Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50004.t1 | XP_013454832.1 | 99.4 | 341 | 2 | 0 | 1 | 341 | 1 | 341 | 1.80E-191 | 678.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50004.t1 | Q5R8J8 | 45.6 | 355 | 161 | 10 | 1 | 341 | 1 | 337 | 8.0e-71 | 268.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50004.t1 | G8A2L9 | 99.4 | 341 | 2 | 0 | 1 | 341 | 1 | 341 | 1.3e-191 | 678.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene50004 | 0.845835 | 3.17E-59 | -1.69E-46 |
| MS.gene049208 | MS.gene50004 | 0.805706 | 1.17E-49 | -1.69E-46 |
| MS.gene049350 | MS.gene50004 | 0.873032 | 2.01E-67 | -1.69E-46 |
| MS.gene049368 | MS.gene50004 | 0.80699 | 6.29E-50 | -1.69E-46 |
| MS.gene049411 | MS.gene50004 | 0.804143 | 2.49E-49 | -1.69E-46 |
| MS.gene049711 | MS.gene50004 | 0.838598 | 2.61E-57 | -1.69E-46 |
| MS.gene049807 | MS.gene50004 | 0.869717 | 2.51E-66 | -1.69E-46 |
| MS.gene049824 | MS.gene50004 | 0.801363 | 9.33E-49 | -1.69E-46 |
| MS.gene049887 | MS.gene50004 | 0.829268 | 5.66E-55 | -1.69E-46 |
| MS.gene050437 | MS.gene50004 | 0.815573 | 8.63E-52 | -1.69E-46 |
| MS.gene050689 | MS.gene50004 | 0.827117 | 1.87E-54 | -1.69E-46 |
| MS.gene050752 | MS.gene50004 | 0.854919 | 8.93E-62 | -1.69E-46 |
| MS.gene050838 | MS.gene50004 | 0.849723 | 2.69E-60 | -1.69E-46 |
| MS.gene050901 | MS.gene50004 | 0.819542 | 1.10E-52 | -1.69E-46 |
| MS.gene050945 | MS.gene50004 | 0.821491 | 3.93E-53 | -1.69E-46 |
| MS.gene050955 | MS.gene50004 | 0.830548 | 2.76E-55 | -1.69E-46 |
| MS.gene051003 | MS.gene50004 | 0.820977 | 5.16E-53 | -1.69E-46 |
| MS.gene051102 | MS.gene50004 | 0.803573 | 3.27E-49 | -1.69E-46 |
| MS.gene051234 | MS.gene50004 | 0.867833 | 1.02E-65 | -1.69E-46 |
| MS.gene051343 | MS.gene50004 | 0.852524 | 4.36E-61 | -1.69E-46 |
| MS.gene051450 | MS.gene50004 | 0.804918 | 1.72E-49 | -1.69E-46 |
| MS.gene051642 | MS.gene50004 | 0.80485 | 1.77E-49 | -1.69E-46 |
| MS.gene051676 | MS.gene50004 | 0.811309 | 7.47E-51 | -1.69E-46 |
| MS.gene051700 | MS.gene50004 | 0.814696 | 1.35E-51 | -1.69E-46 |
| MS.gene051744 | MS.gene50004 | 0.818309 | 2.10E-52 | -1.69E-46 |
| MS.gene051885 | MS.gene50004 | 0.820199 | 7.78E-53 | -1.69E-46 |
| MS.gene051902 | MS.gene50004 | 0.812432 | 4.25E-51 | -1.69E-46 |
| MS.gene051975 | MS.gene50004 | 0.841807 | 3.80E-58 | -1.69E-46 |
| MS.gene052072 | MS.gene50004 | 0.830794 | 2.40E-55 | -1.69E-46 |
| MS.gene052133 | MS.gene50004 | 0.812932 | 3.31E-51 | -1.69E-46 |
| MS.gene052307 | MS.gene50004 | 0.860004 | 2.79E-63 | -1.69E-46 |
| MS.gene052335 | MS.gene50004 | 0.830648 | 2.61E-55 | -1.69E-46 |
| MS.gene052516 | MS.gene50004 | 0.814546 | 1.46E-51 | -1.69E-46 |
| MS.gene052533 | MS.gene50004 | 0.829102 | 6.21E-55 | -1.69E-46 |
| MS.gene052609 | MS.gene50004 | 0.848413 | 6.23E-60 | -1.69E-46 |
| MS.gene052793 | MS.gene50004 | 0.800337 | 1.51E-48 | -1.69E-46 |
| MS.gene052932 | MS.gene50004 | 0.801837 | 7.46E-49 | -1.69E-46 |
| MS.gene052947 | MS.gene50004 | 0.838582 | 2.64E-57 | -1.69E-46 |
| MS.gene053122 | MS.gene50004 | 0.835907 | 1.28E-56 | -1.69E-46 |
| MS.gene053143 | MS.gene50004 | 0.853616 | 2.12E-61 | -1.69E-46 |
| MS.gene053144 | MS.gene50004 | 0.834117 | 3.61E-56 | -1.69E-46 |
| MS.gene053226 | MS.gene50004 | 0.831239 | 1.87E-55 | -1.69E-46 |
| MS.gene053581 | MS.gene50004 | 0.851238 | 1.01E-60 | -1.69E-46 |
| MS.gene053599 | MS.gene50004 | 0.813032 | 3.14E-51 | -1.69E-46 |
| MS.gene05364 | MS.gene50004 | 0.842265 | 2.87E-58 | -1.69E-46 |
| MS.gene054403 | MS.gene50004 | 0.855379 | 6.56E-62 | -1.69E-46 |
| MS.gene054584 | MS.gene50004 | 0.812085 | 5.06E-51 | -1.69E-46 |
| MS.gene054709 | MS.gene50004 | 0.830229 | 3.30E-55 | -1.69E-46 |
| MS.gene054824 | MS.gene50004 | 0.813769 | 2.16E-51 | -1.69E-46 |
| MS.gene055313 | MS.gene50004 | 0.831171 | 1.94E-55 | -1.69E-46 |
| MS.gene055314 | MS.gene50004 | 0.80023 | 1.59E-48 | -1.69E-46 |
| MS.gene055374 | MS.gene50004 | 0.803619 | 3.20E-49 | -1.69E-46 |
| MS.gene055465 | MS.gene50004 | 0.811371 | 7.24E-51 | -1.69E-46 |
| MS.gene055466 | MS.gene50004 | 0.8032 | 3.90E-49 | -1.69E-46 |
| MS.gene055468 | MS.gene50004 | 0.809809 | 1.58E-50 | -1.69E-46 |
| MS.gene055512 | MS.gene50004 | 0.806386 | 8.44E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene50004 | 0.844495 | 7.30E-59 | -1.69E-46 |
| MS.gene055537 | MS.gene50004 | 0.806016 | 1.01E-49 | -1.69E-46 |
| MS.gene055555 | MS.gene50004 | 0.809434 | 1.90E-50 | -1.69E-46 |
| MS.gene055580 | MS.gene50004 | -0.812908 | 3.35E-51 | -1.69E-46 |
| MS.gene056005 | MS.gene50004 | 0.853552 | 2.22E-61 | -1.69E-46 |
| MS.gene056043 | MS.gene50004 | -0.80957 | 1.77E-50 | -1.69E-46 |
| MS.gene056075 | MS.gene50004 | 0.824416 | 8.17E-54 | -1.69E-46 |
| MS.gene056308 | MS.gene50004 | 0.831047 | 2.08E-55 | -1.69E-46 |
| MS.gene056578 | MS.gene50004 | 0.814487 | 1.50E-51 | -1.69E-46 |
| MS.gene056699 | MS.gene50004 | 0.822026 | 2.95E-53 | -1.69E-46 |
| MS.gene056986 | MS.gene50004 | 0.818919 | 1.52E-52 | -1.69E-46 |
| MS.gene057034 | MS.gene50004 | 0.810022 | 1.42E-50 | -1.69E-46 |
| MS.gene057102 | MS.gene50004 | 0.869022 | 4.23E-66 | -1.69E-46 |
| MS.gene057705 | MS.gene50004 | 0.831974 | 1.23E-55 | -1.69E-46 |
| MS.gene058149 | MS.gene50004 | 0.826946 | 2.05E-54 | -1.69E-46 |
| MS.gene058492 | MS.gene50004 | 0.810768 | 9.78E-51 | -1.69E-46 |
| MS.gene058668 | MS.gene50004 | 0.819967 | 8.79E-53 | -1.69E-46 |
| MS.gene058852 | MS.gene50004 | 0.85095 | 1.22E-60 | -1.69E-46 |
| MS.gene059146 | MS.gene50004 | 0.807963 | 3.91E-50 | -1.69E-46 |
| MS.gene059171 | MS.gene50004 | 0.825866 | 3.71E-54 | -1.69E-46 |
| MS.gene059227 | MS.gene50004 | 0.87088 | 1.04E-66 | -1.69E-46 |
| MS.gene05978 | MS.gene50004 | 0.812345 | 4.44E-51 | -1.69E-46 |
| MS.gene05985 | MS.gene50004 | -0.829793 | 4.22E-55 | -1.69E-46 |
| MS.gene059965 | MS.gene50004 | 0.829379 | 5.32E-55 | -1.69E-46 |
| MS.gene06001 | MS.gene50004 | 0.80827 | 3.36E-50 | -1.69E-46 |
| MS.gene060365 | MS.gene50004 | 0.815907 | 7.27E-52 | -1.69E-46 |
| MS.gene060519 | MS.gene50004 | 0.800626 | 1.32E-48 | -1.69E-46 |
| MS.gene060937 | MS.gene50004 | 0.802898 | 4.51E-49 | -1.69E-46 |
| MS.gene061006 | MS.gene50004 | 0.806049 | 9.93E-50 | -1.69E-46 |
| MS.gene061100 | MS.gene50004 | 0.835735 | 1.41E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene030057 | MS.gene50004 | PPI |
| MS.gene062351 | MS.gene50004 | PPI |
| MS.gene50004 | MS.gene037465 | PPI |
| MS.gene75767 | MS.gene50004 | PPI |
| MS.gene50004 | MS.gene07262 | PPI |
| MS.gene50013 | MS.gene50004 | PPI |
| MS.gene014782 | MS.gene50004 | PPI |
| MS.gene047354 | MS.gene50004 | PPI |
| MS.gene50004 | MS.gene20834 | PPI |
| MS.gene072961 | MS.gene50004 | PPI |
| MS.gene017129 | MS.gene50004 | PPI |
| MS.gene038363 | MS.gene50004 | PPI |
| MS.gene01038 | MS.gene50004 | PPI |
| MS.gene002499 | MS.gene50004 | PPI |
| MS.gene031675 | MS.gene50004 | PPI |
| MS.gene006630 | MS.gene50004 | PPI |
| MS.gene01472 | MS.gene50004 | PPI |
| MS.gene20783 | MS.gene50004 | PPI |
| MS.gene045555 | MS.gene50004 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50004.t1 | MTR_4g015840 | 99.413 | 341 | 2 | 0 | 1 | 341 | 1 | 341 | 0.0 | 692 |
| MS.gene50004.t1 | MTR_4g015840 | 99.621 | 264 | 1 | 0 | 78 | 341 | 1 | 264 | 0.0 | 533 |
| MS.gene50004.t1 | MTR_2g014470 | 70.640 | 344 | 91 | 4 | 1 | 339 | 1 | 339 | 1.28e-170 | 478 |
| MS.gene50004.t1 | MTR_4g078850 | 67.236 | 351 | 100 | 4 | 1 | 341 | 1 | 346 | 1.00e-169 | 476 |
| MS.gene50004.t1 | MTR_2g090705 | 63.143 | 350 | 103 | 5 | 1 | 339 | 1 | 335 | 1.89e-153 | 434 |
| MS.gene50004.t1 | MTR_2g014480 | 60.290 | 345 | 118 | 6 | 1 | 332 | 1 | 339 | 1.13e-135 | 389 |
| MS.gene50004.t1 | MTR_3g108020 | 58.235 | 340 | 125 | 5 | 1 | 338 | 1 | 325 | 1.27e-128 | 371 |
| MS.gene50004.t1 | MTR_5g037880 | 56.571 | 175 | 76 | 0 | 165 | 339 | 101 | 275 | 6.80e-68 | 214 |
| MS.gene50004.t1 | MTR_5g037880 | 54.667 | 75 | 27 | 1 | 4 | 71 | 5 | 79 | 1.97e-19 | 87.0 |
| MS.gene50004.t1 | MTR_7g109340 | 37.318 | 343 | 180 | 8 | 5 | 338 | 27 | 343 | 1.04e-54 | 182 |
| MS.gene50004.t1 | MTR_3g437840 | 47.205 | 161 | 85 | 0 | 179 | 339 | 2 | 162 | 7.28e-51 | 167 |
| MS.gene50004.t1 | MTR_3g437360 | 49.123 | 171 | 81 | 3 | 148 | 316 | 165 | 331 | 1.36e-47 | 164 |
| MS.gene50004.t1 | MTR_3g437360 | 49.367 | 79 | 40 | 0 | 3 | 81 | 4 | 82 | 8.63e-19 | 86.3 |
| MS.gene50004.t1 | MTR_2g006890 | 44.624 | 186 | 102 | 1 | 154 | 338 | 190 | 375 | 2.96e-46 | 161 |
| MS.gene50004.t1 | MTR_3g088140 | 43.407 | 182 | 102 | 1 | 161 | 341 | 175 | 356 | 3.28e-45 | 158 |
| MS.gene50004.t1 | MTR_8g006430 | 29.208 | 404 | 160 | 12 | 5 | 338 | 15 | 362 | 3.10e-36 | 135 |
| MS.gene50004.t1 | MTR_3g437850 | 36.816 | 201 | 85 | 4 | 3 | 195 | 1 | 167 | 5.11e-36 | 128 |
| MS.gene50004.t1 | MTR_3g087030 | 28.689 | 366 | 209 | 13 | 3 | 337 | 81 | 425 | 1.23e-31 | 123 |
| MS.gene50004.t1 | MTR_5g065160 | 29.480 | 346 | 216 | 12 | 4 | 332 | 83 | 417 | 1.01e-26 | 110 |
| MS.gene50004.t1 | MTR_5g065160 | 29.480 | 346 | 216 | 12 | 4 | 332 | 82 | 416 | 1.05e-26 | 110 |
| MS.gene50004.t1 | MTR_5g065160 | 29.480 | 346 | 216 | 12 | 4 | 332 | 83 | 417 | 1.64e-26 | 109 |
| MS.gene50004.t1 | MTR_5g065160 | 29.480 | 346 | 216 | 12 | 4 | 332 | 76 | 410 | 1.69e-26 | 109 |
| MS.gene50004.t1 | MTR_2g087660 | 36.232 | 138 | 86 | 1 | 203 | 338 | 221 | 358 | 1.66e-24 | 103 |
| MS.gene50004.t1 | MTR_2g087660 | 56.338 | 71 | 26 | 1 | 5 | 75 | 14 | 79 | 3.15e-12 | 67.4 |
| MS.gene50004.t1 | MTR_4g050420 | 35.507 | 138 | 87 | 1 | 203 | 338 | 219 | 356 | 1.36e-23 | 100 |
| MS.gene50004.t1 | MTR_4g050420 | 52.113 | 71 | 29 | 1 | 5 | 75 | 14 | 79 | 9.64e-11 | 62.8 |
| MS.gene50004.t1 | MTR_3g027580 | 30.028 | 353 | 211 | 11 | 4 | 337 | 89 | 424 | 2.83e-23 | 100 |
| MS.gene50004.t1 | MTR_4g023470 | 26.149 | 348 | 220 | 11 | 5 | 331 | 87 | 418 | 7.68e-20 | 90.5 |
| MS.gene50004.t1 | MTR_7g101070 | 55.385 | 65 | 29 | 0 | 4 | 68 | 358 | 422 | 3.82e-19 | 88.6 |
| MS.gene50004.t1 | MTR_2g104030 | 41.803 | 122 | 51 | 4 | 4 | 125 | 70 | 171 | 8.22e-19 | 87.4 |
| MS.gene50004.t1 | MTR_7g112360 | 54.545 | 66 | 27 | 1 | 5 | 67 | 17 | 82 | 6.19e-17 | 77.4 |
| MS.gene50004.t1 | MTR_6g471050 | 25.501 | 349 | 199 | 11 | 30 | 339 | 7 | 333 | 7.74e-17 | 81.6 |
| MS.gene50004.t1 | MTR_7g112360 | 54.545 | 66 | 27 | 1 | 5 | 67 | 17 | 82 | 8.62e-17 | 75.9 |
| MS.gene50004.t1 | MTR_5g012530 | 47.297 | 74 | 37 | 1 | 4 | 75 | 12 | 85 | 1.31e-15 | 78.2 |
| MS.gene50004.t1 | MTR_1g110310 | 49.296 | 71 | 35 | 1 | 4 | 74 | 16 | 85 | 2.97e-15 | 76.6 |
| MS.gene50004.t1 | MTR_5g065860 | 51.562 | 64 | 30 | 1 | 4 | 67 | 48 | 110 | 4.85e-15 | 72.0 |
| MS.gene50004.t1 | MTR_7g069480 | 50.000 | 70 | 33 | 1 | 3 | 72 | 26 | 93 | 7.71e-15 | 75.9 |
| MS.gene50004.t1 | MTR_8g022310 | 46.377 | 69 | 32 | 1 | 4 | 67 | 10 | 78 | 1.79e-14 | 72.0 |
| MS.gene50004.t1 | MTR_5g035770 | 49.315 | 73 | 36 | 1 | 4 | 76 | 25 | 96 | 3.00e-14 | 73.6 |
| MS.gene50004.t1 | MTR_8g022310 | 46.377 | 69 | 32 | 1 | 4 | 67 | 10 | 78 | 3.03e-14 | 70.9 |
| MS.gene50004.t1 | MTR_8g022310 | 46.377 | 69 | 32 | 1 | 4 | 67 | 10 | 78 | 3.67e-14 | 71.6 |
| MS.gene50004.t1 | MTR_8g022310 | 46.377 | 69 | 32 | 1 | 4 | 67 | 10 | 78 | 3.87e-14 | 70.9 |
| MS.gene50004.t1 | MTR_2g087660 | 37.209 | 86 | 54 | 0 | 201 | 286 | 219 | 304 | 7.49e-14 | 71.6 |
| MS.gene50004.t1 | MTR_2g087660 | 56.338 | 71 | 26 | 1 | 5 | 75 | 14 | 79 | 1.91e-12 | 67.8 |
| MS.gene50004.t1 | MTR_4g085070 | 54.717 | 53 | 21 | 1 | 18 | 67 | 26 | 78 | 1.10e-13 | 68.2 |
| MS.gene50004.t1 | MTR_6g027110 | 41.333 | 75 | 40 | 1 | 3 | 73 | 1 | 75 | 1.20e-13 | 67.8 |
| MS.gene50004.t1 | MTR_3g100330 | 52.239 | 67 | 29 | 2 | 3 | 68 | 68 | 132 | 2.06e-13 | 69.3 |
| MS.gene50004.t1 | MTR_1g029460 | 40.000 | 95 | 47 | 3 | 3 | 88 | 5 | 98 | 3.21e-13 | 70.5 |
| MS.gene50004.t1 | MTR_6g027030 | 42.667 | 75 | 39 | 1 | 3 | 73 | 1 | 75 | 3.87e-13 | 68.2 |
| MS.gene50004.t1 | MTR_1g087580 | 41.964 | 112 | 58 | 4 | 234 | 340 | 76 | 185 | 7.71e-13 | 67.0 |
| MS.gene50004.t1 | MTR_6g026940 | 43.478 | 69 | 35 | 1 | 3 | 67 | 1 | 69 | 1.03e-12 | 66.2 |
| MS.gene50004.t1 | MTR_1g052110 | 46.154 | 65 | 34 | 1 | 6 | 70 | 40 | 103 | 3.22e-12 | 66.6 |
| MS.gene50004.t1 | MTR_7g092380 | 31.707 | 123 | 77 | 3 | 6 | 122 | 24 | 145 | 7.39e-12 | 65.5 |
| MS.gene50004.t1 | MTR_5g004570 | 45.070 | 71 | 38 | 1 | 4 | 74 | 6 | 75 | 1.79e-11 | 63.9 |
| MS.gene50004.t1 | MTR_2g020420 | 53.846 | 65 | 28 | 1 | 3 | 67 | 68 | 130 | 8.31e-11 | 63.9 |
| MS.gene50004.t1 | MTR_2g020420 | 53.846 | 65 | 28 | 1 | 3 | 67 | 68 | 130 | 8.42e-11 | 63.5 |
| MS.gene50004.t1 | MTR_8g037810 | 42.697 | 89 | 48 | 2 | 5 | 91 | 7 | 94 | 9.65e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50004.t1 | AT3G08910 | 77.843 | 343 | 54 | 5 | 1 | 341 | 1 | 323 | 0.0 | 519 |
| MS.gene50004.t1 | AT5G01390 | 75.294 | 340 | 77 | 4 | 1 | 339 | 1 | 334 | 2.69e-180 | 502 |
| MS.gene50004.t1 | AT2G20560 | 71.594 | 345 | 82 | 4 | 1 | 338 | 1 | 336 | 3.42e-174 | 487 |
| MS.gene50004.t1 | AT4G28480 | 67.705 | 353 | 93 | 4 | 1 | 338 | 1 | 347 | 3.44e-163 | 459 |
| MS.gene50004.t1 | AT4G28480 | 61.808 | 343 | 72 | 5 | 1 | 338 | 1 | 289 | 7.50e-137 | 390 |
| MS.gene50004.t1 | AT5G25530 | 58.166 | 349 | 125 | 6 | 1 | 339 | 1 | 338 | 4.09e-136 | 390 |
| MS.gene50004.t1 | AT5G25530 | 56.863 | 357 | 125 | 7 | 1 | 339 | 1 | 346 | 3.00e-133 | 384 |
| MS.gene50004.t1 | AT5G01390 | 60.933 | 343 | 63 | 5 | 1 | 339 | 1 | 276 | 2.75e-132 | 378 |
| MS.gene50004.t1 | AT1G10350 | 55.429 | 350 | 146 | 3 | 1 | 341 | 1 | 349 | 3.30e-128 | 371 |
| MS.gene50004.t1 | AT3G47940 | 52.162 | 370 | 121 | 5 | 1 | 338 | 1 | 346 | 2.80e-125 | 363 |
| MS.gene50004.t1 | AT1G59725 | 54.131 | 351 | 131 | 4 | 1 | 341 | 1 | 331 | 2.02e-123 | 358 |
| MS.gene50004.t1 | AT5G01390 | 53.392 | 339 | 56 | 5 | 1 | 339 | 1 | 237 | 6.52e-106 | 310 |
| MS.gene50004.t1 | AT2G20550 | 55.634 | 284 | 78 | 6 | 100 | 338 | 3 | 283 | 2.17e-96 | 287 |
| MS.gene50004.t1 | AT2G20550 | 55.634 | 284 | 78 | 6 | 100 | 338 | 3 | 283 | 2.17e-96 | 287 |
| MS.gene50004.t1 | AT5G01390 | 70.918 | 196 | 50 | 4 | 1 | 195 | 1 | 190 | 2.02e-84 | 255 |
| MS.gene50004.t1 | AT1G44160 | 43.644 | 236 | 120 | 3 | 111 | 341 | 129 | 356 | 4.90e-53 | 179 |
| MS.gene50004.t1 | AT3G62600 | 37.037 | 351 | 180 | 11 | 2 | 339 | 24 | 346 | 1.37e-51 | 174 |
| MS.gene50004.t1 | AT1G11040 | 39.604 | 202 | 107 | 1 | 146 | 332 | 225 | 426 | 1.92e-44 | 158 |
| MS.gene50004.t1 | AT5G22060 | 30.653 | 398 | 159 | 10 | 5 | 338 | 15 | 359 | 1.84e-36 | 136 |
| MS.gene50004.t1 | AT2G22360 | 29.091 | 385 | 182 | 13 | 3 | 337 | 85 | 428 | 2.07e-35 | 134 |
| MS.gene50004.t1 | AT5G48030 | 28.532 | 361 | 203 | 14 | 4 | 331 | 94 | 432 | 5.80e-26 | 108 |
| MS.gene50004.t1 | AT3G44110 | 35.507 | 138 | 87 | 1 | 203 | 338 | 221 | 358 | 3.53e-23 | 99.8 |
| MS.gene50004.t1 | AT1G80030 | 43.307 | 127 | 46 | 5 | 4 | 130 | 75 | 175 | 8.11e-21 | 93.6 |
| MS.gene50004.t1 | AT1G80030 | 43.307 | 127 | 46 | 5 | 4 | 130 | 75 | 175 | 1.10e-20 | 93.2 |
| MS.gene50004.t1 | AT1G80030 | 43.307 | 127 | 46 | 5 | 4 | 130 | 75 | 175 | 1.10e-20 | 93.2 |
| MS.gene50004.t1 | AT1G80030 | 43.307 | 127 | 46 | 5 | 4 | 130 | 75 | 175 | 1.10e-20 | 93.2 |
| MS.gene50004.t1 | AT3G17830 | 56.000 | 75 | 31 | 1 | 2 | 76 | 61 | 133 | 2.03e-19 | 89.4 |
| MS.gene50004.t1 | AT4G39960 | 50.588 | 85 | 36 | 2 | 4 | 88 | 85 | 163 | 8.73e-19 | 87.4 |
| MS.gene50004.t1 | AT4G39960 | 32.353 | 136 | 88 | 3 | 204 | 337 | 301 | 434 | 2.19e-14 | 74.3 |
| MS.gene50004.t1 | AT4G39960 | 50.588 | 85 | 36 | 2 | 4 | 88 | 85 | 163 | 8.73e-19 | 87.4 |
| MS.gene50004.t1 | AT4G39960 | 32.353 | 136 | 88 | 3 | 204 | 337 | 301 | 434 | 2.19e-14 | 74.3 |
| MS.gene50004.t1 | AT3G44110 | 36.111 | 108 | 67 | 1 | 203 | 308 | 221 | 328 | 1.07e-16 | 80.5 |
| MS.gene50004.t1 | AT5G03160 | 52.308 | 65 | 31 | 0 | 4 | 68 | 370 | 434 | 2.38e-16 | 80.1 |
| MS.gene50004.t1 | AT1G68370 | 52.113 | 71 | 33 | 1 | 4 | 74 | 17 | 86 | 5.54e-16 | 79.0 |
| MS.gene50004.t1 | AT1G56300 | 51.515 | 66 | 29 | 1 | 5 | 67 | 14 | 79 | 9.70e-16 | 73.2 |
| MS.gene50004.t1 | AT1G56300 | 51.515 | 66 | 29 | 1 | 5 | 67 | 14 | 79 | 1.13e-15 | 73.9 |
| MS.gene50004.t1 | AT5G16650 | 51.562 | 64 | 30 | 1 | 4 | 67 | 11 | 73 | 2.00e-15 | 73.6 |
| MS.gene50004.t1 | AT5G16650 | 51.562 | 64 | 30 | 1 | 4 | 67 | 11 | 73 | 2.82e-15 | 72.0 |
| MS.gene50004.t1 | AT1G59980 | 47.826 | 69 | 35 | 1 | 6 | 74 | 25 | 92 | 8.22e-15 | 75.1 |
| MS.gene50004.t1 | AT1G59980 | 47.826 | 69 | 35 | 1 | 6 | 74 | 25 | 92 | 1.62e-14 | 74.3 |
| MS.gene50004.t1 | AT2G41000 | 46.377 | 69 | 33 | 1 | 3 | 67 | 2 | 70 | 2.94e-14 | 71.2 |
| MS.gene50004.t1 | AT3G08970 | 49.333 | 75 | 34 | 2 | 3 | 77 | 26 | 96 | 4.13e-14 | 73.6 |
| MS.gene50004.t1 | AT3G08970 | 49.333 | 75 | 34 | 2 | 3 | 77 | 26 | 96 | 4.13e-14 | 73.6 |
| MS.gene50004.t1 | AT2G35720 | 45.205 | 73 | 38 | 1 | 4 | 74 | 15 | 87 | 5.11e-14 | 73.2 |
| MS.gene50004.t1 | AT2G41000 | 46.377 | 69 | 33 | 1 | 3 | 67 | 2 | 70 | 6.69e-14 | 69.7 |
| MS.gene50004.t1 | AT2G21510 | 46.914 | 81 | 41 | 2 | 4 | 83 | 6 | 85 | 9.63e-14 | 71.6 |
| MS.gene50004.t1 | AT2G21510 | 46.914 | 81 | 41 | 2 | 4 | 83 | 6 | 85 | 9.63e-14 | 71.6 |
| MS.gene50004.t1 | AT2G21510 | 46.914 | 81 | 41 | 2 | 4 | 83 | 6 | 85 | 9.77e-14 | 71.6 |
| MS.gene50004.t1 | AT2G21510 | 46.914 | 81 | 41 | 2 | 4 | 83 | 6 | 85 | 9.77e-14 | 71.6 |
| MS.gene50004.t1 | AT2G21510 | 46.914 | 81 | 41 | 2 | 4 | 83 | 6 | 85 | 1.31e-13 | 71.2 |
| MS.gene50004.t1 | AT1G24120 | 44.595 | 74 | 40 | 1 | 4 | 77 | 20 | 92 | 1.99e-13 | 71.2 |
| MS.gene50004.t1 | AT2G33735 | 46.154 | 65 | 34 | 1 | 4 | 68 | 22 | 85 | 2.71e-13 | 66.2 |
| MS.gene50004.t1 | AT2G33735 | 46.154 | 65 | 34 | 1 | 4 | 68 | 22 | 85 | 2.71e-13 | 66.2 |
| MS.gene50004.t1 | AT5G06910 | 49.231 | 65 | 32 | 1 | 6 | 70 | 31 | 94 | 8.32e-13 | 68.2 |
| MS.gene50004.t1 | AT1G71000 | 43.939 | 66 | 34 | 1 | 5 | 67 | 9 | 74 | 7.69e-12 | 63.5 |
| MS.gene50004.t1 | AT4G39150 | 43.210 | 81 | 44 | 2 | 4 | 83 | 6 | 85 | 1.12e-11 | 65.5 |
| MS.gene50004.t1 | AT4G39150 | 43.210 | 81 | 44 | 2 | 4 | 83 | 6 | 85 | 1.12e-11 | 65.5 |
| MS.gene50004.t1 | AT4G39150 | 43.210 | 81 | 44 | 2 | 4 | 83 | 6 | 85 | 1.12e-11 | 65.5 |
| MS.gene50004.t1 | AT1G71000 | 43.939 | 66 | 34 | 1 | 5 | 67 | 9 | 74 | 1.69e-11 | 62.4 |
| MS.gene50004.t1 | AT4G19570 | 51.515 | 66 | 30 | 1 | 3 | 68 | 65 | 128 | 2.75e-11 | 65.1 |
| MS.gene50004.t1 | AT3G12170 | 46.154 | 65 | 34 | 1 | 6 | 70 | 13 | 76 | 3.28e-11 | 63.5 |
| MS.gene50004.t1 | AT1G21080 | 41.250 | 80 | 46 | 1 | 4 | 83 | 6 | 84 | 3.63e-11 | 64.3 |
| MS.gene50004.t1 | AT1G21080 | 40.741 | 81 | 47 | 1 | 3 | 83 | 5 | 84 | 3.95e-11 | 63.9 |
| MS.gene50004.t1 | AT5G05750 | 37.273 | 110 | 61 | 3 | 4 | 113 | 114 | 215 | 4.63e-11 | 63.2 |
| MS.gene50004.t1 | AT3G12170 | 46.154 | 65 | 34 | 1 | 6 | 70 | 49 | 112 | 5.69e-11 | 63.2 |
Find 95 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAGAGATTTGCTTGAATT+TGG | 0.168588 | 4.3:-82682234 | None:intergenic |
| TCAGCATCTTTCTTGTTATT+AGG | 0.176740 | 4.3:-82682209 | None:intergenic |
| CAGCATCTTTCTTGTTATTA+GGG | 0.208495 | 4.3:-82682208 | None:intergenic |
| TCCCATCGAGGGTAGCTATT+TGG | 0.216321 | 4.3:-82685264 | None:intergenic |
| TCCTAAGGAACCTTCCAAAA+AGG | 0.245405 | 4.3:+82685363 | MS.gene50004:CDS |
| GCTTTCCGAGGGGAATGTTT+AGG | 0.274668 | 4.3:+82683486 | MS.gene50004:CDS |
| CTTTCCGAGGGGAATGTTTA+GGG | 0.283758 | 4.3:+82683487 | MS.gene50004:CDS |
| CCCATCGAGGGTAGCTATTT+GGG | 0.309339 | 4.3:-82685263 | None:intergenic |
| TCATATGAAGAAGTAATTAA+AGG | 0.309573 | 4.3:+82685325 | MS.gene50004:CDS |
| TGCTCTGATGTAAGTCTTGA+TGG | 0.316745 | 4.3:-82685418 | None:intergenic |
| AGTTTGGAGGATTTGTATAA+AGG | 0.321209 | 4.3:+82683602 | MS.gene50004:CDS |
| TGGCGGTGGAATGGGTGATA+TGG | 0.323498 | 4.3:+82683442 | MS.gene50004:CDS |
| CTCTGTTCATTTCCCTTCTC+CGG | 0.330584 | 4.3:-82685112 | None:intergenic |
| AAACAAGGTCTGCAGGTATA+AGG | 0.341570 | 4.3:-82685138 | None:intergenic |
| TTGTTATTAGGGTTCTTATC+AGG | 0.349663 | 4.3:-82682197 | None:intergenic |
| GTTTGGAGGATTTGTATAAA+GGG | 0.350475 | 4.3:+82683603 | MS.gene50004:CDS |
| AGAATTTCCTCAACTGTAGT+AGG | 0.358832 | 4.3:-82685040 | None:intergenic |
| TTTCTCTTCCTTTAGGAATT+CGG | 0.359374 | 4.3:+82683517 | MS.gene50004:CDS |
| TTGGAAGGTTCCTTAGGAAT+TGG | 0.363891 | 4.3:-82685358 | None:intergenic |
| GGTGGTCATCCTGGTGCATC+TGG | 0.369509 | 4.3:+82683464 | MS.gene50004:CDS |
| GAGAACATTGCCTTGCAGTT+TGG | 0.378422 | 4.3:+82683586 | MS.gene50004:CDS |
| TTCGGGTTTCAAAGACCATT+TGG | 0.392906 | 4.3:+82683422 | MS.gene50004:CDS |
| TTAATTACTTCTTCATATGA+TGG | 0.396614 | 4.3:-82685322 | None:intergenic |
| AGACCATTTGGCGGTGGAAT+GGG | 0.427291 | 4.3:+82683434 | MS.gene50004:CDS |
| ATCGCAAACTTGCTATGAAA+TGG | 0.429662 | 4.3:+82682171 | MS.gene50004:CDS |
| GGTGATATGGGTGGTCATCC+TGG | 0.434210 | 4.3:+82683455 | MS.gene50004:CDS |
| GGCGGTGGAATGGGTGATAT+GGG | 0.438794 | 4.3:+82683443 | MS.gene50004:CDS |
| ATGGTGGACCGACAATGTTC+CGG | 0.441258 | 4.3:+82683360 | MS.gene50004:CDS |
| ATCAAGCCAGGTTGGAAGAA+AGG | 0.451023 | 4.3:+82685073 | MS.gene50004:CDS |
| AAGACCATTTGGCGGTGGAA+TGG | 0.454672 | 4.3:+82683433 | MS.gene50004:CDS |
| ATATGGTGAGGAGGGGTTGA+AGG | 0.458111 | 4.3:+82683292 | MS.gene50004:CDS |
| TCGGAAAATCCACCTGCACC+TGG | 0.462806 | 4.3:-82683329 | None:intergenic |
| TTTGTTCCTTTCTTCCAACC+TGG | 0.471768 | 4.3:-82685079 | None:intergenic |
| AATATGTCATCCGCACTTCT+CGG | 0.475047 | 4.3:-82683389 | None:intergenic |
| CCGCACTTCTCGGATTGAAC+CGG | 0.478831 | 4.3:-82683379 | None:intergenic |
| CTAACAATTGAGATCAAGCC+AGG | 0.485097 | 4.3:+82685061 | MS.gene50004:CDS |
| AACATTGCCTTGCAGTTTGG+AGG | 0.487226 | 4.3:+82683589 | MS.gene50004:CDS |
| GGATTGAACCGGAACATTGT+CGG | 0.505215 | 4.3:-82683368 | None:intergenic |
| AGAGCTGTGTATGATCAATA+TGG | 0.509203 | 4.3:+82683275 | MS.gene50004:CDS |
| CAAGGCAATGTTCTCTCTAT+CGG | 0.510097 | 4.3:-82683578 | None:intergenic |
| GCTGGAATCAGTAACATCTC+TGG | 0.511627 | 4.3:-82683648 | None:intergenic |
| CCTCGATGGGAGGAATCTTA+CGG | 0.515468 | 4.3:+82685276 | MS.gene50004:CDS |
| CCCAAATAGCTACCCTCGAT+GGG | 0.515770 | 4.3:+82685263 | MS.gene50004:CDS |
| GGACTAATGATGGTGTTGAC+GGG | 0.516562 | 4.3:-82685301 | None:intergenic |
| TCCCTCTTGAAGACAGTATG+AGG | 0.516733 | 4.3:-82685178 | None:intergenic |
| TGGTGCATCTGGCTTTCCGA+GGG | 0.518716 | 4.3:+82683475 | MS.gene50004:CDS |
| CGGAAAATCCACCTGCACCT+GGG | 0.520170 | 4.3:-82683328 | None:intergenic |
| TTTAGGAATTCGGCCGGTGA+AGG | 0.528483 | 4.3:+82683527 | MS.gene50004:CDS |
| CTGGTGCATCTGGCTTTCCG+AGG | 0.535834 | 4.3:+82683474 | MS.gene50004:CDS |
| GCCCAAATAGCTACCCTCGA+TGG | 0.538402 | 4.3:+82685262 | MS.gene50004:CDS |
| TTCATATGATGGACTAATGA+TGG | 0.538880 | 4.3:-82685311 | None:intergenic |
| TTGCATTTCGATCTATCTGA+AGG | 0.539158 | 4.3:-82682124 | None:intergenic |
| CTCGGAAAGCCAGATGCACC+AGG | 0.544371 | 4.3:-82683473 | None:intergenic |
| CAATTGAGATCAAGCCAGGT+TGG | 0.546154 | 4.3:+82685065 | MS.gene50004:CDS |
| TCACCCATTCCACCGCCAAA+TGG | 0.551823 | 4.3:-82683437 | None:intergenic |
| GGGTTTCAAAGACCATTTGG+CGG | 0.553824 | 4.3:+82683425 | MS.gene50004:CDS |
| TGAAGAAGTAATTAAAGGAG+AGG | 0.557340 | 4.3:+82685330 | MS.gene50004:CDS |
| AGAGGGTATGCCAATTCCTA+AGG | 0.558236 | 4.3:+82685348 | MS.gene50004:CDS |
| TGTCAATAATCGCTTGATGC+CGG | 0.560172 | 4.3:-82685446 | None:intergenic |
| AATTCCTAAAGGAAGAGAAA+AGG | 0.566815 | 4.3:-82683514 | None:intergenic |
| GGAAAATCCACCTGCACCTG+GGG | 0.568173 | 4.3:-82683327 | None:intergenic |
| TTTCAAAGACCATTTGGCGG+TGG | 0.571030 | 4.3:+82683428 | MS.gene50004:CDS |
| TTCACCGGCCGAATTCCTAA+AGG | 0.573122 | 4.3:-82683525 | None:intergenic |
| TATGGTGAGGAGGGGTTGAA+GGG | 0.576990 | 4.3:+82683293 | MS.gene50004:CDS |
| GAAGAAGTAATTAAAGGAGA+GGG | 0.582830 | 4.3:+82685331 | MS.gene50004:CDS |
| CACATTGGCAGATCCTTCAC+CGG | 0.582928 | 4.3:-82683540 | None:intergenic |
| TCTCTTGTAGAAGCTCTGAC+AGG | 0.585328 | 4.3:+82685232 | MS.gene50004:CDS |
| TGGACTAATGATGGTGTTGA+CGG | 0.590380 | 4.3:-82685302 | None:intergenic |
| TATGATCAATATGGTGAGGA+GGG | 0.591969 | 4.3:+82683284 | MS.gene50004:CDS |
| TACAAATCCTCCAAACTGCA+AGG | 0.594020 | 4.3:-82683596 | None:intergenic |
| CTTACATCAGAGCAGAAGAC+CGG | 0.597536 | 4.3:+82685427 | MS.gene50004:CDS |
| CGTAAGATTCCTCCCATCGA+GGG | 0.600569 | 4.3:-82685275 | None:intergenic |
| TCTTCCTTTAGGAATTCGGC+CGG | 0.603452 | 4.3:+82683521 | MS.gene50004:CDS |
| ATGGTGAGGAGGGGTTGAAG+GGG | 0.612762 | 4.3:+82683294 | MS.gene50004:CDS |
| GGTGGAATGGGTGATATGGG+TGG | 0.613503 | 4.3:+82683446 | MS.gene50004:CDS |
| AAGGAAGCCTACTACAGTTG+AGG | 0.616465 | 4.3:+82685033 | MS.gene50004:intron |
| CATACTGTCTTCAAGAGGGA+CGG | 0.632225 | 4.3:+82685181 | MS.gene50004:CDS |
| GCCTCATACTGTCTTCAAGA+GGG | 0.644262 | 4.3:+82685177 | MS.gene50004:CDS |
| AGAGATGTTACTGATTCCAG+CGG | 0.648475 | 4.3:+82683650 | MS.gene50004:CDS |
| TCTTTGAAACCCGAAGAACT+CGG | 0.650196 | 4.3:-82683414 | None:intergenic |
| GAGATGTTACTGATTCCAGC+GGG | 0.654951 | 4.3:+82683651 | MS.gene50004:CDS |
| TCATCCCTAAACATTCCCCT+CGG | 0.655585 | 4.3:-82683491 | None:intergenic |
| AGCCTCATACTGTCTTCAAG+AGG | 0.661585 | 4.3:+82685176 | MS.gene50004:CDS |
| CGGTCCACCATCACCACCGT+CGG | 0.662709 | 4.3:-82683348 | None:intergenic |
| GGTGCATCTGGCTTTCCGAG+GGG | 0.666004 | 4.3:+82683476 | MS.gene50004:CDS |
| AAATAGCTACCCTCGATGGG+AGG | 0.668540 | 4.3:+82685266 | MS.gene50004:CDS |
| CCGGTTCAATCCGAGAAGTG+CGG | 0.669023 | 4.3:+82683379 | MS.gene50004:CDS |
| AAGGATCTGCCAATGTGATG+AGG | 0.672645 | 4.3:+82683546 | MS.gene50004:CDS |
| CCGTAAGATTCCTCCCATCG+AGG | 0.673715 | 4.3:-82685276 | None:intergenic |
| GTATGATCAATATGGTGAGG+AGG | 0.684615 | 4.3:+82683283 | MS.gene50004:CDS |
| GACTAATGATGGTGTTGACG+GGG | 0.692431 | 4.3:-82685300 | None:intergenic |
| GAAAATCCACCTGCACCTGG+GGG | 0.693417 | 4.3:-82683326 | None:intergenic |
| TGTGTATGATCAATATGGTG+AGG | 0.703352 | 4.3:+82683280 | MS.gene50004:CDS |
| GAGAAGGGAAATGAACAGAG+AGG | 0.703900 | 4.3:+82685115 | MS.gene50004:CDS |
| ATGATCAATATGGTGAGGAG+GGG | 0.712167 | 4.3:+82683285 | MS.gene50004:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAATTTTGATAATTTTAATT+GGG | + | chr4.3:82682297-82682316 | MS.gene50004:intron | 10.0% |
| !!! | TCAATTTTGATAATTTTAAT+TGG | + | chr4.3:82682296-82682315 | MS.gene50004:intron | 10.0% |
| !! | AAAGAATAATTTCATGAAAT+GGG | - | chr4.3:82684514-82684533 | None:intergenic | 15.0% |
| !! | ATAAACAGCTTAATTATATT+AGG | + | chr4.3:82683873-82683892 | MS.gene50004:intron | 15.0% |
| !!! | TGTGTTTAATTTTATGATTT+TGG | + | chr4.3:82682840-82682859 | MS.gene50004:intron | 15.0% |
| !!! | TTGTAAAGTTTTGATTTTTT+GGG | + | chr4.3:82682333-82682352 | MS.gene50004:intron | 15.0% |
| !!! | TTTGTAAAGTTTTGATTTTT+TGG | + | chr4.3:82682332-82682351 | MS.gene50004:intron | 15.0% |
| !!! | TTTTATGATTTTGGATAATT+TGG | + | chr4.3:82682849-82682868 | MS.gene50004:intron | 15.0% |
| !! | AAATAATCAAATTTCCGTTA+AGG | + | chr4.3:82683841-82683860 | MS.gene50004:intron | 20.0% |
| !! | GAAAGAATAATTTCATGAAA+TGG | - | chr4.3:82684515-82684534 | None:intergenic | 20.0% |
| !! | TCATATGAAGAAGTAATTAA+AGG | + | chr4.3:82685325-82685344 | MS.gene50004:CDS | 20.0% |
| !! | TGATACTTATAGTTCTTAAA+TGG | + | chr4.3:82684179-82684198 | MS.gene50004:intron | 20.0% |
| !! | TTAATTACTTCTTCATATGA+TGG | - | chr4.3:82685325-82685344 | None:intergenic | 20.0% |
| !!! | ATTGTTGATTTTGGATAATT+TGG | + | chr4.3:82682406-82682425 | MS.gene50004:intron | 20.0% |
| !!! | ATTTTATGAGTAAATGACTT+TGG | - | chr4.3:82684690-82684709 | None:intergenic | 20.0% |
| !!! | TGTAAAGTTTTGATTTTTTG+GGG | + | chr4.3:82682334-82682353 | MS.gene50004:intron | 20.0% |
| !!! | TGTGTTTTTATTGTTGATTT+TGG | + | chr4.3:82682397-82682416 | MS.gene50004:intron | 20.0% |
| !!! | TTGGATAATTTGGAAATTTT+GGG | + | chr4.3:82682416-82682435 | MS.gene50004:intron | 20.0% |
| !!! | TTGTTATTTTCTTGTGATTT+AGG | + | chr4.3:82683045-82683064 | MS.gene50004:intron | 20.0% |
| !!! | TTTGGATAATTTGGAAATTT+TGG | + | chr4.3:82682415-82682434 | MS.gene50004:intron | 20.0% |
| !!! | TTTTTGTTTTGATTGTGATT+AGG | + | chr4.3:82683086-82683105 | MS.gene50004:intron | 20.0% |
| ! | AATAAGCTAAAAACAGCTTA+TGG | + | chr4.3:82683993-82684012 | MS.gene50004:intron | 25.0% |
| ! | ATAAACATGATGAAGAATGT+TGG | - | chr4.3:82684292-82684311 | None:intergenic | 25.0% |
| ! | GAATGAAATAGCATATAGAA+AGG | - | chr4.3:82684217-82684236 | None:intergenic | 25.0% |
| ! | TGCAATAAGACATGTTTAAA+TGG | + | chr4.3:82684404-82684423 | MS.gene50004:intron | 25.0% |
| ! | TTAGGATTACTTGGAAATTT+CGG | + | chr4.3:82682931-82682950 | MS.gene50004:intron | 25.0% |
| !! | CAAAATAATTCTTCTTTTGC+TGG | + | chr4.3:82684236-82684255 | MS.gene50004:intron | 25.0% |
| !! | TCTTGTGATTTAGAATCATT+TGG | + | chr4.3:82683193-82683212 | MS.gene50004:intron | 25.0% |
| !! | TGGATAATTTGGAAATTTTG+GGG | + | chr4.3:82682417-82682436 | MS.gene50004:intron | 25.0% |
| !! | TGTATGTTTTCTTATTCTGA+AGG | + | chr4.3:82685014-82685033 | MS.gene50004:intron | 25.0% |
| !! | TTAGAATCATTTGGAATTGT+TGG | + | chr4.3:82683202-82683221 | MS.gene50004:intron | 25.0% |
| !! | TTGTGTTTTTCTTGTGATTT+AGG | + | chr4.3:82682701-82682720 | MS.gene50004:intron | 25.0% |
| !! | TTGTGTTTTTCTTGTGATTT+TGG | + | chr4.3:82682701-82682720 | MS.gene50004:intron | 25.0% |
| !! | TTTGGATAATTTGGAATTGT+GGG | + | chr4.3:82682858-82682877 | MS.gene50004:intron | 25.0% |
| !! | TTTTGTGATTTTGGATCATT+TGG | + | chr4.3:82682778-82682797 | MS.gene50004:intron | 25.0% |
| !!! | AGGTTTACAATTTTAGCTTA+TGG | + | chr4.3:82682746-82682765 | MS.gene50004:intron | 25.0% |
| !!! | ATTTGGAATTGTGAAGTTTT+AGG | + | chr4.3:82682646-82682665 | MS.gene50004:intron | 25.0% |
| !!! | GATCATTTGTTTGATTTTTG+GGG | + | chr4.3:82682493-82682512 | MS.gene50004:intron | 25.0% |
| !!! | GGATCATTTGTTTGATTTTT+GGG | + | chr4.3:82682492-82682511 | MS.gene50004:intron | 25.0% |
| !!! | GGTGTTTAATTTTGTGTTTT+TGG | + | chr4.3:82682459-82682478 | MS.gene50004:intron | 25.0% |
| !!! | GGTTTACAATTTTAGCTTAT+GGG | + | chr4.3:82682747-82682766 | MS.gene50004:intron | 25.0% |
| !!! | GTTGTTTTCATAAGCTATAT+TGG | + | chr4.3:82683958-82683977 | MS.gene50004:intron | 25.0% |
| !!! | GTTTACAATTTTAGCTTATG+GGG | + | chr4.3:82682748-82682767 | MS.gene50004:intron | 25.0% |
| !!! | GTTTTTTTCGTTGTTGATTT+TGG | + | chr4.3:82682554-82682573 | MS.gene50004:intron | 25.0% |
| !!! | TAGAAAGTGTTGTCATATAA+CGG | - | chr4.3:82684850-82684869 | None:intergenic | 25.0% |
| !!! | TCTGGAAATCTTCATTTTTT+TGG | - | chr4.3:82683633-82683652 | None:intergenic | 25.0% |
| !!! | TGAGATGTTTTTGAAATGTT+GGG | + | chr4.3:82683152-82683171 | MS.gene50004:intron | 25.0% |
| !!! | TGGATCATTTGTTTGATTTT+TGG | + | chr4.3:82682491-82682510 | MS.gene50004:intron | 25.0% |
| !!! | TGTATTTTGTTATGTGTTGT+TGG | + | chr4.3:82683773-82683792 | MS.gene50004:intron | 25.0% |
| !!! | TGTGTTTTTCTTGTTGATTT+TGG | + | chr4.3:82682471-82682490 | MS.gene50004:intron | 25.0% |
| !!! | TTTGATTTTTTGGGGTTTTT+GGG | + | chr4.3:82682342-82682361 | MS.gene50004:intron | 25.0% |
| !!! | TTTGGAATTGTGAAGTTTTA+GGG | + | chr4.3:82682647-82682666 | MS.gene50004:intron | 25.0% |
| !!! | TTTTGATTTTTTGGGGTTTT+TGG | + | chr4.3:82682341-82682360 | MS.gene50004:intron | 25.0% |
| !!! | TTTTGGATAATTTGGAATTG+TGG | + | chr4.3:82682857-82682876 | MS.gene50004:intron | 25.0% |
| AATTCCTAAAGGAAGAGAAA+AGG | - | chr4.3:82683517-82683536 | None:intergenic | 30.0% | |
| AGTTTGGAGGATTTGTATAA+AGG | + | chr4.3:82683602-82683621 | MS.gene50004:CDS | 30.0% | |
| ATAATAAAAACAAGGTCTGC+AGG | - | chr4.3:82685148-82685167 | None:intergenic | 30.0% | |
| CAATGCAACTAGGTTAATAT+AGG | - | chr4.3:82683702-82683721 | None:intergenic | 30.0% | |
| CTATATTAACCTAGTTGCAT+TGG | + | chr4.3:82683700-82683719 | MS.gene50004:intron | 30.0% | |
| GAAGAAGTAATTAAAGGAGA+GGG | + | chr4.3:82685331-82685350 | MS.gene50004:CDS | 30.0% | |
| GTGATGTGATGTAACTATTA+AGG | + | chr4.3:82684357-82684376 | MS.gene50004:intron | 30.0% | |
| GTTTGGAGGATTTGTATAAA+GGG | + | chr4.3:82683603-82683622 | MS.gene50004:CDS | 30.0% | |
| TAGGATTACTTGGAAATTTC+GGG | + | chr4.3:82682932-82682951 | MS.gene50004:intron | 30.0% | |
| TATTAGAGCTGTGAATTGAA+TGG | + | chr4.3:82684975-82684994 | MS.gene50004:intron | 30.0% | |
| TCAAATAAGCCAATCTAAAC+AGG | + | chr4.3:82684084-82684103 | MS.gene50004:intron | 30.0% | |
| TCTCGTCGATAATAAAAACA+AGG | - | chr4.3:82685156-82685175 | None:intergenic | 30.0% | |
| TGAAGAAGTAATTAAAGGAG+AGG | + | chr4.3:82685330-82685349 | MS.gene50004:CDS | 30.0% | |
| TTATTATGGCCTGTTTAGAT+TGG | - | chr4.3:82684096-82684115 | None:intergenic | 30.0% | |
| TTGTCTAAAAAACTTGAGTC+TGG | - | chr4.3:82684458-82684477 | None:intergenic | 30.0% | |
| ! | AGGAACAAAGATAACTTTTC+CGG | + | chr4.3:82685093-82685112 | MS.gene50004:CDS | 30.0% |
| ! | AGGGTTACAATTTGGAATTA+AGG | + | chr4.3:82682815-82682834 | MS.gene50004:intron | 30.0% |
| ! | AGTGATTTCGATTTGTGAAT+AGG | + | chr4.3:82683232-82683251 | MS.gene50004:intron | 30.0% |
| ! | ATTTGGAATTGTGAAGTTTC+AGG | + | chr4.3:82682795-82682814 | MS.gene50004:intron | 30.0% |
| ! | GGATAATTTGGAAATTTTGG+GGG | + | chr4.3:82682418-82682437 | MS.gene50004:intron | 30.0% |
| ! | GGGTTACAATTTGAAATGTT+GGG | + | chr4.3:82683013-82683032 | MS.gene50004:intron | 30.0% |
| ! | GGTTACAATTTGAAATGTTG+GGG | + | chr4.3:82683014-82683033 | MS.gene50004:intron | 30.0% |
| ! | GGTTACAATTTGGAATTATG+AGG | + | chr4.3:82682954-82682973 | MS.gene50004:intron | 30.0% |
| ! | GTTACAATTTGAAATGTTGG+GGG | + | chr4.3:82683015-82683034 | MS.gene50004:intron | 30.0% |
| ! | GTTGCATAATTTGGAATGTT+GGG | + | chr4.3:82682515-82682534 | MS.gene50004:intron | 30.0% |
| ! | TCTTGTGATTTAGGATCATT+TGG | + | chr4.3:82683054-82683073 | MS.gene50004:intron | 30.0% |
| ! | TCTTGTGATTTAGGATTACT+TGG | + | chr4.3:82682922-82682941 | MS.gene50004:intron | 30.0% |
| ! | TGGGTTACAATTTGAAATGT+TGG | + | chr4.3:82683012-82683031 | MS.gene50004:intron | 30.0% |
| ! | TTCAGAGATTTGCTTGAATT+TGG | - | chr4.3:82682237-82682256 | None:intergenic | 30.0% |
| ! | TTCTTGTGATTTTGGACATT+TGG | + | chr4.3:82682709-82682728 | MS.gene50004:intron | 30.0% |
| ! | TTGCATAATTTGGAATGTTG+GGG | + | chr4.3:82682516-82682535 | MS.gene50004:intron | 30.0% |
| ! | TTGGATCATTTGGACATTTT+GGG | + | chr4.3:82682573-82682592 | MS.gene50004:intron | 30.0% |
| ! | TTGTTATTAGGGTTCTTATC+AGG | - | chr4.3:82682200-82682219 | None:intergenic | 30.0% |
| ! | TTTCTCTTCCTTTAGGAATT+CGG | + | chr4.3:82683517-82683536 | MS.gene50004:CDS | 30.0% |
| ! | TTTGGAATTGTGAAGTTTCA+GGG | + | chr4.3:82682796-82682815 | MS.gene50004:intron | 30.0% |
| ! | TTTGGATCAGTTGGATTTTT+GGG | + | chr4.3:82682993-82683012 | MS.gene50004:intron | 30.0% |
| ! | TTTGGATCATTTGGACATTT+TGG | + | chr4.3:82682572-82682591 | MS.gene50004:intron | 30.0% |
| ! | TTTTGGATCAGTTGGATTTT+TGG | + | chr4.3:82682992-82683011 | MS.gene50004:intron | 30.0% |
| !! | CAAAATCTGCCACTTTATTA+TGG | - | chr4.3:82684110-82684129 | None:intergenic | 30.0% |
| !! | CAGCATCTTTCTTGTTATTA+GGG | - | chr4.3:82682211-82682230 | None:intergenic | 30.0% |
| !! | GGTGTTTGATTTTGTGATTT+TGG | + | chr4.3:82682769-82682788 | MS.gene50004:intron | 30.0% |
| !! | GTGTTTGATTTTGGATCATT+TGG | + | chr4.3:82682629-82682648 | MS.gene50004:intron | 30.0% |
| !! | TCAGCATCTTTCTTGTTATT+AGG | - | chr4.3:82682212-82682231 | None:intergenic | 30.0% |
| !! | TTCATATGATGGACTAATGA+TGG | - | chr4.3:82685314-82685333 | None:intergenic | 30.0% |
| !!! | ATTTGGAGTTTTGAGGTTTT+AGG | + | chr4.3:82682726-82682745 | MS.gene50004:intron | 30.0% |
| !!! | ATTTTTGGGGTTGCATAATT+TGG | + | chr4.3:82682506-82682525 | MS.gene50004:intron | 30.0% |
| !!! | GAAGTTTTAGGGTTACAATT+TGG | + | chr4.3:82682658-82682677 | MS.gene50004:intron | 30.0% |
| !!! | GAGATGTTTTTGAAATGTTG+GGG | + | chr4.3:82683153-82683172 | MS.gene50004:intron | 30.0% |
| !!! | GGAAATCTTCATTTTTTTGG+TGG | - | chr4.3:82683630-82683649 | None:intergenic | 30.0% |
| !!! | GTGAGATGTTTTTGAAATGT+TGG | + | chr4.3:82683151-82683170 | MS.gene50004:intron | 30.0% |
| !!! | GTTGTTGATTTTGGATCATT+TGG | + | chr4.3:82682563-82682582 | MS.gene50004:intron | 30.0% |
| !!! | TTGATTTTTTGGGGTTTTTG+GGG | + | chr4.3:82682343-82682362 | MS.gene50004:intron | 30.0% |
| !!! | TTTTGTGTTTTTGGATCAGT+TGG | + | chr4.3:82682984-82683003 | MS.gene50004:intron | 30.0% |
| AACCAATCCAAATTGTAACC+CGG | - | chr4.3:82682889-82682908 | None:intergenic | 35.0% | |
| AGAATTTCCTCAACTGTAGT+AGG | - | chr4.3:82685043-82685062 | None:intergenic | 35.0% | |
| AGAGCTGTGTATGATCAATA+TGG | + | chr4.3:82683275-82683294 | MS.gene50004:CDS | 35.0% | |
| AGGATTACTTGGAAATTTCG+GGG | + | chr4.3:82682933-82682952 | MS.gene50004:intron | 35.0% | |
| ATTAAGCTGTTTATCCGAAC+AGG | - | chr4.3:82683867-82683886 | None:intergenic | 35.0% | |
| CCAATAAAACCAATGCAACT+AGG | - | chr4.3:82683712-82683731 | None:intergenic | 35.0% | |
| CTAAACAGGCCATAATAAAG+TGG | + | chr4.3:82684098-82684117 | MS.gene50004:intron | 35.0% | |
| GAAATTTCGGGGTTACAATT+TGG | + | chr4.3:82682944-82682963 | MS.gene50004:intron | 35.0% | |
| GAAGTTTCAGGGTTACAATT+TGG | + | chr4.3:82682807-82682826 | MS.gene50004:intron | 35.0% | |
| GATGTATTCAAAAGCTGTGT+TGG | + | chr4.3:82684775-82684794 | MS.gene50004:intron | 35.0% | |
| GGGGTACAATTTGAATTGAT+GGG | + | chr4.3:82682437-82682456 | MS.gene50004:intron | 35.0% | |
| GGGTACAATTTGAATTGATG+GGG | + | chr4.3:82682438-82682457 | MS.gene50004:intron | 35.0% | |
| TAAAGACTTGTGAGTCTGTT+TGG | - | chr4.3:82684049-82684068 | None:intergenic | 35.0% | |
| TATGATCAATATGGTGAGGA+GGG | + | chr4.3:82683284-82683303 | MS.gene50004:CDS | 35.0% | |
| TGTGTATGATCAATATGGTG+AGG | + | chr4.3:82683280-82683299 | MS.gene50004:CDS | 35.0% | |
| TTATGGAAACAGCTTATGAC+AGG | - | chr4.3:82684020-82684039 | None:intergenic | 35.0% | |
| TTGCATTTCGATCTATCTGA+AGG | - | chr4.3:82682127-82682146 | None:intergenic | 35.0% | |
| ! | AAAGATAACTTTTCCGGAGA+AGG | + | chr4.3:82685099-82685118 | MS.gene50004:CDS | 35.0% |
| ! | AAGATAACTTTTCCGGAGAA+GGG | + | chr4.3:82685100-82685119 | MS.gene50004:CDS | 35.0% |
| ! | ACATATTTTCCGAGTTCTTC+GGG | + | chr4.3:82683405-82683424 | MS.gene50004:CDS | 35.0% |
| ! | AGGGTTACAATTTGGAATGA+TGG | + | chr4.3:82682666-82682685 | MS.gene50004:intron | 35.0% |
| ! | ATGACCTTTTCTCTTCCTTT+AGG | + | chr4.3:82683510-82683529 | MS.gene50004:CDS | 35.0% |
| ! | GACATATTTTCCGAGTTCTT+CGG | + | chr4.3:82683404-82683423 | MS.gene50004:CDS | 35.0% |
| ! | GCTTCAGTTCTACTATTTTC+TGG | - | chr4.3:82684613-82684632 | None:intergenic | 35.0% |
| ! | GGGTTACAATTTGGAATGAT+GGG | + | chr4.3:82682667-82682686 | MS.gene50004:intron | 35.0% |
| ! | GGTTACAATTTGGAATGATG+GGG | + | chr4.3:82682668-82682687 | MS.gene50004:intron | 35.0% |
| ! | GGTTGCATAATTTGGAATGT+TGG | + | chr4.3:82682514-82682533 | MS.gene50004:intron | 35.0% |
| ! | TGCATAATTTGGAATGTTGG+GGG | + | chr4.3:82682517-82682536 | MS.gene50004:intron | 35.0% |
| ! | TGGATCATTTGGACATTTTG+GGG | + | chr4.3:82682574-82682593 | MS.gene50004:intron | 35.0% |
| !! | ATCGCAAACTTGCTATGAAA+TGG | + | chr4.3:82682171-82682190 | MS.gene50004:CDS | 35.0% |
| !! | TTTGGAATTGTGGGTTTTTC+CGG | + | chr4.3:82682867-82682886 | MS.gene50004:intron | 35.0% |
| !! | TTTGGACATTTGGAGTTTTG+AGG | + | chr4.3:82682719-82682738 | MS.gene50004:intron | 35.0% |
| !!! | CCTAGTTGCATTGGTTTTAT+TGG | + | chr4.3:82683709-82683728 | MS.gene50004:intron | 35.0% |
| !!! | TGCAAGCAATTTTAGCTGAT+GGG | + | chr4.3:82682606-82682625 | MS.gene50004:intron | 35.0% |
| !!! | TTGCAAGCAATTTTAGCTGA+TGG | + | chr4.3:82682605-82682624 | MS.gene50004:intron | 35.0% |
| !!! | TTGGACATTTTGGGGTTTTT+GGG | + | chr4.3:82682582-82682601 | MS.gene50004:intron | 35.0% |
| !!! | TTTGGACATTTTGGGGTTTT+TGG | + | chr4.3:82682581-82682600 | MS.gene50004:intron | 35.0% |
| AAACAAGGTCTGCAGGTATA+AGG | - | chr4.3:82685141-82685160 | None:intergenic | 40.0% | |
| AATATGTCATCCGCACTTCT+CGG | - | chr4.3:82683392-82683411 | None:intergenic | 40.0% | |
| AATTTCCGTTAAGGCCTGTT+CGG | + | chr4.3:82683850-82683869 | MS.gene50004:intron | 40.0% | |
| AGTCTGTTTGGAAGAGCTTA+TGG | - | chr4.3:82684037-82684056 | None:intergenic | 40.0% | |
| ATGATCAATATGGTGAGGAG+GGG | + | chr4.3:82683285-82683304 | MS.gene50004:CDS | 40.0% | |
| CAAGGCAATGTTCTCTCTAT+CGG | - | chr4.3:82683581-82683600 | None:intergenic | 40.0% | |
| CCTAAGGAACCTTCCAAAAA+GGG | + | chr4.3:82685364-82685383 | MS.gene50004:CDS | 40.0% | |
| CCTTCAATTTCCTACAGCAT+CGG | - | chr4.3:82684552-82684571 | None:intergenic | 40.0% | |
| CTAACAATTGAGATCAAGCC+AGG | + | chr4.3:82685061-82685080 | MS.gene50004:CDS | 40.0% | |
| GTATGATCAATATGGTGAGG+AGG | + | chr4.3:82683283-82683302 | MS.gene50004:CDS | 40.0% | |
| TAAAATTCCGCTGTGCTGTA+GGG | + | chr4.3:82684904-82684923 | MS.gene50004:intron | 40.0% | |
| TACAAATCCTCCAAACTGCA+AGG | - | chr4.3:82683599-82683618 | None:intergenic | 40.0% | |
| TCCTAAGGAACCTTCCAAAA+AGG | + | chr4.3:82685363-82685382 | MS.gene50004:CDS | 40.0% | |
| TGATCATACACCTCTCTCTT+TGG | - | chr4.3:82683126-82683145 | None:intergenic | 40.0% | |
| TGCTCTGATGTAAGTCTTGA+TGG | - | chr4.3:82685421-82685440 | None:intergenic | 40.0% | |
| TGTCAATAATCGCTTGATGC+CGG | - | chr4.3:82685449-82685468 | None:intergenic | 40.0% | |
| TTAAAATTCCGCTGTGCTGT+AGG | + | chr4.3:82684903-82684922 | MS.gene50004:intron | 40.0% | |
| TTCCGGGTTACAATTTGGAT+TGG | + | chr4.3:82682884-82682903 | MS.gene50004:intron | 40.0% | |
| TTGGAAGGTTCCTTAGGAAT+TGG | - | chr4.3:82685361-82685380 | None:intergenic | 40.0% | |
| TTTATCCGAACAGGCCTTAA+CGG | - | chr4.3:82683858-82683877 | None:intergenic | 40.0% | |
| TTTGTTCCTTTCTTCCAACC+TGG | - | chr4.3:82685082-82685101 | None:intergenic | 40.0% | |
| ! | AGAGAGGTGTATGATCAGTA+TGG | + | chr4.3:82683129-82683148 | MS.gene50004:intron | 40.0% |
| ! | ATAATTTGGAATGTTGGGGG+TGG | + | chr4.3:82682520-82682539 | MS.gene50004:intron | 40.0% |
| ! | CTCAAGTTTCCCTTTTTGGA+AGG | - | chr4.3:82685376-82685395 | None:intergenic | 40.0% |
| ! | GACTCTCAAGTTTCCCTTTT+TGG | - | chr4.3:82685380-82685399 | None:intergenic | 40.0% |
| ! | GGGGGTACAATTTGAATTGA+TGG | + | chr4.3:82682436-82682455 | MS.gene50004:intron | 40.0% |
| ! | GGGGTTGTAATTTGCATGTT+GGG | + | chr4.3:82682362-82682381 | MS.gene50004:intron | 40.0% |
| ! | GGTTTTTCCGGGTTACAATT+TGG | + | chr4.3:82682879-82682898 | MS.gene50004:intron | 40.0% |
| ! | TAAAGTGGCAGATTTTGCGA+TGG | + | chr4.3:82684113-82684132 | MS.gene50004:intron | 40.0% |
| ! | TCATACACAGCTCTCTTTTG+TGG | - | chr4.3:82683269-82683288 | None:intergenic | 40.0% |
| ! | TGCACTTTTCCTCATCACAT+TGG | - | chr4.3:82683558-82683577 | None:intergenic | 40.0% |
| ! | TGGACTAATGATGGTGTTGA+CGG | - | chr4.3:82685305-82685324 | None:intergenic | 40.0% |
| ! | TGGGGTTGTAATTTGCATGT+TGG | + | chr4.3:82682361-82682380 | MS.gene50004:intron | 40.0% |
| ! | TTCGGGTTTCAAAGACCATT+TGG | + | chr4.3:82683422-82683441 | MS.gene50004:CDS | 40.0% |
| ! | TTGGAATTGTGGGTTTTTCC+GGG | + | chr4.3:82682868-82682887 | MS.gene50004:intron | 40.0% |
| !! | AGAGATGTTACTGATTCCAG+CGG | + | chr4.3:82683650-82683669 | MS.gene50004:CDS | 40.0% |
| !! | GTTCTACTATTTTCTGGCAC+AGG | - | chr4.3:82684607-82684626 | None:intergenic | 40.0% |
| !! | TCTTTGAAACCCGAAGAACT+CGG | - | chr4.3:82683417-82683436 | None:intergenic | 40.0% |
| !!! | GCAAGCAATTTTAGCTGATG+GGG | + | chr4.3:82682607-82682626 | MS.gene50004:intron | 40.0% |
| AAACTAGAAAACTCACCCGC+TGG | - | chr4.3:82683669-82683688 | None:intergenic | 45.0% | |
| AACATTGCCTTGCAGTTTGG+AGG | + | chr4.3:82683589-82683608 | MS.gene50004:CDS | 45.0% | |
| AAGGAAGCCTACTACAGTTG+AGG | + | chr4.3:82685033-82685052 | MS.gene50004:intron | 45.0% | |
| AAGGATCTGCCAATGTGATG+AGG | + | chr4.3:82683546-82683565 | MS.gene50004:CDS | 45.0% | |
| AGCCTCATACTGTCTTCAAG+AGG | + | chr4.3:82685176-82685195 | MS.gene50004:CDS | 45.0% | |
| CAATTGAGATCAAGCCAGGT+TGG | + | chr4.3:82685065-82685084 | MS.gene50004:CDS | 45.0% | |
| CATACTGTCTTCAAGAGGGA+CGG | + | chr4.3:82685181-82685200 | MS.gene50004:CDS | 45.0% | |
| CCGATGCTGTAGGAAATTGA+AGG | + | chr4.3:82684549-82684568 | MS.gene50004:intron | 45.0% | |
| CTCTGTTCATTTCCCTTCTC+CGG | - | chr4.3:82685115-82685134 | None:intergenic | 45.0% | |
| CTTACATCAGAGCAGAAGAC+CGG | + | chr4.3:82685427-82685446 | MS.gene50004:CDS | 45.0% | |
| CTTTCCGAGGGGAATGTTTA+GGG | + | chr4.3:82683487-82683506 | MS.gene50004:CDS | 45.0% | |
| GAGAACATTGCCTTGCAGTT+TGG | + | chr4.3:82683586-82683605 | MS.gene50004:CDS | 45.0% | |
| GAGAAGGGAAATGAACAGAG+AGG | + | chr4.3:82685115-82685134 | MS.gene50004:CDS | 45.0% | |
| GAGTGATCAACCAAAGAGAG+AGG | + | chr4.3:82683113-82683132 | MS.gene50004:intron | 45.0% | |
| GCCTCATACTGTCTTCAAGA+GGG | + | chr4.3:82685177-82685196 | MS.gene50004:CDS | 45.0% | |
| GCTGGAATCAGTAACATCTC+TGG | - | chr4.3:82683651-82683670 | None:intergenic | 45.0% | |
| GGATTGAACCGGAACATTGT+CGG | - | chr4.3:82683371-82683390 | None:intergenic | 45.0% | |
| GGGTTTCAAAGACCATTTGG+CGG | + | chr4.3:82683425-82683444 | MS.gene50004:CDS | 45.0% | |
| TCATCCCTAAACATTCCCCT+CGG | - | chr4.3:82683494-82683513 | None:intergenic | 45.0% | |
| TCCCTCTTGAAGACAGTATG+AGG | - | chr4.3:82685181-82685200 | None:intergenic | 45.0% | |
| TTTCAAAGACCATTTGGCGG+TGG | + | chr4.3:82683428-82683447 | MS.gene50004:CDS | 45.0% | |
| ! | AGAGGGTATGCCAATTCCTA+AGG | + | chr4.3:82685348-82685367 | MS.gene50004:CDS | 45.0% |
| ! | ATCAAGCCAGGTTGGAAGAA+AGG | + | chr4.3:82685073-82685092 | MS.gene50004:CDS | 45.0% |
| ! | TCTCTTGTAGAAGCTCTGAC+AGG | + | chr4.3:82685232-82685251 | MS.gene50004:CDS | 45.0% |
| ! | TCTTCCTTTAGGAATTCGGC+CGG | + | chr4.3:82683521-82683540 | MS.gene50004:CDS | 45.0% |
| !! | CCCTTTTTGGAAGGTTCCTT+AGG | - | chr4.3:82685367-82685386 | None:intergenic | 45.0% |
| !! | GACTAATGATGGTGTTGACG+GGG | - | chr4.3:82685303-82685322 | None:intergenic | 45.0% |
| !! | GAGATGTTACTGATTCCAGC+GGG | + | chr4.3:82683651-82683670 | MS.gene50004:CDS | 45.0% |
| !! | GCTGATGGGGTGTTTGATTT+TGG | + | chr4.3:82682620-82682639 | MS.gene50004:intron | 45.0% |
| !! | GGACTAATGATGGTGTTGAC+GGG | - | chr4.3:82685304-82685323 | None:intergenic | 45.0% |
| AAATAGCTACCCTCGATGGG+AGG | + | chr4.3:82685266-82685285 | MS.gene50004:CDS | 50.0% | |
| AAGACCATTTGGCGGTGGAA+TGG | + | chr4.3:82683433-82683452 | MS.gene50004:CDS | 50.0% | |
| AGACCATTTGGCGGTGGAAT+GGG | + | chr4.3:82683434-82683453 | MS.gene50004:CDS | 50.0% | |
| ATATGGTGAGGAGGGGTTGA+AGG | + | chr4.3:82683292-82683311 | MS.gene50004:CDS | 50.0% | |
| CACATTGGCAGATCCTTCAC+CGG | - | chr4.3:82683543-82683562 | None:intergenic | 50.0% | |
| CATTGTCTAGCCGATGCTGT+AGG | + | chr4.3:82684539-82684558 | MS.gene50004:intron | 50.0% | |
| CCCAAATAGCTACCCTCGAT+GGG | + | chr4.3:82685263-82685282 | MS.gene50004:CDS | 50.0% | |
| CCCATCGAGGGTAGCTATTT+GGG | - | chr4.3:82685266-82685285 | None:intergenic | 50.0% | |
| CCTCGATGGGAGGAATCTTA+CGG | + | chr4.3:82685276-82685295 | MS.gene50004:CDS | 50.0% | |
| CGTAAGATTCCTCCCATCGA+GGG | - | chr4.3:82685278-82685297 | None:intergenic | 50.0% | |
| GCTTTCCGAGGGGAATGTTT+AGG | + | chr4.3:82683486-82683505 | MS.gene50004:CDS | 50.0% | |
| TATGGTGAGGAGGGGTTGAA+GGG | + | chr4.3:82683293-82683312 | MS.gene50004:CDS | 50.0% | |
| TCCCATCGAGGGTAGCTATT+TGG | - | chr4.3:82685267-82685286 | None:intergenic | 50.0% | |
| TTCACCGGCCGAATTCCTAA+AGG | - | chr4.3:82683528-82683547 | None:intergenic | 50.0% | |
| TTTAGGAATTCGGCCGGTGA+AGG | + | chr4.3:82683527-82683546 | MS.gene50004:CDS | 50.0% | |
| ! | TGAGTATCGCAGAACAGCAG+CGG | + | chr4.3:82684876-82684895 | MS.gene50004:intron | 50.0% |
| !! | ATGGTGGACCGACAATGTTC+CGG | + | chr4.3:82683360-82683379 | MS.gene50004:CDS | 50.0% |
| ATAGCAGCCCTACAGCACAG+CGG | - | chr4.3:82684914-82684933 | None:intergenic | 55.0% | |
| ATGGTGAGGAGGGGTTGAAG+GGG | + | chr4.3:82683294-82683313 | MS.gene50004:CDS | 55.0% | |
| CCGCACTTCTCGGATTGAAC+CGG | - | chr4.3:82683382-82683401 | None:intergenic | 55.0% | |
| CCGGTTCAATCCGAGAAGTG+CGG | + | chr4.3:82683379-82683398 | MS.gene50004:CDS | 55.0% | |
| CCGTAAGATTCCTCCCATCG+AGG | - | chr4.3:82685279-82685298 | None:intergenic | 55.0% | |
| CGGAAAATCCACCTGCACCT+GGG | - | chr4.3:82683331-82683350 | None:intergenic | 55.0% | |
| GAAAATCCACCTGCACCTGG+GGG | - | chr4.3:82683329-82683348 | None:intergenic | 55.0% | |
| GCCCAAATAGCTACCCTCGA+TGG | + | chr4.3:82685262-82685281 | MS.gene50004:CDS | 55.0% | |
| GGAAAATCCACCTGCACCTG+GGG | - | chr4.3:82683330-82683349 | None:intergenic | 55.0% | |
| GGCGGTGGAATGGGTGATAT+GGG | + | chr4.3:82683443-82683462 | MS.gene50004:CDS | 55.0% | |
| GGTGATATGGGTGGTCATCC+TGG | + | chr4.3:82683455-82683474 | MS.gene50004:CDS | 55.0% | |
| GGTGGAATGGGTGATATGGG+TGG | + | chr4.3:82683446-82683465 | MS.gene50004:CDS | 55.0% | |
| TCACCCATTCCACCGCCAAA+TGG | - | chr4.3:82683440-82683459 | None:intergenic | 55.0% | |
| TCGGAAAATCCACCTGCACC+TGG | - | chr4.3:82683332-82683351 | None:intergenic | 55.0% | |
| TGGCGGTGGAATGGGTGATA+TGG | + | chr4.3:82683442-82683461 | MS.gene50004:CDS | 55.0% | |
| ! | GGATTTTCCGACGGTGGTGA+TGG | + | chr4.3:82683341-82683360 | MS.gene50004:CDS | 55.0% |
| !! | GGTGCAGGTGGATTTTCCGA+CGG | + | chr4.3:82683332-82683351 | MS.gene50004:CDS | 55.0% |
| !! | TGGTGCATCTGGCTTTCCGA+GGG | + | chr4.3:82683475-82683494 | MS.gene50004:CDS | 55.0% |
| !!! | TTTTCCGACGGTGGTGATGG+TGG | + | chr4.3:82683344-82683363 | MS.gene50004:CDS | 55.0% |
| CTCGGAAAGCCAGATGCACC+AGG | - | chr4.3:82683476-82683495 | None:intergenic | 60.0% | |
| GGTGGTCATCCTGGTGCATC+TGG | + | chr4.3:82683464-82683483 | MS.gene50004:CDS | 60.0% | |
| !! | CTGGTGCATCTGGCTTTCCG+AGG | + | chr4.3:82683474-82683493 | MS.gene50004:CDS | 60.0% |
| !! | GCAGGTGGATTTTCCGACGG+TGG | + | chr4.3:82683335-82683354 | MS.gene50004:CDS | 60.0% |
| !! | GGTGCATCTGGCTTTCCGAG+GGG | + | chr4.3:82683476-82683495 | MS.gene50004:CDS | 60.0% |
| AATCCACCTGCACCTGGGGG+AGG | - | chr4.3:82683326-82683345 | None:intergenic | 65.0% | |
| CGGTCCACCATCACCACCGT+CGG | - | chr4.3:82683351-82683370 | None:intergenic | 65.0% | |
| AAGGGGCAGATGCCTCCCCC+AGG | + | chr4.3:82683311-82683330 | MS.gene50004:CDS | 70.0% | |
| ATGCCTCCCCCAGGTGCAGG+TGG | + | chr4.3:82683320-82683339 | MS.gene50004:CDS | 70.0% | |
| CAGATGCCTCCCCCAGGTGC+AGG | + | chr4.3:82683317-82683336 | MS.gene50004:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 82682101 | 82685477 | 82682101 | ID=MS.gene50004 |
| chr4.3 | mRNA | 82682101 | 82685477 | 82682101 | ID=MS.gene50004.t1;Parent=MS.gene50004 |
| chr4.3 | exon | 82682101 | 82682265 | 82682101 | ID=MS.gene50004.t1.exon1;Parent=MS.gene50004.t1 |
| chr4.3 | CDS | 82682101 | 82682265 | 82682101 | ID=cds.MS.gene50004.t1;Parent=MS.gene50004.t1 |
| chr4.3 | exon | 82683254 | 82683672 | 82683254 | ID=MS.gene50004.t1.exon2;Parent=MS.gene50004.t1 |
| chr4.3 | CDS | 82683254 | 82683672 | 82683254 | ID=cds.MS.gene50004.t1;Parent=MS.gene50004.t1 |
| chr4.3 | exon | 82685036 | 82685477 | 82685036 | ID=MS.gene50004.t1.exon3;Parent=MS.gene50004.t1 |
| chr4.3 | CDS | 82685036 | 82685477 | 82685036 | ID=cds.MS.gene50004.t1;Parent=MS.gene50004.t1 |
| Gene Sequence |
| Protein sequence |
