Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73883.t1 | RHN61833.1 | 96.2 | 291 | 11 | 0 | 1 | 291 | 488 | 778 | 6.40E-153 | 550.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73883.t1 | G7JV08 | 96.2 | 291 | 11 | 0 | 1 | 291 | 474 | 764 | 4.6e-153 | 550.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene73883 | 0.830869 | 2.30E-55 | -1.69E-46 |
| MS.gene04918 | MS.gene73883 | 0.860848 | 1.55E-63 | -1.69E-46 |
| MS.gene04919 | MS.gene73883 | 0.809776 | 1.60E-50 | -1.69E-46 |
| MS.gene04920 | MS.gene73883 | 0.841246 | 5.34E-58 | -1.69E-46 |
| MS.gene049283 | MS.gene73883 | 0.812452 | 4.21E-51 | -1.69E-46 |
| MS.gene049343 | MS.gene73883 | 0.819107 | 1.38E-52 | -1.69E-46 |
| MS.gene049368 | MS.gene73883 | 0.832276 | 1.04E-55 | -1.69E-46 |
| MS.gene049411 | MS.gene73883 | 0.855781 | 5.01E-62 | -1.69E-46 |
| MS.gene049499 | MS.gene73883 | 0.817062 | 4.01E-52 | -1.69E-46 |
| MS.gene049680 | MS.gene73883 | 0.858598 | 7.38E-63 | -1.69E-46 |
| MS.gene049983 | MS.gene73883 | 0.833405 | 5.43E-56 | -1.69E-46 |
| MS.gene050352 | MS.gene73883 | 0.811189 | 7.93E-51 | -1.69E-46 |
| MS.gene050646 | MS.gene73883 | 0.807109 | 5.93E-50 | -1.69E-46 |
| MS.gene050689 | MS.gene73883 | 0.858207 | 9.66E-63 | -1.69E-46 |
| MS.gene050752 | MS.gene73883 | 0.823956 | 1.05E-53 | -1.69E-46 |
| MS.gene050838 | MS.gene73883 | 0.804176 | 2.45E-49 | -1.69E-46 |
| MS.gene050945 | MS.gene73883 | 0.822778 | 1.97E-53 | -1.69E-46 |
| MS.gene050955 | MS.gene73883 | 0.826992 | 2.00E-54 | -1.69E-46 |
| MS.gene051003 | MS.gene73883 | 0.87279 | 2.43E-67 | -1.69E-46 |
| MS.gene051234 | MS.gene73883 | 0.859006 | 5.57E-63 | -1.69E-46 |
| MS.gene051343 | MS.gene73883 | 0.830132 | 3.49E-55 | -1.69E-46 |
| MS.gene051363 | MS.gene73883 | 0.851888 | 6.62E-61 | -1.69E-46 |
| MS.gene051365 | MS.gene73883 | 0.844103 | 9.30E-59 | -1.69E-46 |
| MS.gene05188 | MS.gene73883 | 0.832897 | 7.27E-56 | -1.69E-46 |
| MS.gene051902 | MS.gene73883 | 0.829861 | 4.06E-55 | -1.69E-46 |
| MS.gene051975 | MS.gene73883 | 0.861197 | 1.22E-63 | -1.69E-46 |
| MS.gene052072 | MS.gene73883 | 0.832121 | 1.13E-55 | -1.69E-46 |
| MS.gene052307 | MS.gene73883 | 0.801226 | 9.95E-49 | -1.69E-46 |
| MS.gene052335 | MS.gene73883 | 0.812047 | 5.16E-51 | -1.69E-46 |
| MS.gene052463 | MS.gene73883 | 0.823734 | 1.18E-53 | -1.69E-46 |
| MS.gene052516 | MS.gene73883 | 0.825987 | 3.47E-54 | -1.69E-46 |
| MS.gene052518 | MS.gene73883 | 0.85182 | 6.92E-61 | -1.69E-46 |
| MS.gene052519 | MS.gene73883 | 0.835445 | 1.67E-56 | -1.69E-46 |
| MS.gene052533 | MS.gene73883 | 0.812201 | 4.78E-51 | -1.69E-46 |
| MS.gene053058 | MS.gene73883 | 0.822657 | 2.11E-53 | -1.69E-46 |
| MS.gene053122 | MS.gene73883 | 0.810073 | 1.38E-50 | -1.69E-46 |
| MS.gene053146 | MS.gene73883 | 0.809831 | 1.56E-50 | -1.69E-46 |
| MS.gene053226 | MS.gene73883 | 0.838436 | 2.88E-57 | -1.69E-46 |
| MS.gene053272 | MS.gene73883 | -0.822088 | 2.86E-53 | -1.69E-46 |
| MS.gene053298 | MS.gene73883 | 0.802581 | 5.24E-49 | -1.69E-46 |
| MS.gene05364 | MS.gene73883 | 0.8164 | 5.64E-52 | -1.69E-46 |
| MS.gene053931 | MS.gene73883 | 0.815938 | 7.15E-52 | -1.69E-46 |
| MS.gene054004 | MS.gene73883 | 0.838341 | 3.05E-57 | -1.69E-46 |
| MS.gene054005 | MS.gene73883 | 0.800599 | 1.34E-48 | -1.69E-46 |
| MS.gene054142 | MS.gene73883 | 0.836636 | 8.33E-57 | -1.69E-46 |
| MS.gene054403 | MS.gene73883 | 0.826451 | 2.69E-54 | -1.69E-46 |
| MS.gene054582 | MS.gene73883 | 0.805091 | 1.58E-49 | -1.69E-46 |
| MS.gene05458 | MS.gene73883 | 0.826871 | 2.14E-54 | -1.69E-46 |
| MS.gene054651 | MS.gene73883 | 0.843258 | 1.56E-58 | -1.69E-46 |
| MS.gene05469 | MS.gene73883 | 0.817785 | 2.75E-52 | -1.69E-46 |
| MS.gene054709 | MS.gene73883 | 0.800579 | 1.35E-48 | -1.69E-46 |
| MS.gene05517 | MS.gene73883 | 0.831948 | 1.25E-55 | -1.69E-46 |
| MS.gene055513 | MS.gene73883 | 0.857665 | 1.40E-62 | -1.69E-46 |
| MS.gene055555 | MS.gene73883 | 0.818638 | 1.77E-52 | -1.69E-46 |
| MS.gene055765 | MS.gene73883 | 0.800197 | 1.61E-48 | -1.69E-46 |
| MS.gene055841 | MS.gene73883 | 0.823914 | 1.07E-53 | -1.69E-46 |
| MS.gene056010 | MS.gene73883 | 0.804105 | 2.53E-49 | -1.69E-46 |
| MS.gene056215 | MS.gene73883 | 0.830051 | 3.65E-55 | -1.69E-46 |
| MS.gene056699 | MS.gene73883 | 0.840973 | 6.30E-58 | -1.69E-46 |
| MS.gene05686 | MS.gene73883 | 0.812641 | 3.83E-51 | -1.69E-46 |
| MS.gene05690 | MS.gene73883 | 0.812661 | 3.79E-51 | -1.69E-46 |
| MS.gene056986 | MS.gene73883 | 0.854243 | 1.40E-61 | -1.69E-46 |
| MS.gene057034 | MS.gene73883 | 0.816622 | 5.03E-52 | -1.69E-46 |
| MS.gene057102 | MS.gene73883 | 0.887252 | 1.68E-72 | -1.69E-46 |
| MS.gene057208 | MS.gene73883 | 0.854631 | 1.08E-61 | -1.69E-46 |
| MS.gene057694 | MS.gene73883 | 0.816213 | 6.21E-52 | -1.69E-46 |
| MS.gene057705 | MS.gene73883 | 0.826028 | 3.40E-54 | -1.69E-46 |
| MS.gene05781 | MS.gene73883 | 0.8012 | 1.01E-48 | -1.69E-46 |
| MS.gene058008 | MS.gene73883 | 0.839301 | 1.72E-57 | -1.69E-46 |
| MS.gene058009 | MS.gene73883 | 0.830245 | 3.27E-55 | -1.69E-46 |
| MS.gene058149 | MS.gene73883 | 0.807728 | 4.39E-50 | -1.69E-46 |
| MS.gene058781 | MS.gene73883 | 0.858316 | 8.96E-63 | -1.69E-46 |
| MS.gene058783 | MS.gene73883 | 0.876729 | 1.11E-68 | -1.69E-46 |
| MS.gene059146 | MS.gene73883 | 0.87188 | 4.88E-67 | -1.69E-46 |
| MS.gene059454 | MS.gene73883 | 0.805557 | 1.26E-49 | -1.69E-46 |
| MS.gene059778 | MS.gene73883 | 0.818142 | 2.29E-52 | -1.69E-46 |
| MS.gene059842 | MS.gene73883 | 0.811463 | 6.91E-51 | -1.69E-46 |
| MS.gene05985 | MS.gene73883 | -0.882206 | 1.27E-70 | -1.69E-46 |
| MS.gene059901 | MS.gene73883 | -0.842436 | 2.59E-58 | -1.69E-46 |
| MS.gene059935 | MS.gene73883 | 0.807107 | 5.94E-50 | -1.69E-46 |
| MS.gene06011 | MS.gene73883 | 0.815029 | 1.14E-51 | -1.69E-46 |
| MS.gene060244 | MS.gene73883 | 0.822411 | 2.40E-53 | -1.69E-46 |
| MS.gene060338 | MS.gene73883 | 0.849102 | 4.01E-60 | -1.69E-46 |
| MS.gene060365 | MS.gene73883 | 0.815935 | 7.16E-52 | -1.69E-46 |
| MS.gene060763 | MS.gene73883 | 0.834393 | 3.08E-56 | -1.69E-46 |
| MS.gene060933 | MS.gene73883 | 0.803362 | 3.61E-49 | -1.69E-46 |
| MS.gene060935 | MS.gene73883 | 0.885301 | 9.15E-72 | -1.69E-46 |
| MS.gene060937 | MS.gene73883 | 0.879297 | 1.40E-69 | -1.69E-46 |
| MS.gene061100 | MS.gene73883 | 0.844143 | 9.07E-59 | -1.69E-46 |
| MS.gene061160 | MS.gene73883 | 0.810023 | 1.42E-50 | -1.69E-46 |
| MS.gene061188 | MS.gene73883 | 0.814281 | 1.67E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73883.t1 | MTR_4g079510 | 96.220 | 291 | 11 | 0 | 1 | 291 | 474 | 764 | 0.0 | 582 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73883.t1 | AT3G58110 | 41.751 | 297 | 156 | 9 | 2 | 291 | 465 | 751 | 5.81e-61 | 206 |
| MS.gene73883.t1 | AT3G58110 | 41.751 | 297 | 156 | 9 | 2 | 291 | 495 | 781 | 6.73e-61 | 206 |
| MS.gene73883.t1 | AT2G42370 | 40.977 | 266 | 149 | 5 | 6 | 270 | 443 | 701 | 7.37e-58 | 197 |
Find 69 sgRNAs with CRISPR-Local
Find 78 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACGCTTGTTGCTGCCATTT+AGG | 0.183848 | 4.2:-30632549 | None:intergenic |
| CAATATCTTTACAGTTCTTT+TGG | 0.200628 | 4.2:-30633047 | None:intergenic |
| GCAGCTTCTGCTTCACTTAC+TGG | 0.206646 | 4.2:-30633231 | None:intergenic |
| ACGCTTGTTGCTGCCATTTA+GGG | 0.245951 | 4.2:-30632548 | None:intergenic |
| TACAAGGATGTTCCTGGATC+TGG | 0.260398 | 4.2:+30632931 | MS.gene73883:CDS |
| AACTCTCACCATACCCTAAA+TGG | 0.273884 | 4.2:+30632535 | MS.gene73883:CDS |
| CAATCTTTGCTTTATGCAAA+TGG | 0.314284 | 4.2:-30632753 | None:intergenic |
| ATCCTTGGGTGACAAGTTGC+AGG | 0.333008 | 4.2:+30633125 | MS.gene73883:CDS |
| GAAGCAGTGCAGATGCCTTT+TGG | 0.347443 | 4.2:+30632385 | MS.gene73883:CDS |
| ACAAGGATGTTCCTGGATCT+GGG | 0.360505 | 4.2:+30632932 | MS.gene73883:CDS |
| CCACTTTACAAGGATGTTCC+TGG | 0.370467 | 4.2:+30632925 | MS.gene73883:CDS |
| CGACAAAGTAAAACATTTGA+AGG | 0.384383 | 4.2:+30633155 | MS.gene73883:CDS |
| GGAACAGATGCAACATTTCA+TGG | 0.394956 | 4.2:+30632624 | MS.gene73883:CDS |
| GTGTTTCTTTCAAAGCATTT+CGG | 0.425904 | 4.2:-30632855 | None:intergenic |
| TTTCCTCTTCTTCCTTCCTC+AGG | 0.427992 | 4.2:-30632993 | None:intergenic |
| AATCTTTGCTTTATGCAAAT+GGG | 0.444722 | 4.2:-30632752 | None:intergenic |
| AAACACAGATGGAGGTATAT+CGG | 0.445628 | 4.2:+30632788 | MS.gene73883:CDS |
| GATGATCCTCAGATGATTCA+TGG | 0.446049 | 4.2:+30632460 | MS.gene73883:CDS |
| GATGTATGCATCAAAAGATC+AGG | 0.477067 | 4.2:+30632660 | MS.gene73883:CDS |
| ATGCATCCTTCGAAGTCCAT+TGG | 0.486850 | 4.2:-30632601 | None:intergenic |
| GAGCACATTCAACTGATTCA+AGG | 0.492428 | 4.2:-30633209 | None:intergenic |
| GCTACAGAGGAGAGATGAAA+TGG | 0.498927 | 4.2:+30632726 | MS.gene73883:CDS |
| TAGGAGATTTCCTCTCTGCT+AGG | 0.500380 | 4.2:+30632437 | MS.gene73883:CDS |
| GAGTGTGATGGATCTGGAAA+AGG | 0.500881 | 4.2:+30632966 | MS.gene73883:CDS |
| AAAGAACTGTAAAGATATTG+AGG | 0.501243 | 4.2:+30633050 | MS.gene73883:CDS |
| AGCTGATGAGCCACTTTACA+AGG | 0.501688 | 4.2:+30632915 | MS.gene73883:CDS |
| TTGAAGGAAGTGAATGCAAA+AGG | 0.505591 | 4.2:+30633171 | MS.gene73883:CDS |
| TCTAAGCAGAGTTGAATCCT+TGG | 0.512561 | 4.2:+30633110 | MS.gene73883:CDS |
| CAAGGATGTTCCTGGATCTG+GGG | 0.516329 | 4.2:+30632933 | MS.gene73883:CDS |
| TGAGGAAGAGTGGCTTGGCC+AGG | 0.516986 | 4.2:+30633068 | MS.gene73883:CDS |
| CTAAGCAGAGTTGAATCCTT+GGG | 0.518875 | 4.2:+30633111 | MS.gene73883:CDS |
| AACATTTCATGGAGAAAGCT+AGG | 0.521784 | 4.2:+30632635 | MS.gene73883:CDS |
| TGTTGCTGCCATTTAGGGTA+TGG | 0.530516 | 4.2:-30632543 | None:intergenic |
| CATCTTCATGATAGCTCGGT+AGG | 0.547568 | 4.2:+30632418 | MS.gene73883:CDS |
| AAGGATGTTCCTGGATCTGG+GGG | 0.550583 | 4.2:+30632934 | MS.gene73883:CDS |
| CCAGGAACATCCTTGTAAAG+TGG | 0.554028 | 4.2:-30632925 | None:intergenic |
| AGCACATTCAACTGATTCAA+GGG | 0.558315 | 4.2:-30633208 | None:intergenic |
| AGATGAATCCCAGAACCAAA+AGG | 0.567276 | 4.2:-30632400 | None:intergenic |
| TCACAAGAGAGACATTGGTC+TGG | 0.567667 | 4.2:+30632504 | MS.gene73883:CDS |
| TTATATGATGCAAAGCCTTG+TGG | 0.568831 | 4.2:+30632825 | MS.gene73883:CDS |
| AGGAGATTTCCTCTCTGCTA+GGG | 0.569856 | 4.2:+30632438 | MS.gene73883:CDS |
| CCCATGGAGTTCTCAACCAA+TGG | 0.572312 | 4.2:+30632585 | MS.gene73883:CDS |
| GGAAAAGGAACGCCTGAGGA+AGG | 0.573524 | 4.2:+30632981 | MS.gene73883:CDS |
| AATGGACTTCGAAGGATGCA+TGG | 0.578842 | 4.2:+30632603 | MS.gene73883:CDS |
| TCCATTGGTTGAGAACTCCA+TGG | 0.588271 | 4.2:-30632586 | None:intergenic |
| GTAAAGATATTGAGGAAGAG+TGG | 0.590006 | 4.2:+30633058 | MS.gene73883:CDS |
| ACGCCTGAGGAAGGAAGAAG+AGG | 0.591628 | 4.2:+30632990 | MS.gene73883:CDS |
| CCAGACTCATAAAACACAGA+TGG | 0.591662 | 4.2:+30632777 | MS.gene73883:CDS |
| GGAAGAGTGGCTTGGCCAGG+TGG | 0.592271 | 4.2:+30633071 | MS.gene73883:CDS |
| GATTCATCTTCATGATAGCT+CGG | 0.592328 | 4.2:+30632414 | MS.gene73883:CDS |
| GATATTGAGGAAGAGTGGCT+TGG | 0.593907 | 4.2:+30633063 | MS.gene73883:CDS |
| AATGGTCACAAGAGAGACAT+TGG | 0.603182 | 4.2:+30632499 | MS.gene73883:CDS |
| CCATTGGTTGAGAACTCCAT+GGG | 0.610206 | 4.2:-30632585 | None:intergenic |
| GGAGGTATATCGGCTTGAGA+AGG | 0.615618 | 4.2:+30632798 | MS.gene73883:CDS |
| AGCCTGCAACTTGTCACCCA+AGG | 0.621091 | 4.2:-30633127 | None:intergenic |
| TAAAGTGGCTCATCAGCTTG+CGG | 0.624765 | 4.2:-30632910 | None:intergenic |
| GACTCATAAAACACAGATGG+AGG | 0.627538 | 4.2:+30632780 | MS.gene73883:CDS |
| GAAGAGTGGCTTGGCCAGGT+GGG | 0.628195 | 4.2:+30633072 | MS.gene73883:CDS |
| GATCCATCACACTCAAAACA+AGG | 0.636976 | 4.2:-30632957 | None:intergenic |
| TGAGGAAGGAAGAAGAGGAA+AGG | 0.640038 | 4.2:+30632995 | MS.gene73883:CDS |
| TCTCAACCAATGGACTTCGA+AGG | 0.640505 | 4.2:+30632595 | MS.gene73883:CDS |
| ATGATGCAAAGCCTTGTGGA+AGG | 0.642131 | 4.2:+30632829 | MS.gene73883:CDS |
| CATTTCGGTAGCCTTCCACA+AGG | 0.644036 | 4.2:-30632840 | None:intergenic |
| GACGAGCCATGAATCATCTG+AGG | 0.654353 | 4.2:-30632466 | None:intergenic |
| GCACATTCAACTGATTCAAG+GGG | 0.659949 | 4.2:-30633207 | None:intergenic |
| GTTTGAGAAGTGATAGCCCA+TGG | 0.662824 | 4.2:+30632569 | MS.gene73883:CDS |
| GTTCATTCAGTATACCCACC+TGG | 0.671321 | 4.2:-30633086 | None:intergenic |
| ATCTGGAAAAGGAACGCCTG+AGG | 0.684579 | 4.2:+30632977 | MS.gene73883:CDS |
| GAGGATCATCCCTAGCAGAG+AGG | 0.708652 | 4.2:-30632447 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AAAGAACTGTAAAGATATTG+AGG | + | chr4.2:30633050-30633069 | MS.gene73883:CDS | 25.0% |
| ! | AATCTTTGCTTTATGCAAAT+GGG | - | chr4.2:30632755-30632774 | None:intergenic | 25.0% |
| !! | CAATATCTTTACAGTTCTTT+TGG | - | chr4.2:30633050-30633069 | None:intergenic | 25.0% |
| CAATCTTTGCTTTATGCAAA+TGG | - | chr4.2:30632756-30632775 | None:intergenic | 30.0% | |
| CGACAAAGTAAAACATTTGA+AGG | + | chr4.2:30633155-30633174 | MS.gene73883:CDS | 30.0% | |
| ! | GTGTTTCTTTCAAAGCATTT+CGG | - | chr4.2:30632858-30632877 | None:intergenic | 30.0% |
| AACATTTCATGGAGAAAGCT+AGG | + | chr4.2:30632635-30632654 | MS.gene73883:CDS | 35.0% | |
| GATGTATGCATCAAAAGATC+AGG | + | chr4.2:30632660-30632679 | MS.gene73883:CDS | 35.0% | |
| GATTCATCTTCATGATAGCT+CGG | + | chr4.2:30632414-30632433 | MS.gene73883:CDS | 35.0% | |
| GTAAAGATATTGAGGAAGAG+TGG | + | chr4.2:30633058-30633077 | MS.gene73883:CDS | 35.0% | |
| TTATATGATGCAAAGCCTTG+TGG | + | chr4.2:30632825-30632844 | MS.gene73883:CDS | 35.0% | |
| TTGAAGGAAGTGAATGCAAA+AGG | + | chr4.2:30633171-30633190 | MS.gene73883:CDS | 35.0% | |
| ! | AAACACAGATGGAGGTATAT+CGG | + | chr4.2:30632788-30632807 | MS.gene73883:CDS | 35.0% |
| ! | AGCACATTCAACTGATTCAA+GGG | - | chr4.2:30633211-30633230 | None:intergenic | 35.0% |
| ! | TTTTGCTTAATGAGCTACAG+AGG | + | chr4.2:30632713-30632732 | MS.gene73883:CDS | 35.0% |
| AACTCTCACCATACCCTAAA+TGG | + | chr4.2:30632535-30632554 | MS.gene73883:CDS | 40.0% | |
| AATGGTCACAAGAGAGACAT+TGG | + | chr4.2:30632499-30632518 | MS.gene73883:CDS | 40.0% | |
| AGATGAATCCCAGAACCAAA+AGG | - | chr4.2:30632403-30632422 | None:intergenic | 40.0% | |
| CCAGACTCATAAAACACAGA+TGG | + | chr4.2:30632777-30632796 | MS.gene73883:CDS | 40.0% | |
| CTAAGCAGAGTTGAATCCTT+GGG | + | chr4.2:30633111-30633130 | MS.gene73883:CDS | 40.0% | |
| GACTCATAAAACACAGATGG+AGG | + | chr4.2:30632780-30632799 | MS.gene73883:CDS | 40.0% | |
| GATCCATCACACTCAAAACA+AGG | - | chr4.2:30632960-30632979 | None:intergenic | 40.0% | |
| GATGATCCTCAGATGATTCA+TGG | + | chr4.2:30632460-30632479 | MS.gene73883:CDS | 40.0% | |
| GGAACAGATGCAACATTTCA+TGG | + | chr4.2:30632624-30632643 | MS.gene73883:CDS | 40.0% | |
| TCTAAGCAGAGTTGAATCCT+TGG | + | chr4.2:30633110-30633129 | MS.gene73883:CDS | 40.0% | |
| ! | CCATCTGTGTTTTATGAGTC+TGG | - | chr4.2:30632780-30632799 | None:intergenic | 40.0% |
| ! | GAGCACATTCAACTGATTCA+AGG | - | chr4.2:30633212-30633231 | None:intergenic | 40.0% |
| ! | GCACATTCAACTGATTCAAG+GGG | - | chr4.2:30633210-30633229 | None:intergenic | 40.0% |
| !!! | ATTCATGGCTCGTCACTTTT+TGG | + | chr4.2:30632475-30632494 | MS.gene73883:CDS | 40.0% |
| !!! | TGTTTTGAGTGTGATGGATC+TGG | + | chr4.2:30632960-30632979 | MS.gene73883:CDS | 40.0% |
| ACAAGGATGTTCCTGGATCT+GGG | + | chr4.2:30632932-30632951 | MS.gene73883:CDS | 45.0% | |
| AGGAGATTTCCTCTCTGCTA+GGG | + | chr4.2:30632438-30632457 | MS.gene73883:CDS | 45.0% | |
| ATGCATCCTTCGAAGTCCAT+TGG | - | chr4.2:30632604-30632623 | None:intergenic | 45.0% | |
| CATCTTCATGATAGCTCGGT+AGG | + | chr4.2:30632418-30632437 | MS.gene73883:CDS | 45.0% | |
| CCACTTTACAAGGATGTTCC+TGG | + | chr4.2:30632925-30632944 | MS.gene73883:CDS | 45.0% | |
| CCAGGAACATCCTTGTAAAG+TGG | - | chr4.2:30632928-30632947 | None:intergenic | 45.0% | |
| GATATTGAGGAAGAGTGGCT+TGG | + | chr4.2:30633063-30633082 | MS.gene73883:CDS | 45.0% | |
| GCTACAGAGGAGAGATGAAA+TGG | + | chr4.2:30632726-30632745 | MS.gene73883:CDS | 45.0% | |
| GTTCATTCAGTATACCCACC+TGG | - | chr4.2:30633089-30633108 | None:intergenic | 45.0% | |
| GTTTGAGAAGTGATAGCCCA+TGG | + | chr4.2:30632569-30632588 | MS.gene73883:CDS | 45.0% | |
| TAAAGTGGCTCATCAGCTTG+CGG | - | chr4.2:30632913-30632932 | None:intergenic | 45.0% | |
| TACAAGGATGTTCCTGGATC+TGG | + | chr4.2:30632931-30632950 | MS.gene73883:CDS | 45.0% | |
| TAGGAGATTTCCTCTCTGCT+AGG | + | chr4.2:30632437-30632456 | MS.gene73883:CDS | 45.0% | |
| TCACAAGAGAGACATTGGTC+TGG | + | chr4.2:30632504-30632523 | MS.gene73883:CDS | 45.0% | |
| TGAGGAAGGAAGAAGAGGAA+AGG | + | chr4.2:30632995-30633014 | MS.gene73883:CDS | 45.0% | |
| TTTCCTCTTCTTCCTTCCTC+AGG | - | chr4.2:30632996-30633015 | None:intergenic | 45.0% | |
| ! | AACGCTTGTTGCTGCCATTT+AGG | - | chr4.2:30632552-30632571 | None:intergenic | 45.0% |
| ! | AATGGACTTCGAAGGATGCA+TGG | + | chr4.2:30632603-30632622 | MS.gene73883:CDS | 45.0% |
| ! | ACGCTTGTTGCTGCCATTTA+GGG | - | chr4.2:30632551-30632570 | None:intergenic | 45.0% |
| ! | AGCTGATGAGCCACTTTACA+AGG | + | chr4.2:30632915-30632934 | MS.gene73883:CDS | 45.0% |
| ! | ATGATGCAAAGCCTTGTGGA+AGG | + | chr4.2:30632829-30632848 | MS.gene73883:CDS | 45.0% |
| ! | CCATTGGTTGAGAACTCCAT+GGG | - | chr4.2:30632588-30632607 | None:intergenic | 45.0% |
| ! | TCCATTGGTTGAGAACTCCA+TGG | - | chr4.2:30632589-30632608 | None:intergenic | 45.0% |
| ! | TCTCAACCAATGGACTTCGA+AGG | + | chr4.2:30632595-30632614 | MS.gene73883:CDS | 45.0% |
| ! | TGTTGCTGCCATTTAGGGTA+TGG | - | chr4.2:30632546-30632565 | None:intergenic | 45.0% |
| !! | GAGTGTGATGGATCTGGAAA+AGG | + | chr4.2:30632966-30632985 | MS.gene73883:CDS | 45.0% |
| !!! | GGCTCGTCACTTTTTGGTAA+TGG | + | chr4.2:30632481-30632500 | MS.gene73883:CDS | 45.0% |
| !!! | TGCAGATGCCTTTTGGTTCT+GGG | + | chr4.2:30632392-30632411 | MS.gene73883:CDS | 45.0% |
| AAGGATGTTCCTGGATCTGG+GGG | + | chr4.2:30632934-30632953 | MS.gene73883:CDS | 50.0% | |
| ATCCTTGGGTGACAAGTTGC+AGG | + | chr4.2:30633125-30633144 | MS.gene73883:CDS | 50.0% | |
| ATCTGGAAAAGGAACGCCTG+AGG | + | chr4.2:30632977-30632996 | MS.gene73883:CDS | 50.0% | |
| CAAGGATGTTCCTGGATCTG+GGG | + | chr4.2:30632933-30632952 | MS.gene73883:CDS | 50.0% | |
| CATTTCGGTAGCCTTCCACA+AGG | - | chr4.2:30632843-30632862 | None:intergenic | 50.0% | |
| CCCATGGAGTTCTCAACCAA+TGG | + | chr4.2:30632585-30632604 | MS.gene73883:CDS | 50.0% | |
| GACGAGCCATGAATCATCTG+AGG | - | chr4.2:30632469-30632488 | None:intergenic | 50.0% | |
| GCAGCTTCTGCTTCACTTAC+TGG | - | chr4.2:30633234-30633253 | None:intergenic | 50.0% | |
| ! | GAAGCAGTGCAGATGCCTTT+TGG | + | chr4.2:30632385-30632404 | MS.gene73883:CDS | 50.0% |
| !! | GGAGGTATATCGGCTTGAGA+AGG | + | chr4.2:30632798-30632817 | MS.gene73883:CDS | 50.0% |
| !!! | GGGCCTTGTTTTGAGTGTGA+TGG | + | chr4.2:30632954-30632973 | MS.gene73883:CDS | 50.0% |
| !!! | GTGCAGATGCCTTTTGGTTC+TGG | + | chr4.2:30632391-30632410 | MS.gene73883:CDS | 50.0% |
| AAAACAAGGCCCCCAGATCC+AGG | - | chr4.2:30632946-30632965 | None:intergenic | 55.0% | |
| ACGCCTGAGGAAGGAAGAAG+AGG | + | chr4.2:30632990-30633009 | MS.gene73883:CDS | 55.0% | |
| AGCCTGCAACTTGTCACCCA+AGG | - | chr4.2:30633130-30633149 | None:intergenic | 55.0% | |
| GAGGATCATCCCTAGCAGAG+AGG | - | chr4.2:30632450-30632469 | None:intergenic | 55.0% | |
| GGAAAAGGAACGCCTGAGGA+AGG | + | chr4.2:30632981-30633000 | MS.gene73883:CDS | 55.0% | |
| ! | GAAGAGTGGCTTGGCCAGGT+GGG | + | chr4.2:30633072-30633091 | MS.gene73883:CDS | 60.0% |
| ! | TGAGGAAGAGTGGCTTGGCC+AGG | + | chr4.2:30633068-30633087 | MS.gene73883:CDS | 60.0% |
| ! | GGAAGAGTGGCTTGGCCAGG+TGG | + | chr4.2:30633071-30633090 | MS.gene73883:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 30632382 | 30633257 | 30632382 | ID=MS.gene73883 |
| chr4.2 | mRNA | 30632382 | 30633257 | 30632382 | ID=MS.gene73883.t1;Parent=MS.gene73883 |
| chr4.2 | exon | 30632382 | 30633257 | 30632382 | ID=MS.gene73883.t1.exon1;Parent=MS.gene73883.t1 |
| chr4.2 | CDS | 30632382 | 30633257 | 30632382 | ID=cds.MS.gene73883.t1;Parent=MS.gene73883.t1 |
| Gene Sequence |
| Protein sequence |
