Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63032.t1 | XP_003626104.2 | 88.7 | 391 | 18 | 1 | 1 | 365 | 805 | 1195 | 3.90E-187 | 664.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63032.t1 | G7KVH9 | 88.7 | 391 | 18 | 1 | 1 | 365 | 805 | 1195 | 2.8e-187 | 664.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049255 | MS.gene63032 | 0.84839 | 6.32E-60 | -1.69E-46 |
| MS.gene049341 | MS.gene63032 | 0.818111 | 2.32E-52 | -1.69E-46 |
| MS.gene049807 | MS.gene63032 | 0.818765 | 1.65E-52 | -1.69E-46 |
| MS.gene049808 | MS.gene63032 | 0.815083 | 1.11E-51 | -1.69E-46 |
| MS.gene049821 | MS.gene63032 | 0.825218 | 5.28E-54 | -1.69E-46 |
| MS.gene049887 | MS.gene63032 | 0.819512 | 1.12E-52 | -1.69E-46 |
| MS.gene050020 | MS.gene63032 | 0.802406 | 5.70E-49 | -1.69E-46 |
| MS.gene050689 | MS.gene63032 | 0.866561 | 2.61E-65 | -1.69E-46 |
| MS.gene050807 | MS.gene63032 | 0.844128 | 9.16E-59 | -1.69E-46 |
| MS.gene050808 | MS.gene63032 | 0.817215 | 3.70E-52 | -1.69E-46 |
| MS.gene050838 | MS.gene63032 | 0.830616 | 2.66E-55 | -1.69E-46 |
| MS.gene050901 | MS.gene63032 | 0.806325 | 8.69E-50 | -1.69E-46 |
| MS.gene051003 | MS.gene63032 | 0.801593 | 8.37E-49 | -1.69E-46 |
| MS.gene051234 | MS.gene63032 | 0.826536 | 2.57E-54 | -1.69E-46 |
| MS.gene051328 | MS.gene63032 | 0.842494 | 2.50E-58 | -1.69E-46 |
| MS.gene05134 | MS.gene63032 | 0.826743 | 2.29E-54 | -1.69E-46 |
| MS.gene05157 | MS.gene63032 | 0.803814 | 2.91E-49 | -1.69E-46 |
| MS.gene051701 | MS.gene63032 | 0.822299 | 2.55E-53 | -1.69E-46 |
| MS.gene051719 | MS.gene63032 | 0.816688 | 4.86E-52 | -1.69E-46 |
| MS.gene051720 | MS.gene63032 | 0.817924 | 2.56E-52 | -1.69E-46 |
| MS.gene052133 | MS.gene63032 | 0.831084 | 2.04E-55 | -1.69E-46 |
| MS.gene052335 | MS.gene63032 | 0.811631 | 6.36E-51 | -1.69E-46 |
| MS.gene052516 | MS.gene63032 | 0.847571 | 1.06E-59 | -1.69E-46 |
| MS.gene052665 | MS.gene63032 | 0.824638 | 7.24E-54 | -1.69E-46 |
| MS.gene052947 | MS.gene63032 | 0.812876 | 3.40E-51 | -1.69E-46 |
| MS.gene053079 | MS.gene63032 | 0.823139 | 1.63E-53 | -1.69E-46 |
| MS.gene053122 | MS.gene63032 | 0.827886 | 1.22E-54 | -1.69E-46 |
| MS.gene053143 | MS.gene63032 | 0.801765 | 7.71E-49 | -1.69E-46 |
| MS.gene053144 | MS.gene63032 | 0.823647 | 1.24E-53 | -1.69E-46 |
| MS.gene053226 | MS.gene63032 | 0.802903 | 4.50E-49 | -1.69E-46 |
| MS.gene053563 | MS.gene63032 | 0.808226 | 3.44E-50 | -1.69E-46 |
| MS.gene053581 | MS.gene63032 | 0.839667 | 1.38E-57 | -1.69E-46 |
| MS.gene053599 | MS.gene63032 | 0.824364 | 8.40E-54 | -1.69E-46 |
| MS.gene05364 | MS.gene63032 | 0.835163 | 1.97E-56 | -1.69E-46 |
| MS.gene053678 | MS.gene63032 | 0.803621 | 3.19E-49 | -1.69E-46 |
| MS.gene053931 | MS.gene63032 | 0.802088 | 6.62E-49 | -1.69E-46 |
| MS.gene054584 | MS.gene63032 | 0.814796 | 1.28E-51 | -1.69E-46 |
| MS.gene054651 | MS.gene63032 | 0.80386 | 2.85E-49 | -1.69E-46 |
| MS.gene055465 | MS.gene63032 | 0.827615 | 1.42E-54 | -1.69E-46 |
| MS.gene055466 | MS.gene63032 | 0.829744 | 4.34E-55 | -1.69E-46 |
| MS.gene055468 | MS.gene63032 | 0.840442 | 8.67E-58 | -1.69E-46 |
| MS.gene055469 | MS.gene63032 | 0.8003 | 1.54E-48 | -1.69E-46 |
| MS.gene055512 | MS.gene63032 | 0.823927 | 1.06E-53 | -1.69E-46 |
| MS.gene055580 | MS.gene63032 | -0.827093 | 1.89E-54 | -1.69E-46 |
| MS.gene055891 | MS.gene63032 | 0.814408 | 1.56E-51 | -1.69E-46 |
| MS.gene055912 | MS.gene63032 | 0.818287 | 2.12E-52 | -1.69E-46 |
| MS.gene056005 | MS.gene63032 | 0.810971 | 8.84E-51 | -1.69E-46 |
| MS.gene056043 | MS.gene63032 | -0.820978 | 5.15E-53 | -1.69E-46 |
| MS.gene056308 | MS.gene63032 | 0.824827 | 6.53E-54 | -1.69E-46 |
| MS.gene057287 | MS.gene63032 | 0.804476 | 2.12E-49 | -1.69E-46 |
| MS.gene057694 | MS.gene63032 | 0.828474 | 8.81E-55 | -1.69E-46 |
| MS.gene057705 | MS.gene63032 | 0.869013 | 4.25E-66 | -1.69E-46 |
| MS.gene058008 | MS.gene63032 | 0.80374 | 3.02E-49 | -1.69E-46 |
| MS.gene058009 | MS.gene63032 | 0.815763 | 7.83E-52 | -1.69E-46 |
| MS.gene058054 | MS.gene63032 | 0.820959 | 5.21E-53 | -1.69E-46 |
| MS.gene058055 | MS.gene63032 | 0.822537 | 2.25E-53 | -1.69E-46 |
| MS.gene058852 | MS.gene63032 | 0.808505 | 3.00E-50 | -1.69E-46 |
| MS.gene05978 | MS.gene63032 | 0.850285 | 1.87E-60 | -1.69E-46 |
| MS.gene060194 | MS.gene63032 | 0.813199 | 2.89E-51 | -1.69E-46 |
| MS.gene060587 | MS.gene63032 | 0.849539 | 3.03E-60 | -1.69E-46 |
| MS.gene060603 | MS.gene63032 | 0.813375 | 2.64E-51 | -1.69E-46 |
| MS.gene061006 | MS.gene63032 | 0.815066 | 1.12E-51 | -1.69E-46 |
| MS.gene061100 | MS.gene63032 | 0.810879 | 9.26E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63032.t1 | MTR_7g111080 | 91.049 | 391 | 9 | 1 | 1 | 365 | 805 | 1195 | 0.0 | 712 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63032.t1 | AT5G24710 | 78.626 | 393 | 60 | 2 | 1 | 373 | 807 | 1195 | 0.0 | 595 |
Find 103 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATGCTACATCTGCATTTC+TGG | 0.140815 | 5.4:+44899591 | MS.gene63032:CDS |
| TTTCTTTACAAACTGGAAAA+TGG | 0.158036 | 5.4:-44899710 | None:intergenic |
| GAAATTCGCAAAAGAGTTCT+TGG | 0.260127 | 5.4:+44898121 | MS.gene63032:CDS |
| ACGTCCAACTCTGAAGAATT+TGG | 0.308953 | 5.4:+44899510 | MS.gene63032:CDS |
| AGATGTAGTTGAAGGTGTTC+AGG | 0.313871 | 5.4:+44898091 | MS.gene63032:intron |
| TCTCTGTAGCACTTGGTTCC+AGG | 0.315312 | 5.4:-44899539 | None:intergenic |
| CCATCAGCTCTAGATTGTTT+TGG | 0.325688 | 5.4:-44896365 | None:intergenic |
| TTCTTTACAAACTGGAAAAT+GGG | 0.326261 | 5.4:-44899709 | None:intergenic |
| AAAATAATTTCTTTACAAAC+TGG | 0.337493 | 5.4:-44899717 | None:intergenic |
| GGAGCCTAAGCTTACGAGTT+TGG | 0.340488 | 5.4:+44899624 | MS.gene63032:CDS |
| TGTCGAAGTCTTGCTGCTTA+TGG | 0.340624 | 5.4:+44897598 | MS.gene63032:CDS |
| GCTGCAGCTGGATCAGTTAA+AGG | 0.351981 | 5.4:+44898209 | MS.gene63032:CDS |
| TTCATTTCAGCATGCTCCTT+CGG | 0.357916 | 5.4:+44896322 | MS.gene63032:CDS |
| ATGAGTAATAGCCGGGATAT+TGG | 0.363619 | 5.4:+44897990 | MS.gene63032:CDS |
| GAGAAAGCATGGCAGGATAC+TGG | 0.378910 | 5.4:+44899377 | MS.gene63032:CDS |
| ACACGCCTCTTTGATATTCC+AGG | 0.391574 | 5.4:-44897815 | None:intergenic |
| ACCACAACAAGAGGCCCAAC+CGG | 0.393627 | 5.4:-44896497 | None:intergenic |
| AAAAGAAGCAGAGGAGAGAA+AGG | 0.399641 | 5.4:+44896403 | MS.gene63032:CDS |
| AGCACAATTTATGCTAGGAA+TGG | 0.416057 | 5.4:+44897766 | MS.gene63032:CDS |
| GAGCTGATGGTGACGACTCT+TGG | 0.422531 | 5.4:+44896378 | MS.gene63032:CDS |
| ATAATGTTAGTGCAGTAAAA+TGG | 0.424291 | 5.4:+44897623 | MS.gene63032:CDS |
| TCTTGTTGTGGTCGGTGTTA+AGG | 0.425751 | 5.4:+44896508 | MS.gene63032:CDS |
| GCATTGCGCCTTGCAAATCA+TGG | 0.426731 | 5.4:+44898263 | MS.gene63032:CDS |
| AACCTAATCACGCTTGGCTT+GGG | 0.431062 | 5.4:+44899305 | MS.gene63032:CDS |
| GTGTTAAGGATGGAGTTCTT+TGG | 0.432851 | 5.4:+44896522 | MS.gene63032:CDS |
| CAACCTAATCACGCTTGGCT+TGG | 0.434812 | 5.4:+44899304 | MS.gene63032:CDS |
| TGCATTTCTGGCTTCTCTTG+AGG | 0.437184 | 5.4:+44899603 | MS.gene63032:CDS |
| AACTCTGAAGAATTTGGTTC+AGG | 0.441960 | 5.4:+44899516 | MS.gene63032:CDS |
| GAGTTCTTTGGCTAATTGAC+AGG | 0.448045 | 5.4:+44896534 | MS.gene63032:CDS |
| GCACAATTTATGCTAGGAAT+GGG | 0.449349 | 5.4:+44897767 | MS.gene63032:CDS |
| AAGACTTCGACAGCGAATAC+CGG | 0.456528 | 5.4:-44897587 | None:intergenic |
| GTCCCAAGCCAAGCGTGATT+AGG | 0.457067 | 5.4:-44899307 | None:intergenic |
| TGAAGAATTTGGTTCAGGCC+TGG | 0.464615 | 5.4:+44899521 | MS.gene63032:CDS |
| CCCGGAGGTAGGATTTCAAT+AGG | 0.466933 | 5.4:-44899667 | None:intergenic |
| CTGAAGAGGTTAGCTGCAGC+TGG | 0.467189 | 5.4:+44898197 | MS.gene63032:CDS |
| ACAGAAGCACTTCATTTGCC+TGG | 0.467479 | 5.4:+44897797 | MS.gene63032:CDS |
| CTTACGAGTTTGGCAGATGC+AGG | 0.470423 | 5.4:+44899634 | MS.gene63032:CDS |
| CGCTGCAGATGCTACAGGAC+AGG | 0.471467 | 5.4:+44898154 | MS.gene63032:CDS |
| ACCTATTGAAATCCTACCTC+CGG | 0.472443 | 5.4:+44899666 | MS.gene63032:CDS |
| CTTTACAAGGTCATGAATTG+AGG | 0.474786 | 5.4:+44898234 | MS.gene63032:CDS |
| TCCGGTTGGGCCTCTTGTTG+TGG | 0.485814 | 5.4:+44896496 | MS.gene63032:CDS |
| GATGTAGTTGAAGGTGTTCA+GGG | 0.488910 | 5.4:+44898092 | MS.gene63032:intron |
| TGGAGCAGAAACGTCCGGTT+GGG | 0.489410 | 5.4:+44896483 | MS.gene63032:CDS |
| CAACCTCTCTCTGTAGCACT+TGG | 0.489881 | 5.4:-44899546 | None:intergenic |
| TGAACCAAATTCTTCAGAGT+TGG | 0.495507 | 5.4:-44899514 | None:intergenic |
| TCAAACAGGGCAAGTAGGCT+TGG | 0.498847 | 5.4:+44897722 | MS.gene63032:intron |
| ATAAACAACCTAATCACGCT+TGG | 0.500648 | 5.4:+44899299 | MS.gene63032:CDS |
| TTCTTACCATGAGTAATAGC+CGG | 0.503075 | 5.4:+44897982 | MS.gene63032:CDS |
| CCTATTCTAGATGGTCCGAT+TGG | 0.504312 | 5.4:+44896298 | None:intergenic |
| TCTTACCATGAGTAATAGCC+GGG | 0.504763 | 5.4:+44897983 | MS.gene63032:CDS |
| ATTGACGCTGCAGATGCTAC+AGG | 0.518544 | 5.4:+44898149 | MS.gene63032:CDS |
| GAAATAGCGGTTGGTGGAGG+AGG | 0.521857 | 5.4:+44896431 | MS.gene63032:CDS |
| CTAACCTCTTCAGAGCTTCA+CGG | 0.524329 | 5.4:-44898187 | None:intergenic |
| AGACTTCGACAGCGAATACC+GGG | 0.525157 | 5.4:-44897586 | None:intergenic |
| TCAGTTAAAGGTGCTTTACA+AGG | 0.528069 | 5.4:+44898221 | MS.gene63032:CDS |
| GATTTAGCACAATTTATGCT+AGG | 0.528425 | 5.4:+44897761 | MS.gene63032:CDS |
| CCAAAACAATCTAGAGCTGA+TGG | 0.530123 | 5.4:+44896365 | MS.gene63032:CDS |
| TCCGATGGAGCAGAAACGTC+CGG | 0.531504 | 5.4:+44896478 | MS.gene63032:CDS |
| CCTATTGAAATCCTACCTCC+GGG | 0.533692 | 5.4:+44899667 | MS.gene63032:CDS |
| ATGGCAGGATACTGGAATGA+TGG | 0.541037 | 5.4:+44899385 | MS.gene63032:CDS |
| ACCGGACGTTTCTGCTCCAT+CGG | 0.542874 | 5.4:-44896479 | None:intergenic |
| TCTGCCAAACTCGTAAGCTT+AGG | 0.543670 | 5.4:-44899628 | None:intergenic |
| AGTGAAATAGCGGTTGGTGG+AGG | 0.545934 | 5.4:+44896428 | MS.gene63032:CDS |
| GCCTTATCTTTGAGTCATCC+CGG | 0.546193 | 5.4:+44897568 | MS.gene63032:CDS |
| TAATCACGCTTGGCTTGGGA+CGG | 0.550062 | 5.4:+44899309 | MS.gene63032:CDS |
| GATAGGAAAGGTGGCACCGA+AGG | 0.552730 | 5.4:-44896338 | None:intergenic |
| GCATTAAGTGACATCATCCC+CGG | 0.555983 | 5.4:-44899685 | None:intergenic |
| CATGCTGAAATGAAGCCAAT+CGG | 0.559930 | 5.4:-44896313 | None:intergenic |
| ATGGAGCAGAAACGTCCGGT+TGG | 0.563286 | 5.4:+44896482 | MS.gene63032:CDS |
| CAAATCATGGAGAGTTGACT+CGG | 0.565410 | 5.4:+44898276 | MS.gene63032:CDS |
| TCTTTACAAACTGGAAAATG+GGG | 0.566609 | 5.4:-44899708 | None:intergenic |
| AATATCCCGGCTATTACTCA+TGG | 0.566782 | 5.4:-44897988 | None:intergenic |
| TAACCTCTTCAGAGCTTCAC+GGG | 0.567211 | 5.4:-44898186 | None:intergenic |
| GTTGGGCCTCTTGTTGTGGT+CGG | 0.567755 | 5.4:+44896500 | MS.gene63032:CDS |
| GCAAGTGAAATAGCGGTTGG+TGG | 0.570809 | 5.4:+44896425 | MS.gene63032:CDS |
| TCTAATGGAGAAAGCATGGC+AGG | 0.571254 | 5.4:+44899370 | MS.gene63032:CDS |
| TGGTGGAGGAGGCGTGTCTG+TGG | 0.573140 | 5.4:+44896442 | MS.gene63032:CDS |
| AATCACGCTTGGCTTGGGAC+GGG | 0.574767 | 5.4:+44899310 | MS.gene63032:CDS |
| TTTGGTAATGATAGGAAAGG+TGG | 0.581242 | 5.4:-44896347 | None:intergenic |
| TTTACAAGGTCATGAATTGA+GGG | 0.581412 | 5.4:+44898235 | MS.gene63032:CDS |
| GAACCAAGTGCTACAGAGAG+AGG | 0.584065 | 5.4:+44899543 | MS.gene63032:CDS |
| GTGACATCATCCCCGGAGGT+AGG | 0.584348 | 5.4:-44899678 | None:intergenic |
| GTTGTGGTCGGTGTTAAGGA+TGG | 0.585013 | 5.4:+44896512 | MS.gene63032:CDS |
| ACCGGGATGACTCAAAGATA+AGG | 0.586920 | 5.4:-44897569 | None:intergenic |
| TCAACTCTCCATGATTTGCA+AGG | 0.594298 | 5.4:-44898271 | None:intergenic |
| ATGCTCTAATGGAGAAAGCA+TGG | 0.596377 | 5.4:+44899366 | MS.gene63032:CDS |
| TACCACCGTGTCCAATATCC+CGG | 0.596772 | 5.4:-44898001 | None:intergenic |
| GGATACTGGAATGATGGCAG+AGG | 0.598475 | 5.4:+44899391 | MS.gene63032:CDS |
| TTAACACCGACCACAACAAG+AGG | 0.603163 | 5.4:-44896506 | None:intergenic |
| CTTTACAAACTGGAAAATGG+GGG | 0.605788 | 5.4:-44899707 | None:intergenic |
| TTGCCCGTGAAGCTCTGAAG+AGG | 0.612343 | 5.4:+44898183 | MS.gene63032:CDS |
| CTCTTGGACAAAAGAAGCAG+AGG | 0.614325 | 5.4:+44896394 | MS.gene63032:CDS |
| GCTGCAGATGCTACAGGACA+GGG | 0.620829 | 5.4:+44898155 | MS.gene63032:CDS |
| AAGGCAAGTGAAATAGCGGT+TGG | 0.623924 | 5.4:+44896422 | MS.gene63032:CDS |
| GGAGGTAGGATTTCAATAGG+TGG | 0.635234 | 5.4:-44899664 | None:intergenic |
| GAGAAAGGCAAGTGAAATAG+CGG | 0.642053 | 5.4:+44896418 | MS.gene63032:CDS |
| ATTTGCCTGGAATATCAAAG+AGG | 0.651864 | 5.4:+44897810 | MS.gene63032:CDS |
| TTACAAGGTCATGAATTGAG+GGG | 0.654271 | 5.4:+44898236 | MS.gene63032:CDS |
| AATAGCCGGGATATTGGACA+CGG | 0.707492 | 5.4:+44897996 | MS.gene63032:CDS |
| TAAATTGTGCTAAATCATCG+TGG | 0.722125 | 5.4:-44897754 | None:intergenic |
| AGCCGGGATATTGGACACGG+TGG | 0.728369 | 5.4:+44897999 | MS.gene63032:CDS |
| CTATTGAAATCCTACCTCCG+GGG | 0.739256 | 5.4:+44899668 | MS.gene63032:CDS |
| TTAAGTGACATCATCCCCGG+AGG | 0.749186 | 5.4:-44899682 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATAAAAATGCATTAA+AGG | + | chr5.4:44896681-44896700 | MS.gene63032:intron | 10.0% |
| !! | AAAATAATTTCTTTACAAAC+TGG | - | chr5.4:44899720-44899739 | None:intergenic | 15.0% |
| !!! | AAGTTTATGTTTTAATCATA+AGG | + | chr5.4:44899202-44899221 | MS.gene63032:intron | 15.0% |
| !!! | ACATTATATTTTTTCAAACA+GGG | + | chr5.4:44897709-44897728 | MS.gene63032:intron | 15.0% |
| !!! | AGATCATTGTTTATTTTATT+CGG | + | chr5.4:44897071-44897090 | MS.gene63032:intron | 15.0% |
| !!! | ATGATCTAGTTTTATTAAAT+TGG | - | chr5.4:44898379-44898398 | None:intergenic | 15.0% |
| !! | AAAAAATAAGATGTAGTTGA+AGG | + | chr5.4:44898083-44898102 | MS.gene63032:intron | 20.0% |
| !! | AAATAAAAAGCCATTGAATA+TGG | - | chr5.4:44896856-44896875 | None:intergenic | 20.0% |
| !! | AATAAATATGAAAAGAGAGA+AGG | - | chr5.4:44897658-44897677 | None:intergenic | 20.0% |
| !! | ACTAATTGATCTAAAAAGAA+AGG | - | chr5.4:44899160-44899179 | None:intergenic | 20.0% |
| !! | ACTACAAATACTAAATAAAG+TGG | - | chr5.4:44899462-44899481 | None:intergenic | 20.0% |
| !! | ATAAACACTTCTATAATTCT+AGG | - | chr5.4:44898526-44898545 | None:intergenic | 20.0% |
| !! | TAAACACTTCTATAATTCTA+GGG | - | chr5.4:44898525-44898544 | None:intergenic | 20.0% |
| !!! | AAATAGTATTTGAAGCTATT+AGG | - | chr5.4:44896802-44896821 | None:intergenic | 20.0% |
| !!! | AATAGTATTTGAAGCTATTA+GGG | - | chr5.4:44896801-44896820 | None:intergenic | 20.0% |
| !!! | ATAATTTTTTTTGAACAAGC+AGG | - | chr5.4:44898436-44898455 | None:intergenic | 20.0% |
| !!! | CACATTATATTTTTTCAAAC+AGG | + | chr5.4:44897708-44897727 | MS.gene63032:intron | 20.0% |
| !!! | CATAGTTTTGTATCATTTTT+GGG | + | chr5.4:44898905-44898924 | MS.gene63032:intron | 20.0% |
| ! | AAATAAACAATGATCTCTCT+TGG | - | chr5.4:44897067-44897086 | None:intergenic | 25.0% |
| ! | AAATATGGAAGAATGTTTGT+AGG | + | chr5.4:44898692-44898711 | MS.gene63032:intron | 25.0% |
| ! | AATAAACAATGATCTCTCTT+GGG | - | chr5.4:44897066-44897085 | None:intergenic | 25.0% |
| ! | AATCAAATGTCCTTATAAAG+AGG | + | chr5.4:44897015-44897034 | MS.gene63032:intron | 25.0% |
| ! | ATAATAGGAATCAATCTATG+TGG | - | chr5.4:44898949-44898968 | None:intergenic | 25.0% |
| ! | ATAATGTTAGTGCAGTAAAA+TGG | + | chr5.4:44897623-44897642 | MS.gene63032:CDS | 25.0% |
| ! | ATACTGTAAAAGCAATTCAT+TGG | - | chr5.4:44899016-44899035 | None:intergenic | 25.0% |
| ! | ATCAAATGTCCTTATAAAGA+GGG | + | chr5.4:44897016-44897035 | MS.gene63032:intron | 25.0% |
| ! | ATTGCTGTACAACAAATAAT+AGG | - | chr5.4:44898964-44898983 | None:intergenic | 25.0% |
| ! | CCAAAAATGATACAAAACTA+TGG | - | chr5.4:44898907-44898926 | None:intergenic | 25.0% |
| ! | TAATGCATGAAACACATTAA+TGG | + | chr5.4:44896916-44896935 | MS.gene63032:intron | 25.0% |
| ! | TACTGTAAAAGCAATTCATT+GGG | - | chr5.4:44899015-44899034 | None:intergenic | 25.0% |
| ! | TCGTTATACTTATAGAAGAA+AGG | + | chr5.4:44898551-44898570 | MS.gene63032:intron | 25.0% |
| ! | TCTAAATCTAATAGGAACAA+TGG | - | chr5.4:44898793-44898812 | None:intergenic | 25.0% |
| ! | TTATATGATTATCTCCTTTG+AGG | + | chr5.4:44896961-44896980 | MS.gene63032:intron | 25.0% |
| ! | TTCAAAACATCCATATTCAA+TGG | + | chr5.4:44896843-44896862 | MS.gene63032:intron | 25.0% |
| ! | TTCTTTACAAACTGGAAAAT+GGG | - | chr5.4:44899712-44899731 | None:intergenic | 25.0% |
| ! | TTTCTTTACAAACTGGAAAA+TGG | - | chr5.4:44899713-44899732 | None:intergenic | 25.0% |
| !!! | ATATATCGATTTCAAGTTCA+AGG | + | chr5.4:44897467-44897486 | MS.gene63032:intron | 25.0% |
| !!! | ATCTAGTGATATTGGTTTAA+TGG | + | chr5.4:44899097-44899116 | MS.gene63032:intron | 25.0% |
| !!! | ATGTTTTGAACATTTAGTAG+AGG | - | chr5.4:44896833-44896852 | None:intergenic | 25.0% |
| !!! | CCATAGTTTTGTATCATTTT+TGG | + | chr5.4:44898904-44898923 | MS.gene63032:intron | 25.0% |
| !!! | TAGATTGTTTTGGTAATGAT+AGG | - | chr5.4:44896358-44896377 | None:intergenic | 25.0% |
| !!! | TGAATTGCTTTTACAGTATT+TGG | + | chr5.4:44899017-44899036 | MS.gene63032:intron | 25.0% |
| !!! | TTCTCTGTGTTATTTAACAT+GGG | + | chr5.4:44897432-44897451 | MS.gene63032:intron | 25.0% |
| !!! | TTTCTCTGTGTTATTTAACA+TGG | + | chr5.4:44897431-44897450 | MS.gene63032:intron | 25.0% |
| AAACCACGTCTAAATCTAAT+AGG | - | chr5.4:44898801-44898820 | None:intergenic | 30.0% | |
| AAGCACATTGTTTGAGTAAA+AGG | + | chr5.4:44899120-44899139 | MS.gene63032:intron | 30.0% | |
| AATGACCAATCAGAAATGAA+GGG | + | chr5.4:44898653-44898672 | MS.gene63032:intron | 30.0% | |
| ACATTAATGGCTTTCACATT+GGG | + | chr5.4:44896929-44896948 | MS.gene63032:intron | 30.0% | |
| AGAATGATACTACTAATACC+TGG | + | chr5.4:44897519-44897538 | MS.gene63032:intron | 30.0% | |
| AGTATTACATTATGCACTAC+AGG | + | chr5.4:44899271-44899290 | MS.gene63032:intron | 30.0% | |
| ATAAACAATGATCTCTCTTG+GGG | - | chr5.4:44897065-44897084 | None:intergenic | 30.0% | |
| ATTAAGAGAATCAACCTCAA+AGG | - | chr5.4:44896978-44896997 | None:intergenic | 30.0% | |
| CCAATATCACTAGATAATCA+TGG | - | chr5.4:44899092-44899111 | None:intergenic | 30.0% | |
| CCATGATTATCTAGTGATAT+TGG | + | chr5.4:44899089-44899108 | MS.gene63032:intron | 30.0% | |
| GAATGACATGTATATTGTAG+TGG | - | chr5.4:44898868-44898887 | None:intergenic | 30.0% | |
| GATTTAGCACAATTTATGCT+AGG | + | chr5.4:44897761-44897780 | MS.gene63032:CDS | 30.0% | |
| GTATATAAATACAGCCTTCT+GGG | - | chr5.4:44896658-44896677 | None:intergenic | 30.0% | |
| GTATTACATTATGCACTACA+GGG | + | chr5.4:44899272-44899291 | MS.gene63032:intron | 30.0% | |
| TAAAGAGAGAGAAATACTGA+TGG | + | chr5.4:44898623-44898642 | MS.gene63032:intron | 30.0% | |
| TAAATTGTGCTAAATCATCG+TGG | - | chr5.4:44897757-44897776 | None:intergenic | 30.0% | |
| TATTTCTTTACTCCTTACGT+TGG | + | chr5.4:44897886-44897905 | MS.gene63032:intron | 30.0% | |
| TCAAATGTCCTTATAAAGAG+GGG | + | chr5.4:44897017-44897036 | MS.gene63032:intron | 30.0% | |
| TCTTTACAAACTGGAAAATG+GGG | - | chr5.4:44899711-44899730 | None:intergenic | 30.0% | |
| TGATTAAAATTGCAAGCTCT+TGG | - | chr5.4:44897854-44897873 | None:intergenic | 30.0% | |
| TTTACAAGGTCATGAATTGA+GGG | + | chr5.4:44898235-44898254 | MS.gene63032:CDS | 30.0% | |
| ! | ATTTTATATCCTGTTCACAC+TGG | - | chr5.4:44898725-44898744 | None:intergenic | 30.0% |
| ! | CATTATATTTTTCACCCAGA+AGG | + | chr5.4:44896641-44896660 | MS.gene63032:intron | 30.0% |
| ! | TTTTCCAATCCACTAATTTC+TGG | + | chr5.4:44898331-44898350 | MS.gene63032:intron | 30.0% |
| !! | TTATTTGTTGTACAGCAATG+AGG | + | chr5.4:44898965-44898984 | MS.gene63032:intron | 30.0% |
| !!! | AATTGCTTTTGAAACAGAGT+TGG | + | chr5.4:44897153-44897172 | MS.gene63032:intron | 30.0% |
| !!! | GATCTTCTCTGTTATTTTCT+CGG | - | chr5.4:44896610-44896629 | None:intergenic | 30.0% |
| !!! | TGTTTTGGTAATGATAGGAA+AGG | - | chr5.4:44896353-44896372 | None:intergenic | 30.0% |
| !!! | TTAGACGTGGTTTTATTCTT+TGG | + | chr5.4:44898808-44898827 | MS.gene63032:intron | 30.0% |
| ACACGTAGGATTGGAAATTT+AGG | - | chr5.4:44896736-44896755 | None:intergenic | 35.0% | |
| AGATGTGTGATGCACTTAAA+GGG | + | chr5.4:44897192-44897211 | MS.gene63032:intron | 35.0% | |
| AGCACAATTTATGCTAGGAA+TGG | + | chr5.4:44897766-44897785 | MS.gene63032:CDS | 35.0% | |
| ATAAACAACCTAATCACGCT+TGG | + | chr5.4:44899299-44899318 | MS.gene63032:CDS | 35.0% | |
| ATCAAACAGCCAGAAATTAG+TGG | - | chr5.4:44898343-44898362 | None:intergenic | 35.0% | |
| ATGACCAATCAGAAATGAAG+GGG | + | chr5.4:44898654-44898673 | MS.gene63032:intron | 35.0% | |
| ATTAATGGCTTTCACATTGG+GGG | + | chr5.4:44896931-44896950 | MS.gene63032:intron | 35.0% | |
| ATTTGCCTGGAATATCAAAG+AGG | + | chr5.4:44897810-44897829 | MS.gene63032:CDS | 35.0% | |
| CAAATGTCCTTATAAAGAGG+GGG | + | chr5.4:44897018-44897037 | MS.gene63032:intron | 35.0% | |
| CACATTAATGGCTTTCACAT+TGG | + | chr5.4:44896928-44896947 | MS.gene63032:intron | 35.0% | |
| CATGTGCCTGAAAAACAAAA+AGG | - | chr5.4:44899489-44899508 | None:intergenic | 35.0% | |
| CATTAAAGCGAATGAGAGAA+CGG | - | chr5.4:44896901-44896920 | None:intergenic | 35.0% | |
| CATTAATGGCTTTCACATTG+GGG | + | chr5.4:44896930-44896949 | MS.gene63032:intron | 35.0% | |
| CGTATATAAATACAGCCTTC+TGG | - | chr5.4:44896659-44896678 | None:intergenic | 35.0% | |
| CTTTACAAACTGGAAAATGG+GGG | - | chr5.4:44899710-44899729 | None:intergenic | 35.0% | |
| CTTTACAAGGTCATGAATTG+AGG | + | chr5.4:44898234-44898253 | MS.gene63032:CDS | 35.0% | |
| GAAATTCGCAAAAGAGTTCT+TGG | + | chr5.4:44898121-44898140 | MS.gene63032:CDS | 35.0% | |
| GAATGACCAATCAGAAATGA+AGG | + | chr5.4:44898652-44898671 | MS.gene63032:intron | 35.0% | |
| GCACAATTTATGCTAGGAAT+GGG | + | chr5.4:44897767-44897786 | MS.gene63032:CDS | 35.0% | |
| GCTGGAAATTAAAAGCCAAT+AGG | - | chr5.4:44896762-44896781 | None:intergenic | 35.0% | |
| GGAATCAATCTATGTGGTAA+AGG | - | chr5.4:44898943-44898962 | None:intergenic | 35.0% | |
| GTTCCTATTAGATTTAGACG+TGG | + | chr5.4:44898795-44898814 | MS.gene63032:intron | 35.0% | |
| GTTGGAATCTTTCTTTGACT+AGG | + | chr5.4:44898987-44899006 | MS.gene63032:intron | 35.0% | |
| TACTACTAATACCTGGATTG+TGG | + | chr5.4:44897526-44897545 | MS.gene63032:intron | 35.0% | |
| TATTCGGATGAATGTTGTCA+TGG | + | chr5.4:44897087-44897106 | MS.gene63032:intron | 35.0% | |
| TCTTGTGTAAAAACAGGGTA+AGG | - | chr5.4:44897292-44897311 | None:intergenic | 35.0% | |
| TGAACCAAATTCTTCAGAGT+TGG | - | chr5.4:44899517-44899536 | None:intergenic | 35.0% | |
| TGGCTAATTGACAGGTAATT+TGG | + | chr5.4:44896542-44896561 | MS.gene63032:intron | 35.0% | |
| TTACAAGGTCATGAATTGAG+GGG | + | chr5.4:44898236-44898255 | MS.gene63032:CDS | 35.0% | |
| TTCCAGCAGTGACTATTTAA+TGG | + | chr5.4:44896775-44896794 | MS.gene63032:intron | 35.0% | |
| TTCTTACCATGAGTAATAGC+CGG | + | chr5.4:44897982-44898001 | MS.gene63032:CDS | 35.0% | |
| TTGGACTTCTTACTTTCGAT+TGG | + | chr5.4:44896561-44896580 | MS.gene63032:intron | 35.0% | |
| ! | AACTCTGAAGAATTTGGTTC+AGG | + | chr5.4:44899516-44899535 | MS.gene63032:CDS | 35.0% |
| ! | ACACTTCTATAATTCTAGGG+TGG | - | chr5.4:44898522-44898541 | None:intergenic | 35.0% |
| ! | ATTCAAGAAAGCACGTGATT+AGG | + | chr5.4:44897127-44897146 | MS.gene63032:intron | 35.0% |
| !! | TCAGTTAAAGGTGCTTTACA+AGG | + | chr5.4:44898221-44898240 | MS.gene63032:CDS | 35.0% |
| !! | TTTGGTAATGATAGGAAAGG+TGG | - | chr5.4:44896350-44896369 | None:intergenic | 35.0% |
| !!! | CTTTTTGTTTTTCAGGCACA+TGG | + | chr5.4:44899487-44899506 | MS.gene63032:intron | 35.0% |
| !!! | GTCTGACCTTTTTGTTTTTC+AGG | + | chr5.4:44899480-44899499 | MS.gene63032:intron | 35.0% |
| !!! | TTACCCTGTTTTTACACAAG+AGG | + | chr5.4:44897291-44897310 | MS.gene63032:intron | 35.0% |
| !!! | TTTTTTCAAACAGGGCAAGT+AGG | + | chr5.4:44897717-44897736 | MS.gene63032:intron | 35.0% |
| AAAAGAAGCAGAGGAGAGAA+AGG | + | chr5.4:44896403-44896422 | MS.gene63032:CDS | 40.0% | |
| AATAGGACTACACGTAGGAT+TGG | - | chr5.4:44896745-44896764 | None:intergenic | 40.0% | |
| AATATCCCGGCTATTACTCA+TGG | - | chr5.4:44897991-44898010 | None:intergenic | 40.0% | |
| AATCCCCCTTCATTTCTGAT+TGG | - | chr5.4:44898661-44898680 | None:intergenic | 40.0% | |
| AATCCTACGTGTAGTCCTAT+TGG | + | chr5.4:44896744-44896763 | MS.gene63032:intron | 40.0% | |
| AATGAGAGAACGGAAAGTTC+AGG | - | chr5.4:44896891-44896910 | None:intergenic | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | - | chr5.4:44897298-44897317 | None:intergenic | 40.0% | |
| ACCTATTGAAATCCTACCTC+CGG | + | chr5.4:44899666-44899685 | MS.gene63032:CDS | 40.0% | |
| ACTAATACCTGGATTGTGGT+AGG | + | chr5.4:44897530-44897549 | MS.gene63032:intron | 40.0% | |
| ATCAGAAATGAAGGGGGATT+AGG | + | chr5.4:44898661-44898680 | MS.gene63032:intron | 40.0% | |
| ATGAGTAATAGCCGGGATAT+TGG | + | chr5.4:44897990-44898009 | MS.gene63032:CDS | 40.0% | |
| ATGCTCTAATGGAGAAAGCA+TGG | + | chr5.4:44899366-44899385 | MS.gene63032:CDS | 40.0% | |
| CAAATCATGGAGAGTTGACT+CGG | + | chr5.4:44898276-44898295 | MS.gene63032:CDS | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | - | chr5.4:44897297-44897316 | None:intergenic | 40.0% | |
| CATGCTGAAATGAAGCCAAT+CGG | - | chr5.4:44896316-44896335 | None:intergenic | 40.0% | |
| CGCATTGTCTATTCACTACA+AGG | - | chr5.4:44899045-44899064 | None:intergenic | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr5.4:44897266-44897285 | None:intergenic | 40.0% | |
| GAGAAAGGCAAGTGAAATAG+CGG | + | chr5.4:44896418-44896437 | MS.gene63032:CDS | 40.0% | |
| GAGATGTGTGATGCACTTAA+AGG | + | chr5.4:44897191-44897210 | MS.gene63032:intron | 40.0% | |
| GAGTTCTTTGGCTAATTGAC+AGG | + | chr5.4:44896534-44896553 | MS.gene63032:CDS | 40.0% | |
| GATTAGGGGGTAGGAAAATA+TGG | + | chr5.4:44898677-44898696 | MS.gene63032:intron | 40.0% | |
| GTCATGTGACTGTAAAGTCA+CGG | - | chr5.4:44897336-44897355 | None:intergenic | 40.0% | |
| GTGTTAAGGATGGAGTTCTT+TGG | + | chr5.4:44896522-44896541 | MS.gene63032:CDS | 40.0% | |
| TAAGTGCATCACACATCTGA+GGG | - | chr5.4:44897388-44897407 | None:intergenic | 40.0% | |
| TCAGAAATGAAGGGGGATTA+GGG | + | chr5.4:44898662-44898681 | MS.gene63032:intron | 40.0% | |
| TCATGTGACTGTAAAGTCAC+GGG | - | chr5.4:44897335-44897354 | None:intergenic | 40.0% | |
| TCTTACCATGAGTAATAGCC+GGG | + | chr5.4:44897983-44898002 | MS.gene63032:CDS | 40.0% | |
| TGACCAATCAGAAATGAAGG+GGG | + | chr5.4:44898655-44898674 | MS.gene63032:intron | 40.0% | |
| TGATGCTACATCTGCATTTC+TGG | + | chr5.4:44899591-44899610 | MS.gene63032:CDS | 40.0% | |
| TTAAGTGCATCACACATCTG+AGG | - | chr5.4:44897389-44897408 | None:intergenic | 40.0% | |
| TTAATGGCTTTCACATTGGG+GGG | + | chr5.4:44896932-44896951 | MS.gene63032:intron | 40.0% | |
| TTCATTTCAGCATGCTCCTT+CGG | + | chr5.4:44896322-44896341 | MS.gene63032:CDS | 40.0% | |
| TTGTTGTACAGCAATGAGGT+TGG | + | chr5.4:44898969-44898988 | MS.gene63032:intron | 40.0% | |
| ! | ACAGCCAGAAATTAGTGGAT+TGG | - | chr5.4:44898338-44898357 | None:intergenic | 40.0% |
| ! | ACGTCCAACTCTGAAGAATT+TGG | + | chr5.4:44899510-44899529 | MS.gene63032:CDS | 40.0% |
| ! | ATTGACTCCCCCTCTTTATA+AGG | - | chr5.4:44897028-44897047 | None:intergenic | 40.0% |
| ! | CCAAAACAATCTAGAGCTGA+TGG | + | chr5.4:44896365-44896384 | MS.gene63032:CDS | 40.0% |
| ! | GTAGCATCAGTCTTTTGTGA+TGG | - | chr5.4:44899580-44899599 | None:intergenic | 40.0% |
| ! | TCAACTCTCCATGATTTGCA+AGG | - | chr5.4:44898274-44898293 | None:intergenic | 40.0% |
| ! | TCTGGCTGTTTGATGCATTT+TGG | + | chr5.4:44898349-44898368 | MS.gene63032:intron | 40.0% |
| ! | TTTGAACAAGCAGGCTTTAG+TGG | - | chr5.4:44898427-44898446 | None:intergenic | 40.0% |
| !! | AGATGTAGTTGAAGGTGTTC+AGG | + | chr5.4:44898091-44898110 | MS.gene63032:intron | 40.0% |
| !! | GATGTAGTTGAAGGTGTTCA+GGG | + | chr5.4:44898092-44898111 | MS.gene63032:intron | 40.0% |
| !! | TCAGTCTTTTGTGATGGAGT+AGG | - | chr5.4:44899574-44899593 | None:intergenic | 40.0% |
| !! | TGCATTTTCTGCTGCTGTTT+TGG | + | chr5.4:44899337-44899356 | MS.gene63032:CDS | 40.0% |
| !!! | ACAAATGCCATTTTGCACAC+GGG | - | chr5.4:44899069-44899088 | None:intergenic | 40.0% |
| !!! | ATTTTCTGCTGCTGTTTTGG+GGG | + | chr5.4:44899340-44899359 | MS.gene63032:CDS | 40.0% |
| !!! | CATTTTCTGCTGCTGTTTTG+GGG | + | chr5.4:44899339-44899358 | MS.gene63032:CDS | 40.0% |
| !!! | CCATCAGCTCTAGATTGTTT+TGG | - | chr5.4:44896368-44896387 | None:intergenic | 40.0% |
| !!! | GACAAATGCCATTTTGCACA+CGG | - | chr5.4:44899070-44899089 | None:intergenic | 40.0% |
| !!! | GCATTTTCTGCTGCTGTTTT+GGG | + | chr5.4:44899338-44899357 | MS.gene63032:CDS | 40.0% |
| !!! | GGTTTTTTACCAGTGTGAAC+AGG | + | chr5.4:44898713-44898732 | MS.gene63032:intron | 40.0% |
| AAAGCCCAATCCCAAGAACT+GGG | + | chr5.4:44898462-44898481 | MS.gene63032:intron | 45.0% | |
| AACCTAATCACGCTTGGCTT+GGG | + | chr5.4:44899305-44899324 | MS.gene63032:CDS | 45.0% | |
| AAGACTTCGACAGCGAATAC+CGG | - | chr5.4:44897590-44897609 | None:intergenic | 45.0% | |
| AAGCCAATAGGACTACACGT+AGG | - | chr5.4:44896750-44896769 | None:intergenic | 45.0% | |
| AAGGCAAGTGAAATAGCGGT+TGG | + | chr5.4:44896422-44896441 | MS.gene63032:CDS | 45.0% | |
| AAGTGCATCACACATCTGAG+GGG | - | chr5.4:44897387-44897406 | None:intergenic | 45.0% | |
| AATAGCCGGGATATTGGACA+CGG | + | chr5.4:44897996-44898015 | MS.gene63032:CDS | 45.0% | |
| ACACGCCTCTTTGATATTCC+AGG | - | chr5.4:44897818-44897837 | None:intergenic | 45.0% | |
| ACCGGGATGACTCAAAGATA+AGG | - | chr5.4:44897572-44897591 | None:intergenic | 45.0% | |
| AGAAATGAAGGGGGATTAGG+GGG | + | chr5.4:44898664-44898683 | MS.gene63032:intron | 45.0% | |
| ATATTGGACACGGTGGTACT+GGG | + | chr5.4:44898006-44898025 | MS.gene63032:intron | 45.0% | |
| ATGGCAGGATACTGGAATGA+TGG | + | chr5.4:44899385-44899404 | MS.gene63032:CDS | 45.0% | |
| CAGAAATGAAGGGGGATTAG+GGG | + | chr5.4:44898663-44898682 | MS.gene63032:intron | 45.0% | |
| CCTATTGAAATCCTACCTCC+GGG | + | chr5.4:44899667-44899686 | MS.gene63032:CDS | 45.0% | |
| CTAACCTCTTCAGAGCTTCA+CGG | - | chr5.4:44898190-44898209 | None:intergenic | 45.0% | |
| CTATTGAAATCCTACCTCCG+GGG | + | chr5.4:44899668-44899687 | MS.gene63032:CDS | 45.0% | |
| CTCTTGGACAAAAGAAGCAG+AGG | + | chr5.4:44896394-44896413 | MS.gene63032:CDS | 45.0% | |
| GAACGTAAACAGCCAACGTA+AGG | - | chr5.4:44897901-44897920 | None:intergenic | 45.0% | |
| GCATTAAGTGACATCATCCC+CGG | - | chr5.4:44899688-44899707 | None:intergenic | 45.0% | |
| GCCTTATCTTTGAGTCATCC+CGG | + | chr5.4:44897568-44897587 | MS.gene63032:CDS | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr5.4:44897267-44897286 | None:intergenic | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | - | chr5.4:44897270-44897289 | None:intergenic | 45.0% | |
| GGAGGTAGGATTTCAATAGG+TGG | - | chr5.4:44899667-44899686 | None:intergenic | 45.0% | |
| GGCCATTAAATAGTCACTGC+TGG | - | chr5.4:44896780-44896799 | None:intergenic | 45.0% | |
| GGGATCGAGATGGTAAATAC+AGG | + | chr5.4:44898482-44898501 | MS.gene63032:intron | 45.0% | |
| TAAAGCCCAATCCCAAGAAC+TGG | + | chr5.4:44898461-44898480 | MS.gene63032:intron | 45.0% | |
| TAACCTCTTCAGAGCTTCAC+GGG | - | chr5.4:44898189-44898208 | None:intergenic | 45.0% | |
| TAATGGCTTTCACATTGGGG+GGG | + | chr5.4:44896933-44896952 | MS.gene63032:intron | 45.0% | |
| TCTGCCAAACTCGTAAGCTT+AGG | - | chr5.4:44899631-44899650 | None:intergenic | 45.0% | |
| TGTTGTCATGGATGAGCAGT+CGG | + | chr5.4:44897099-44897118 | MS.gene63032:intron | 45.0% | |
| TTAACACCGACCACAACAAG+AGG | - | chr5.4:44896509-44896528 | None:intergenic | 45.0% | |
| TTCTTGGGATTGGGCTTTAC+TGG | - | chr5.4:44898460-44898479 | None:intergenic | 45.0% | |
| TTTGGGGGACAATGCTCTAA+TGG | + | chr5.4:44899355-44899374 | MS.gene63032:CDS | 45.0% | |
| ! | AGAGGCGTGTTGTATGCTTA+TGG | + | chr5.4:44897828-44897847 | MS.gene63032:intron | 45.0% |
| ! | TCTAATGGAGAAAGCATGGC+AGG | + | chr5.4:44899370-44899389 | MS.gene63032:CDS | 45.0% |
| ! | TGAAGAATTTGGTTCAGGCC+TGG | + | chr5.4:44899521-44899540 | MS.gene63032:CDS | 45.0% |
| ! | TGTCGAAGTCTTGCTGCTTA+TGG | + | chr5.4:44897598-44897617 | MS.gene63032:CDS | 45.0% |
| ! | TTACACAAGAGGCTGTTTCC+AGG | + | chr5.4:44897302-44897321 | MS.gene63032:intron | 45.0% |
| !! | ACAGAAGCACTTCATTTGCC+TGG | + | chr5.4:44897797-44897816 | MS.gene63032:CDS | 45.0% |
| !! | TCTTGTTGTGGTCGGTGTTA+AGG | + | chr5.4:44896508-44896527 | MS.gene63032:CDS | 45.0% |
| !! | TGCATTTCTGGCTTCTCTTG+AGG | + | chr5.4:44899603-44899622 | MS.gene63032:CDS | 45.0% |
| !!! | TTTATTTATTTTTTTTGAAT+CGG | - | chr5.4:44899228-44899247 | None:intergenic | 5.0% |
| AAAGTCACGGGTTCAAGTCC+TGG | - | chr5.4:44897323-44897342 | None:intergenic | 50.0% | |
| AATGCGACCCGTGTGCAAAA+TGG | + | chr5.4:44899059-44899078 | MS.gene63032:intron | 50.0% | |
| ACACATCTGAGGGGTAACCT+TGG | - | chr5.4:44897378-44897397 | None:intergenic | 50.0% | |
| ACCATCTCGATCCCAGTTCT+TGG | - | chr5.4:44898476-44898495 | None:intergenic | 50.0% | |
| AGACTTCGACAGCGAATACC+GGG | - | chr5.4:44897589-44897608 | None:intergenic | 50.0% | |
| ATTGACGCTGCAGATGCTAC+AGG | + | chr5.4:44898149-44898168 | MS.gene63032:CDS | 50.0% | |
| CAACCTAATCACGCTTGGCT+TGG | + | chr5.4:44899304-44899323 | MS.gene63032:CDS | 50.0% | |
| CAACCTCTCTCTGTAGCACT+TGG | - | chr5.4:44899549-44899568 | None:intergenic | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | + | chr5.4:44897358-44897377 | MS.gene63032:intron | 50.0% | |
| CCATCTCGATCCCAGTTCTT+GGG | - | chr5.4:44898475-44898494 | None:intergenic | 50.0% | |
| CCCGGAGGTAGGATTTCAAT+AGG | - | chr5.4:44899670-44899689 | None:intergenic | 50.0% | |
| CGATCCCAGTTCTTGGGATT+GGG | - | chr5.4:44898469-44898488 | None:intergenic | 50.0% | |
| CTTACGAGTTTGGCAGATGC+AGG | + | chr5.4:44899634-44899653 | MS.gene63032:CDS | 50.0% | |
| GAACCAAGTGCTACAGAGAG+AGG | + | chr5.4:44899543-44899562 | MS.gene63032:CDS | 50.0% | |
| GATATTGGACACGGTGGTAC+TGG | + | chr5.4:44898005-44898024 | MS.gene63032:intron | 50.0% | |
| GATGCACTTAAAGGGCAACC+CGG | + | chr5.4:44897200-44897219 | MS.gene63032:intron | 50.0% | |
| GCAAGTGAAATAGCGGTTGG+TGG | + | chr5.4:44896425-44896444 | MS.gene63032:CDS | 50.0% | |
| GCATGTACCTACCACAATCC+AGG | - | chr5.4:44897540-44897559 | None:intergenic | 50.0% | |
| GCATTGCGCCTTGCAAATCA+TGG | + | chr5.4:44898263-44898282 | MS.gene63032:CDS | 50.0% | |
| GCTGCAGCTGGATCAGTTAA+AGG | + | chr5.4:44898209-44898228 | MS.gene63032:CDS | 50.0% | |
| GGAGCCTAAGCTTACGAGTT+TGG | + | chr5.4:44899624-44899643 | MS.gene63032:CDS | 50.0% | |
| GGATACTGGAATGATGGCAG+AGG | + | chr5.4:44899391-44899410 | MS.gene63032:CDS | 50.0% | |
| GTTGGCTGTTTACGTTCTGC+AGG | + | chr5.4:44897904-44897923 | MS.gene63032:intron | 50.0% | |
| TACCACCGTGTCCAATATCC+CGG | - | chr5.4:44898004-44898023 | None:intergenic | 50.0% | |
| TCAAACAGGGCAAGTAGGCT+TGG | + | chr5.4:44897722-44897741 | MS.gene63032:intron | 50.0% | |
| TCGATCCCAGTTCTTGGGAT+TGG | - | chr5.4:44898470-44898489 | None:intergenic | 50.0% | |
| TCTCTGTAGCACTTGGTTCC+AGG | - | chr5.4:44899542-44899561 | None:intergenic | 50.0% | |
| TTAAGTGACATCATCCCCGG+AGG | - | chr5.4:44899685-44899704 | None:intergenic | 50.0% | |
| ! | GAGAAAGCATGGCAGGATAC+TGG | + | chr5.4:44899377-44899396 | MS.gene63032:CDS | 50.0% |
| ! | GGCAGTTACTCGTTTTCCGA+TGG | + | chr5.4:44896463-44896482 | MS.gene63032:CDS | 50.0% |
| !! | AGTGAAATAGCGGTTGGTGG+AGG | + | chr5.4:44896428-44896447 | MS.gene63032:CDS | 50.0% |
| !! | GTTGTGGTCGGTGTTAAGGA+TGG | + | chr5.4:44896512-44896531 | MS.gene63032:CDS | 50.0% |
| !! | TAATCACGCTTGGCTTGGGA+CGG | + | chr5.4:44899309-44899328 | MS.gene63032:CDS | 50.0% |
| ACCACAACAAGAGGCCCAAC+CGG | - | chr5.4:44896500-44896519 | None:intergenic | 55.0% | |
| ACCGGACGTTTCTGCTCCAT+CGG | - | chr5.4:44896482-44896501 | None:intergenic | 55.0% | |
| ATGAAGGGGGATTAGGGGGT+AGG | + | chr5.4:44898668-44898687 | MS.gene63032:intron | 55.0% | |
| ATGGAGCAGAAACGTCCGGT+TGG | + | chr5.4:44896482-44896501 | MS.gene63032:CDS | 55.0% | |
| CCCAAGAACTGGGATCGAGA+TGG | + | chr5.4:44898472-44898491 | MS.gene63032:intron | 55.0% | |
| GCTGCAGATGCTACAGGACA+GGG | + | chr5.4:44898155-44898174 | MS.gene63032:CDS | 55.0% | |
| GCTGTTTACGTTCTGCAGGC+TGG | + | chr5.4:44897908-44897927 | MS.gene63032:intron | 55.0% | |
| GTCCCAAGCCAAGCGTGATT+AGG | - | chr5.4:44899310-44899329 | None:intergenic | 55.0% | |
| TCCGATGGAGCAGAAACGTC+CGG | + | chr5.4:44896478-44896497 | MS.gene63032:CDS | 55.0% | |
| TGGAGCAGAAACGTCCGGTT+GGG | + | chr5.4:44896483-44896502 | MS.gene63032:CDS | 55.0% | |
| ! | CTGAAGAGGTTAGCTGCAGC+TGG | + | chr5.4:44898197-44898216 | MS.gene63032:CDS | 55.0% |
| ! | GAGCTGATGGTGACGACTCT+TGG | + | chr5.4:44896378-44896397 | MS.gene63032:CDS | 55.0% |
| ! | GATAGGAAAGGTGGCACCGA+AGG | - | chr5.4:44896341-44896360 | None:intergenic | 55.0% |
| ! | GTTGGGCCTCTTGTTGTGGT+CGG | + | chr5.4:44896500-44896519 | MS.gene63032:CDS | 55.0% |
| !! | AATCACGCTTGGCTTGGGAC+GGG | + | chr5.4:44899310-44899329 | MS.gene63032:CDS | 55.0% |
| !! | GAAATAGCGGTTGGTGGAGG+AGG | + | chr5.4:44896431-44896450 | MS.gene63032:CDS | 55.0% |
| !! | TTGCCCGTGAAGCTCTGAAG+AGG | + | chr5.4:44898183-44898202 | MS.gene63032:CDS | 55.0% |
| AGCCGGGATATTGGACACGG+TGG | + | chr5.4:44897999-44898018 | MS.gene63032:CDS | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | - | chr5.4:44897369-44897388 | None:intergenic | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | - | chr5.4:44897222-44897241 | None:intergenic | 60.0% | |
| CATACGCAAGGTCCGGGAAG+GGG | + | chr5.4:44897239-44897258 | MS.gene63032:intron | 60.0% | |
| CGCTGCAGATGCTACAGGAC+AGG | + | chr5.4:44898154-44898173 | MS.gene63032:CDS | 60.0% | |
| CTGAAGCTCCCGCATACGCA+AGG | + | chr5.4:44897227-44897246 | MS.gene63032:intron | 60.0% | |
| CTTCCCGGACCTTGCGTATG+CGG | - | chr5.4:44897239-44897258 | None:intergenic | 60.0% | |
| GCATACGCAAGGTCCGGGAA+GGG | + | chr5.4:44897238-44897257 | MS.gene63032:intron | 60.0% | |
| GTGACATCATCCCCGGAGGT+AGG | - | chr5.4:44899681-44899700 | None:intergenic | 60.0% | |
| TCCGGTTGGGCCTCTTGTTG+TGG | + | chr5.4:44896496-44896515 | MS.gene63032:CDS | 60.0% | |
| TTCCCGGACCTTGCGTATGC+GGG | - | chr5.4:44897238-44897257 | None:intergenic | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | chr5.4:44897254-44897273 | None:intergenic | 60.0% |
| CGCATACGCAAGGTCCGGGA+AGG | + | chr5.4:44897237-44897256 | MS.gene63032:intron | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | + | chr5.4:44897252-44897271 | MS.gene63032:intron | 65.0% | |
| CTCCCGCATACGCAAGGTCC+GGG | + | chr5.4:44897233-44897252 | MS.gene63032:intron | 65.0% | |
| GCTCCCGCATACGCAAGGTC+CGG | + | chr5.4:44897232-44897251 | MS.gene63032:intron | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | - | chr5.4:44897221-44897240 | None:intergenic | 65.0% | |
| ! | GGACACGGTGGTACTGGGCT+GGG | + | chr5.4:44898011-44898030 | MS.gene63032:intron | 65.0% |
| ! | TGGACACGGTGGTACTGGGC+TGG | + | chr5.4:44898010-44898029 | MS.gene63032:intron | 65.0% |
| ! | TGGTGGAGGAGGCGTGTCTG+TGG | + | chr5.4:44896442-44896461 | MS.gene63032:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 44896308 | 44899741 | 44896308 | ID=MS.gene63032 |
| chr5.4 | mRNA | 44896308 | 44899741 | 44896308 | ID=MS.gene63032.t1;Parent=MS.gene63032 |
| chr5.4 | exon | 44896308 | 44896555 | 44896308 | ID=MS.gene63032.t1.exon1;Parent=MS.gene63032.t1 |
| chr5.4 | CDS | 44896308 | 44896555 | 44896308 | ID=cds.MS.gene63032.t1;Parent=MS.gene63032.t1 |
| chr5.4 | exon | 44897552 | 44897644 | 44897552 | ID=MS.gene63032.t1.exon2;Parent=MS.gene63032.t1 |
| chr5.4 | CDS | 44897552 | 44897644 | 44897552 | ID=cds.MS.gene63032.t1;Parent=MS.gene63032.t1 |
| chr5.4 | exon | 44897730 | 44897838 | 44897730 | ID=MS.gene63032.t1.exon3;Parent=MS.gene63032.t1 |
| chr5.4 | CDS | 44897730 | 44897838 | 44897730 | ID=cds.MS.gene63032.t1;Parent=MS.gene63032.t1 |
| chr5.4 | exon | 44897933 | 44898020 | 44897933 | ID=MS.gene63032.t1.exon4;Parent=MS.gene63032.t1 |
| chr5.4 | CDS | 44897933 | 44898020 | 44897933 | ID=cds.MS.gene63032.t1;Parent=MS.gene63032.t1 |
| chr5.4 | exon | 44898099 | 44898304 | 44898099 | ID=MS.gene63032.t1.exon5;Parent=MS.gene63032.t1 |
| chr5.4 | CDS | 44898099 | 44898304 | 44898099 | ID=cds.MS.gene63032.t1;Parent=MS.gene63032.t1 |
| chr5.4 | exon | 44899293 | 44899430 | 44899293 | ID=MS.gene63032.t1.exon6;Parent=MS.gene63032.t1 |
| chr5.4 | CDS | 44899293 | 44899430 | 44899293 | ID=cds.MS.gene63032.t1;Parent=MS.gene63032.t1 |
| chr5.4 | exon | 44899502 | 44899741 | 44899502 | ID=MS.gene63032.t1.exon7;Parent=MS.gene63032.t1 |
| chr5.4 | CDS | 44899502 | 44899741 | 44899502 | ID=cds.MS.gene63032.t1;Parent=MS.gene63032.t1 |
| Gene Sequence |
| Protein sequence |
