AlfalfaGEDB | MS.gene66973

M. sativa cultivar XinJiangDaYe / MS.gene66973

KEGG: K09500
GO: GO:0000166 GO:0003674 GO:0005488 GO:0005515 GO:0005524 GO:0006457 GO:0008144 GO:0008150 GO:0009987 GO:0017076 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0043167 GO:0043168 GO:0051082 GO:0097159 GO:0097367 GO:1901265 GO:1901363
PFAM: PF00118.27

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene66973.t1	XP_003619011.2	99.6	540	2	0	1	540	1	540	9.90E-301	1042

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene66973.t1	Q94K05	81.7	541	96	1	3	540	9	549	2.1e-254	879.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene66973.t1	G7KQ56	99.6	540	2	0	1	540	1	540	7.2e-301	1042.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049255	MS.gene66973	0.806862	6.69E-50	-1.69E-46
MS.gene049824	MS.gene66973	0.84692	1.60E-59	-1.69E-46
MS.gene049825	MS.gene66973	0.820091	8.24E-53	-1.69E-46
MS.gene049850	MS.gene66973	0.806064	9.86E-50	-1.69E-46
MS.gene049873	MS.gene66973	0.809459	1.87E-50	-1.69E-46
MS.gene050559	MS.gene66973	0.809467	1.87E-50	-1.69E-46
MS.gene050561	MS.gene66973	0.800096	1.69E-48	-1.69E-46
MS.gene050689	MS.gene66973	0.838408	2.93E-57	-1.69E-46
MS.gene050877	MS.gene66973	0.818308	2.10E-52	-1.69E-46
MS.gene050901	MS.gene66973	0.812212	4.75E-51	-1.69E-46
MS.gene050945	MS.gene66973	0.820099	8.20E-53	-1.69E-46
MS.gene051279	MS.gene66973	0.804072	2.57E-49	-1.69E-46
MS.gene051343	MS.gene66973	0.814011	1.91E-51	-1.69E-46
MS.gene051628	MS.gene66973	0.806334	8.65E-50	-1.69E-46
MS.gene051701	MS.gene66973	0.800464	1.42E-48	-1.69E-46
MS.gene051719	MS.gene66973	0.807794	4.25E-50	-1.69E-46
MS.gene051720	MS.gene66973	0.811326	7.40E-51	-1.69E-46
MS.gene051744	MS.gene66973	0.826107	3.25E-54	-1.69E-46
MS.gene052133	MS.gene66973	0.800247	1.58E-48	-1.69E-46
MS.gene052239	MS.gene66973	-0.809643	1.71E-50	-1.69E-46
MS.gene052582	MS.gene66973	0.815461	9.13E-52	-1.69E-46
MS.gene052584	MS.gene66973	0.818472	1.93E-52	-1.69E-46
MS.gene052879	MS.gene66973	0.80059	1.34E-48	-1.69E-46
MS.gene053079	MS.gene66973	0.805541	1.27E-49	-1.69E-46
MS.gene053080	MS.gene66973	0.81458	1.43E-51	-1.69E-46
MS.gene053122	MS.gene66973	0.87382	1.09E-67	-1.69E-46
MS.gene053195	MS.gene66973	0.812243	4.68E-51	-1.69E-46
MS.gene053226	MS.gene66973	0.847662	1.00E-59	-1.69E-46
MS.gene053541	MS.gene66973	0.810175	1.31E-50	-1.69E-46
MS.gene053542	MS.gene66973	0.818797	1.63E-52	-1.69E-46
MS.gene05364	MS.gene66973	0.876922	9.50E-69	-1.69E-46
MS.gene053931	MS.gene66973	0.804113	2.53E-49	-1.69E-46
MS.gene054651	MS.gene66973	0.817235	3.66E-52	-1.69E-46
MS.gene055512	MS.gene66973	0.840784	7.06E-58	-1.69E-46
MS.gene055580	MS.gene66973	-0.834766	2.48E-56	-1.69E-46
MS.gene055694	MS.gene66973	0.841572	4.38E-58	-1.69E-46
MS.gene055808	MS.gene66973	0.83102	2.12E-55	-1.69E-46
MS.gene056005	MS.gene66973	0.809032	2.31E-50	-1.69E-46
MS.gene056043	MS.gene66973	-0.812651	3.81E-51	-1.69E-46
MS.gene056091	MS.gene66973	0.80176	7.73E-49	-1.69E-46
MS.gene056215	MS.gene66973	0.812637	3.84E-51	-1.69E-46
MS.gene056308	MS.gene66973	0.811261	7.65E-51	-1.69E-46
MS.gene056366	MS.gene66973	0.830259	3.25E-55	-1.69E-46
MS.gene057060	MS.gene66973	0.812032	5.20E-51	-1.69E-46
MS.gene057208	MS.gene66973	0.80369	3.09E-49	-1.69E-46
MS.gene057444	MS.gene66973	0.810001	1.43E-50	-1.69E-46
MS.gene057694	MS.gene66973	0.804204	2.42E-49	-1.69E-46
MS.gene057705	MS.gene66973	0.851581	8.09E-61	-1.69E-46
MS.gene058008	MS.gene66973	0.817838	2.68E-52	-1.69E-46
MS.gene058009	MS.gene66973	0.819967	8.79E-53	-1.69E-46
MS.gene058149	MS.gene66973	0.809565	1.78E-50	-1.69E-46
MS.gene058216	MS.gene66973	0.807865	4.10E-50	-1.69E-46
MS.gene058625	MS.gene66973	0.811467	6.90E-51	-1.69E-46
MS.gene05953	MS.gene66973	0.803983	2.69E-49	-1.69E-46
MS.gene05954	MS.gene66973	0.806673	7.34E-50	-1.69E-46
MS.gene059625	MS.gene66973	0.816445	5.51E-52	-1.69E-46
MS.gene05978	MS.gene66973	0.849826	2.52E-60	-1.69E-46
MS.gene059935	MS.gene66973	0.805393	1.36E-49	-1.69E-46
MS.gene060194	MS.gene66973	0.811737	6.03E-51	-1.69E-46
MS.gene060365	MS.gene66973	0.822244	2.63E-53	-1.69E-46
MS.gene060429	MS.gene66973	0.831778	1.38E-55	-1.69E-46
MS.gene060587	MS.gene66973	0.840122	1.05E-57	-1.69E-46
MS.gene061100	MS.gene66973	0.801445	8.97E-49	-1.69E-46
MS.gene061176	MS.gene66973	0.803555	3.30E-49	-1.69E-46
MS.gene061177	MS.gene66973	0.804725	1.88E-49	-1.69E-46
MS.gene061178	MS.gene66973	0.803582	3.25E-49	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene77306	MS.gene66973	PPI
MS.gene002442	MS.gene66973	PPI
MS.gene66973	MS.gene72686	PPI
MS.gene66973	MS.gene27902	PPI
MS.gene66973	MS.gene050877	PPI
MS.gene73093	MS.gene66973	PPI
MS.gene043643	MS.gene66973	PPI
MS.gene035826	MS.gene66973	PPI
MS.gene39837	MS.gene66973	PPI
MS.gene066104	MS.gene66973	PPI
MS.gene064351	MS.gene66973	PPI
MS.gene40879	MS.gene66973	PPI
MS.gene035828	MS.gene66973	PPI
MS.gene66973	MS.gene32795	PPI
MS.gene75537	MS.gene66973	PPI
MS.gene66973	MS.gene067072	PPI
MS.gene66973	MS.gene86517	PPI
MS.gene66973	MS.gene97876	PPI
MS.gene031181	MS.gene66973	PPI
MS.gene99872	MS.gene66973	PPI
MS.gene82509	MS.gene66973	PPI
MS.gene031184	MS.gene66973	PPI
MS.gene043595	MS.gene66973	PPI
MS.gene005257	MS.gene66973	PPI
MS.gene64915	MS.gene66973	PPI
MS.gene058828	MS.gene66973	PPI
MS.gene031183	MS.gene66973	PPI
MS.gene01425	MS.gene66973	PPI
MS.gene043593	MS.gene66973	PPI
MS.gene016844	MS.gene66973	PPI
MS.gene66973	MS.gene056063	PPI
MS.gene37845	MS.gene66973	PPI
MS.gene069339	MS.gene66973	PPI
MS.gene045180	MS.gene66973	PPI
MS.gene93918	MS.gene66973	PPI
MS.gene66973	MS.gene005258	PPI
MS.gene97064	MS.gene66973	PPI
MS.gene043645	MS.gene66973	PPI
MS.gene66973	MS.gene98781	PPI
MS.gene047578	MS.gene66973	PPI
MS.gene014682	MS.gene66973	PPI
MS.gene66973	MS.gene045185	PPI
MS.gene043161	MS.gene66973	PPI
MS.gene44130	MS.gene66973	PPI
MS.gene066566	MS.gene66973	PPI
MS.gene064353	MS.gene66973	PPI
MS.gene78457	MS.gene66973	PPI
MS.gene47857	MS.gene66973	PPI
MS.gene058827	MS.gene66973	PPI
MS.gene48614	MS.gene66973	PPI
MS.gene66973	MS.gene01091	PPI
MS.gene035825	MS.gene66973	PPI
MS.gene66973	MS.gene99406	PPI
MS.gene66973	MS.gene40335	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene66973.t1	MTR_6g032870	99.630	540	2	0	1	540	1	540	0.0	1105
MS.gene66973.t1	MTR_1g030650	91.497	541	44	2	1	540	4	543	0.0	1008
MS.gene66973.t1	MTR_2g013540	28.755	546	361	12	5	530	1	538	5.87e-67	226
MS.gene66973.t1	MTR_3g109925	28.571	511	351	5	20	520	23	529	3.89e-66	224
MS.gene66973.t1	MTR_8g088270	29.400	517	339	9	25	520	23	534	1.09e-62	215
MS.gene66973.t1	MTR_5g087560	27.099	524	363	10	8	520	11	526	2.16e-59	206
MS.gene66973.t1	MTR_3g086330	28.599	521	354	9	10	520	18	530	1.90e-55	195
MS.gene66973.t1	MTR_7g067470	28.715	498	342	8	33	524	30	520	2.49e-52	186
MS.gene66973.t1	MTR_3g109925	26.680	506	310	5	20	520	23	472	6.42e-52	184
MS.gene66973.t1	MTR_7g113470	28.514	498	343	8	33	524	30	520	4.35e-51	183
MS.gene66973.t1	MTR_7g406870	25.524	525	361	11	22	524	18	534	3.10e-39	150
MS.gene66973.t1	MTR_2g013540	25.858	379	264	8	166	530	14	389	2.49e-35	137
MS.gene66973.t1	MTR_8g105970	27.097	310	182	8	188	482	69	349	2.23e-23	102
MS.gene66973.t1	MTR_7g406870	23.721	430	298	11	117	524	1	422	4.41e-20	93.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene66973.t1	AT3G03960	82.987	529	90	0	3	531	9	537	0.0	928
MS.gene66973.t1	AT3G18190	28.911	505	345	5	26	520	33	533	9.32e-70	233
MS.gene66973.t1	AT3G20050	29.400	517	339	9	25	520	23	534	1.25e-63	217
MS.gene66973.t1	AT5G26360	28.352	522	350	10	26	530	24	538	4.65e-62	213
MS.gene66973.t1	AT3G11830	27.341	534	366	11	1	520	1	526	1.42e-59	207
MS.gene66973.t1	AT3G11830	27.341	534	364	12	1	520	1	524	1.36e-57	201
MS.gene66973.t1	AT1G24510	28.876	516	349	9	15	520	23	530	5.03e-56	197
MS.gene66973.t1	AT1G24510	27.542	472	325	8	59	520	13	477	9.18e-47	170
MS.gene66973.t1	AT5G20890	27.108	498	350	8	33	524	30	520	2.05e-46	170
MS.gene66973.t1	AT1G24510	27.115	461	319	8	70	520	1	454	7.51e-43	159
MS.gene66973.t1	AT3G02530	25.912	521	354	12	27	524	23	534	9.94e-41	154
MS.gene66973.t1	AT5G16070	25.626	519	357	11	27	524	23	533	2.66e-40	153
MS.gene66973.t1	AT4G08640	36.782	174	79	4	194	366	3	146	2.05e-23	97.4

Find 124 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GCATCCTGCTGCCAAGATTT+TGG	0.215841	6.4:+3998970	MS.gene66973:CDS
CTGAAATTGAATTAGCTAAA+AGG	0.231233	6.4:+4003367	MS.gene66973:CDS
TGTTCGTGTTGCAAAGCTTT+TGG	0.241786	6.4:+3999804	MS.gene66973:CDS
AAGGCTCAACAAGAGGAAAT+TGG	0.270131	6.4:+3999004	MS.gene66973:CDS
TGCTTCAGGTATGAATAAAA+TGG	0.271217	6.4:+3998877	MS.gene66973:intron
TTTAAGGTTGCTGTGTTTGC+TGG	0.271623	6.4:+4001084	MS.gene66973:intron
TACCAAAGTTGGCATTGATT+TGG	0.290054	6.4:+4004120	MS.gene66973:CDS
AATGATTATTGTTACCATTA+GGG	0.290307	6.4:-3997705	None:intergenic
GCATTCTCGGCCAAAGTTCT+TGG	0.290944	6.4:-4004040	None:intergenic
TATTCCTGCATGCAGACTTA+TGG	0.303161	6.4:+4002452	MS.gene66973:intron
TGCATTTAGCCCGGCATTCT+CGG	0.305009	6.4:-4004053	None:intergenic
AATTTGACTATTTCGTTTGC+TGG	0.309725	6.4:+3999037	MS.gene66973:CDS
ACATAACAGTGCAGTTGTTC+CGG	0.310616	6.4:+3999837	MS.gene66973:CDS
TAAAATGGTTATAAATCATT+TGG	0.322066	6.4:+3998892	MS.gene66973:CDS
GGAGCAGGTTGGTCTCTCCT+TGG	0.325618	6.4:-4004716	None:intergenic
CTTTATGCAGAACATGCTAA+TGG	0.328847	6.4:+4004094	MS.gene66973:CDS
GCAGTTGCTAGCAAGCAATT+TGG	0.328954	6.4:+3999600	MS.gene66973:CDS
GGAGGAAGGCTCAGAGAATA+TGG	0.336035	6.4:+3999536	MS.gene66973:CDS
AACGTACCCTGTTTCCTTGT+AGG	0.343378	6.4:-4003403	None:intergenic
TTGTCCACATTAAAGTTTGC+AGG	0.357634	6.4:-3999781	None:intergenic
AGGCTCAACAAGAGGAAATT+GGG	0.365250	6.4:+3999005	MS.gene66973:CDS
CATAACAGTGCAGTTGTTCC+GGG	0.370426	6.4:+3999838	MS.gene66973:CDS
TCTGTTTCAGTCGAGGAAAT+TGG	0.370760	6.4:+4002661	MS.gene66973:CDS
TCCGCAAATCCAAGATCATC+TGG	0.377298	6.4:-4002637	None:intergenic
CATCCAAGCGAGATCATCAT+TGG	0.378568	6.4:+3999103	MS.gene66973:CDS
ATGTCTCAACCATGAGGGTC+TGG	0.382897	6.4:+4004161	MS.gene66973:CDS
CCCAGATGATCTTGGATTTG+CGG	0.390935	6.4:+4002636	MS.gene66973:CDS
TCTCTCCTTGGGCCACCAGC+AGG	0.398550	6.4:-4004704	None:intergenic
GAGCAGGTTGGTCTCTCCTT+GGG	0.402062	6.4:-4004715	None:intergenic
CAACCAAACCCAGATGATCT+TGG	0.413255	6.4:+4002628	MS.gene66973:CDS
AGAACTTTGGCCGAGAATGC+CGG	0.420014	6.4:+4004043	MS.gene66973:CDS
ATCAAGGCAGTAGCGGATTC+TGG	0.424019	6.4:+4002233	MS.gene66973:CDS
AGAACTTCTCTTGGCCCTAA+TGG	0.426506	6.4:+3997691	MS.gene66973:CDS
TCGAGGAAATTGGTGGTGCC+AGG	0.426799	6.4:+4002671	MS.gene66973:CDS
TGAAATTGAATTAGCTAAAA+GGG	0.429159	6.4:+4003368	MS.gene66973:CDS
TTCCAAATCAATGCCAACTT+TGG	0.434327	6.4:-4004122	None:intergenic
AATCCAAGATCATCTGGGTT+TGG	0.435232	6.4:-4002631	None:intergenic
AGTTGAAATATTAGATGAAC+TGG	0.440379	6.4:+3999512	MS.gene66973:CDS
AAGGTGCCGAGGAACTTATT+AGG	0.442874	6.4:+3999071	MS.gene66973:CDS
TCAGTTCTCAAAACCATTCC+CGG	0.446644	6.4:-3999856	None:intergenic
CAGTGCAGTTGTTCCGGGAA+TGG	0.449323	6.4:+3999843	MS.gene66973:CDS
TGAGATGATTCCAAGAACTT+TGG	0.451715	6.4:+4004030	MS.gene66973:CDS
GAGAACAGCTTCGTCGAGAC+CGG	0.452013	6.4:-3997629	None:intergenic
TTTGGAACCTGGTGTTTGTA+AGG	0.460335	6.4:+4004138	MS.gene66973:CDS
ATTTGACTATTTCGTTTGCT+GGG	0.461351	6.4:+3999038	MS.gene66973:CDS
CACCGTACTACGAGTCGATC+AGG	0.465991	6.4:+4004395	MS.gene66973:CDS
GCTAATGGAAATACCAAAGT+TGG	0.467287	6.4:+4004109	MS.gene66973:CDS
ATTAGGGCCAAGAGAAGTTC+TGG	0.472287	6.4:-3997689	None:intergenic
ACTAGCCAAAACCAAAATCT+TGG	0.474887	6.4:-3998981	None:intergenic
TTATTTGTCAGGCCATGTGC+AGG	0.477560	6.4:+4003313	MS.gene66973:intron
GAACTTTGGCCGAGAATGCC+GGG	0.480537	6.4:+4004044	MS.gene66973:CDS
ATATACTAAAGCAATCAATA+AGG	0.480834	6.4:+3999126	MS.gene66973:CDS
TTGCGACAGAACCAGTTGTT+CGG	0.484623	6.4:-4002515	None:intergenic
AGGAGAGACCAACCTGCTCC+TGG	0.487866	6.4:+4004719	MS.gene66973:CDS
ATTTCAGTTGCAGCAGCTCC+AGG	0.489458	6.4:-4003351	None:intergenic
GAATATGGATGTGCGTGATA+AGG	0.491496	6.4:+3999551	MS.gene66973:CDS
CAGCTCTTTCAAGATCATCT+AGG	0.496025	6.4:-4002915	None:intergenic
TGTCTCAACCATGAGGGTCT+GGG	0.500177	6.4:+4004162	MS.gene66973:CDS
CAAGATCATCTGGGTTTGGT+TGG	0.506048	6.4:-4002627	None:intergenic
TGCCGAGGAACTTATTAGGA+TGG	0.509165	6.4:+3999075	MS.gene66973:CDS
AGGGATAGCCGCATTGTACC+TGG	0.509862	6.4:+4003333	MS.gene66973:CDS
GCCGAGGAACTTATTAGGAT+GGG	0.512153	6.4:+3999076	MS.gene66973:CDS
TCTCATACATTCAGCCGAGC+AGG	0.513058	6.4:+4001146	MS.gene66973:CDS
TCTTCATCCATGCCAGGAGC+AGG	0.513453	6.4:-4004731	None:intergenic
TCCTTTAGTTTCAGTTGCAG+AGG	0.520181	6.4:-4001118	None:intergenic
TATCCAATGATGATCTCGCT+TGG	0.521038	6.4:-3999106	None:intergenic
ACCTCTGCAACTGAAACTAA+AGG	0.521805	6.4:+4001117	MS.gene66973:CDS
TACCTGATCGACTCGTAGTA+CGG	0.523767	6.4:-4004397	None:intergenic
AACTAGTCTTCATCCATGCC+AGG	0.528921	6.4:-4004737	None:intergenic
AAAACCAAAATCTTGGCAGC+AGG	0.529463	6.4:-3998974	None:intergenic
ACTATCACCAGAACTTCTCT+TGG	0.531473	6.4:+3997682	MS.gene66973:CDS
GTCAATTTGCTATACCTGCT+CGG	0.533395	6.4:-4001160	None:intergenic
GAGGGTCACAAGCATCTCTC+CGG	0.535382	6.4:+3997610	MS.gene66973:CDS
ATTATTATGTCAAAACCTGC+TGG	0.542007	6.4:+4004689	MS.gene66973:CDS
CGATGGAGTGAACACTTACA+AGG	0.542508	6.4:+4002942	MS.gene66973:CDS
AGACCAACCTGCTCCTGGCA+TGG	0.542798	6.4:+4004724	MS.gene66973:CDS
AATCTCCATTGCATTTAGCC+CGG	0.545051	6.4:-4004062	None:intergenic
GTTTCAGTCGAGGAAATTGG+TGG	0.546603	6.4:+4002664	MS.gene66973:CDS
TGGTGGAGCCGTAGGAGAGA+TGG	0.553393	6.4:+4002274	MS.gene66973:CDS
GGCTAGTAAGGCTCAACAAG+AGG	0.559091	6.4:+3998997	MS.gene66973:CDS
ACCCATCCTAATAAGTTCCT+CGG	0.559841	6.4:-3999077	None:intergenic
TGCGGATTCTGTTTCAGTCG+AGG	0.560194	6.4:+4002654	MS.gene66973:CDS
AATATTAGATGAACTGGTGG+AGG	0.560544	6.4:+3999518	MS.gene66973:CDS
TGTCCACATTAAAGTTTGCA+GGG	0.568433	6.4:-3999780	None:intergenic
ATGCAAAGCCATCTCTCCTA+CGG	0.571467	6.4:-4002282	None:intergenic
AACAACTGGTTCTGTCGCAA+TGG	0.571861	6.4:+4002518	MS.gene66973:CDS
TAAAGTAGAGGAGCTCATCA+AGG	0.574164	6.4:+4002217	MS.gene66973:CDS
GTTGGCATTGATTTGGAACC+TGG	0.574452	6.4:+4004127	MS.gene66973:CDS
CAACAAGAGGAAATTGGGGA+TGG	0.575772	6.4:+3999010	MS.gene66973:CDS
TAGCAAGCAATTTGGTCAAG+AGG	0.576189	6.4:+3999608	MS.gene66973:CDS
CAAAACCTGCTGGTGGCCCA+AGG	0.577550	6.4:+4004699	MS.gene66973:CDS
AACTGAAGAGGCTAAAGTAG+AGG	0.578759	6.4:+4002205	MS.gene66973:CDS
CATCCATGCCAGGAGCAGGT+TGG	0.580972	6.4:-4004727	None:intergenic
TGAAATATTAGATGAACTGG+TGG	0.582730	6.4:+3999515	MS.gene66973:CDS
CGAGGAAATTGGTGGTGCCA+GGG	0.582975	6.4:+4002672	MS.gene66973:CDS
GAATGCCGGGCTAAATGCAA+TGG	0.584583	6.4:+4004057	MS.gene66973:CDS
ATTGTCAGTGGTGGAGCCGT+AGG	0.585297	6.4:+4002266	MS.gene66973:CDS
ATCAGCAATAAGTGAGCAGA+GGG	0.585726	6.4:-3999634	None:intergenic
AAGGTTGCTGTGTTTGCTGG+AGG	0.588919	6.4:+4001087	MS.gene66973:intron
ATGTAGATCCCAGACCCTCA+TGG	0.593898	6.4:-4004170	None:intergenic
AAGATCATCTAGGATACTAT+CGG	0.598091	6.4:-4002905	None:intergenic
TTAGATGAACTGGTGGAGGA+AGG	0.599505	6.4:+3999522	MS.gene66973:CDS
TATTTGTCAGGCCATGTGCA+GGG	0.599894	6.4:+4003314	MS.gene66973:intron
AAACCCTGCAAACTTTAATG+TGG	0.601791	6.4:+3999777	MS.gene66973:CDS
AATGCAATCGATGCTGAAAG+AGG	0.603643	6.4:+3997591	MS.gene66973:CDS
TCTTCCCACAAAATGGCATA+CGG	0.607111	6.4:+3997568	None:intergenic
ATGCAATCGATGCTGAAAGA+GGG	0.610761	6.4:+3997592	MS.gene66973:CDS
CCGCAAATCCAAGATCATCT+GGG	0.621468	6.4:-4002636	None:intergenic
GGAGCTCATCAAGGCAGTAG+CGG	0.625122	6.4:+4002226	MS.gene66973:CDS
TTTGACTATTTCGTTTGCTG+GGG	0.628512	6.4:+3999039	MS.gene66973:CDS
GGCTCAACAAGAGGAAATTG+GGG	0.629238	6.4:+3999006	MS.gene66973:CDS
GAGACATCCTTACAAACACC+AGG	0.636091	6.4:-4004145	None:intergenic
TGGAAATTCTGTGGCCACTG+TGG	0.644536	6.4:+4002867	MS.gene66973:CDS
GCGAAAGTGATTGTCAGTGG+TGG	0.647300	6.4:+4002257	MS.gene66973:CDS
CTTGAAAGAGCTGTTGACGA+TGG	0.657033	6.4:+4002925	MS.gene66973:CDS
TAAGGATGTCTCAACCATGA+GGG	0.661073	6.4:+4004156	MS.gene66973:CDS
CATCAGCAATAAGTGAGCAG+AGG	0.662850	6.4:-3999635	None:intergenic
GTAAGGATGTCTCAACCATG+AGG	0.676348	6.4:+4004155	MS.gene66973:CDS
TGAAGTTGATGGAAATTCTG+TGG	0.680557	6.4:+4002858	MS.gene66973:CDS
ATTATGTCAAAACCTGCTGG+TGG	0.692903	6.4:+4004692	MS.gene66973:CDS
GGTGCGAAAGTGATTGTCAG+TGG	0.700135	6.4:+4002254	MS.gene66973:CDS
CAGCAGCTCCAGGTACAATG+CGG	0.705570	6.4:-4003341	None:intergenic
AATGCGGCTATCCCTGCACA+TGG	0.705979	6.4:-4003325	None:intergenic
ACTTCCTCGTAAAACCACAG+TGG	0.806467	6.4:-4002881	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
chr6.4	gene	3997580	4004757	3997580	ID=MS.gene66973
chr6.4	mRNA	3997580	4004757	3997580	ID=MS.gene66973.t1;Parent=MS.gene66973
chr6.4	exon	3997580	3997712	3997580	ID=MS.gene66973.t1.exon1;Parent=MS.gene66973.t1
chr6.4	CDS	3997580	3997712	3997580	ID=cds.MS.gene66973.t1;Parent=MS.gene66973.t1
chr6.4	exon	3998885	3999147	3998885	ID=MS.gene66973.t1.exon2;Parent=MS.gene66973.t1
chr6.4	CDS	3998885	3999147	3998885	ID=cds.MS.gene66973.t1;Parent=MS.gene66973.t1
chr6.4	exon	3999510	3999656	3999510	ID=MS.gene66973.t1.exon3;Parent=MS.gene66973.t1
chr6.4	CDS	3999510	3999656	3999510	ID=cds.MS.gene66973.t1;Parent=MS.gene66973.t1
chr6.4	exon	3999754	3999915	3999754	ID=MS.gene66973.t1.exon4;Parent=MS.gene66973.t1
chr6.4	CDS	3999754	3999915	3999754	ID=cds.MS.gene66973.t1;Parent=MS.gene66973.t1
chr6.4	exon	4001090	4001167	4001090	ID=MS.gene66973.t1.exon5;Parent=MS.gene66973.t1
chr6.4	CDS	4001090	4001167	4001090	ID=cds.MS.gene66973.t1;Parent=MS.gene66973.t1
chr6.4	exon	4002188	4002321	4002188	ID=MS.gene66973.t1.exon6;Parent=MS.gene66973.t1
chr6.4	CDS	4002188	4002321	4002188	ID=cds.MS.gene66973.t1;Parent=MS.gene66973.t1
chr6.4	exon	4002467	4002539	4002467	ID=MS.gene66973.t1.exon7;Parent=MS.gene66973.t1
chr6.4	CDS	4002467	4002539	4002467	ID=cds.MS.gene66973.t1;Parent=MS.gene66973.t1
chr6.4	exon	4002616	4002693	4002616	ID=MS.gene66973.t1.exon8;Parent=MS.gene66973.t1
chr6.4	CDS	4002616	4002693	4002616	ID=cds.MS.gene66973.t1;Parent=MS.gene66973.t1
chr6.4	exon	4002841	4002963	4002841	ID=MS.gene66973.t1.exon9;Parent=MS.gene66973.t1
chr6.4	CDS	4002841	4002963	4002841	ID=cds.MS.gene66973.t1;Parent=MS.gene66973.t1
chr6.4	exon	4003324	4003418	4003324	ID=MS.gene66973.t1.exon10;Parent=MS.gene66973.t1
chr6.4	CDS	4003324	4003418	4003324	ID=cds.MS.gene66973.t1;Parent=MS.gene66973.t1
chr6.4	exon	4003991	4004200	4003991	ID=MS.gene66973.t1.exon11;Parent=MS.gene66973.t1
chr6.4	CDS	4003991	4004200	4003991	ID=cds.MS.gene66973.t1;Parent=MS.gene66973.t1
chr6.4	exon	4004359	4004416	4004359	ID=MS.gene66973.t1.exon12;Parent=MS.gene66973.t1
chr6.4	CDS	4004359	4004416	4004359	ID=cds.MS.gene66973.t1;Parent=MS.gene66973.t1
chr6.4	exon	4004689	4004757	4004689	ID=MS.gene66973.t1.exon13;Parent=MS.gene66973.t1
chr6.4	CDS	4004689	4004757	4004689	ID=cds.MS.gene66973.t1;Parent=MS.gene66973.t1

Gene Sequence

>MS.gene66973

ATGGCATACGGAATGCAATCGATGCTGAAAGAGGGTCACAAGCATCTCTCCGGTCTCGACGAAGCTGTTCTCAAGAACATCGATGCTTGCAAGCAGCTTTCTACTATCACCAGAACTTCTCTTGGCCCTAATGGTAACAATAATCATTTTCATAAATTTTTCGCAATTTTAGATGAATCCCAATTGAATACTGGTCTTTTAGATTCGAAAGTTTAGATTTTGATATGTGGGTATGGTTGATTTTGCATTTTTATCATGATCTAGCATTTTTCAGTGATCATGGTGTTTAGAATTAATTTTAGTTCATATGAAAATTTGTGTAGAATTGAAAAATAGTAGTAATTTTTAGTTGATTTTTTTGTTGTAATTTTATGCTAATCCAAATTGAATATTGTTCTTTTAGATTCGGAAAGTTTAGATTTTGATATGTGGGTATGGTTGATTTTGCATTTTTATGATGATCATAGTGCTTAAGAGTTAATTTTAGTATGAAAATTTGAAAAATAGCAATTTTTCATTTATGAAGAGATTTTTGTTCATGAGTGATCTTTCACCATTTCTTAGATTTTTTTTGTAATTTTTTATGAATCACAGTTGAATGTTTTTCTTTCAGATTCAGAAAGTTTAGATTTTGATATGTGGGTATGGTTGATTTTGCATTTTTATGATGATCTAGTGTTTTTCACTGAACAGGGTGGTTAGAGTTAATTTTAGTTTGTATGAAAATTTGTGAGAGATGAAAAAAAGTTTTTTTTTTTTTTTCATTTATGAAGGGAATTTGGGATCAGTGAATATAAAAACAGTAACGAAAATCACATTCACCATTTCTTAGTTTTTTTTTTTTACTTTTATGTTCGTCCCAATTGAAGATTTTTCTTTCAAATTTGAGAAGTTCAGATTTTGAAATGTAGTGGTTAGAGTTAATTTTAGTTCATATGAATATTGTGGAGAGTTGAAAAATAGTAAAAAAAAAAATCGTTTATGAAGAGAATTTGGGATTTATGATAAGTCTTTGATTGTTCATGAGTGAATTTTTGTACTGGACATAATGATTAGAGTTAGTTTTAGTTCATATCTGGAATGTCTTGTGCTTGAAAACATGCGGAGAATTGAAAAATACTATATTTTTTTTTTCATTTATGAAGAGAATTTGGGATTTATGATTGATTTTTTTTTGCATAAGTTAAATTTTTTAGTTCACTGTGTTTGCATAAGAAAGCGAATTGGATTGGAGAATGAACTGGTTTGGTTTGGCTAAATTTAGAATGGTGTTGTTGTACTGATGTGTTGTTTATTCTGCTTCAGGTATGAATAAAATGGTTATAAATCATTTGGACAAGCTTTTTGTCACGAATGATGCAGCGACAATTGTGAATGAACTTGAAGTTCAGCATCCTGCTGCCAAGATTTTGGTTTTGGCTAGTAAGGCTCAACAAGAGGAAATTGGGGATGGAGCAAATTTGACTATTTCGTTTGCTGGGGAGCTTTTGCAAGGTGCCGAGGAACTTATTAGGATGGGTTTGCATCCAAGCGAGATCATCATTGGATATACTAAAGCAATCAATAAGGTATGTTAGTTTTCTGATGAGCGCTTCAGTAGTGAGTCTAGCGACCAATGTTTTAAAACCTGGAATGGAGATTGGACTGGTGACTCCTCCAAATCGTGGTTCAGTTGATTCAATCGGTTCAACCATTTGAACTGGATGACATATAAATAAATTTTACGAGTATTATCAAAGTAAAATTATACGCAACAAAAACAGGTTGGATCACCTTGGTTCAACCGGTTTAACCCGATTCAATAAGACTACAATACAATCAGGATCAAACTACCGGGAAATGGGCTAGTAGTTACATCCGATTTTAAAACATTGGTATTGACTCACCTTCAAATGTCATACTATCTCTCTAACTCATTGTCATGTTTTAGACAGTTGAAATATTAGATGAACTGGTGGAGGAAGGCTCAGAGAATATGGATGTGCGTGATAAGGAACAAGTTATTTCTCGAATGAGAGCAGCAGTTGCTAGCAAGCAATTTGGTCAAGAGGATACCCTCTGCTCACTTATTGCTGATGTGAGTATATCCTGCTTGTCCCATTTTATTATGTTAAGATGCTTTGGTTGCAGCAGCACAGAGATTGAACATTCTTACTTTTGTTTCGAAAATACAGGCGTGCATCCAAGTGTGCCCAAAAAACCCTGCAAACTTTAATGTGGACAATGTTCGTGTTGCAAAGCTTTTGGGAGGGGGTTTACATAACAGTGCAGTTGTTCCGGGAATGGTTTTGAGAACTGATGCTGTTGGGAGCATAAAGCATACTGAAAAAGCAAAGGTTAGATCTTTATACACGCTGTCTTATTGGAGAGAGTTGATTCCAAGCTATGATCTCATGATTGCTTGCACTGTGGTATTAGAGTTTGTTGAGAATTTGAGAGAGAGAAAAGGTTCAATTGTAAACAGAATCGTTTTAATGGATCTCATGATTCTATTAAGTTTTAGGTGCGTGTAGAGCTAACAATTGAACACATGGACAGTTGTGAAAGCTGTCAAGCTAACTAGCTAGAACAAACTAGAACATAGAATATTCTAGAAGTCTTATTACCTATATCAGTAACGTCAGTGACATAAGCAGAAACATATCACATACTCTGTCATGTGTGCTCTTCATTCGTTCATTATTTTGACATTTTGATTAATGTGAAGGCTACGCTTTTTAGTTTTGGCTCGCTTTTTGGTAAATATTTAGGCAGTACATTTGGTTTTGGCCATTCGTATTTGCTTTTCGCATATTCTCCCATGACCCATCTAACGCCTTACGACTTACATGCAGTAAACAATGTTAAAAGTTATAATAATAAATGACTTTACAACAAACAACTAACATAGTGAGCCAAGTAGATAAGATGGAATAACTGAGATACATGGTGGTAAAAACAAATTTATTGAGTTGTTGCTTTGTTTAAAGATTGAATAACCGAGATACCAGGATCAACTATTTTCTCAAATTGATGTGTGGAGTTGTGGATGCTATTTTTATTTTACTGTGATTGTGAATTGTTTTCATTTTTAATCATAATTTATATAGGCTCTGATGAAGCTGTTTTCATTTTTAATTGCAAATATTACACCTTGCTTTCACTATTTGTATAGAAAACAATTTTAAAAAATTAAAATTGTTTTTACTTTTCCTATACAAATACGCAAGCATAAGATAAAGTGGTGGTATTTTTTGTAATTAAAAATGTGAATAAGAAATGAACTAAAATCATTTTCTGAAACCAAACGGCCACCAAGTAAGTATGAAAAATAGCTACTCTCTCACTTATTGTTGAATTCTAATGATTTTACCATCATGGCTTAAAATCTGTTTTTCTGTTTGTTTTGTTTGAATTTGATTAGAAATCATCAAGTCAATGCATCAATTTTTTTATCTTATCTCCATGAAATTTTACTGGCAGATTTTCATATTTTCTATTTACTGAGATCTTTTGTTAATGTTGTTTAAGGTTGCTGTGTTTGCTGGAGGTGTTGATACCTCTGCAACTGAAACTAAAGGAACTGTTCTCATACATTCAGCCGAGCAGGTATAGCAAATTGACTATTGAATTTGATTACTATAGATTTCTCTTTTCTTTTAACTGGTTGTGAAATTTATTCATTGTTATGAGTTATGAACCACTGACGCAGACACCAAACACGACACCAACATGTTGACTCCAATAACAATCCGAGAAAATGGAATTATTGAATGTAACCTATGTGTAAGTGTCGGTGTCAGGCAATGGACACGCCTTCAATTCGAAGTGTCGGTGCTACATAGGTTTTGAGTAAGGAGGCCTATTGATTTGTGTCTAGTGGTATAAGCTGCAGCTCCACCCCCATCCCACCCTACCCCCTGAATAAAGGCTAAAATAGGGTAACAAATCTATGTAGTGTTCCTGATCCCAAACTTGTCTATCATATGAAAATTGTATATCCTTGTCTGGAAGATATTAGCAGGTCATTGTCATTGTAGATTTGTGTCTAGTGGTATAAGCATGGAGTTTCTCGGATTATTCCTTTATTTGTTTGTACCTCCATCTATTTCTGATATGCTGGACATTTCTGTGGTGTTTTACTGTAAATTTCTTGCTAGAGCCTTTGCTTAGAAACTATTTGAAATATTCAAGCTTAAACTTGTAACACAATACGTTGGAAATTCCGCCGCCTTTATTGCGGTCCGCCCCTAGTCGCCTTAATTGCGGCCTTTGGTTTGCCTTCATTGCAGCCTCCAACACCTTCATTGTGTTGGCTTTAGGGGGGTGGATTTAGTCCCACATCGGATAGATAGGACTCTTGAGAAGAGTTTATAAAGAGGAGGCACTCCTCACCTTACGAACCGGTTTTGTAAGGATGAGTTGGTCCCCAAATTTCAACACAATATAGAAACAATTTTAAGATAATTTGTGCTATTGGTTTTTATCTATTACCTGATACTGTACTAATGGAGCTTAAGATTTCGACCAACATTTTCCTTTTATAGTTTATAATGAACTGTTTGCATTTTTCAAATTATTTGATGGTTTTGGTTATTGAATTTGTTTTACTTGTTTTGATTCATATAGCTAGAAAACTATTCAAAAACTGAAGAGGCTAAAGTAGAGGAGCTCATCAAGGCAGTAGCGGATTCTGGTGCGAAAGTGATTGTCAGTGGTGGAGCCGTAGGAGAGATGGCTTTGCATTTTTGCGAACGTTACAAGTGTGTGCAGTTTTTCCCTTTTTTGTTGTTTTAAATAATGTCTAATGCTATTTGATTTTTTTGTTAATATTGTCAGATGTTCTGTCAATTTGAAGCCGTGATATGTGTATTGTTTATTTTCTAACTTCAATATTCCTGCATGCAGACTTATGGTTTTGAAGATCAGTTCAAAGTTTGAACTACGTCGATTTTGCCGAACAACTGGTTCTGTCGCAATGGTTAGTGTTGTGCTTCTTTGGTTACATAGAGACTTTTGTTACGTTCTGCCTAATCCATTTTATTTTCCTCCTACAGCTGAAACTTTGCCAACCAAACCCAGATGATCTTGGATTTGCGGATTCTGTTTCAGTCGAGGAAATTGGTGGTGCCAGGGTAAGTTAACGAGATATTTTGTGTTCCGTTGTTTCCTTGTTTTCTTATGTAATTCTTTTTACAAGTATTGGCTTATTCCCTAACCTATTTTTGTTCTTATTTTAAGTGTGGCATATGATTTTCCCTTCTTTATGATATGATATACAGGTGACCATTGTGAAAAATGAAGTTGATGGAAATTCTGTGGCCACTGTGGTTTTACGAGGAAGTACCGATAGTATCCTAGATGATCTTGAAAGAGCTGTTGACGATGGAGTGAACACTTACAAGGTACTCCCTCCTGTCTTTAATATAAGTTAAAAATTGCTCATATATTTTGGTCTAATAAACAAATATAACTTCCGTTCACGCTAATAATTTATATCTTAAAATACATTTCAACTTTTGCGACTCATTTGTCATAGAACGAGTTTTAGAATACACTTTAATTTTTTATGAGATCAAGTGGATTCATTATAATTAACTAAATTTCTTAATAACTGTGAAGTTAGTTACTTTTGCCTCTGTAAACCGAAGAATTTATATCAATCGGGTTGAACTACGCTTCCAAAATGCATTTTTCTCTCAATAGTTGTTGCTAATTGTAATATTAATTGTAGATTAATCTTCTTCTGTTCAATTATTTGTCAGGCCATGTGCAGGGATAGCCGCATTGTACCTGGAGCTGCTGCAACTGAAATTGAATTAGCTAAAAGGGTGAAAGACTTTTCCTACAAGGAAACAGGGTACGTTGCATTTTGCTTAAGTTTTTCCTAAAAAAGACATGTGTTTTCAATGCGGGAATACACAAATTCATCTCTCATTCATTATTTGAGAATGTAATTTGATTGCTAGTTGCATATGGTTATGCTGTATTATTTCTGAATATATGCTTACATCTCCATCTGTGAGTATGGGGCAGTGGCTTAATTACATATCGGGATACAATTTAAGTATACCCTATGTAGCATCGACACTTCACATTGAAAGTTTCGGTGATTGACATTGAATCAGTTACATTCTCTTAAATTATTAAGGCATCTAAGTGACAGTGCATTGTCGTACCTGGTGTTTGTTTGTATCGGGGGCTTCATAGAGTATGCCTCAGTATTTACTATCATGATTAGTTTGTTGTGGTTCAATGCAATTTATTGGGTTGTATCGATATATTTTCTCACTAAAGTTTTTCCAAACTTTAGCTTAAAATTTTTAATGCAGAACTTTATCTTACAGATTATTACTTTGGAATTAGGCACCGTGTCTCTGCTTTAAGACATTATTTTTGTTTATTTAATAATCTTTTTTGATGGTTCTACAGATTGGATCAGTATGCTATTGCGAAATTTGCTGAAAGCTTTGAGATGATTCCAAGAACTTTGGCCGAGAATGCCGGGCTAAATGCAATGGAGATTATATCTTCTCTTTATGCAGAACATGCTAATGGAAATACCAAAGTTGGCATTGATTTGGAACCTGGTGTTTGTAAGGATGTCTCAACCATGAGGGTCTGGGATCTACATGTGACCAAGTAAGCTATTTTTTAATGCATGTTTTATATAAATAGATTTTTGAGCAAATAATGATCTTTTCCTAATTCATGAAACTAGATTTTTCTAATTATTTTTCATGTTGAATTAGACTTACCATATGGAATACTCGTTTGATAACATTGTCTTTTCTGCTCAGGTTATTTGCTCTTAAATATGCTACTGATGCTGCATGCACCGTACTACGAGTCGATCAGGTAATTATTCATTGACAACTCCTGATTGCCACCTTCAAAGCCCTTTTTCTTAAGATGTTATAAGTGATTTTTATAAGCTCTCAAACACTTCTGCAAGCACTTTTGTCATAAGATGAAACTTAAAAAGCCGTAAATTCCAAAATCGCCATTCTACGATTATTTCCAACAATTATTGCAAATACATACAGCTTATGTTAAGGGTGCAAGATTGTCATCTATTTTTCTTTGCATAGATTTATGGAGATTGTATTTTTTTTTTTTTATACTTTCAGATTATTATGTCAAAACCTGCTGGTGGCCCAAGGAGAGACCAACCTGCTCCTGGCATGGATGAAGACTAG

Protein sequence

>MS.gene66973.t1

MAYGMQSMLKEGHKHLSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKILVLASKAQQEEIGDGANLTISFAGELLQGAEELIRMGLHPSEIIIGYTKAINKTVEILDELVEEGSENMDVRDKEQVISRMRAAVASKQFGQEDTLCSLIADACIQVCPKNPANFNVDNVRVAKLLGGGLHNSAVVPGMVLRTDAVGSIKHTEKAKVAVFAGGVDTSATETKGTVLIHSAEQLENYSKTEEAKVEELIKAVADSGAKVIVSGGAVGEMALHFCERYKLMVLKISSKFELRRFCRTTGSVAMLKLCQPNPDDLGFADSVSVEEIGGARVTIVKNEVDGNSVATVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIELAKRVKDFSYKETGLDQYAIAKFAESFEMIPRTLAENAGLNAMEIISSLYAEHANGNTKVGIDLEPGVCKDVSTMRVWDLHVTKLFALKYATDAACTVLRVDQIIMSKPAGGPRRDQPAPGMDED