Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051701.t1 | XP_013448594.1 | 92.4 | 591 | 44 | 1 | 1 | 591 | 1 | 590 | 0.00E+00 | 1087 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051701.t1 | Q5XI31 | 25.6 | 528 | 367 | 13 | 53 | 568 | 26 | 539 | 3.5e-37 | 157.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051701.t1 | A0A072TZI8 | 92.4 | 591 | 44 | 1 | 1 | 591 | 1 | 590 | 0.0e+00 | 1087.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050689 | MS.gene051701 | 0.830044 | 3.67E-55 | -1.69E-46 |
| MS.gene051701 | MS.gene05364 | 0.822155 | 2.75E-53 | -1.69E-46 |
| MS.gene051701 | MS.gene05978 | 0.825763 | 3.93E-54 | -1.69E-46 |
| MS.gene051701 | MS.gene066566 | 0.810469 | 1.13E-50 | -1.69E-46 |
| MS.gene051701 | MS.gene067797 | 0.825106 | 5.62E-54 | -1.69E-46 |
| MS.gene051701 | MS.gene070787 | 0.801425 | 9.06E-49 | -1.69E-46 |
| MS.gene051701 | MS.gene08214 | 0.808793 | 2.60E-50 | -1.69E-46 |
| MS.gene051701 | MS.gene21651 | 0.808052 | 3.74E-50 | -1.69E-46 |
| MS.gene051701 | MS.gene22321 | 0.80707 | 6.05E-50 | -1.69E-46 |
| MS.gene051701 | MS.gene22740 | 0.817747 | 2.81E-52 | -1.69E-46 |
| MS.gene051701 | MS.gene23698 | 0.938215 | 9.72E-99 | -1.69E-46 |
| MS.gene051701 | MS.gene25092 | 0.817752 | 2.80E-52 | -1.69E-46 |
| MS.gene051701 | MS.gene34232 | 0.812476 | 4.16E-51 | -1.69E-46 |
| MS.gene051701 | MS.gene56067 | 0.801667 | 8.08E-49 | -1.69E-46 |
| MS.gene051701 | MS.gene56414 | 0.81067 | 1.03E-50 | -1.69E-46 |
| MS.gene051701 | MS.gene56462 | 0.802886 | 4.53E-49 | -1.69E-46 |
| MS.gene051701 | MS.gene63032 | 0.822299 | 2.55E-53 | -1.69E-46 |
| MS.gene051701 | MS.gene66973 | 0.800464 | 1.42E-48 | -1.69E-46 |
| MS.gene051701 | MS.gene86368 | 0.821273 | 4.41E-53 | -1.69E-46 |
| MS.gene051701 | MS.gene90880 | 0.80805 | 3.75E-50 | -1.69E-46 |
| MS.gene051701 | MS.gene91820 | 0.801065 | 1.07E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051701.t1 | MTR_7g056117 | 95.262 | 591 | 27 | 1 | 1 | 591 | 1 | 590 | 0.0 | 1169 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051701.t1 | AT3G07180 | 61.695 | 590 | 197 | 8 | 27 | 590 | 13 | 599 | 0.0 | 703 |
| MS.gene051701.t1 | AT3G07180 | 60.678 | 590 | 195 | 9 | 27 | 590 | 13 | 591 | 0.0 | 682 |
| MS.gene051701.t1 | AT3G07180 | 56.160 | 349 | 126 | 7 | 27 | 349 | 13 | 360 | 5.48e-122 | 368 |
| MS.gene051701.t1 | AT3G07180 | 68.041 | 97 | 31 | 0 | 494 | 590 | 358 | 454 | 2.06e-33 | 133 |
Find 152 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCTCATTTCTTTCGTTCT+AGG | 0.130408 | 7.3:+49238836 | MS.gene051701:CDS |
| TATAGTGTTGTGGTGGTAAA+TGG | 0.185656 | 7.3:+49239322 | MS.gene051701:CDS |
| CAAATCCTTTATACAGCTTT+GGG | 0.223453 | 7.3:-49241854 | None:intergenic |
| TGATCTTATTGTAGGGATTT+TGG | 0.238739 | 7.3:+49240137 | MS.gene051701:intron |
| CCAAATCCTTTATACAGCTT+TGG | 0.289879 | 7.3:-49241855 | None:intergenic |
| TTGAATCGGTTATCGGAGTT+TGG | 0.290757 | 7.3:-49238742 | None:intergenic |
| ATGATTATAATGGATGAAAT+TGG | 0.297476 | 7.3:+49244498 | MS.gene051701:CDS |
| GAAGTCAATGCTGTTGATTT+TGG | 0.301472 | 7.3:+49239220 | MS.gene051701:CDS |
| CCAAAGCTGTATAAAGGATT+TGG | 0.306450 | 7.3:+49241855 | MS.gene051701:CDS |
| GTGGATTGTTGGGAAGGTTT+CGG | 0.320075 | 7.3:+49239387 | MS.gene051701:CDS |
| AATGGATGAAATTGGAAAAC+AGG | 0.337157 | 7.3:+49244506 | MS.gene051701:CDS |
| CGATGAAGAGGCGGATGAAT+TGG | 0.338228 | 7.3:+49239261 | MS.gene051701:CDS |
| TGAATCGGTTATCGGAGTTT+GGG | 0.346873 | 7.3:-49238741 | None:intergenic |
| GGGCAGTTACGGCAACTTCT+TGG | 0.359643 | 7.3:+49242263 | MS.gene051701:CDS |
| CAAGGGATTGGGTTTATGAT+TGG | 0.364134 | 7.3:+49239557 | MS.gene051701:CDS |
| ATTACCAAGGATGATTATAA+TGG | 0.365327 | 7.3:+49244488 | MS.gene051701:CDS |
| GACCTTTATGTTGGTGAGTC+TGG | 0.368121 | 7.3:+49242299 | MS.gene051701:CDS |
| TTTGAAGTTGAATCGGTTAT+CGG | 0.368419 | 7.3:-49238749 | None:intergenic |
| GCTTGGATCTCTTTCTAGAT+TGG | 0.374672 | 7.3:+49244370 | MS.gene051701:CDS |
| GGGCTTCTAATAATGAACTA+AGG | 0.383129 | 7.3:+49239002 | MS.gene051701:CDS |
| GGATGCAAAGCCTCAATAAC+AGG | 0.383148 | 7.3:-49240185 | None:intergenic |
| CTTTCATGTGCCACAACGCT+TGG | 0.397509 | 7.3:+49244353 | MS.gene051701:CDS |
| ATTCGCAATGCGGTTGCAAT+GGG | 0.402020 | 7.3:+49239065 | MS.gene051701:CDS |
| AAGAATATGGTGAATGTGTA+TGG | 0.402517 | 7.3:+49239286 | MS.gene051701:CDS |
| TAATGCTGACCCAAGGGATT+GGG | 0.406220 | 7.3:+49239546 | MS.gene051701:CDS |
| CAGACATATGATTTCTCCTC+AGG | 0.412813 | 7.3:+49241894 | MS.gene051701:CDS |
| TACAGGCATGGGTGGATTGT+TGG | 0.417154 | 7.3:+49239376 | MS.gene051701:CDS |
| GCTGACTGTGTGTAGGGAAT+TGG | 0.420206 | 7.3:+49244295 | MS.gene051701:intron |
| TTTGGTAAGGTGTTTGTGAA+TGG | 0.424019 | 7.3:+49239442 | MS.gene051701:CDS |
| ATTCTCTTATCGCAGCTAGA+AGG | 0.425827 | 7.3:-49245867 | None:intergenic |
| TATAAAGGATTTGGAAAGTA+AGG | 0.431090 | 7.3:+49241864 | MS.gene051701:CDS |
| AAGTTCTCATGGGGCAGTTA+CGG | 0.431363 | 7.3:+49242252 | MS.gene051701:CDS |
| ACAGGCATGGGTGGATTGTT+GGG | 0.432435 | 7.3:+49239377 | MS.gene051701:CDS |
| AGAAGGATATGCATTGTAAC+TGG | 0.441608 | 7.3:-49245850 | None:intergenic |
| TTTATGCCGGTTGGTTCTGA+TGG | 0.442700 | 7.3:+49239496 | MS.gene051701:CDS |
| GTGAATGGTGGGAGTGAAGA+TGG | 0.444296 | 7.3:+49239457 | MS.gene051701:CDS |
| TCAACAGTGACATCGGCTAT+AGG | 0.447116 | 7.3:-49240206 | None:intergenic |
| ATAGTGTTGTGGTGGTAAAT+GGG | 0.447632 | 7.3:+49239323 | MS.gene051701:CDS |
| GGATGAATTGGTGAAGAATA+TGG | 0.450781 | 7.3:+49239273 | MS.gene051701:CDS |
| GAAGAGGTGAAGGCTGTGGT+TGG | 0.451712 | 7.3:+49239349 | MS.gene051701:CDS |
| TCATCCATTATAATCATCCT+TGG | 0.457874 | 7.3:-49244492 | None:intergenic |
| TAGAAAGTACTTGGCTTGGA+AGG | 0.458604 | 7.3:+49245912 | MS.gene051701:CDS |
| ATGAACTAAGGGATTCAATT+CGG | 0.460412 | 7.3:+49239014 | MS.gene051701:CDS |
| CTCCATTCGCAAGCTCTAGT+TGG | 0.461662 | 7.3:-49241666 | None:intergenic |
| GGTAAGGTGTTTGTGAATGG+TGG | 0.461816 | 7.3:+49239445 | MS.gene051701:CDS |
| AAATTTACACGGAAAGAGTA+AGG | 0.466437 | 7.3:-49238951 | None:intergenic |
| CGGAGTGAGTTTATGCCGGT+TGG | 0.469904 | 7.3:+49239487 | MS.gene051701:CDS |
| AAAATAGAAAGTACTTGGCT+TGG | 0.471472 | 7.3:+49245908 | MS.gene051701:CDS |
| GGATTCGATGTTGGAGGAGA+AGG | 0.474593 | 7.3:-49238924 | None:intergenic |
| CGATGTCACTGTTGAAAGCC+AGG | 0.476162 | 7.3:+49240214 | MS.gene051701:CDS |
| AAGAGGTGAAGGCTGTGGTT+GGG | 0.479480 | 7.3:+49239350 | MS.gene051701:CDS |
| AAATTTCGTGCTATCTTCAT+CGG | 0.483311 | 7.3:+49238968 | MS.gene051701:CDS |
| AGGTGCACGGTAGATTTCAA+TGG | 0.484784 | 7.3:-49238879 | None:intergenic |
| CAATCATAAACCCAATCCCT+TGG | 0.486930 | 7.3:-49239556 | None:intergenic |
| TTCTAGCTGCGATAAGAGAA+TGG | 0.489632 | 7.3:+49245869 | MS.gene051701:CDS |
| GGTGGTAAATGGGGAGGAAG+AGG | 0.491032 | 7.3:+49239333 | MS.gene051701:CDS |
| GGAGAGATCTCTAAGACTAA+TGG | 0.491895 | 7.3:+49241685 | MS.gene051701:CDS |
| GCTCAAAATAATGCAACTGT+TGG | 0.492447 | 7.3:+49245056 | MS.gene051701:CDS |
| TTAATGCTGACCCAAGGGAT+TGG | 0.493164 | 7.3:+49239545 | MS.gene051701:CDS |
| TGTGGGGAGGTGTTGTGGTA+TGG | 0.493358 | 7.3:+49241827 | MS.gene051701:CDS |
| GCTGCCATGCTCGTCATCCC+AGG | 0.496047 | 7.3:-49240354 | None:intergenic |
| TCTTTCGCTCCCTAGGAGAA+TGG | 0.497516 | 7.3:-49242327 | None:intergenic |
| TGAAACCTCTTTCGCTCCCT+AGG | 0.497597 | 7.3:-49242334 | None:intergenic |
| TCTGGCACATCCATTCTCCT+AGG | 0.497958 | 7.3:+49242317 | MS.gene051701:CDS |
| AGGCTGTGGTTGGGAAGTAC+AGG | 0.498454 | 7.3:+49239359 | MS.gene051701:CDS |
| CAGGAAGAAAATGAAGACTT+TGG | 0.498770 | 7.3:-49240335 | None:intergenic |
| TGCCAGACTCACCAACATAA+AGG | 0.499380 | 7.3:-49242301 | None:intergenic |
| GATTCGCAATGCGGTTGCAA+TGG | 0.500467 | 7.3:+49239064 | MS.gene051701:CDS |
| GATACTTCAGTTGCAGCTGG+TGG | 0.501022 | 7.3:+49240816 | MS.gene051701:CDS |
| AAATGGGGAGGAAGAGGTGA+AGG | 0.504258 | 7.3:+49239339 | MS.gene051701:CDS |
| AAGGATTCGATGCGGTCGAA+AGG | 0.506734 | 7.3:-49238905 | None:intergenic |
| GCGAAAGAGGTTTCACAGAA+TGG | 0.508016 | 7.3:+49242342 | MS.gene051701:CDS |
| TTAGATACTTCAGTTGCAGC+TGG | 0.514652 | 7.3:+49240813 | MS.gene051701:CDS |
| GCAGATGTGGGGAGGTGTTG+TGG | 0.516431 | 7.3:+49241822 | MS.gene051701:intron |
| GCAAGAAAATAGAAAGTACT+TGG | 0.520845 | 7.3:+49245903 | MS.gene051701:CDS |
| TCAATGGATTTCCAGAGAAG+AGG | 0.520889 | 7.3:-49238863 | None:intergenic |
| TGCCGGTTGGTTCTGATGGG+AGG | 0.522091 | 7.3:+49239500 | MS.gene051701:CDS |
| TTATGCCGGTTGGTTCTGAT+GGG | 0.523477 | 7.3:+49239497 | MS.gene051701:CDS |
| GTAAGGTGTTTGTGAATGGT+GGG | 0.525491 | 7.3:+49239446 | MS.gene051701:CDS |
| ATGAAGAGACGTTTAACGCC+GGG | 0.528765 | 7.3:-49238803 | None:intergenic |
| GCATGGGTGGATTGTTGGGA+AGG | 0.528777 | 7.3:+49239381 | MS.gene051701:CDS |
| GGAATGTATGATGCTTCTGC+TGG | 0.530664 | 7.3:+49245077 | MS.gene051701:CDS |
| TAGCTGATGGACATAATTGA+AGG | 0.531966 | 7.3:-49245255 | None:intergenic |
| GGCTTCTAATAATGAACTAA+GGG | 0.534042 | 7.3:+49239003 | MS.gene051701:CDS |
| CTCAAATGAATAGTAGCTGA+TGG | 0.534091 | 7.3:-49245268 | None:intergenic |
| GAATCGGTTATCGGAGTTTG+GGG | 0.534823 | 7.3:-49238740 | None:intergenic |
| ATCCTCCCATCAGAACCAAC+CGG | 0.536929 | 7.3:-49239502 | None:intergenic |
| TTTGTTGAAACCTGTTATTG+AGG | 0.540648 | 7.3:+49240175 | MS.gene051701:CDS |
| CAAGCGTTGTGGCACATGAA+AGG | 0.543032 | 7.3:-49244352 | None:intergenic |
| CCGCCACACGCAAAACCGCT+TGG | 0.546139 | 7.3:-49239414 | None:intergenic |
| GGAGAAATCATATGTCTGAC+TGG | 0.549427 | 7.3:-49241889 | None:intergenic |
| AATCATAAACCCAATCCCTT+GGG | 0.550520 | 7.3:-49239555 | None:intergenic |
| GGGACTGGATTCGATGTTGG+AGG | 0.552116 | 7.3:-49238930 | None:intergenic |
| GGAGGAAGAGGTGAAGGCTG+TGG | 0.552968 | 7.3:+49239345 | MS.gene051701:CDS |
| GATCTTGAGTACTGAATATG+TGG | 0.556061 | 7.3:-49240376 | None:intergenic |
| GTGGTTGGGAAGTACAGGCA+TGG | 0.557066 | 7.3:+49239364 | MS.gene051701:CDS |
| TAAGGGACTGGATTCGATGT+TGG | 0.557622 | 7.3:-49238933 | None:intergenic |
| ATTCTCCTAGGGAGCGAAAG+AGG | 0.562499 | 7.3:+49242329 | MS.gene051701:CDS |
| GTTTGCTTAATGCTGACCCA+AGG | 0.562968 | 7.3:+49239539 | MS.gene051701:CDS |
| TCGATGCGGTCGAAAGGAAG+AGG | 0.563156 | 7.3:-49238899 | None:intergenic |
| GATTGTTGGGAAGGTTTCGG+AGG | 0.563294 | 7.3:+49239390 | MS.gene051701:CDS |
| TGGTTGGGAAGTACAGGCAT+GGG | 0.563829 | 7.3:+49239365 | MS.gene051701:CDS |
| GGAGTGAAGATGGTTCGATT+CGG | 0.565920 | 7.3:+49239467 | MS.gene051701:CDS |
| ACAATAGAACATACAAAGAA+CGG | 0.567002 | 7.3:-49240401 | None:intergenic |
| AGAGAAGGTGTATAGTGTTG+TGG | 0.567287 | 7.3:+49239312 | MS.gene051701:CDS |
| ATACTTCAGTTGCAGCTGGT+GGG | 0.567698 | 7.3:+49240817 | MS.gene051701:CDS |
| ACACGGAAAGAGTAAGGGAC+TGG | 0.567958 | 7.3:-49238945 | None:intergenic |
| AAGTCAGATGACCTTTATGT+TGG | 0.569066 | 7.3:+49242290 | MS.gene051701:CDS |
| TTGGGAAGTACAGGCATGGG+TGG | 0.571152 | 7.3:+49239368 | MS.gene051701:CDS |
| AATCTCAGATTCACCACCAC+CGG | 0.575796 | 7.3:+49238694 | MS.gene051701:CDS |
| TAGTGTTGTGGTGGTAAATG+GGG | 0.577283 | 7.3:+49239324 | MS.gene051701:CDS |
| GATTCGGAGTGAGTTTATGC+CGG | 0.577521 | 7.3:+49239483 | MS.gene051701:CDS |
| GTCAAAAGTATTGCAACTTG+TGG | 0.578476 | 7.3:+49240842 | MS.gene051701:CDS |
| AGAGGACACTCCTTCGCAGA+TGG | 0.580151 | 7.3:-49241643 | None:intergenic |
| CTCCAACTAGAGCTTGCGAA+TGG | 0.584338 | 7.3:+49241664 | MS.gene051701:CDS |
| AGAAAGTACTTGGCTTGGAA+GGG | 0.584866 | 7.3:+49245913 | MS.gene051701:CDS |
| AAATCCTTTATACAGCTTTG+GGG | 0.588176 | 7.3:-49241853 | None:intergenic |
| TTTGCTTAATGCTGACCCAA+GGG | 0.588784 | 7.3:+49239540 | MS.gene051701:CDS |
| ACTCTGTGTCTGTCGTTGAA+AGG | 0.592026 | 7.3:+49239092 | MS.gene051701:CDS |
| AATCCTTTATACAGCTTTGG+GGG | 0.592811 | 7.3:-49241852 | None:intergenic |
| CTGGCACATCCATTCTCCTA+GGG | 0.593812 | 7.3:+49242318 | MS.gene051701:CDS |
| CAGATATATTCCATCTGCGA+AGG | 0.597939 | 7.3:+49241633 | MS.gene051701:intron |
| TCTTCCTGGGATGACGAGCA+TGG | 0.604602 | 7.3:+49240350 | MS.gene051701:CDS |
| TGAATCTGAGATTTCCGCCA+TGG | 0.609618 | 7.3:-49238684 | None:intergenic |
| CTGGCTTTCAACAGTGACAT+CGG | 0.614755 | 7.3:-49240213 | None:intergenic |
| CTTCAGTTGCAGCTGGTGGG+AGG | 0.616847 | 7.3:+49240820 | MS.gene051701:CDS |
| TTCGCAAGCTCTAGTTGGAG+AGG | 0.620379 | 7.3:-49241661 | None:intergenic |
| AACAGGTGAATTCTAATGAG+TGG | 0.622364 | 7.3:+49240787 | MS.gene051701:intron |
| TGCAGGTACAATCATTACCA+AGG | 0.629331 | 7.3:+49244475 | MS.gene051701:intron |
| ATTGAGGCGAAACGATGAAG+AGG | 0.631474 | 7.3:+49239249 | MS.gene051701:CDS |
| AAGGCAATCAAGATCTCTTG+CGG | 0.631831 | 7.3:+49245215 | MS.gene051701:CDS |
| AACCGCGGTGATTCGCAATG+CGG | 0.633088 | 7.3:+49239055 | MS.gene051701:CDS |
| TGTTGTGGTGGTAAATGGGG+AGG | 0.633382 | 7.3:+49239327 | MS.gene051701:CDS |
| AGAAAGAGATCCAAGCGTTG+TGG | 0.636450 | 7.3:-49244363 | None:intergenic |
| GGGAATTGGATGTCTTGTCA+AGG | 0.639791 | 7.3:+49244309 | MS.gene051701:intron |
| AATTTACACGGAAAGAGTAA+GGG | 0.640749 | 7.3:-49238950 | None:intergenic |
| ATACTATTGCAGATGTGGGG+AGG | 0.641438 | 7.3:+49241814 | MS.gene051701:intron |
| GGTCGAAAGGAAGAGGTGCA+CGG | 0.649156 | 7.3:-49238892 | None:intergenic |
| GAAGGTGTATAGTGTTGTGG+TGG | 0.655000 | 7.3:+49239315 | MS.gene051701:CDS |
| GAATGTGTATGGAGAAGAGA+AGG | 0.655024 | 7.3:+49239297 | MS.gene051701:CDS |
| AAGATAGCACGAAATTTACA+CGG | 0.657796 | 7.3:-49238962 | None:intergenic |
| GAGGCGAAACGATGAAGAGG+CGG | 0.662028 | 7.3:+49239252 | MS.gene051701:CDS |
| GATGAAGAGACGTTTAACGC+CGG | 0.669895 | 7.3:-49238804 | None:intergenic |
| AATCGGTTATCGGAGTTTGG+GGG | 0.670109 | 7.3:-49238739 | None:intergenic |
| GCAATCAAGATCTCTTGCGG+AGG | 0.670297 | 7.3:+49245218 | MS.gene051701:CDS |
| TCTATACTATTGCAGATGTG+GGG | 0.681956 | 7.3:+49241811 | MS.gene051701:intron |
| TTCGCAATGCGGTTGCAATG+GGG | 0.684348 | 7.3:+49239066 | MS.gene051701:CDS |
| GAAGGTTTCGGAGGACCAAG+CGG | 0.692882 | 7.3:+49239399 | MS.gene051701:CDS |
| AAAATGAAGACTTTGGTGTG+TGG | 0.709097 | 7.3:-49240328 | None:intergenic |
| AAAATGATTGAATTTAACCG+CGG | 0.716413 | 7.3:+49239040 | MS.gene051701:CDS |
| AACCGCATTGCGAATCACCG+CGG | 0.718123 | 7.3:-49239057 | None:intergenic |
| TGGAGGAGAAGGATTCGATG+CGG | 0.778409 | 7.3:-49238913 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 49238686 | 49245957 | 49238686 | ID=MS.gene051701 |
| chr7.3 | mRNA | 49238686 | 49245957 | 49238686 | ID=MS.gene051701.t1;Parent=MS.gene051701 |
| chr7.3 | exon | 49238686 | 49239113 | 49238686 | ID=MS.gene051701.t1.exon1;Parent=MS.gene051701.t1 |
| chr7.3 | CDS | 49238686 | 49239113 | 49238686 | ID=cds.MS.gene051701.t1;Parent=MS.gene051701.t1 |
| chr7.3 | exon | 49239213 | 49239578 | 49239213 | ID=MS.gene051701.t1.exon2;Parent=MS.gene051701.t1 |
| chr7.3 | CDS | 49239213 | 49239578 | 49239213 | ID=cds.MS.gene051701.t1;Parent=MS.gene051701.t1 |
| chr7.3 | exon | 49240151 | 49240235 | 49240151 | ID=MS.gene051701.t1.exon3;Parent=MS.gene051701.t1 |
| chr7.3 | CDS | 49240151 | 49240235 | 49240151 | ID=cds.MS.gene051701.t1;Parent=MS.gene051701.t1 |
| chr7.3 | exon | 49240320 | 49240409 | 49240320 | ID=MS.gene051701.t1.exon4;Parent=MS.gene051701.t1 |
| chr7.3 | CDS | 49240320 | 49240409 | 49240320 | ID=cds.MS.gene051701.t1;Parent=MS.gene051701.t1 |
| chr7.3 | exon | 49240792 | 49240865 | 49240792 | ID=MS.gene051701.t1.exon5;Parent=MS.gene051701.t1 |
| chr7.3 | CDS | 49240792 | 49240865 | 49240792 | ID=cds.MS.gene051701.t1;Parent=MS.gene051701.t1 |
| chr7.3 | exon | 49241636 | 49241720 | 49241636 | ID=MS.gene051701.t1.exon6;Parent=MS.gene051701.t1 |
| chr7.3 | CDS | 49241636 | 49241720 | 49241636 | ID=cds.MS.gene051701.t1;Parent=MS.gene051701.t1 |
| chr7.3 | exon | 49241826 | 49241915 | 49241826 | ID=MS.gene051701.t1.exon7;Parent=MS.gene051701.t1 |
| chr7.3 | CDS | 49241826 | 49241915 | 49241826 | ID=cds.MS.gene051701.t1;Parent=MS.gene051701.t1 |
| chr7.3 | exon | 49242233 | 49242363 | 49242233 | ID=MS.gene051701.t1.exon8;Parent=MS.gene051701.t1 |
| chr7.3 | CDS | 49242233 | 49242363 | 49242233 | ID=cds.MS.gene051701.t1;Parent=MS.gene051701.t1 |
| chr7.3 | exon | 49244310 | 49244391 | 49244310 | ID=MS.gene051701.t1.exon9;Parent=MS.gene051701.t1 |
| chr7.3 | CDS | 49244310 | 49244391 | 49244310 | ID=cds.MS.gene051701.t1;Parent=MS.gene051701.t1 |
| chr7.3 | exon | 49244480 | 49244527 | 49244480 | ID=MS.gene051701.t1.exon10;Parent=MS.gene051701.t1 |
| chr7.3 | CDS | 49244480 | 49244527 | 49244480 | ID=cds.MS.gene051701.t1;Parent=MS.gene051701.t1 |
| chr7.3 | exon | 49245026 | 49245098 | 49245026 | ID=MS.gene051701.t1.exon11;Parent=MS.gene051701.t1 |
| chr7.3 | CDS | 49245026 | 49245098 | 49245026 | ID=cds.MS.gene051701.t1;Parent=MS.gene051701.t1 |
| chr7.3 | exon | 49245208 | 49245311 | 49245208 | ID=MS.gene051701.t1.exon12;Parent=MS.gene051701.t1 |
| chr7.3 | CDS | 49245208 | 49245311 | 49245208 | ID=cds.MS.gene051701.t1;Parent=MS.gene051701.t1 |
| chr7.3 | exon | 49245838 | 49245957 | 49245838 | ID=MS.gene051701.t1.exon13;Parent=MS.gene051701.t1 |
| chr7.3 | CDS | 49245838 | 49245957 | 49245838 | ID=cds.MS.gene051701.t1;Parent=MS.gene051701.t1 |
| Gene Sequence |
| Protein sequence |
