACAACTTGCAATTTAAAAAC+TGG | + | chr2.1:70585709-70585728 | None:intergenic | 25.0% |
| ! | ATAACAAATATAAGATCTGC+TGG | + | chr2.1:70585930-70585949 | None:intergenic | 25.0% |
| ! | ATGAATAATTCAGCCAAAAT+TGG | + | chr2.1:70585788-70585807 | None:intergenic | 25.0% |
| ! | CAAAAAGATGAAGATTTCAA+GGG | - | chr2.1:70585068-70585087 | MS.gene002499:intron | 25.0% |
| ! | GGATGAATAACATTGTTTAT+AGG | + | chr2.1:70586086-70586105 | None:intergenic | 25.0% |
| ! | TGATATTTAAACCAATGACA+CGG | + | chr2.1:70585581-70585600 | None:intergenic | 25.0% |
| ! | TTCAGATATCTCTTTGAATT+TGG | + | chr2.1:70584518-70584537 | None:intergenic | 25.0% |
| !! | TCTTCTTTTACTAGTTGTTA+GGG | - | chr2.1:70584571-70584590 | MS.gene002499:CDS | 25.0% |
| !! | TTCTTCTTTTACTAGTTGTT+AGG | - | chr2.1:70584570-70584589 | MS.gene002499:CDS | 25.0% |
| !!! | AAATTGCAAGTTGTTTTTGT+GGG | - | chr2.1:70585715-70585734 | MS.gene002499:CDS | 25.0% |
| !!! | TAAATTGCAAGTTGTTTTTG+TGG | - | chr2.1:70585714-70585733 | MS.gene002499:CDS | 25.0% |
| ATCAAGATAGACATACAGAT+AGG | - | chr2.1:70585232-70585251 | MS.gene002499:intron | 30.0% | |
| ATCGACACTTATGATCAAAA+AGG | + | chr2.1:70584602-70584621 | None:intergenic | 30.0% | |
| ATGATCAATATGGAGAAGAA+GGG | - | chr2.1:70584701-70584720 | MS.gene002499:CDS | 30.0% | |
| ATTGAAGTTAAGTCATCCTA+TGG | + | chr2.1:70585394-70585413 | None:intergenic | 30.0% | |
| CCAAAAAGATGAAGATTTCA+AGG | - | chr2.1:70585067-70585086 | MS.gene002499:intron | 30.0% | |
| TAACAATTGAAGTCAAACCA+GGG | - | chr2.1:70585844-70585863 | MS.gene002499:CDS | 30.0% | |
| TATGATCAATATGGAGAAGA+AGG | - | chr2.1:70584700-70584719 | MS.gene002499:CDS | 30.0% | |
| TATTTGAGGGATTCTTATCA+GGG | + | chr2.1:70584480-70584499 | None:intergenic | 30.0% | |
| TCATAAATTGCTTTCTTCTG+TGG | + | chr2.1:70584685-70584704 | None:intergenic | 30.0% | |
| TGAATTATTCATCTCTTTGC+AGG | - | chr2.1:70585796-70585815 | MS.gene002499:CDS | 30.0% | |
| TTAACAATTGAAGTCAAACC+AGG | - | chr2.1:70585843-70585862 | MS.gene002499:CDS | 30.0% | |
| TTAATATCAAGTTTCCAGCA+AGG | - | chr2.1:70586186-70586205 | MS.gene002499:CDS | 30.0% | |
| TTACTTCATTTGATGAAGCT+AGG | - | chr2.1:70584959-70584978 | MS.gene002499:intron | 30.0% | |
| TTATTTGAGGGATTCTTATC+AGG | + | chr2.1:70584481-70584500 | None:intergenic | 30.0% | |
| ! | AGACTACTACAAGATTTTGA+AGG | - | chr2.1:70584390-70584409 | MS.gene002499:CDS | 30.0% |
| ! | ATATCTTTGCAGAGTTTTTC+GGG | - | chr2.1:70584830-70584849 | MS.gene002499:intron | 30.0% |
| ! | CCTTGAAATCTTCATCTTTT+TGG | + | chr2.1:70585070-70585089 | None:intergenic | 30.0% |
| ! | GATATCTTTGCAGAGTTTTT+CGG | - | chr2.1:70584829-70584848 | MS.gene002499:intron | 30.0% |
| ! | TGAGTCATAAGTTCCAATTT+TGG | - | chr2.1:70585772-70585791 | MS.gene002499:CDS | 30.0% |
| !! | GTGTCATTGGTTTAAATATC+AGG | - | chr2.1:70585580-70585599 | MS.gene002499:CDS | 30.0% |
| !!! | AATTGCAAGTTGTTTTTGTG+GGG | - | chr2.1:70585716-70585735 | MS.gene002499:CDS | 30.0% |
| !!! | TGGTTTTGGTTTTATGATGA+AGG | - | chr2.1:70584648-70584667 | MS.gene002499:CDS | 30.0% |
| !!! | TTTGAAGGATCTTTTGGAAT+AGG | + | chr2.1:70586143-70586162 | None:intergenic | 30.0% |
| AAAATCACATTCCCTGAGAA+AGG | - | chr2.1:70585882-70585901 | MS.gene002499:CDS | 35.0% | |
| AAACCGTAATGTTACCTCAT+AGG | + | chr2.1:70584542-70584561 | None:intergenic | 35.0% | |
| AAGATATCGTTTGCGTTTCT+TGG | + | chr2.1:70584817-70584836 | None:intergenic | 35.0% | |
| AAGCCTATGAGGTAACATTA+CGG | - | chr2.1:70584536-70584555 | MS.gene002499:CDS | 35.0% | |
| AGTTGGAATCAAGAAACTTC+TGG | - | chr2.1:70586226-70586245 | MS.gene002499:CDS | 35.0% | |
| ATTGTTAAGATTTCCTCCAC+TGG | + | chr2.1:70585831-70585850 | None:intergenic | 35.0% | |
| CATGGTGTATTTACAAGAGA+TGG | - | chr2.1:70585963-70585982 | MS.gene002499:intron | 35.0% | |
| CCAAAAGATCCTTCAAAGAA+GGG | - | chr2.1:70586146-70586165 | MS.gene002499:CDS | 35.0% | |
| CTAAGATTACCCTTCTTTGA+AGG | + | chr2.1:70586158-70586177 | None:intergenic | 35.0% | |
| CTATGAAGAGGTTATTCCAA+AGG | - | chr2.1:70586109-70586128 | MS.gene002499:CDS | 35.0% | |
| CTTCAAAGAAGGGTAATCTT+AGG | - | chr2.1:70586156-70586175 | MS.gene002499:CDS | 35.0% | |
| GTTATTGATGAGAAACCACA+TGG | - | chr2.1:70585945-70585964 | MS.gene002499:CDS | 35.0% | |
| TACAAGAGATGGCAATGATT+TGG | - | chr2.1:70585974-70585993 | MS.gene002499:intron | 35.0% | |
| TAGATGATGAAGCACAAACA+CGG | - | chr2.1:70585418-70585437 | MS.gene002499:intron | 35.0% | |
| TATTCATCCAAGCTATGAAG+AGG | - | chr2.1:70586097-70586116 | MS.gene002499:CDS | 35.0% | |
| TCCAAAAGATCCTTCAAAGA+AGG | - | chr2.1:70586145-70586164 | MS.gene002499:CDS | 35.0% | |
| TCTCTTGTAAATACACCATG+TGG | + | chr2.1:70585963-70585982 | None:intergenic | 35.0% | |
| TGTCTAGTAATAGAGTCCAT+AGG | - | chr2.1:70585375-70585394 | MS.gene002499:intron | 35.0% | |
| TTTCTTCAACTCTTCTTCTG+TGG | + | chr2.1:70584428-70584447 | None:intergenic | 35.0% | |
| ! | AATTTGGTTCAGTATGGTAG+AGG | - | chr2.1:70585621-70585640 | MS.gene002499:CDS | 35.0% |
| ! | ATTTGGTTCAGTATGGTAGA+GGG | - | chr2.1:70585622-70585641 | MS.gene002499:CDS | 35.0% |
| ! | CAGTTCAATTTGGTTCAGTA+TGG | - | chr2.1:70585615-70585634 | MS.gene002499:CDS | 35.0% |
| ! | TCAGCGTCTTTCTTATTTGA+GGG | + | chr2.1:70584493-70584512 | None:intergenic | 35.0% |
| ! | TTGTGTTCAACACATTGGTT+TGG | - | chr2.1:70585673-70585692 | MS.gene002499:CDS | 35.0% |
| !! | AGGTTTTGTGTTCAACACAT+TGG | - | chr2.1:70585668-70585687 | MS.gene002499:CDS | 35.0% |
| AAACATTCCACCAAAGGATC+TGG | + | chr2.1:70584920-70584939 | None:intergenic | 40.0% | |
| ACATTCTTCCAAAGTGGAGA+TGG | - | chr2.1:70584769-70584788 | MS.gene002499:CDS | 40.0% | |
| AGATCCTTTGGTGGAATGTT+TGG | - | chr2.1:70584919-70584938 | MS.gene002499:intron | 40.0% | |
| AGATCTGCTGGTATCACATT+TGG | + | chr2.1:70585918-70585937 | None:intergenic | 40.0% | |
| AGTCTTGAGGAGCTCTATAA+AGG | - | chr2.1:70585039-70585058 | MS.gene002499:intron | 40.0% | |
| ATCGAAAACTTGCCATGAAG+TGG | - | chr2.1:70584452-70584471 | MS.gene002499:CDS | 40.0% | |
| ATGGAGAAGAAGGGCTTAAA+GGG | - | chr2.1:70584710-70584729 | MS.gene002499:CDS | 40.0% | |
| CACAAACATCAGACATGACA+CGG | - | chr2.1:70585442-70585461 | MS.gene002499:intron | 40.0% | |
| CTCAAATAAGAAAGACGCTG+AGG | - | chr2.1:70584492-70584511 | MS.gene002499:CDS | 40.0% | |
| GAAGAGGTTATTCCAAAGGA+AGG | - | chr2.1:70586113-70586132 | MS.gene002499:CDS | 40.0% | |
| GGAATAACCTCTTCATAGCT+TGG | + | chr2.1:70586107-70586126 | None:intergenic | 40.0% | |
| GGATTGAACCTAAACGTTGT+TGG | + | chr2.1:70584796-70584815 | None:intergenic | 40.0% | |
| GTCTTGAGGAGCTCTATAAA+GGG | - | chr2.1:70585040-70585059 | MS.gene002499:intron | 40.0% | |
| GTTGCTCATTTCCTTTCTCA+GGG | + | chr2.1:70585896-70585915 | None:intergenic | 40.0% | |
| TATGGAGAAGAAGGGCTTAA+AGG | - | chr2.1:70584709-70584728 | MS.gene002499:CDS | 40.0% | |
| TTGAACACAAAACCTACCGA+AGG | + | chr2.1:70585663-70585682 | None:intergenic | 40.0% | |
| TTGACTTCTGAGCAGAAAGT+TGG | - | chr2.1:70586209-70586228 | MS.gene002499:CDS | 40.0% | |
| ! | AGAGATATCTGAAGCCTATG+AGG | - | chr2.1:70584525-70584544 | MS.gene002499:CDS | 40.0% |
| ! | CTCAGCGTCTTTCTTATTTG+AGG | + | chr2.1:70584494-70584513 | None:intergenic | 40.0% |
| ! | TAGATTGCCTTGTAGTCTTG+AGG | - | chr2.1:70585026-70585045 | MS.gene002499:intron | 40.0% |
| ! | TCACTAGCAGAAGCTTTAAC+AGG | - | chr2.1:70586014-70586033 | MS.gene002499:intron | 40.0% |
| !! | CCCTTCTTTGAAGGATCTTT+TGG | + | chr2.1:70586149-70586168 | None:intergenic | 40.0% |
| ACCACCAAACATTCCACCAA+AGG | + | chr2.1:70584926-70584945 | None:intergenic | 45.0% | |
| AGGGAAATTGCAGATGCAAG+TGG | - | chr2.1:70585087-70585106 | MS.gene002499:intron | 45.0% | |
| AGTCAAACCAGGGTGGAAAA+AGG | - | chr2.1:70585854-70585873 | MS.gene002499:CDS | 45.0% | |
| CAATTGAAGTCAAACCAGGG+TGG | - | chr2.1:70585847-70585866 | MS.gene002499:CDS | 45.0% | |
| GAGATGGACCAACAACGTTT+AGG | - | chr2.1:70584785-70584804 | MS.gene002499:CDS | 45.0% | |
| GGAATAGGCATACCTTCCTT+TGG | + | chr2.1:70586128-70586147 | None:intergenic | 45.0% | |
| GGGAAATTGCAGATGCAAGT+GGG | - | chr2.1:70585088-70585107 | MS.gene002499:intron | 45.0% | |
| GGTTGCTCATTTCCTTTCTC+AGG | + | chr2.1:70585897-70585916 | None:intergenic | 45.0% | |
| GTCAAACCAGGGTGGAAAAA+GGG | - | chr2.1:70585855-70585874 | MS.gene002499:CDS | 45.0% | |
| TAGAGCTCCTCAAGACTACA+AGG | + | chr2.1:70585036-70585055 | None:intergenic | 45.0% | |
| TCCTTTGGTGGAATGTTTGG+TGG | - | chr2.1:70584922-70584941 | MS.gene002499:intron | 45.0% | |
| TTGCAGGAAAACTATGCCAG+TGG | - | chr2.1:70585812-70585831 | MS.gene002499:CDS | 45.0% | |
| TTGTTGGTCCATCTCCACTT+TGG | + | chr2.1:70584780-70584799 | None:intergenic | 45.0% | |
| ! | TTTGTTCCCTTTTTCCACCC+TGG | + | chr2.1:70585864-70585883 | None:intergenic | 45.0% |
| AAGACAACGAGTCCTTCGGT+AGG | - | chr2.1:70585648-70585667 | MS.gene002499:CDS | 50.0% | |
| ACACGGACACTCCTAGGATT+AGG | + | chr2.1:70585564-70585583 | None:intergenic | 50.0% | |
| ATTCCTCCCATTCCCCCAAA+CGG | + | chr2.1:70584865-70584884 | None:intergenic | 50.0% | |
| CACTGTTCGTCTCACAACAC+TGG | - | chr2.1:70586040-70586059 | MS.gene002499:intron | 50.0% | |
| CAGGAAAACTATGCCAGTGG+AGG | - | chr2.1:70585815-70585834 | MS.gene002499:CDS | 50.0% | |
| GACCAAGACAACGAGTCCTT+CGG | - | chr2.1:70585644-70585663 | MS.gene002499:CDS | 50.0% | |
| GGGGCTACATTCTTCCAAAG+TGG | - | chr2.1:70584763-70584782 | MS.gene002499:CDS | 50.0% | |
| GTTCGTCTCACAACACTGGA+TGG | - | chr2.1:70586044-70586063 | MS.gene002499:intron | 50.0% | |
| TACCGAAGGACTCGTTGTCT+TGG | + | chr2.1:70585649-70585668 | None:intergenic | 50.0% | |
| TCCTAGGATTAGGTGTGTCG+CGG | + | chr2.1:70585554-70585573 | None:intergenic | 50.0% | |
| TCGGGTATTCAAGCCCGTTT+GGG | - | chr2.1:70584848-70584867 | MS.gene002499:intron | 50.0% | |
| TCTCACAACACTGGATGGCA+GGG | - | chr2.1:70586049-70586068 | MS.gene002499:intron | 50.0% | |
| TGCTCAGAAGTCAACCTTGC+TGG | + | chr2.1:70586203-70586222 | None:intergenic | 50.0% | |
| TTCGGGTATTCAAGCCCGTT+TGG | - | chr2.1:70584847-70584866 | MS.gene002499:intron | 50.0% | |
| TTTGGGGGAATGGGAGGAAT+GGG | - | chr2.1:70584865-70584884 | MS.gene002499:intron | 50.0% | |
| !! | CTTATCAGGGTGCCACTTCA+TGG | + | chr2.1:70584467-70584486 | None:intergenic | 50.0% |
| ACCGCGACACACCTAATCCT+AGG | - | chr2.1:70585550-70585569 | MS.gene002499:CDS | 55.0% | |
| ACCTCAAGATGCTTCTGGCG+GGG | - | chr2.1:70584744-70584763 | MS.gene002499:CDS | 55.0% | |
| AGAGGTGGAGCCAGATCCTT+TGG | - | chr2.1:70584907-70584926 | MS.gene002499:intron | 55.0% | |
| CACCTCAAGATGCTTCTGGC+GGG | - | chr2.1:70584743-70584762 | MS.gene002499:CDS | 55.0% | |
| CCAATGACACGGACACTCCT+AGG | + | chr2.1:70585570-70585589 | None:intergenic | 55.0% | |
| CCACCACCTCAAGATGCTTC+TGG | - | chr2.1:70584739-70584758 | MS.gene002499:CDS | 55.0% | |
| CCACCTCAAGATGCTTCTGG+CGG | - | chr2.1:70584742-70584761 | MS.gene002499:CDS | 55.0% | |
| CGGGTATTCAAGCCCGTTTG+GGG | - | chr2.1:70584849-70584868 | MS.gene002499:intron | 55.0% | |
| GATTAGGTGTGTCGCGGTGT+CGG | + | chr2.1:70585548-70585567 | None:intergenic | 55.0% | |
| GCTGGTGGGAATGGAATGAG+AGG | - | chr2.1:70584889-70584908 | MS.gene002499:intron | 55.0% | |
| GGGTATTCAAGCCCGTTTGG+GGG | - | chr2.1:70584850-70584869 | MS.gene002499:intron | 55.0% | |
| GGTGGGAATGGAATGAGAGG+TGG | - | chr2.1:70584892-70584911 | MS.gene002499:intron | 55.0% | |
| GTCTCACAACACTGGATGGC+AGG | - | chr2.1:70586048-70586067 | MS.gene002499:intron | 55.0% | |
| GTTTGGGGGAATGGGAGGAA+TGG | - | chr2.1:70584864-70584883 | MS.gene002499:intron | 55.0% | |
| TCAAGCCCGTTTGGGGGAAT+GGG | - | chr2.1:70584856-70584875 | MS.gene002499:intron | 55.0% | |
| TCAATAGCAGCTGCCTTGCG+AGG | + | chr2.1:70585003-70585022 | None:intergenic | 55.0% | |
| TTCAAGCCCGTTTGGGGGAA+TGG | - | chr2.1:70584855-70584874 | MS.gene002499:intron | 55.0% | |
| TTCCTCCCATTCCCCCAAAC+GGG | + | chr2.1:70584864-70584883 | None:intergenic | 55.0% | |
| TTGGGGGAATGGGAGGAATG+GGG | - | chr2.1:70584866-70584885 | MS.gene002499:intron | 55.0% | |
| !! | CCAGAAGCATCTTGAGGTGG+TGG | + | chr2.1:70584742-70584761 | None:intergenic | 55.0% |
| !! | CCTAGGAGTGTCCGTGTCAT+TGG | - | chr2.1:70585567-70585586 | MS.gene002499:CDS | 55.0% |
| CGAGGACCTTGCTGACGCAT+AGG | + | chr2.1:70584985-70585004 | None:intergenic | 60.0% | |
| GCTAGGCCTATGCGTCAGCA+AGG | - | chr2.1:70584976-70584995 | MS.gene002499:intron | 60.0% | |
| GGTGGAGCCAGATCCTTTGG+TGG | - | chr2.1:70584910-70584929 | MS.gene002499:intron | 60.0% | |
| TGGGGGAATGGGAGGAATGG+GGG | - | chr2.1:70584867-70584886 | MS.gene002499:intron | 60.0% | |
| !! | CCGCCAGAAGCATCTTGAGG+TGG | + | chr2.1:70584745-70584764 | None:intergenic | 60.0% |
| AGCCCGTTTGGGGGAATGGG+AGG | - | chr2.1:70584859-70584878 | MS.gene002499:intron | 65.0% | |
| ATGGGAGGAATGGGGGCTGG+TGG | - | chr2.1:70584874-70584893 | MS.gene002499:intron | 65.0% | |
| GCGTCAGCAAGGTCCTCGCA+AGG | - | chr2.1:70584987-70585006 | MS.gene002499:intron | 65.0% | |
| GGAATGGGAGGAATGGGGGC+TGG | - | chr2.1:70584871-70584890 | MS.gene002499:intron | 65.0% | |
| ! | GGAATGGGGGCTGGTGGGAA+TGG | - | chr2.1:70584880-70584899 | MS.gene002499:intron | 65.0% |
| ! | TGGGAGGAATGGGGGCTGGT+GGG | - | chr2.1:70584875-70584894 | MS.gene002499:intron | 65.0% |
| !! | GCCCCGCCAGAAGCATCTTG+AGG | + | chr2.1:70584748-70584767 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 70584382 | 70586256 | 70584382 | ID=MS.gene002499 |
| chr2.1 | mRNA | 70584382 | 70586256 | 70584382 | ID=MS.gene002499.t1;Parent=MS.gene002499 |
| chr2.1 | exon | 70586092 | 70586256 | 70586092 | ID=MS.gene002499.t1.exon1;Parent=MS.gene002499.t1 |
| chr2.1 | CDS | 70586092 | 70586256 | 70586092 | ID=cds.MS.gene002499.t1;Parent=MS.gene002499.t1 |
| chr2.1 | exon | 70585529 | 70585968 | 70585529 | ID=MS.gene002499.t1.exon2;Parent=MS.gene002499.t1 |
| chr2.1 | CDS | 70585529 | 70585968 | 70585529 | ID=cds.MS.gene002499.t1;Parent=MS.gene002499.t1 |
| chr2.1 | exon | 70584382 | 70584820 | 70584382 | ID=MS.gene002499.t1.exon3;Parent=MS.gene002499.t1 |
| chr2.1 | CDS | 70584382 | 70584820 | 70584382 | ID=cds.MS.gene002499.t1;Parent=MS.gene002499.t1 |
| Gene Sequence |
| Protein sequence |
