Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047354.t1 | XP_003593642.1 | 94.5 | 347 | 12 | 2 | 1 | 347 | 1 | 340 | 2.70E-182 | 647.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047354.t1 | Q5R8J8 | 43.9 | 358 | 164 | 8 | 1 | 345 | 1 | 334 | 2.6e-69 | 263.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047354.t1 | A2Q505 | 94.5 | 347 | 12 | 2 | 1 | 347 | 1 | 340 | 1.9e-182 | 647.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene031675 | MS.gene047354 | PPI |
| MS.gene006630 | MS.gene047354 | PPI |
| MS.gene047354 | MS.gene037465 | PPI |
| MS.gene050322 | MS.gene047354 | PPI |
| MS.gene35396 | MS.gene047354 | PPI |
| MS.gene066761 | MS.gene047354 | PPI |
| MS.gene047354 | MS.gene77100 | PPI |
| MS.gene045555 | MS.gene047354 | PPI |
| MS.gene047354 | MS.gene50004 | PPI |
| MS.gene01472 | MS.gene047354 | PPI |
| MS.gene007227 | MS.gene047354 | PPI |
| MS.gene047354 | MS.gene84339 | PPI |
| MS.gene034468 | MS.gene047354 | PPI |
| MS.gene50013 | MS.gene047354 | PPI |
| MS.gene66767 | MS.gene047354 | PPI |
| MS.gene43051 | MS.gene047354 | PPI |
| MS.gene072961 | MS.gene047354 | PPI |
| MS.gene014782 | MS.gene047354 | PPI |
| MS.gene01038 | MS.gene047354 | PPI |
| MS.gene047354 | MS.gene75767 | PPI |
| MS.gene002499 | MS.gene047354 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047354.t1 | MTR_2g014470 | 97.118 | 347 | 3 | 2 | 1 | 347 | 1 | 340 | 0.0 | 681 |
| MS.gene047354.t1 | MTR_4g078850 | 78.510 | 349 | 67 | 4 | 1 | 346 | 1 | 344 | 0.0 | 536 |
| MS.gene047354.t1 | MTR_4g015840 | 69.452 | 347 | 97 | 4 | 1 | 346 | 1 | 339 | 1.42e-167 | 471 |
| MS.gene047354.t1 | MTR_2g090705 | 69.429 | 350 | 88 | 3 | 1 | 346 | 1 | 335 | 7.81e-163 | 458 |
| MS.gene047354.t1 | MTR_2g014480 | 68.605 | 344 | 92 | 6 | 1 | 336 | 1 | 336 | 3.24e-152 | 431 |
| MS.gene047354.t1 | MTR_3g108020 | 55.652 | 345 | 133 | 4 | 1 | 345 | 1 | 325 | 1.41e-127 | 369 |
| MS.gene047354.t1 | MTR_4g015840 | 68.924 | 251 | 72 | 3 | 97 | 346 | 17 | 262 | 5.74e-114 | 332 |
| MS.gene047354.t1 | MTR_3g437360 | 38.872 | 337 | 196 | 7 | 2 | 329 | 3 | 338 | 5.37e-68 | 217 |
| MS.gene047354.t1 | MTR_5g037880 | 54.237 | 177 | 81 | 0 | 169 | 345 | 98 | 274 | 2.56e-66 | 211 |
| MS.gene047354.t1 | MTR_5g037880 | 60.000 | 75 | 23 | 1 | 4 | 71 | 5 | 79 | 7.47e-21 | 91.3 |
| MS.gene047354.t1 | MTR_3g437840 | 51.553 | 161 | 78 | 0 | 186 | 346 | 2 | 162 | 5.67e-54 | 175 |
| MS.gene047354.t1 | MTR_7g109340 | 32.464 | 345 | 201 | 6 | 5 | 345 | 27 | 343 | 2.82e-50 | 171 |
| MS.gene047354.t1 | MTR_2g006890 | 45.000 | 180 | 98 | 1 | 167 | 345 | 196 | 375 | 3.56e-44 | 156 |
| MS.gene047354.t1 | MTR_8g006430 | 33.333 | 387 | 173 | 12 | 5 | 345 | 15 | 362 | 4.82e-44 | 157 |
| MS.gene047354.t1 | MTR_3g088140 | 44.000 | 175 | 97 | 1 | 165 | 338 | 172 | 346 | 7.47e-44 | 154 |
| MS.gene047354.t1 | MTR_3g437850 | 35.610 | 205 | 89 | 5 | 3 | 202 | 1 | 167 | 4.84e-32 | 118 |
| MS.gene047354.t1 | MTR_3g087030 | 28.065 | 367 | 215 | 11 | 4 | 344 | 82 | 425 | 5.21e-32 | 124 |
| MS.gene047354.t1 | MTR_2g087660 | 33.511 | 188 | 117 | 4 | 161 | 345 | 176 | 358 | 3.15e-25 | 105 |
| MS.gene047354.t1 | MTR_2g087660 | 60.563 | 71 | 23 | 2 | 5 | 75 | 14 | 79 | 5.14e-12 | 67.0 |
| MS.gene047354.t1 | MTR_4g050420 | 32.979 | 188 | 118 | 4 | 161 | 345 | 174 | 356 | 1.02e-24 | 104 |
| MS.gene047354.t1 | MTR_4g050420 | 59.155 | 71 | 24 | 2 | 5 | 75 | 14 | 79 | 3.84e-11 | 64.3 |
| MS.gene047354.t1 | MTR_5g065160 | 27.397 | 365 | 204 | 12 | 4 | 338 | 83 | 416 | 3.87e-23 | 100 |
| MS.gene047354.t1 | MTR_5g065160 | 27.123 | 365 | 205 | 12 | 4 | 338 | 76 | 409 | 4.76e-23 | 100 |
| MS.gene047354.t1 | MTR_5g065160 | 27.397 | 365 | 204 | 12 | 4 | 338 | 82 | 415 | 4.84e-23 | 99.8 |
| MS.gene047354.t1 | MTR_5g065160 | 27.123 | 365 | 205 | 12 | 4 | 338 | 83 | 416 | 6.62e-23 | 99.8 |
| MS.gene047354.t1 | MTR_2g104030 | 44.697 | 132 | 51 | 4 | 4 | 135 | 70 | 179 | 2.34e-21 | 95.1 |
| MS.gene047354.t1 | MTR_7g101070 | 60.000 | 65 | 26 | 0 | 4 | 68 | 358 | 422 | 4.95e-20 | 91.3 |
| MS.gene047354.t1 | MTR_7g112360 | 46.970 | 66 | 32 | 1 | 5 | 67 | 17 | 82 | 4.55e-16 | 75.1 |
| MS.gene047354.t1 | MTR_7g069480 | 51.429 | 70 | 32 | 1 | 3 | 72 | 26 | 93 | 7.49e-16 | 79.0 |
| MS.gene047354.t1 | MTR_7g112360 | 46.970 | 66 | 32 | 1 | 5 | 67 | 17 | 82 | 7.57e-16 | 73.2 |
| MS.gene047354.t1 | MTR_5g012530 | 48.649 | 74 | 36 | 1 | 4 | 75 | 12 | 85 | 9.79e-16 | 78.6 |
| MS.gene047354.t1 | MTR_3g027580 | 52.113 | 71 | 33 | 1 | 4 | 74 | 89 | 158 | 2.57e-15 | 77.0 |
| MS.gene047354.t1 | MTR_2g087660 | 32.836 | 134 | 84 | 3 | 161 | 293 | 176 | 304 | 2.88e-15 | 75.9 |
| MS.gene047354.t1 | MTR_2g087660 | 60.563 | 71 | 23 | 2 | 5 | 75 | 14 | 79 | 2.88e-12 | 67.0 |
| MS.gene047354.t1 | MTR_6g471050 | 25.000 | 352 | 204 | 16 | 30 | 346 | 7 | 333 | 4.69e-15 | 76.3 |
| MS.gene047354.t1 | MTR_6g027110 | 44.000 | 75 | 38 | 1 | 3 | 73 | 1 | 75 | 5.87e-15 | 71.6 |
| MS.gene047354.t1 | MTR_5g065860 | 50.000 | 64 | 31 | 1 | 4 | 67 | 48 | 110 | 6.72e-15 | 71.6 |
| MS.gene047354.t1 | MTR_1g110310 | 49.296 | 71 | 35 | 1 | 4 | 74 | 16 | 85 | 1.56e-14 | 74.7 |
| MS.gene047354.t1 | MTR_6g027030 | 45.333 | 75 | 37 | 1 | 3 | 73 | 1 | 75 | 1.81e-14 | 72.0 |
| MS.gene047354.t1 | MTR_8g022310 | 44.928 | 69 | 33 | 1 | 4 | 67 | 10 | 78 | 3.21e-14 | 71.2 |
| MS.gene047354.t1 | MTR_8g022310 | 44.928 | 69 | 33 | 1 | 4 | 67 | 10 | 78 | 4.99e-14 | 70.5 |
| MS.gene047354.t1 | MTR_4g085070 | 50.000 | 60 | 27 | 1 | 11 | 67 | 19 | 78 | 5.09e-14 | 69.3 |
| MS.gene047354.t1 | MTR_8g022310 | 43.478 | 69 | 34 | 1 | 4 | 67 | 10 | 78 | 5.33e-14 | 70.5 |
| MS.gene047354.t1 | MTR_8g022310 | 43.478 | 69 | 34 | 1 | 4 | 67 | 10 | 78 | 7.09e-14 | 70.9 |
| MS.gene047354.t1 | MTR_5g035770 | 47.945 | 73 | 37 | 1 | 4 | 76 | 25 | 96 | 1.71e-13 | 71.2 |
| MS.gene047354.t1 | MTR_6g026940 | 44.928 | 69 | 34 | 1 | 3 | 67 | 1 | 69 | 2.10e-13 | 68.2 |
| MS.gene047354.t1 | MTR_1g052110 | 47.692 | 65 | 33 | 1 | 6 | 70 | 40 | 103 | 2.82e-13 | 69.7 |
| MS.gene047354.t1 | MTR_4g023470 | 39.167 | 120 | 59 | 4 | 5 | 123 | 87 | 193 | 5.75e-13 | 70.1 |
| MS.gene047354.t1 | MTR_2g436560 | 38.710 | 124 | 64 | 5 | 4 | 123 | 104 | 219 | 1.32e-12 | 68.6 |
| MS.gene047354.t1 | MTR_7g092380 | 42.105 | 76 | 40 | 2 | 6 | 78 | 24 | 98 | 4.23e-12 | 66.2 |
| MS.gene047354.t1 | MTR_1g029460 | 41.667 | 72 | 41 | 1 | 3 | 74 | 5 | 75 | 4.86e-12 | 67.0 |
| MS.gene047354.t1 | MTR_5g004570 | 45.070 | 71 | 38 | 1 | 4 | 74 | 6 | 75 | 1.59e-11 | 63.9 |
| MS.gene047354.t1 | MTR_1g087580 | 34.646 | 127 | 76 | 3 | 224 | 345 | 59 | 183 | 7.43e-11 | 61.2 |
| MS.gene047354.t1 | MTR_4g094275 | 41.558 | 77 | 40 | 3 | 2 | 75 | 49 | 123 | 8.80e-11 | 60.8 |
| MS.gene047354.t1 | MTR_4g109510 | 44.118 | 68 | 35 | 1 | 5 | 69 | 9 | 76 | 9.11e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047354.t1 | AT2G20560 | 74.000 | 350 | 72 | 4 | 1 | 345 | 1 | 336 | 0.0 | 516 |
| MS.gene047354.t1 | AT4G28480 | 69.101 | 356 | 90 | 3 | 1 | 345 | 1 | 347 | 1.29e-170 | 478 |
| MS.gene047354.t1 | AT3G08910 | 66.185 | 346 | 92 | 6 | 1 | 346 | 1 | 321 | 4.03e-160 | 451 |
| MS.gene047354.t1 | AT5G01390 | 63.143 | 350 | 111 | 4 | 1 | 347 | 1 | 335 | 2.51e-155 | 439 |
| MS.gene047354.t1 | AT4G28480 | 60.870 | 345 | 79 | 3 | 1 | 345 | 1 | 289 | 1.99e-141 | 402 |
| MS.gene047354.t1 | AT5G25530 | 58.757 | 354 | 122 | 7 | 1 | 346 | 1 | 338 | 1.01e-138 | 397 |
| MS.gene047354.t1 | AT5G25530 | 57.459 | 362 | 122 | 8 | 1 | 346 | 1 | 346 | 7.60e-136 | 390 |
| MS.gene047354.t1 | AT1G10350 | 56.196 | 347 | 149 | 3 | 1 | 345 | 1 | 346 | 6.09e-129 | 373 |
| MS.gene047354.t1 | AT3G47940 | 53.740 | 361 | 136 | 4 | 1 | 345 | 1 | 346 | 1.98e-127 | 369 |
| MS.gene047354.t1 | AT1G59725 | 54.598 | 348 | 135 | 3 | 1 | 345 | 1 | 328 | 9.11e-126 | 364 |
| MS.gene047354.t1 | AT2G20550 | 55.326 | 291 | 72 | 4 | 103 | 345 | 3 | 283 | 8.91e-99 | 294 |
| MS.gene047354.t1 | AT2G20550 | 55.326 | 291 | 72 | 4 | 103 | 345 | 3 | 283 | 8.91e-99 | 294 |
| MS.gene047354.t1 | AT5G01390 | 45.533 | 347 | 119 | 7 | 1 | 347 | 1 | 277 | 2.12e-89 | 270 |
| MS.gene047354.t1 | AT5G01390 | 55.238 | 210 | 76 | 4 | 1 | 207 | 1 | 195 | 1.25e-68 | 215 |
| MS.gene047354.t1 | AT5G01390 | 61.029 | 136 | 48 | 2 | 1 | 135 | 1 | 132 | 2.65e-49 | 166 |
| MS.gene047354.t1 | AT5G01390 | 55.634 | 142 | 24 | 1 | 206 | 347 | 136 | 238 | 8.66e-44 | 151 |
| MS.gene047354.t1 | AT1G44160 | 47.753 | 178 | 93 | 0 | 168 | 345 | 176 | 353 | 5.69e-47 | 163 |
| MS.gene047354.t1 | AT3G62600 | 32.378 | 349 | 206 | 7 | 2 | 346 | 24 | 346 | 3.70e-45 | 158 |
| MS.gene047354.t1 | AT1G11040 | 43.353 | 173 | 98 | 0 | 166 | 338 | 253 | 425 | 1.13e-42 | 153 |
| MS.gene047354.t1 | AT3G44110 | 33.702 | 362 | 201 | 11 | 5 | 345 | 15 | 358 | 2.10e-39 | 144 |
| MS.gene047354.t1 | AT5G22060 | 33.149 | 362 | 204 | 10 | 5 | 345 | 15 | 359 | 2.22e-37 | 139 |
| MS.gene047354.t1 | AT3G44110 | 33.735 | 332 | 181 | 11 | 5 | 315 | 15 | 328 | 7.74e-33 | 125 |
| MS.gene047354.t1 | AT1G80030 | 28.647 | 377 | 209 | 13 | 4 | 344 | 75 | 427 | 3.76e-29 | 117 |
| MS.gene047354.t1 | AT1G80030 | 28.647 | 377 | 209 | 13 | 4 | 344 | 75 | 427 | 5.14e-29 | 117 |
| MS.gene047354.t1 | AT1G80030 | 28.647 | 377 | 209 | 13 | 4 | 344 | 75 | 427 | 5.14e-29 | 117 |
| MS.gene047354.t1 | AT1G80030 | 28.647 | 377 | 209 | 13 | 4 | 344 | 75 | 427 | 5.14e-29 | 117 |
| MS.gene047354.t1 | AT2G22360 | 65.333 | 75 | 20 | 2 | 4 | 76 | 86 | 156 | 6.98e-22 | 96.3 |
| MS.gene047354.t1 | AT2G22360 | 30.147 | 136 | 91 | 3 | 211 | 344 | 295 | 428 | 5.94e-12 | 67.0 |
| MS.gene047354.t1 | AT3G17830 | 53.261 | 92 | 37 | 2 | 2 | 91 | 61 | 148 | 5.86e-21 | 94.4 |
| MS.gene047354.t1 | AT4G39960 | 58.904 | 73 | 28 | 1 | 4 | 76 | 85 | 155 | 2.44e-20 | 92.0 |
| MS.gene047354.t1 | AT4G39960 | 30.147 | 136 | 91 | 3 | 211 | 344 | 301 | 434 | 1.69e-12 | 68.6 |
| MS.gene047354.t1 | AT4G39960 | 58.904 | 73 | 28 | 1 | 4 | 76 | 85 | 155 | 2.44e-20 | 92.0 |
| MS.gene047354.t1 | AT4G39960 | 30.147 | 136 | 91 | 3 | 211 | 344 | 301 | 434 | 1.69e-12 | 68.6 |
| MS.gene047354.t1 | AT5G48030 | 46.903 | 113 | 50 | 3 | 4 | 116 | 94 | 196 | 8.30e-18 | 84.7 |
| MS.gene047354.t1 | AT5G16650 | 59.375 | 64 | 25 | 1 | 4 | 67 | 11 | 73 | 6.60e-17 | 77.8 |
| MS.gene047354.t1 | AT5G03160 | 53.846 | 65 | 30 | 0 | 4 | 68 | 370 | 434 | 6.92e-17 | 82.0 |
| MS.gene047354.t1 | AT5G16650 | 59.375 | 64 | 25 | 1 | 4 | 67 | 11 | 73 | 8.45e-17 | 76.3 |
| MS.gene047354.t1 | AT1G59980 | 47.826 | 69 | 35 | 1 | 6 | 74 | 25 | 92 | 1.53e-15 | 77.4 |
| MS.gene047354.t1 | AT2G41000 | 47.826 | 69 | 32 | 1 | 3 | 67 | 2 | 70 | 1.64e-15 | 75.1 |
| MS.gene047354.t1 | AT1G68370 | 52.113 | 71 | 33 | 1 | 4 | 74 | 17 | 86 | 2.26e-15 | 77.0 |
| MS.gene047354.t1 | AT1G56300 | 48.485 | 66 | 31 | 1 | 5 | 67 | 14 | 79 | 2.41e-15 | 73.2 |
| MS.gene047354.t1 | AT1G56300 | 48.485 | 66 | 31 | 1 | 5 | 67 | 14 | 79 | 2.58e-15 | 72.0 |
| MS.gene047354.t1 | AT1G59980 | 47.826 | 69 | 35 | 1 | 6 | 74 | 25 | 92 | 4.08e-15 | 76.3 |
| MS.gene047354.t1 | AT2G41000 | 47.826 | 69 | 32 | 1 | 3 | 67 | 2 | 70 | 5.50e-15 | 72.8 |
| MS.gene047354.t1 | AT3G08970 | 51.316 | 76 | 33 | 2 | 2 | 77 | 25 | 96 | 2.06e-14 | 74.7 |
| MS.gene047354.t1 | AT3G08970 | 51.316 | 76 | 33 | 2 | 2 | 77 | 25 | 96 | 2.06e-14 | 74.7 |
| MS.gene047354.t1 | AT2G35720 | 47.945 | 73 | 36 | 1 | 4 | 74 | 15 | 87 | 3.22e-14 | 73.9 |
| MS.gene047354.t1 | AT2G21510 | 50.000 | 72 | 35 | 1 | 4 | 75 | 6 | 76 | 1.68e-13 | 71.2 |
| MS.gene047354.t1 | AT2G21510 | 50.000 | 72 | 35 | 1 | 4 | 75 | 6 | 76 | 1.68e-13 | 71.2 |
| MS.gene047354.t1 | AT2G21510 | 50.000 | 72 | 35 | 1 | 4 | 75 | 6 | 76 | 1.74e-13 | 71.2 |
| MS.gene047354.t1 | AT2G21510 | 50.000 | 72 | 35 | 1 | 4 | 75 | 6 | 76 | 1.74e-13 | 71.2 |
| MS.gene047354.t1 | AT2G21510 | 50.000 | 72 | 35 | 1 | 4 | 75 | 6 | 76 | 2.30e-13 | 70.5 |
| MS.gene047354.t1 | AT2G33735 | 43.077 | 65 | 36 | 1 | 4 | 68 | 22 | 85 | 1.05e-12 | 64.7 |
| MS.gene047354.t1 | AT2G33735 | 43.077 | 65 | 36 | 1 | 4 | 68 | 22 | 85 | 1.05e-12 | 64.7 |
| MS.gene047354.t1 | AT1G71000 | 45.455 | 66 | 33 | 1 | 5 | 67 | 9 | 74 | 1.66e-12 | 65.5 |
| MS.gene047354.t1 | AT1G24120 | 44.595 | 74 | 40 | 1 | 4 | 77 | 20 | 92 | 1.74e-12 | 68.6 |
| MS.gene047354.t1 | AT5G06910 | 46.154 | 65 | 34 | 1 | 6 | 70 | 31 | 94 | 2.00e-12 | 67.4 |
| MS.gene047354.t1 | AT1G71000 | 45.455 | 66 | 33 | 1 | 5 | 67 | 9 | 74 | 3.66e-12 | 64.3 |
| MS.gene047354.t1 | AT5G05750 | 36.283 | 113 | 61 | 3 | 4 | 116 | 114 | 215 | 5.37e-12 | 66.2 |
| MS.gene047354.t1 | AT4G39150 | 47.222 | 72 | 37 | 1 | 4 | 75 | 6 | 76 | 5.62e-12 | 66.6 |
| MS.gene047354.t1 | AT4G39150 | 47.222 | 72 | 37 | 1 | 4 | 75 | 6 | 76 | 5.62e-12 | 66.6 |
| MS.gene047354.t1 | AT4G39150 | 47.222 | 72 | 37 | 1 | 4 | 75 | 6 | 76 | 5.62e-12 | 66.6 |
| MS.gene047354.t1 | AT3G14200 | 45.312 | 64 | 33 | 1 | 6 | 67 | 14 | 77 | 7.05e-12 | 64.7 |
| MS.gene047354.t1 | AT3G13310 | 46.774 | 62 | 29 | 1 | 6 | 67 | 66 | 123 | 2.21e-11 | 62.0 |
| MS.gene047354.t1 | AT1G21080 | 43.038 | 79 | 44 | 1 | 3 | 81 | 5 | 82 | 2.52e-11 | 64.7 |
| MS.gene047354.t1 | AT1G21080 | 43.038 | 79 | 44 | 1 | 3 | 81 | 5 | 82 | 2.61e-11 | 64.7 |
| MS.gene047354.t1 | AT4G13830 | 38.806 | 67 | 40 | 1 | 3 | 68 | 65 | 131 | 2.84e-11 | 61.6 |
| MS.gene047354.t1 | AT5G49060 | 46.269 | 67 | 34 | 1 | 4 | 70 | 99 | 163 | 3.24e-11 | 64.3 |
| MS.gene047354.t1 | AT5G49060 | 46.269 | 67 | 34 | 1 | 4 | 70 | 99 | 163 | 3.24e-11 | 64.3 |
| MS.gene047354.t1 | AT4G13830 | 38.806 | 67 | 40 | 1 | 3 | 68 | 65 | 131 | 3.77e-11 | 62.0 |
| MS.gene047354.t1 | AT1G72416 | 34.831 | 89 | 49 | 2 | 4 | 90 | 5 | 86 | 4.38e-11 | 62.0 |
| MS.gene047354.t1 | AT1G72416 | 34.444 | 90 | 50 | 2 | 4 | 91 | 5 | 87 | 6.57e-11 | 61.2 |
| MS.gene047354.t1 | AT3G12170 | 43.077 | 65 | 36 | 1 | 6 | 70 | 13 | 76 | 6.77e-11 | 62.4 |
| MS.gene047354.t1 | AT1G72416 | 34.444 | 90 | 50 | 2 | 4 | 91 | 5 | 87 | 7.47e-11 | 61.2 |
| MS.gene047354.t1 | AT1G72416 | 34.444 | 90 | 50 | 2 | 4 | 91 | 5 | 87 | 8.12e-11 | 60.8 |
| MS.gene047354.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 9.58e-11 | 63.2 |
| MS.gene047354.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 9.58e-11 | 63.2 |
| MS.gene047354.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 9.58e-11 | 63.2 |
| MS.gene047354.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 9.58e-11 | 63.2 |
| MS.gene047354.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 9.58e-11 | 63.2 |
| MS.gene047354.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 9.58e-11 | 63.2 |
| MS.gene047354.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 9.58e-11 | 63.2 |
| MS.gene047354.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 9.58e-11 | 63.2 |
| MS.gene047354.t1 | AT5G37380 | 50.000 | 66 | 31 | 1 | 3 | 68 | 65 | 128 | 9.58e-11 | 63.2 |
Find 91 sgRNAs with CRISPR-Local
Find 161 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTTCTTTGAAGGATCTTT+TGG | 0.174093 | 2.3:+70354143 | None:intergenic |
| TTCAGATATCTCTTTGAATT+TGG | 0.183628 | 2.3:+70355841 | None:intergenic |
| AAGATATCGTTTGCGTTTCT+TGG | 0.221316 | 2.3:+70355542 | None:intergenic |
| TTGACTTCTGAGCAGAAAAT+TGG | 0.241130 | 2.3:-70354080 | MS.gene047354:CDS |
| TTATTTGAGGGATTCTTATC+AGG | 0.267987 | 2.3:+70355878 | None:intergenic |
| GGATGAATAACATTGTTTAT+AGG | 0.269485 | 2.3:+70354206 | None:intergenic |
| GGTTGCTCATTTCCTTTCTC+AGG | 0.283976 | 2.3:+70354395 | None:intergenic |
| TATGGAGAAGAAGGGCTTAA+AGG | 0.285303 | 2.3:-70355647 | MS.gene047354:CDS |
| AGTCAAACCAGGGTGGAAAA+AGG | 0.301287 | 2.3:-70354435 | MS.gene047354:CDS |
| TCGGGTATTCAAGCCCGTTT+GGG | 0.303828 | 2.3:-70355508 | MS.gene047354:CDS |
| TTCGGGTATTCAAGCCCGTT+TGG | 0.333587 | 2.3:-70355509 | MS.gene047354:CDS |
| AGTCTTGAGGAGCTCTATAA+AGG | 0.348476 | 2.3:-70355317 | MS.gene047354:CDS |
| AAAGCAATTTATGATCAATA+TGG | 0.348727 | 2.3:-70355665 | MS.gene047354:CDS |
| CTTATCAGGGTGCCACTTCA+TGG | 0.353470 | 2.3:+70355892 | None:intergenic |
| CTTCAAAGAAGGGTAATCTT+AGG | 0.357619 | 2.3:-70354133 | MS.gene047354:CDS |
| TACAAGAGATGGCAATGATT+TGG | 0.359667 | 2.3:-70354315 | MS.gene047354:CDS |
| CTAAGATTACCCTTCTTTGA+AGG | 0.367122 | 2.3:+70354134 | None:intergenic |
| AGATCTGCTGGTATCACATT+TGG | 0.371997 | 2.3:+70354374 | None:intergenic |
| AGATCCTTTGGTGGAATGTT+TGG | 0.375285 | 2.3:-70355437 | MS.gene047354:CDS |
| CTCAGCGTCTTTCTTATTTG+AGG | 0.384413 | 2.3:+70355865 | None:intergenic |
| GGAATAGGCATACCTTCCTT+TGG | 0.388950 | 2.3:+70354164 | None:intergenic |
| CCACCACCTCAAGATGCTTC+TGG | 0.389485 | 2.3:-70355617 | MS.gene047354:CDS |
| GAGATGGACCAACGACGTTT+AGG | 0.392296 | 2.3:-70355571 | MS.gene047354:CDS |
| ATGGAGAAGAAGGGCTTAAA+GGG | 0.402600 | 2.3:-70355646 | MS.gene047354:CDS |
| AGAGGTGGAGCCAGATCCTT+TGG | 0.409550 | 2.3:-70355449 | MS.gene047354:CDS |
| TCACTAGCAGAAGCTTTAAC+AGG | 0.415182 | 2.3:-70354275 | MS.gene047354:CDS |
| CACCTCAAGATGCTTCTGGC+GGG | 0.421807 | 2.3:-70355613 | MS.gene047354:CDS |
| GGAATAACCTCTTCATAGCT+TGG | 0.426392 | 2.3:+70354185 | None:intergenic |
| AATTGGAATCAAGAAACTTC+TGG | 0.433972 | 2.3:-70354063 | MS.gene047354:CDS |
| AAACCGTAATGTTACCTCAT+AGG | 0.442940 | 2.3:+70355817 | None:intergenic |
| TATGATCAATATGGAGAAGA+AGG | 0.445033 | 2.3:-70355656 | MS.gene047354:CDS |
| GTCTCACAACACTGGATGGC+AGG | 0.445115 | 2.3:-70354241 | MS.gene047354:CDS |
| TCAGCGTCTTTCTTATTTGA+GGG | 0.447077 | 2.3:+70355866 | None:intergenic |
| TCATAAATTGCTTTCTTCTG+TGG | 0.457705 | 2.3:+70355674 | None:intergenic |
| GTCTTGAGGAGCTCTATAAA+GGG | 0.464624 | 2.3:-70355316 | MS.gene047354:CDS |
| TCCAAAAGATCCTTCAAAGA+AGG | 0.470055 | 2.3:-70354144 | MS.gene047354:CDS |
| TGCTCAGAAGTCAACCTAGC+TGG | 0.472997 | 2.3:+70354089 | None:intergenic |
| CTTCTTCAACTCTTCTTCTG+TGG | 0.473979 | 2.3:+70355931 | None:intergenic |
| GTTGCTCATTTCCTTTCTCA+GGG | 0.474664 | 2.3:+70354396 | None:intergenic |
| TATTTGAGGGATTCTTATCA+GGG | 0.478544 | 2.3:+70355879 | None:intergenic |
| TCCTTTGGTGGAATGTTTGG+TGG | 0.483436 | 2.3:-70355434 | MS.gene047354:CDS |
| ATAACAAATATAAGATCTGC+TGG | 0.490598 | 2.3:+70354362 | None:intergenic |
| AAACATTCCACCAAAGGATC+TGG | 0.493654 | 2.3:+70355439 | None:intergenic |
| AAAATCACATTCCCTGAGAA+AGG | 0.497224 | 2.3:-70354407 | MS.gene047354:CDS |
| ATTGTTAAGATTTCCTCCAC+TGG | 0.504925 | 2.3:+70354461 | None:intergenic |
| GCTGGTGGGAATGGAATGAG+AGG | 0.505271 | 2.3:-70355467 | MS.gene047354:CDS |
| TCAATATCAAGTTTCCAGCT+AGG | 0.511373 | 2.3:-70354103 | MS.gene047354:CDS |
| CCAGAAGCATCTTGAGGTGG+TGG | 0.511552 | 2.3:+70355617 | None:intergenic |
| ACATTCTTCCAAAGTGGAGA+TGG | 0.515684 | 2.3:-70355587 | MS.gene047354:CDS |
| CCAAAAGATCCTTCAAAGAA+GGG | 0.516873 | 2.3:-70354143 | MS.gene047354:CDS |
| TTACTTCATTTGATGAAGCT+AGG | 0.518857 | 2.3:-70355397 | MS.gene047354:CDS |
| AGAGATATCTGAAGCCTATG+AGG | 0.524531 | 2.3:-70355831 | MS.gene047354:intron |
| CGAGGACCTTGCTGACGCAT+AGG | 0.535830 | 2.3:+70355374 | None:intergenic |
| TCGTTGGTCCATCTCCACTT+TGG | 0.541943 | 2.3:+70355579 | None:intergenic |
| CATGGTGTATTTACAAGAGA+TGG | 0.542850 | 2.3:-70354326 | MS.gene047354:CDS |
| CCACCTCAAGATGCTTCTGG+CGG | 0.544744 | 2.3:-70355614 | MS.gene047354:CDS |
| ATCGAAAACTTGCCATGAAG+TGG | 0.546006 | 2.3:-70355904 | MS.gene047354:CDS |
| TAGATTGCCTTGTAGTCTTG+AGG | 0.546637 | 2.3:-70355330 | MS.gene047354:CDS |
| CACTGTTCGTCTCACAACAC+TGG | 0.550423 | 2.3:-70354249 | MS.gene047354:CDS |
| TAGAGCTCCTCAAGACTACA+AGG | 0.560767 | 2.3:+70355323 | None:intergenic |
| TCAATAGCAGCTGCCTTGCG+AGG | 0.571839 | 2.3:+70355356 | None:intergenic |
| TTAACAATTGAAGTCAAACC+AGG | 0.573245 | 2.3:-70354446 | MS.gene047354:CDS |
| CACAGAAGAAGAGTTGAAGA+AGG | 0.577915 | 2.3:-70355930 | MS.gene047354:CDS |
| AGGGAAATTGCTGATGCAAG+TGG | 0.584073 | 2.3:-70355269 | MS.gene047354:CDS |
| ATGATCAATATGGAGAAGAA+GGG | 0.585118 | 2.3:-70355655 | MS.gene047354:CDS |
| TATTCATCCAAGCTATGAAG+AGG | 0.585414 | 2.3:-70354192 | MS.gene047354:CDS |
| CGGGTATTCAAGCCCGTTTG+GGG | 0.586346 | 2.3:-70355507 | MS.gene047354:CDS |
| ACCTCAAGATGCTTCTGGCG+GGG | 0.588669 | 2.3:-70355612 | MS.gene047354:CDS |
| GGGAAATTGCTGATGCAAGT+GGG | 0.597387 | 2.3:-70355268 | MS.gene047354:intron |
| GGTGGAGCCAGATCCTTTGG+TGG | 0.611596 | 2.3:-70355446 | MS.gene047354:CDS |
| GGATTGAACCTAAACGTCGT+TGG | 0.612417 | 2.3:+70355563 | None:intergenic |
| AGAAACTTCTGGCACCGTAG+TGG | 0.613726 | 2.3:-70354052 | None:intergenic |
| GTTCGTCTCACAACACTGGA+TGG | 0.619421 | 2.3:-70354245 | MS.gene047354:CDS |
| CTATGAAGAGGTTATTCCAA+AGG | 0.619874 | 2.3:-70354180 | MS.gene047354:CDS |
| GGTGGGAATGGAATGAGAGG+TGG | 0.620935 | 2.3:-70355464 | MS.gene047354:CDS |
| GCTAGGCCTATGCGTCAGCA+AGG | 0.621159 | 2.3:-70355380 | MS.gene047354:CDS |
| ACCACCAAACATTCCACCAA+AGG | 0.627179 | 2.3:+70355433 | None:intergenic |
| TCTCACAACACTGGATGGCA+GGG | 0.628562 | 2.3:-70354240 | MS.gene047354:CDS |
| GAAGAGGTTATTCCAAAGGA+AGG | 0.631458 | 2.3:-70354176 | MS.gene047354:CDS |
| CCGCCAGAAGCATCTTGAGG+TGG | 0.632302 | 2.3:+70355614 | None:intergenic |
| CAGGAAAACTATGCCAGTGG+AGG | 0.633181 | 2.3:-70354474 | MS.gene047354:CDS |
| TTGCAGGAAAACTATGCCAG+TGG | 0.635655 | 2.3:-70354477 | MS.gene047354:intron |
| GCCCCGCCAGAAGCATCTTG+AGG | 0.639522 | 2.3:+70355611 | None:intergenic |
| GCGTCAGCAAGGTCCTCGCA+AGG | 0.646053 | 2.3:-70355369 | MS.gene047354:CDS |
| GGGTATTCAAGCCCGTTTGG+GGG | 0.650237 | 2.3:-70355506 | MS.gene047354:CDS |
| GGGGCTACATTCTTCCAAAG+TGG | 0.666162 | 2.3:-70355593 | MS.gene047354:CDS |
| CTCAAATAAGAAAGACGCTG+AGG | 0.667226 | 2.3:-70355864 | MS.gene047354:CDS |
| TCTCTTGTAAATACACCATG+TGG | 0.682973 | 2.3:+70354329 | None:intergenic |
| TAACAATTGAAGTCAAACCA+GGG | 0.689215 | 2.3:-70354445 | MS.gene047354:CDS |
| CAATTGAAGTCAAACCAGGG+TGG | 0.720314 | 2.3:-70354442 | MS.gene047354:CDS |
| GTTATTGATGAGAAACCACA+TGG | 0.724666 | 2.3:-70354344 | MS.gene047354:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCTAAATTATTTTAAAAAAC+AGG | + | chr2.3:70354992-70355011 | None:intergenic | 10.0% |
| !! | TAGAAATTCTGAATATTAAT+TGG | - | chr2.3:70354301-70354320 | MS.gene047354:CDS | 15.0% |
| !!! | TATCTATTTCTTTAAACAAA+TGG | + | chr2.3:70355070-70355089 | None:intergenic | 15.0% |
| !! | AAAGCAATTTATGATCAATA+TGG | - | chr2.3:70354364-70354383 | MS.gene047354:CDS | 20.0% |
| !! | TAAAACAATGATATGAAACA+CGG | + | chr2.3:70355285-70355304 | None:intergenic | 20.0% |
| !!! | TTCTGAATATTAATTGGTTT+TGG | - | chr2.3:70354307-70354326 | MS.gene047354:CDS | 20.0% |
| ! | AATCTCCAATTTATGTCAAT+TGG | + | chr2.3:70354962-70354981 | None:intergenic | 25.0% |
| ! | ACAACTAGCAATTTAAAAAC+CGG | + | chr2.3:70355418-70355437 | None:intergenic | 25.0% |
| ! | ATAACAAATATAAGATCTGC+TGG | + | chr2.3:70355670-70355689 | None:intergenic | 25.0% |
| ! | CAAAAAGATGAAGATTTCAA+GGG | - | chr2.3:70354741-70354760 | MS.gene047354:intron | 25.0% |
| ! | CTAATTATTTATCTCTTTGC+AGG | - | chr2.3:70355536-70355555 | MS.gene047354:CDS | 25.0% |
| ! | GGATGAATAACATTGTTTAT+AGG | + | chr2.3:70355826-70355845 | None:intergenic | 25.0% |
| ! | TTCAGATATCTCTTTGAATT+TGG | + | chr2.3:70354191-70354210 | None:intergenic | 25.0% |
| ! | TTCATGACTCATAAATAAGA+TGG | - | chr2.3:70354826-70354845 | MS.gene047354:intron | 25.0% |
| !! | TCTTCTTTTACTAGTTGTTA+GGG | - | chr2.3:70354244-70354263 | MS.gene047354:CDS | 25.0% |
| !! | TTCTTCTTTTACTAGTTGTT+AGG | - | chr2.3:70354243-70354262 | MS.gene047354:CDS | 25.0% |
| !! | TTTCCTTTGTTTGGTTAAAT+TGG | - | chr2.3:70355512-70355531 | MS.gene047354:CDS | 25.0% |
| !!! | AAATTGCTAGTTGTTTTTGT+GGG | - | chr2.3:70355424-70355443 | MS.gene047354:CDS | 25.0% |
| !!! | TAAATTGCTAGTTGTTTTTG+TGG | - | chr2.3:70355423-70355442 | MS.gene047354:CDS | 25.0% |
| AAAAGTTGAACAGTTCAATC+TGG | - | chr2.3:70355316-70355335 | MS.gene047354:CDS | 30.0% | |
| AAGTTCAACATCAATTCTCT+GGG | - | chr2.3:70355462-70355481 | MS.gene047354:CDS | 30.0% | |
| AATTGGAATCAAGAAACTTC+TGG | - | chr2.3:70355966-70355985 | MS.gene047354:CDS | 30.0% | |
| AGACCAATTTAACCAAACAA+AGG | + | chr2.3:70355518-70355537 | None:intergenic | 30.0% | |
| ATCAAGATAGACATACAGAT+AGG | - | chr2.3:70354906-70354925 | MS.gene047354:intron | 30.0% | |
| ATCGACACTTATGATCAAAA+AGG | + | chr2.3:70354275-70354294 | None:intergenic | 30.0% | |
| ATGATCAATATGGAGAAGAA+GGG | - | chr2.3:70354374-70354393 | MS.gene047354:CDS | 30.0% | |
| ATTGAAGTTAAGTCATCCTA+TGG | + | chr2.3:70355115-70355134 | None:intergenic | 30.0% | |
| CCAAAAAGATGAAGATTTCA+AGG | - | chr2.3:70354740-70354759 | MS.gene047354:intron | 30.0% | |
| GGAAAAAATTCAGCCAAAAT+TGG | + | chr2.3:70355497-70355516 | None:intergenic | 30.0% | |
| TAACAATTGAAGTCAAACCA+GGG | - | chr2.3:70355584-70355603 | MS.gene047354:CDS | 30.0% | |
| TATGATCAATATGGAGAAGA+AGG | - | chr2.3:70354373-70354392 | MS.gene047354:CDS | 30.0% | |
| TATTTGAGGGATTCTTATCA+GGG | + | chr2.3:70354153-70354172 | None:intergenic | 30.0% | |
| TCATAAATTGCTTTCTTCTG+TGG | + | chr2.3:70354358-70354377 | None:intergenic | 30.0% | |
| TTAACAATTGAAGTCAAACC+AGG | - | chr2.3:70355583-70355602 | MS.gene047354:CDS | 30.0% | |
| TTACTTCATTTGATGAAGCT+AGG | - | chr2.3:70354632-70354651 | MS.gene047354:intron | 30.0% | |
| TTATTTGAGGGATTCTTATC+AGG | + | chr2.3:70354154-70354173 | None:intergenic | 30.0% | |
| ! | AGACTACTACAAGATTTTGA+AGG | - | chr2.3:70354063-70354082 | MS.gene047354:CDS | 30.0% |
| ! | ATATCTTTGCAGAGTTTTTC+GGG | - | chr2.3:70354503-70354522 | MS.gene047354:intron | 30.0% |
| ! | CCTTGAAATCTTCATCTTTT+TGG | + | chr2.3:70354743-70354762 | None:intergenic | 30.0% |
| ! | GATATCTTTGCAGAGTTTTT+CGG | - | chr2.3:70354502-70354521 | MS.gene047354:intron | 30.0% |
| !! | ATGAGTCTTTTAGGAAATAG+AGG | - | chr2.3:70354935-70354954 | MS.gene047354:intron | 30.0% |
| !!! | AATTGCTAGTTGTTTTTGTG+GGG | - | chr2.3:70355425-70355444 | MS.gene047354:CDS | 30.0% |
| !!! | GCTGAATTTTTTCCTTTGTT+TGG | - | chr2.3:70355503-70355522 | MS.gene047354:CDS | 30.0% |
| !!! | TGGTTTTGGTTTTATGATGA+AGG | - | chr2.3:70354321-70354340 | MS.gene047354:CDS | 30.0% |
| !!! | TTTGAAGGATCTTTTGGAAT+AGG | + | chr2.3:70355883-70355902 | None:intergenic | 30.0% |
| AAAATCACATTCCCTGAGAA+AGG | - | chr2.3:70355622-70355641 | MS.gene047354:CDS | 35.0% | |
| AAACCGTAATGTTACCTCAT+AGG | + | chr2.3:70354215-70354234 | None:intergenic | 35.0% | |
| AAGATATCGTTTGCGTTTCT+TGG | + | chr2.3:70354490-70354509 | None:intergenic | 35.0% | |
| AAGCCTATGAGGTAACATTA+CGG | - | chr2.3:70354209-70354228 | MS.gene047354:CDS | 35.0% | |
| ACCAAGACATATCTAATCCA+AGG | - | chr2.3:70355254-70355273 | MS.gene047354:intron | 35.0% | |
| ATAACATTTAGCGTGGTCAT+AGG | - | chr2.3:70355205-70355224 | MS.gene047354:intron | 35.0% | |
| ATGACCACGCTAAATGTTAT+CGG | + | chr2.3:70355205-70355224 | None:intergenic | 35.0% | |
| ATTGTTAAGATTTCCTCCAC+TGG | + | chr2.3:70355571-70355590 | None:intergenic | 35.0% | |
| CATGGTGTATTTACAAGAGA+TGG | - | chr2.3:70355703-70355722 | MS.gene047354:intron | 35.0% | |
| CCAAAAGATCCTTCAAAGAA+GGG | - | chr2.3:70355886-70355905 | MS.gene047354:CDS | 35.0% | |
| CTAAGATTACCCTTCTTTGA+AGG | + | chr2.3:70355898-70355917 | None:intergenic | 35.0% | |
| CTATGAAGAGGTTATTCCAA+AGG | - | chr2.3:70355849-70355868 | MS.gene047354:CDS | 35.0% | |
| CTTCAAAGAAGGGTAATCTT+AGG | - | chr2.3:70355896-70355915 | MS.gene047354:CDS | 35.0% | |
| GAAGTTCAACATCAATTCTC+TGG | - | chr2.3:70355461-70355480 | MS.gene047354:CDS | 35.0% | |
| GAGGACCAATTGACATAAAT+TGG | - | chr2.3:70354954-70354973 | MS.gene047354:intron | 35.0% | |
| GTTATTGATGAGAAACCACA+TGG | - | chr2.3:70355685-70355704 | MS.gene047354:CDS | 35.0% | |
| TACAAGAGATGGCAATGATT+TGG | - | chr2.3:70355714-70355733 | MS.gene047354:intron | 35.0% | |
| TATTCATCCAAGCTATGAAG+AGG | - | chr2.3:70355837-70355856 | MS.gene047354:CDS | 35.0% | |
| TCAATATCAAGTTTCCAGCT+AGG | - | chr2.3:70355926-70355945 | MS.gene047354:CDS | 35.0% | |
| TCCAAAAGATCCTTCAAAGA+AGG | - | chr2.3:70355885-70355904 | MS.gene047354:CDS | 35.0% | |
| TCTCTTGTAAATACACCATG+TGG | + | chr2.3:70355703-70355722 | None:intergenic | 35.0% | |
| TGTCTAGTAATAGAGTCCAT+AGG | - | chr2.3:70355096-70355115 | MS.gene047354:intron | 35.0% | |
| TTGAACACAAAACCTACCAA+AGG | + | chr2.3:70355372-70355391 | None:intergenic | 35.0% | |
| TTGACTTCTGAGCAGAAAAT+TGG | - | chr2.3:70355949-70355968 | MS.gene047354:CDS | 35.0% | |
| ! | AGGAGATTGATGAGTCTTTT+AGG | - | chr2.3:70354926-70354945 | MS.gene047354:intron | 35.0% |
| ! | GATTAGATATGTCTTGGTGT+TGG | + | chr2.3:70355252-70355271 | None:intergenic | 35.0% |
| ! | TCAGCGTCTTTCTTATTTGA+GGG | + | chr2.3:70354166-70354185 | None:intergenic | 35.0% |
| ! | TCCTTGGATTAGATATGTCT+TGG | + | chr2.3:70355258-70355277 | None:intergenic | 35.0% |
| ! | TGGGTCATAAGTTCCAATTT+TGG | - | chr2.3:70355481-70355500 | MS.gene047354:CDS | 35.0% |
| AAACATTCCACCAAAGGATC+TGG | + | chr2.3:70354593-70354612 | None:intergenic | 40.0% | |
| ACATTCTTCCAAAGTGGAGA+TGG | - | chr2.3:70354442-70354461 | MS.gene047354:CDS | 40.0% | |
| AGATCCTTTGGTGGAATGTT+TGG | - | chr2.3:70354592-70354611 | MS.gene047354:intron | 40.0% | |
| AGATCTGCTGGTATCACATT+TGG | + | chr2.3:70355658-70355677 | None:intergenic | 40.0% | |
| AGTCTTGAGGAGCTCTATAA+AGG | - | chr2.3:70354712-70354731 | MS.gene047354:intron | 40.0% | |
| ATCGAAAACTTGCCATGAAG+TGG | - | chr2.3:70354125-70354144 | MS.gene047354:CDS | 40.0% | |
| ATGGAGAAGAAGGGCTTAAA+GGG | - | chr2.3:70354383-70354402 | MS.gene047354:CDS | 40.0% | |
| CACAGAAGAAGAGTTGAAGA+AGG | - | chr2.3:70354099-70354118 | MS.gene047354:CDS | 40.0% | |
| CTCAAATAAGAAAGACGCTG+AGG | - | chr2.3:70354165-70354184 | MS.gene047354:CDS | 40.0% | |
| CTTCTTCAACTCTTCTTCTG+TGG | + | chr2.3:70354101-70354120 | None:intergenic | 40.0% | |
| GAAGAGGTTATTCCAAAGGA+AGG | - | chr2.3:70355853-70355872 | MS.gene047354:CDS | 40.0% | |
| GGAATAACCTCTTCATAGCT+TGG | + | chr2.3:70355847-70355866 | None:intergenic | 40.0% | |
| GTCTTGAGGAGCTCTATAAA+GGG | - | chr2.3:70354713-70354732 | MS.gene047354:intron | 40.0% | |
| GTTGCTCATTTCCTTTCTCA+GGG | + | chr2.3:70355636-70355655 | None:intergenic | 40.0% | |
| TATGGAGAAGAAGGGCTTAA+AGG | - | chr2.3:70354382-70354401 | MS.gene047354:CDS | 40.0% | |
| ! | AGAGATATCTGAAGCCTATG+AGG | - | chr2.3:70354198-70354217 | MS.gene047354:CDS | 40.0% |
| ! | CAATCTGGTTCAGTATGGTA+GGG | - | chr2.3:70355331-70355350 | MS.gene047354:CDS | 40.0% |
| ! | CAGTTCAATCTGGTTCAGTA+TGG | - | chr2.3:70355326-70355345 | MS.gene047354:CDS | 40.0% |
| ! | CTCAGCGTCTTTCTTATTTG+AGG | + | chr2.3:70354167-70354186 | None:intergenic | 40.0% |
| ! | TAGATTGCCTTGTAGTCTTG+AGG | - | chr2.3:70354699-70354718 | MS.gene047354:intron | 40.0% |
| ! | TCAATCTGGTTCAGTATGGT+AGG | - | chr2.3:70355330-70355349 | MS.gene047354:CDS | 40.0% |
| ! | TCACTAGCAGAAGCTTTAAC+AGG | - | chr2.3:70355754-70355773 | MS.gene047354:intron | 40.0% |
| !! | ACGCATTGGTTTGGTTGATT+CGG | - | chr2.3:70355391-70355410 | MS.gene047354:CDS | 40.0% |
| !! | AGGTTTTGTGTTCAACGCAT+TGG | - | chr2.3:70355377-70355396 | MS.gene047354:CDS | 40.0% |
| !! | CCCTTCTTTGAAGGATCTTT+TGG | + | chr2.3:70355889-70355908 | None:intergenic | 40.0% |
| !! | TTGTGTTCAACGCATTGGTT+TGG | - | chr2.3:70355382-70355401 | MS.gene047354:CDS | 40.0% |
| AAGACAACGAGTCCTTTGGT+AGG | - | chr2.3:70355357-70355376 | MS.gene047354:CDS | 45.0% | |
| ACCACCAAACATTCCACCAA+AGG | + | chr2.3:70354599-70354618 | None:intergenic | 45.0% | |
| AGGGAAATTGCTGATGCAAG+TGG | - | chr2.3:70354760-70354779 | MS.gene047354:intron | 45.0% | |
| AGTCAAACCAGGGTGGAAAA+AGG | - | chr2.3:70355594-70355613 | MS.gene047354:CDS | 45.0% | |
| CAATTGAAGTCAAACCAGGG+TGG | - | chr2.3:70355587-70355606 | MS.gene047354:CDS | 45.0% | |
| GACACCGATAACATTTAGCG+TGG | - | chr2.3:70355198-70355217 | MS.gene047354:intron | 45.0% | |
| GACTAAGACAACGAGTCCTT+TGG | - | chr2.3:70355353-70355372 | MS.gene047354:CDS | 45.0% | |
| GGAATAGGCATACCTTCCTT+TGG | + | chr2.3:70355868-70355887 | None:intergenic | 45.0% | |
| GGATTGAACCTAAACGTCGT+TGG | + | chr2.3:70354469-70354488 | None:intergenic | 45.0% | |
| GGGAAATTGCTGATGCAAGT+GGG | - | chr2.3:70354761-70354780 | MS.gene047354:intron | 45.0% | |
| GGTTGCTCATTTCCTTTCTC+AGG | + | chr2.3:70355637-70355656 | None:intergenic | 45.0% | |
| GTCAAACCAGGGTGGAAAAA+GGG | - | chr2.3:70355595-70355614 | MS.gene047354:CDS | 45.0% | |
| TAGAGCTCCTCAAGACTACA+AGG | + | chr2.3:70354709-70354728 | None:intergenic | 45.0% | |
| TATGAAACACGGACACTCCT+TGG | + | chr2.3:70355274-70355293 | None:intergenic | 45.0% | |
| TCCTTTGGTGGAATGTTTGG+TGG | - | chr2.3:70354595-70354614 | MS.gene047354:intron | 45.0% | |
| TTGCAGGAAAACTATGCCAG+TGG | - | chr2.3:70355552-70355571 | MS.gene047354:CDS | 45.0% | |
| ! | TTTGTTCCCTTTTTCCACCC+TGG | + | chr2.3:70355604-70355623 | None:intergenic | 45.0% |
| !! | TTGGTTTGGTTGATTCGGTC+CGG | - | chr2.3:70355396-70355415 | MS.gene047354:CDS | 45.0% |
| ATTCCTCCCATTCCCCCAAA+CGG | + | chr2.3:70354538-70354557 | None:intergenic | 50.0% | |
| CACTGTTCGTCTCACAACAC+TGG | - | chr2.3:70355780-70355799 | MS.gene047354:intron | 50.0% | |
| CAGGAAAACTATGCCAGTGG+AGG | - | chr2.3:70355555-70355574 | MS.gene047354:CDS | 50.0% | |
| GAGATGGACCAACGACGTTT+AGG | - | chr2.3:70354458-70354477 | MS.gene047354:CDS | 50.0% | |
| GGGGCTACATTCTTCCAAAG+TGG | - | chr2.3:70354436-70354455 | MS.gene047354:CDS | 50.0% | |
| GTTCGTCTCACAACACTGGA+TGG | - | chr2.3:70355784-70355803 | MS.gene047354:intron | 50.0% | |
| TCGGGTATTCAAGCCCGTTT+GGG | - | chr2.3:70354521-70354540 | MS.gene047354:intron | 50.0% | |
| TCGTTGGTCCATCTCCACTT+TGG | + | chr2.3:70354453-70354472 | None:intergenic | 50.0% | |
| TCTCACAACACTGGATGGCA+GGG | - | chr2.3:70355789-70355808 | MS.gene047354:intron | 50.0% | |
| TGCTCAGAAGTCAACCTAGC+TGG | + | chr2.3:70355943-70355962 | None:intergenic | 50.0% | |
| TTCGGGTATTCAAGCCCGTT+TGG | - | chr2.3:70354520-70354539 | MS.gene047354:intron | 50.0% | |
| TTTGGGGGAATGGGAGGAAT+GGG | - | chr2.3:70354538-70354557 | MS.gene047354:intron | 50.0% | |
| !! | CTTATCAGGGTGCCACTTCA+TGG | + | chr2.3:70354140-70354159 | None:intergenic | 50.0% |
| !! | TCTTGGTGTTGGACACGCAT+CGG | + | chr2.3:70355241-70355260 | None:intergenic | 50.0% |
| ACCTCAAGATGCTTCTGGCG+GGG | - | chr2.3:70354417-70354436 | MS.gene047354:CDS | 55.0% | |
| AGAGGTGGAGCCAGATCCTT+TGG | - | chr2.3:70354580-70354599 | MS.gene047354:intron | 55.0% | |
| CACCTCAAGATGCTTCTGGC+GGG | - | chr2.3:70354416-70354435 | MS.gene047354:CDS | 55.0% | |
| CCACCACCTCAAGATGCTTC+TGG | - | chr2.3:70354412-70354431 | MS.gene047354:CDS | 55.0% | |
| CCACCTCAAGATGCTTCTGG+CGG | - | chr2.3:70354415-70354434 | MS.gene047354:CDS | 55.0% | |
| CGGGTATTCAAGCCCGTTTG+GGG | - | chr2.3:70354522-70354541 | MS.gene047354:intron | 55.0% | |
| GCTGGTGGGAATGGAATGAG+AGG | - | chr2.3:70354562-70354581 | MS.gene047354:intron | 55.0% | |
| GGGTATTCAAGCCCGTTTGG+GGG | - | chr2.3:70354523-70354542 | MS.gene047354:intron | 55.0% | |
| GGTGGGAATGGAATGAGAGG+TGG | - | chr2.3:70354565-70354584 | MS.gene047354:intron | 55.0% | |
| GTCTCACAACACTGGATGGC+AGG | - | chr2.3:70355788-70355807 | MS.gene047354:intron | 55.0% | |
| GTTTGGGGGAATGGGAGGAA+TGG | - | chr2.3:70354537-70354556 | MS.gene047354:intron | 55.0% | |
| TCAAGCCCGTTTGGGGGAAT+GGG | - | chr2.3:70354529-70354548 | MS.gene047354:intron | 55.0% | |
| TCAATAGCAGCTGCCTTGCG+AGG | + | chr2.3:70354676-70354695 | None:intergenic | 55.0% | |
| TTCAAGCCCGTTTGGGGGAA+TGG | - | chr2.3:70354528-70354547 | MS.gene047354:intron | 55.0% | |
| TTCCTCCCATTCCCCCAAAC+GGG | + | chr2.3:70354537-70354556 | None:intergenic | 55.0% | |
| TTGGGGGAATGGGAGGAATG+GGG | - | chr2.3:70354539-70354558 | MS.gene047354:intron | 55.0% | |
| !! | CCAGAAGCATCTTGAGGTGG+TGG | + | chr2.3:70354415-70354434 | None:intergenic | 55.0% |
| CGAGGACCTTGCTGACGCAT+AGG | + | chr2.3:70354658-70354677 | None:intergenic | 60.0% | |
| GCTAGGCCTATGCGTCAGCA+AGG | - | chr2.3:70354649-70354668 | MS.gene047354:intron | 60.0% | |
| GGTGGAGCCAGATCCTTTGG+TGG | - | chr2.3:70354583-70354602 | MS.gene047354:intron | 60.0% | |
| TGGGGGAATGGGAGGAATGG+GGG | - | chr2.3:70354540-70354559 | MS.gene047354:intron | 60.0% | |
| !! | CCGCCAGAAGCATCTTGAGG+TGG | + | chr2.3:70354418-70354437 | None:intergenic | 60.0% |
| AGCCCGTTTGGGGGAATGGG+AGG | - | chr2.3:70354532-70354551 | MS.gene047354:intron | 65.0% | |
| ATGGGAGGAATGGGGGCTGG+TGG | - | chr2.3:70354547-70354566 | MS.gene047354:intron | 65.0% | |
| GCGTCAGCAAGGTCCTCGCA+AGG | - | chr2.3:70354660-70354679 | MS.gene047354:intron | 65.0% | |
| GGAATGGGAGGAATGGGGGC+TGG | - | chr2.3:70354544-70354563 | MS.gene047354:intron | 65.0% | |
| ! | GGAATGGGGGCTGGTGGGAA+TGG | - | chr2.3:70354553-70354572 | MS.gene047354:intron | 65.0% |
| ! | TGGGAGGAATGGGGGCTGGT+GGG | - | chr2.3:70354548-70354567 | MS.gene047354:intron | 65.0% |
| !! | GCCCCGCCAGAAGCATCTTG+AGG | + | chr2.3:70354421-70354440 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 70354055 | 70355996 | 70354055 | ID=MS.gene047354 |
| chr2.3 | mRNA | 70354055 | 70355996 | 70354055 | ID=MS.gene047354.t1;Parent=MS.gene047354 |
| chr2.3 | exon | 70355832 | 70355996 | 70355832 | ID=MS.gene047354.t1.exon1;Parent=MS.gene047354.t1 |
| chr2.3 | CDS | 70355832 | 70355996 | 70355832 | ID=cds.MS.gene047354.t1;Parent=MS.gene047354.t1 |
| chr2.3 | exon | 70355269 | 70355708 | 70355269 | ID=MS.gene047354.t1.exon2;Parent=MS.gene047354.t1 |
| chr2.3 | CDS | 70355269 | 70355708 | 70355269 | ID=cds.MS.gene047354.t1;Parent=MS.gene047354.t1 |
| chr2.3 | exon | 70354055 | 70354493 | 70354055 | ID=MS.gene047354.t1.exon3;Parent=MS.gene047354.t1 |
| chr2.3 | CDS | 70354055 | 70354493 | 70354055 | ID=cds.MS.gene047354.t1;Parent=MS.gene047354.t1 |
| Gene Sequence |
| Protein sequence |
