Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56067.t1 | XP_003607895.1 | 99.1 | 318 | 3 | 0 | 1 | 318 | 1 | 318 | 2.10E-173 | 618.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56067.t1 | Q39211 | 81.2 | 319 | 59 | 1 | 1 | 318 | 1 | 319 | 3.9e-144 | 512.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56067.t1 | Q2MGQ5 | 99.1 | 318 | 3 | 0 | 1 | 318 | 1 | 318 | 1.5e-173 | 618.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene56067 | 0.803963 | 2.71E-49 | -1.69E-46 |
| MS.gene049159 | MS.gene56067 | 0.807741 | 4.36E-50 | -1.69E-46 |
| MS.gene049190 | MS.gene56067 | 0.816241 | 6.12E-52 | -1.69E-46 |
| MS.gene049207 | MS.gene56067 | 0.821236 | 4.49E-53 | -1.69E-46 |
| MS.gene049255 | MS.gene56067 | 0.858385 | 8.54E-63 | -1.69E-46 |
| MS.gene049341 | MS.gene56067 | 0.826352 | 2.84E-54 | -1.69E-46 |
| MS.gene049350 | MS.gene56067 | 0.808308 | 3.30E-50 | -1.69E-46 |
| MS.gene049441 | MS.gene56067 | 0.801498 | 8.75E-49 | -1.69E-46 |
| MS.gene049666 | MS.gene56067 | 0.816971 | 4.20E-52 | -1.69E-46 |
| MS.gene049672 | MS.gene56067 | 0.811322 | 7.42E-51 | -1.69E-46 |
| MS.gene049821 | MS.gene56067 | 0.828705 | 7.75E-55 | -1.69E-46 |
| MS.gene049824 | MS.gene56067 | 0.870877 | 1.05E-66 | -1.69E-46 |
| MS.gene049825 | MS.gene56067 | 0.857258 | 1.84E-62 | -1.69E-46 |
| MS.gene049850 | MS.gene56067 | 0.813011 | 3.18E-51 | -1.69E-46 |
| MS.gene049873 | MS.gene56067 | 0.869603 | 2.74E-66 | -1.69E-46 |
| MS.gene050020 | MS.gene56067 | 0.801506 | 8.72E-49 | -1.69E-46 |
| MS.gene050277 | MS.gene56067 | 0.818401 | 2.00E-52 | -1.69E-46 |
| MS.gene050303 | MS.gene56067 | 0.811013 | 8.66E-51 | -1.69E-46 |
| MS.gene050427 | MS.gene56067 | 0.819531 | 1.11E-52 | -1.69E-46 |
| MS.gene05045 | MS.gene56067 | 0.810795 | 9.65E-51 | -1.69E-46 |
| MS.gene050559 | MS.gene56067 | 0.829117 | 6.16E-55 | -1.69E-46 |
| MS.gene050561 | MS.gene56067 | 0.819286 | 1.26E-52 | -1.69E-46 |
| MS.gene050562 | MS.gene56067 | 0.803261 | 3.79E-49 | -1.69E-46 |
| MS.gene050689 | MS.gene56067 | 0.868251 | 7.50E-66 | -1.69E-46 |
| MS.gene050807 | MS.gene56067 | 0.800058 | 1.72E-48 | -1.69E-46 |
| MS.gene050877 | MS.gene56067 | 0.828861 | 7.10E-55 | -1.69E-46 |
| MS.gene050901 | MS.gene56067 | 0.81918 | 1.33E-52 | -1.69E-46 |
| MS.gene050945 | MS.gene56067 | 0.82108 | 4.88E-53 | -1.69E-46 |
| MS.gene051234 | MS.gene56067 | 0.816763 | 4.68E-52 | -1.69E-46 |
| MS.gene051247 | MS.gene56067 | 0.800939 | 1.14E-48 | -1.69E-46 |
| MS.gene051279 | MS.gene56067 | 0.80752 | 4.86E-50 | -1.69E-46 |
| MS.gene051328 | MS.gene56067 | 0.842291 | 2.83E-58 | -1.69E-46 |
| MS.gene051343 | MS.gene56067 | 0.802477 | 5.51E-49 | -1.69E-46 |
| MS.gene05134 | MS.gene56067 | 0.855042 | 8.23E-62 | -1.69E-46 |
| MS.gene051363 | MS.gene56067 | 0.832874 | 7.37E-56 | -1.69E-46 |
| MS.gene051365 | MS.gene56067 | 0.808624 | 2.83E-50 | -1.69E-46 |
| MS.gene05157 | MS.gene56067 | 0.821613 | 3.68E-53 | -1.69E-46 |
| MS.gene051700 | MS.gene56067 | 0.827466 | 1.54E-54 | -1.69E-46 |
| MS.gene051701 | MS.gene56067 | 0.801667 | 8.08E-49 | -1.69E-46 |
| MS.gene051719 | MS.gene56067 | 0.838124 | 3.46E-57 | -1.69E-46 |
| MS.gene051720 | MS.gene56067 | 0.82646 | 2.68E-54 | -1.69E-46 |
| MS.gene051744 | MS.gene56067 | 0.848393 | 6.31E-60 | -1.69E-46 |
| MS.gene051791 | MS.gene56067 | 0.847807 | 9.15E-60 | -1.69E-46 |
| MS.gene05188 | MS.gene56067 | 0.818858 | 1.57E-52 | -1.69E-46 |
| MS.gene051975 | MS.gene56067 | 0.833046 | 6.68E-56 | -1.69E-46 |
| MS.gene052133 | MS.gene56067 | 0.813833 | 2.09E-51 | -1.69E-46 |
| MS.gene052516 | MS.gene56067 | 0.83083 | 2.35E-55 | -1.69E-46 |
| MS.gene052519 | MS.gene56067 | 0.82217 | 2.73E-53 | -1.69E-46 |
| MS.gene052582 | MS.gene56067 | 0.814789 | 1.29E-51 | -1.69E-46 |
| MS.gene052584 | MS.gene56067 | 0.831631 | 1.50E-55 | -1.69E-46 |
| MS.gene052611 | MS.gene56067 | 0.809207 | 2.12E-50 | -1.69E-46 |
| MS.gene052879 | MS.gene56067 | 0.815024 | 1.14E-51 | -1.69E-46 |
| MS.gene052947 | MS.gene56067 | 0.83938 | 1.64E-57 | -1.69E-46 |
| MS.gene053008 | MS.gene56067 | 0.800578 | 1.35E-48 | -1.69E-46 |
| MS.gene053080 | MS.gene56067 | 0.827627 | 1.41E-54 | -1.69E-46 |
| MS.gene053122 | MS.gene56067 | 0.889101 | 3.27E-73 | -1.69E-46 |
| MS.gene053195 | MS.gene56067 | 0.842844 | 2.02E-58 | -1.69E-46 |
| MS.gene053226 | MS.gene56067 | 0.904571 | 1.07E-79 | -1.69E-46 |
| MS.gene053230 | MS.gene56067 | 0.805574 | 1.25E-49 | -1.69E-46 |
| MS.gene053541 | MS.gene56067 | 0.8174 | 3.36E-52 | -1.69E-46 |
| MS.gene053542 | MS.gene56067 | 0.826634 | 2.44E-54 | -1.69E-46 |
| MS.gene053597 | MS.gene56067 | 0.803018 | 4.26E-49 | -1.69E-46 |
| MS.gene053599 | MS.gene56067 | 0.831681 | 1.45E-55 | -1.69E-46 |
| MS.gene05364 | MS.gene56067 | 0.883121 | 5.86E-71 | -1.69E-46 |
| MS.gene053931 | MS.gene56067 | 0.845914 | 3.02E-59 | -1.69E-46 |
| MS.gene053995 | MS.gene56067 | 0.835723 | 1.42E-56 | -1.69E-46 |
| MS.gene054142 | MS.gene56067 | 0.837203 | 5.97E-57 | -1.69E-46 |
| MS.gene054651 | MS.gene56067 | 0.845919 | 3.01E-59 | -1.69E-46 |
| MS.gene054657 | MS.gene56067 | 0.802093 | 6.61E-49 | -1.69E-46 |
| MS.gene055162 | MS.gene56067 | 0.803496 | 3.39E-49 | -1.69E-46 |
| MS.gene05517 | MS.gene56067 | 0.822216 | 2.67E-53 | -1.69E-46 |
| MS.gene055466 | MS.gene56067 | 0.812135 | 4.94E-51 | -1.69E-46 |
| MS.gene055512 | MS.gene56067 | 0.858821 | 6.33E-63 | -1.69E-46 |
| MS.gene055513 | MS.gene56067 | 0.805168 | 1.52E-49 | -1.69E-46 |
| MS.gene055555 | MS.gene56067 | 0.820589 | 6.33E-53 | -1.69E-46 |
| MS.gene055580 | MS.gene56067 | -0.820123 | 8.10E-53 | -1.69E-46 |
| MS.gene055694 | MS.gene56067 | 0.842423 | 2.61E-58 | -1.69E-46 |
| MS.gene055778 | MS.gene56067 | 0.826403 | 2.77E-54 | -1.69E-46 |
| MS.gene055808 | MS.gene56067 | 0.862682 | 4.26E-64 | -1.69E-46 |
| MS.gene055841 | MS.gene56067 | 0.829261 | 5.68E-55 | -1.69E-46 |
| MS.gene056005 | MS.gene56067 | 0.822086 | 2.86E-53 | -1.69E-46 |
| MS.gene056050 | MS.gene56067 | 0.801191 | 1.01E-48 | -1.69E-46 |
| MS.gene056091 | MS.gene56067 | 0.810263 | 1.26E-50 | -1.69E-46 |
| MS.gene056215 | MS.gene56067 | 0.86355 | 2.30E-64 | -1.69E-46 |
| MS.gene056308 | MS.gene56067 | 0.80918 | 2.15E-50 | -1.69E-46 |
| MS.gene056366 | MS.gene56067 | 0.838787 | 2.34E-57 | -1.69E-46 |
| MS.gene056595 | MS.gene56067 | 0.821525 | 3.86E-53 | -1.69E-46 |
| MS.gene056631 | MS.gene56067 | 0.813878 | 2.05E-51 | -1.69E-46 |
| MS.gene05686 | MS.gene56067 | 0.812487 | 4.14E-51 | -1.69E-46 |
| MS.gene05689 | MS.gene56067 | 0.829562 | 4.80E-55 | -1.69E-46 |
| MS.gene056986 | MS.gene56067 | 0.804926 | 1.71E-49 | -1.69E-46 |
| MS.gene057060 | MS.gene56067 | 0.833491 | 5.17E-56 | -1.69E-46 |
| MS.gene057102 | MS.gene56067 | 0.817152 | 3.82E-52 | -1.69E-46 |
| MS.gene057208 | MS.gene56067 | 0.83342 | 5.39E-56 | -1.69E-46 |
| MS.gene057444 | MS.gene56067 | 0.819853 | 9.34E-53 | -1.69E-46 |
| MS.gene057693 | MS.gene56067 | 0.852893 | 3.42E-61 | -1.69E-46 |
| MS.gene057694 | MS.gene56067 | 0.835117 | 2.02E-56 | -1.69E-46 |
| MS.gene057705 | MS.gene56067 | 0.884037 | 2.70E-71 | -1.69E-46 |
| MS.gene058008 | MS.gene56067 | 0.807455 | 5.01E-50 | -1.69E-46 |
| MS.gene058009 | MS.gene56067 | 0.821944 | 3.08E-53 | -1.69E-46 |
| MS.gene058216 | MS.gene56067 | 0.809313 | 2.01E-50 | -1.69E-46 |
| MS.gene058625 | MS.gene56067 | 0.832462 | 9.33E-56 | -1.69E-46 |
| MS.gene058781 | MS.gene56067 | 0.809381 | 1.95E-50 | -1.69E-46 |
| MS.gene058783 | MS.gene56067 | 0.84132 | 5.10E-58 | -1.69E-46 |
| MS.gene059146 | MS.gene56067 | 0.820418 | 6.93E-53 | -1.69E-46 |
| MS.gene059151 | MS.gene56067 | 0.816825 | 4.53E-52 | -1.69E-46 |
| MS.gene05953 | MS.gene56067 | 0.802672 | 5.02E-49 | -1.69E-46 |
| MS.gene05954 | MS.gene56067 | 0.835402 | 1.71E-56 | -1.69E-46 |
| MS.gene059625 | MS.gene56067 | 0.81509 | 1.10E-51 | -1.69E-46 |
| MS.gene05978 | MS.gene56067 | 0.884821 | 1.38E-71 | -1.69E-46 |
| MS.gene059842 | MS.gene56067 | 0.827348 | 1.64E-54 | -1.69E-46 |
| MS.gene05985 | MS.gene56067 | -0.810293 | 1.24E-50 | -1.69E-46 |
| MS.gene059935 | MS.gene56067 | 0.842949 | 1.89E-58 | -1.69E-46 |
| MS.gene06001 | MS.gene56067 | 0.806158 | 9.42E-50 | -1.69E-46 |
| MS.gene060194 | MS.gene56067 | 0.817229 | 3.67E-52 | -1.69E-46 |
| MS.gene060355 | MS.gene56067 | 0.804193 | 2.43E-49 | -1.69E-46 |
| MS.gene060365 | MS.gene56067 | 0.837079 | 6.42E-57 | -1.69E-46 |
| MS.gene060429 | MS.gene56067 | 0.877032 | 8.70E-69 | -1.69E-46 |
| MS.gene060587 | MS.gene56067 | 0.853488 | 2.31E-61 | -1.69E-46 |
| MS.gene060763 | MS.gene56067 | 0.810843 | 9.42E-51 | -1.69E-46 |
| MS.gene060830 | MS.gene56067 | 0.800818 | 1.21E-48 | -1.69E-46 |
| MS.gene060917 | MS.gene56067 | 0.820195 | 7.80E-53 | -1.69E-46 |
| MS.gene060935 | MS.gene56067 | 0.828985 | 6.63E-55 | -1.69E-46 |
| MS.gene060937 | MS.gene56067 | 0.80377 | 2.97E-49 | -1.69E-46 |
| MS.gene061176 | MS.gene56067 | 0.80811 | 3.64E-50 | -1.69E-46 |
| MS.gene061177 | MS.gene56067 | 0.807572 | 4.73E-50 | -1.69E-46 |
| MS.gene061178 | MS.gene56067 | 0.807986 | 3.87E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene022098 | MS.gene56067 | PPI |
| MS.gene24205 | MS.gene56067 | PPI |
| MS.gene27287 | MS.gene56067 | PPI |
| MS.gene27025 | MS.gene56067 | PPI |
| MS.gene94781 | MS.gene56067 | PPI |
| MS.gene055112 | MS.gene56067 | PPI |
| MS.gene84578 | MS.gene56067 | PPI |
| MS.gene64820 | MS.gene56067 | PPI |
| MS.gene46015 | MS.gene56067 | PPI |
| MS.gene67503 | MS.gene56067 | PPI |
| MS.gene67685 | MS.gene56067 | PPI |
| MS.gene97308 | MS.gene56067 | PPI |
| MS.gene43180 | MS.gene56067 | PPI |
| MS.gene56414 | MS.gene56067 | PPI |
| MS.gene90747 | MS.gene56067 | PPI |
| MS.gene95440 | MS.gene56067 | PPI |
| MS.gene006911 | MS.gene56067 | PPI |
| MS.gene063673 | MS.gene56067 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56067.t1 | MTR_4g084150 | 99.057 | 318 | 3 | 0 | 1 | 318 | 1 | 318 | 0.0 | 648 |
| MS.gene56067.t1 | MTR_3g060690 | 31.861 | 317 | 175 | 8 | 11 | 295 | 87 | 394 | 3.79e-37 | 137 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56067.t1 | AT2G15430 | 81.562 | 320 | 56 | 2 | 1 | 318 | 1 | 319 | 0.0 | 536 |
| MS.gene56067.t1 | AT2G15400 | 75.235 | 319 | 78 | 1 | 1 | 318 | 1 | 319 | 2.69e-177 | 493 |
| MS.gene56067.t1 | AT2G15430 | 77.350 | 234 | 50 | 2 | 1 | 232 | 1 | 233 | 2.54e-132 | 376 |
| MS.gene56067.t1 | AT2G15430 | 76.763 | 241 | 53 | 2 | 1 | 239 | 1 | 240 | 3.29e-132 | 376 |
| MS.gene56067.t1 | AT2G15400 | 72.174 | 230 | 63 | 1 | 1 | 229 | 1 | 230 | 1.01e-117 | 339 |
| MS.gene56067.t1 | AT1G60620 | 30.868 | 311 | 177 | 7 | 11 | 295 | 17 | 315 | 1.33e-33 | 126 |
| MS.gene56067.t1 | AT1G60620 | 30.868 | 311 | 177 | 7 | 11 | 295 | 82 | 380 | 4.89e-33 | 125 |
| MS.gene56067.t1 | AT1G60850 | 30.225 | 311 | 178 | 7 | 11 | 295 | 75 | 372 | 8.24e-33 | 125 |
| MS.gene56067.t1 | AT1G60850 | 30.225 | 311 | 178 | 7 | 11 | 295 | 75 | 372 | 8.24e-33 | 125 |
| MS.gene56067.t1 | AT1G60850 | 30.225 | 311 | 178 | 7 | 11 | 295 | 75 | 372 | 8.24e-33 | 125 |
| MS.gene56067.t1 | AT1G60850 | 34.906 | 212 | 106 | 5 | 11 | 196 | 75 | 280 | 8.55e-26 | 104 |
Find 74 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACATCAATGAAGATTTAA+TGG | 0.210874 | 4.3:+27757240 | MS.gene56067:CDS |
| GTTCAGTTGAGTTTCATCTT+AGG | 0.271624 | 4.3:+27755990 | MS.gene56067:CDS |
| TTTGACACTTGAGGAGAAAA+AGG | 0.302144 | 4.3:+27757267 | MS.gene56067:CDS |
| GTTACTCCGGTGGATGTTCC+TGG | 0.334842 | 4.3:+27756079 | MS.gene56067:CDS |
| CCGGAGCGCGTTGGCGACGC+TGG | 0.342082 | 4.3:-27755777 | None:intergenic |
| CTTCTGCTTGAGAATTTCAA+TGG | 0.357410 | 4.3:-27758826 | None:intergenic |
| CCAGCGTCGCCAACGCGCTC+CGG | 0.359601 | 4.3:+27755777 | MS.gene56067:CDS |
| GTTGAAGCTGATGATCAATT+TGG | 0.361165 | 4.3:+27758879 | MS.gene56067:CDS |
| TTCAGTTGAGTTTCATCTTA+GGG | 0.374933 | 4.3:+27755991 | MS.gene56067:CDS |
| TGTAGTCGTCTTTGAGTTCA+CGG | 0.407857 | 4.3:-27755727 | None:intergenic |
| CGCGTTGGCGACGCTGGCGT+CGG | 0.437447 | 4.3:-27755771 | None:intergenic |
| GCAGAAGCAATGGGAAAGCC+TGG | 0.442666 | 4.3:+27758714 | MS.gene56067:CDS |
| TCATCATAACTATATGCCTC+AGG | 0.443043 | 4.3:-27758675 | None:intergenic |
| AGTTGCTGCTGGTGACCATT+TGG | 0.448661 | 4.3:-27757191 | None:intergenic |
| CAAGGTCGATGGCGATGGTT+GGG | 0.459459 | 4.3:-27755820 | None:intergenic |
| AGGCAAACCTGCTGTGTGAC+AGG | 0.471461 | 4.3:-27757331 | None:intergenic |
| GACGTTGGATGTTAGTAGTA+AGG | 0.475900 | 4.3:+27756033 | MS.gene56067:CDS |
| TGAAATTCTCAAGCAGAAGC+TGG | 0.482693 | 4.3:+27758830 | MS.gene56067:CDS |
| ACTGAGAGCGATTGCTAGGA+AGG | 0.484416 | 4.3:+27757150 | MS.gene56067:CDS |
| TGATGATCAATTTGGTGAGC+TGG | 0.488837 | 4.3:+27758887 | MS.gene56067:CDS |
| TTGAGATGCTTTGACTGCTC+CGG | 0.496041 | 4.3:-27758790 | None:intergenic |
| TTCAACAAGGTCGATGGCGA+TGG | 0.497244 | 4.3:-27755825 | None:intergenic |
| TCTTTCTCCTTAACAATGGA+AGG | 0.498182 | 4.3:+27755671 | None:intergenic |
| GATGGCGATGGTTGGGACTT+CGG | 0.498289 | 4.3:-27755813 | None:intergenic |
| ACAAGGTCGATGGCGATGGT+TGG | 0.501063 | 4.3:-27755821 | None:intergenic |
| TCTTCATTGATGTGAATGTC+TGG | 0.502428 | 4.3:-27757232 | None:intergenic |
| TCTTAGGGTTAAGTGTATAA+CGG | 0.507140 | 4.3:+27756006 | MS.gene56067:CDS |
| ACGTGAGAAGCGCATGGCCA+TGG | 0.507484 | 4.3:-27755927 | None:intergenic |
| TGAGACTGAGAGCGATTGCT+AGG | 0.516563 | 4.3:+27757146 | MS.gene56067:CDS |
| ATCAAGAAAGCAGAAGCAAT+GGG | 0.525337 | 4.3:+27758705 | MS.gene56067:CDS |
| TGTGAAGTTGAGGAGAGGTC+AGG | 0.526667 | 4.3:+27757120 | MS.gene56067:CDS |
| TATTGATCCTGTCACACAGC+AGG | 0.526854 | 4.3:+27757324 | MS.gene56067:CDS |
| AATGGAGTCTTTGACACTTG+AGG | 0.531173 | 4.3:+27757258 | MS.gene56067:CDS |
| GCAGTTATTTCTATAAGCCC+AGG | 0.541886 | 4.3:-27758732 | None:intergenic |
| TTCGATTTCAACAAGGTCGA+TGG | 0.544241 | 4.3:-27755831 | None:intergenic |
| GATGCTTCTGTTGAATCTGA+TGG | 0.545347 | 4.3:+27756106 | MS.gene56067:CDS |
| GGATTATCATTGTGAAGTTG+AGG | 0.552832 | 4.3:+27757110 | MS.gene56067:CDS |
| TCAATATCAAAGACACGAGT+AGG | 0.554647 | 4.3:-27757307 | None:intergenic |
| TCGGTAAGGATCATGCCAAA+TGG | 0.554925 | 4.3:+27757176 | MS.gene56067:CDS |
| TGAGAGCGATTGCTAGGAAG+GGG | 0.558513 | 4.3:+27757152 | MS.gene56067:CDS |
| CATCACGCGCCGGAGCGCGT+TGG | 0.561690 | 4.3:-27755786 | None:intergenic |
| ACTCACAAGCGAACGTGCCA+TGG | 0.569511 | 4.3:+27755910 | MS.gene56067:CDS |
| CACCGGAGTAACGGTATGAT+CGG | 0.570614 | 4.3:-27756068 | None:intergenic |
| CTGAGAGCGATTGCTAGGAA+GGG | 0.570973 | 4.3:+27757151 | MS.gene56067:CDS |
| CTTCTGTTGAATCTGATGGA+AGG | 0.575113 | 4.3:+27756110 | MS.gene56067:CDS |
| CGATCATACCGTTACTCCGG+TGG | 0.575290 | 4.3:+27756069 | MS.gene56067:CDS |
| GATCAAGAAAGCAGAAGCAA+TGG | 0.576120 | 4.3:+27758704 | MS.gene56067:CDS |
| TGCTAGGAAGGGGATCGGTA+AGG | 0.577965 | 4.3:+27757162 | MS.gene56067:CDS |
| CAGAAGCAATGGGAAAGCCT+GGG | 0.582279 | 4.3:+27758715 | MS.gene56067:CDS |
| ATGGCACGTTCGCTTGTGAG+TGG | 0.583334 | 4.3:-27755908 | None:intergenic |
| GAGTTCATCGCTCACAGACT+CGG | 0.584109 | 4.3:+27755878 | MS.gene56067:CDS |
| AGGAACATCCACCGGAGTAA+CGG | 0.584181 | 4.3:-27756077 | None:intergenic |
| GATGAACTCGTCGTTCAGAA+CGG | 0.596567 | 4.3:-27755864 | None:intergenic |
| CGTGACTGTGATGCTTGTGA+TGG | 0.599792 | 4.3:+27755947 | MS.gene56067:CDS |
| GATGATCAATTTGGTGAGCT+GGG | 0.599917 | 4.3:+27758888 | MS.gene56067:CDS |
| CATCATAACTATATGCCTCA+GGG | 0.615098 | 4.3:-27758674 | None:intergenic |
| TCAACAGAAGCATCACCACC+AGG | 0.615579 | 4.3:-27756097 | None:intergenic |
| TGTGATGCTTGTGATGGTGA+TGG | 0.622311 | 4.3:+27755953 | MS.gene56067:CDS |
| CTCCGATCATACCGTTACTC+CGG | 0.622448 | 4.3:+27756066 | MS.gene56067:CDS |
| TCACCACCAGGAACATCCAC+CGG | 0.625792 | 4.3:-27756085 | None:intergenic |
| GCGATTGCTAGGAAGGGGAT+CGG | 0.627906 | 4.3:+27757157 | MS.gene56067:CDS |
| ATCATTGTGAAGTTGAGGAG+AGG | 0.635073 | 4.3:+27757115 | MS.gene56067:CDS |
| CTTCGGAAATCATCACGCGC+CGG | 0.642651 | 4.3:-27755796 | None:intergenic |
| ATGAAAGTAACAGTTGCTGC+TGG | 0.644886 | 4.3:-27757202 | None:intergenic |
| GGCATATAGTTATGATGATG+AGG | 0.651134 | 4.3:+27758680 | MS.gene56067:CDS |
| ACAGTCACGTGAGAAGCGCA+TGG | 0.655640 | 4.3:-27755933 | None:intergenic |
| AGTTCACTTCGATTTCAACA+AGG | 0.663781 | 4.3:-27755838 | None:intergenic |
| AGCAGAAGCTGGATGCTGTG+AGG | 0.686847 | 4.3:+27758841 | MS.gene56067:CDS |
| GGTGGTGGTAGTTGACCCTG+AGG | 0.702152 | 4.3:+27758659 | MS.gene56067:intron |
| GTGTATAACGGATCAGACGT+TGG | 0.703684 | 4.3:+27756018 | MS.gene56067:CDS |
| GAGCTGGGTGCACATATGCG+AGG | 0.705973 | 4.3:+27758903 | MS.gene56067:CDS |
| CTGGGTGCACATATGCGAGG+AGG | 0.741311 | 4.3:+27758906 | MS.gene56067:CDS |
| TGTGAGGCTATCTGAAGACA+CGG | 0.745035 | 4.3:+27758857 | MS.gene56067:CDS |
| ACTCCGGTGGATGTTCCTGG+TGG | 0.749174 | 4.3:+27756082 | MS.gene56067:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAAATATGATATTAATATC+TGG | + | chr4.3:27758224-27758243 | MS.gene56067:intron | 15.0% |
| !!! | AAGTAACAATGAATTTTTTA+AGG | - | chr4.3:27758589-27758608 | None:intergenic | 15.0% |
| !!! | ATTTTTTTTTAGATTTCAAC+TGG | + | chr4.3:27756143-27756162 | MS.gene56067:intron | 15.0% |
| !!! | TTTTTTTTTAGATTTCAACT+GGG | + | chr4.3:27756144-27756163 | MS.gene56067:intron | 15.0% |
| !! | AAATACCAAAAAATTAAGGT+TGG | + | chr4.3:27757926-27757945 | MS.gene56067:intron | 20.0% |
| !! | AGGAAAATACCAAAAAATTA+AGG | + | chr4.3:27757922-27757941 | MS.gene56067:intron | 20.0% |
| !! | GAATCTATAATTAGACATAA+TGG | - | chr4.3:27757865-27757884 | None:intergenic | 20.0% |
| !!! | ATTTTTTTGTATTGATTAGG+TGG | + | chr4.3:27758641-27758660 | MS.gene56067:intron | 20.0% |
| !!! | CTTTTGATTTTGTGTTTAAA+TGG | + | chr4.3:27757486-27757505 | MS.gene56067:intron | 20.0% |
| !!! | GTGATTTTTTTGTATTGATT+AGG | + | chr4.3:27758638-27758657 | MS.gene56067:intron | 20.0% |
| !!! | TATAAGCTATTTCTATAACA+AGG | + | chr4.3:27756302-27756321 | MS.gene56067:intron | 20.0% |
| !!! | TTTTTCCAACCTTAATTTTT+TGG | - | chr4.3:27757934-27757953 | None:intergenic | 20.0% |
| ! | AAATTAAGCTGTTTACCTAT+AGG | - | chr4.3:27756679-27756698 | None:intergenic | 25.0% |
| ! | AACCATCTAAATGAGATTAA+AGG | - | chr4.3:27756992-27757011 | None:intergenic | 25.0% |
| ! | AAGATCATATCAGAAAGTAA+AGG | - | chr4.3:27757744-27757763 | None:intergenic | 25.0% |
| ! | AATTAAGCTGTTTACCTATA+GGG | - | chr4.3:27756678-27756697 | None:intergenic | 25.0% |
| ! | CCTAAGAATCATTATCAAAT+TGG | - | chr4.3:27758187-27758206 | None:intergenic | 25.0% |
| ! | GTACAATAAATTACCTTAAG+TGG | - | chr4.3:27758614-27758633 | None:intergenic | 25.0% |
| ! | TAAGCTATGTCTATAACAAA+AGG | + | chr4.3:27756798-27756817 | MS.gene56067:intron | 25.0% |
| ! | TACCTTTAATCTCATTTAGA+TGG | + | chr4.3:27756987-27757006 | MS.gene56067:intron | 25.0% |
| ! | TCAAATAAACCAATACAAAC+AGG | + | chr4.3:27756461-27756480 | MS.gene56067:intron | 25.0% |
| ! | TCACATCAATGAAGATTTAA+TGG | + | chr4.3:27757240-27757259 | MS.gene56067:CDS | 25.0% |
| ! | TTGATCTTAGAACAAATGTT+GGG | + | chr4.3:27758131-27758150 | MS.gene56067:intron | 25.0% |
| ! | TTTATTACTATGAATCCACT+AGG | + | chr4.3:27758466-27758485 | MS.gene56067:intron | 25.0% |
| !! | AATGAGATTAAAGGTATGTT+TGG | - | chr4.3:27756983-27757002 | None:intergenic | 25.0% |
| !! | ATAAGAGTATGTAAAACACT+TGG | - | chr4.3:27758392-27758411 | None:intergenic | 25.0% |
| !! | ATTTAAAATCCTGCTTATGA+TGG | + | chr4.3:27758247-27758266 | MS.gene56067:intron | 25.0% |
| !! | TAATGATTCTTAGGCTTTAA+AGG | + | chr4.3:27758193-27758212 | MS.gene56067:intron | 25.0% |
| !! | TCGTACTTCAAATTCATTTT+AGG | + | chr4.3:27758433-27758452 | MS.gene56067:intron | 25.0% |
| !!! | ATGTTTTGAATAGTTCTTGT+GGG | + | chr4.3:27757711-27757730 | MS.gene56067:intron | 25.0% |
| !!! | CCAATTTGATAATGATTCTT+AGG | + | chr4.3:27758184-27758203 | MS.gene56067:intron | 25.0% |
| !!! | GTTTTAATGTTGGGTTTATT+CGG | + | chr4.3:27757044-27757063 | MS.gene56067:intron | 25.0% |
| !!! | TTGGTTTGATGTTTTCAAAT+GGG | + | chr4.3:27756498-27756517 | MS.gene56067:intron | 25.0% |
| !!! | TTTGGTTTGATGTTTTCAAA+TGG | + | chr4.3:27756497-27756516 | MS.gene56067:intron | 25.0% |
| !!! | TTTTAAGGAACAATACATCA+AGG | - | chr4.3:27758574-27758593 | None:intergenic | 25.0% |
| !!! | TTTTGTTTATGCTGAATGTA+GGG | + | chr4.3:27757087-27757106 | MS.gene56067:intron | 25.0% |
| !!! | TTTTTGTTTATGCTGAATGT+AGG | + | chr4.3:27757086-27757105 | MS.gene56067:intron | 25.0% |
| AAGGTTGGAAAAATAGAAAG+TGG | + | chr4.3:27757941-27757960 | MS.gene56067:intron | 30.0% | |
| AATAAGCTATGCGTATAACA+AGG | + | chr4.3:27756723-27756742 | MS.gene56067:intron | 30.0% | |
| AGAACAAACAGTTATGTTGT+AGG | + | chr4.3:27756579-27756598 | MS.gene56067:intron | 30.0% | |
| AGGTTGGAAAAATAGAAAGT+GGG | + | chr4.3:27757942-27757961 | MS.gene56067:intron | 30.0% | |
| AGTTATGTTGTAGGATCTTT+GGG | + | chr4.3:27756588-27756607 | MS.gene56067:intron | 30.0% | |
| ATCAAACCAAAATGAGAACA+AGG | - | chr4.3:27756488-27756507 | None:intergenic | 30.0% | |
| ATTCTTGATCAATGCTAAGT+CGG | + | chr4.3:27758507-27758526 | MS.gene56067:intron | 30.0% | |
| CACAAAATCAAAAGACAGTA+AGG | - | chr4.3:27757480-27757499 | None:intergenic | 30.0% | |
| CTTGATCTTAGAACAAATGT+TGG | + | chr4.3:27758130-27758149 | MS.gene56067:intron | 30.0% | |
| TATACGCATAGCTTATTCAT+AGG | - | chr4.3:27756720-27756739 | None:intergenic | 30.0% | |
| TCAAACCAAAATGAGAACAA+GGG | - | chr4.3:27756487-27756506 | None:intergenic | 30.0% | |
| TCTTAGGGTTAAGTGTATAA+CGG | + | chr4.3:27756006-27756025 | MS.gene56067:CDS | 30.0% | |
| TGATCTTAGAACAAATGTTG+GGG | + | chr4.3:27758132-27758151 | MS.gene56067:intron | 30.0% | |
| TTACAAGCAATCACAAATAG+AGG | + | chr4.3:27757792-27757811 | MS.gene56067:intron | 30.0% | |
| TTACATACTCTTATCTTGTG+TGG | + | chr4.3:27758398-27758417 | MS.gene56067:intron | 30.0% | |
| TTCAGTTGAGTTTCATCTTA+GGG | + | chr4.3:27755991-27756010 | MS.gene56067:CDS | 30.0% | |
| TTGAATGTGATTGTGTGTAT+GGG | + | chr4.3:27756196-27756215 | MS.gene56067:intron | 30.0% | |
| TTTGAATGTGATTGTGTGTA+TGG | + | chr4.3:27756195-27756214 | MS.gene56067:intron | 30.0% | |
| TTTGTTTATGCTGAATGTAG+GGG | + | chr4.3:27757088-27757107 | MS.gene56067:intron | 30.0% | |
| ! | ATCCTGATGTAGTGTTTTAT+GGG | - | chr4.3:27757832-27757851 | None:intergenic | 30.0% |
| ! | ATTTTCACAGTTGAATCTAC+CGG | + | chr4.3:27758771-27758790 | MS.gene56067:CDS | 30.0% |
| ! | CATTATCAAATTGGTAGCTT+GGG | - | chr4.3:27758178-27758197 | None:intergenic | 30.0% |
| ! | GATTAAAGGTATGTTTGGAT+TGG | - | chr4.3:27756978-27756997 | None:intergenic | 30.0% |
| ! | TATCCTGATGTAGTGTTTTA+TGG | - | chr4.3:27757833-27757852 | None:intergenic | 30.0% |
| ! | TCATTATCAAATTGGTAGCT+TGG | - | chr4.3:27758179-27758198 | None:intergenic | 30.0% |
| ! | TTTTCAAATGTGACATGCAT+GGG | + | chr4.3:27756530-27756549 | MS.gene56067:intron | 30.0% |
| !! | GATGTTTTGAATAGTTCTTG+TGG | + | chr4.3:27757710-27757729 | MS.gene56067:intron | 30.0% |
| !!! | AGAACGAACAGTTTTGTTTT+AGG | + | chr4.3:27756245-27756264 | MS.gene56067:intron | 30.0% |
| !!! | TTTTTGTATTGATTAGGTGG+TGG | + | chr4.3:27758644-27758663 | MS.gene56067:intron | 30.0% |
| AAAACACTACATCAGGATAG+TGG | + | chr4.3:27757834-27757853 | MS.gene56067:intron | 35.0% | |
| AAACACTACATCAGGATAGT+GGG | + | chr4.3:27757835-27757854 | MS.gene56067:intron | 35.0% | |
| AACTAGGATGTTTACCCAAA+GGG | - | chr4.3:27756749-27756768 | None:intergenic | 35.0% | |
| AAGACAGTAAGGCAAGTATT+TGG | - | chr4.3:27757469-27757488 | None:intergenic | 35.0% | |
| AAGGAACAATACATCAAGGA+AGG | - | chr4.3:27758570-27758589 | None:intergenic | 35.0% | |
| AGAGTGGAAAATGCAATTAG+AGG | + | chr4.3:27757644-27757663 | MS.gene56067:intron | 35.0% | |
| AGATCAAGCAATTACTAACC+AGG | - | chr4.3:27758118-27758137 | None:intergenic | 35.0% | |
| AGTTCACTTCGATTTCAACA+AGG | - | chr4.3:27755841-27755860 | None:intergenic | 35.0% | |
| ATATGTGTGTGTACGAACTA+AGG | + | chr4.3:27757902-27757921 | MS.gene56067:intron | 35.0% | |
| ATCAAGAAAGCAGAAGCAAT+GGG | + | chr4.3:27758705-27758724 | MS.gene56067:CDS | 35.0% | |
| CAGTTATGTTGTAGGATCTT+TGG | + | chr4.3:27756587-27756606 | MS.gene56067:intron | 35.0% | |
| CATCATAACTATATGCCTCA+GGG | - | chr4.3:27758677-27758696 | None:intergenic | 35.0% | |
| CTATTCTTATTCGCTTCCTA+AGG | + | chr4.3:27757352-27757371 | MS.gene56067:intron | 35.0% | |
| CTGATACTTAGTTATGCACT+TGG | + | chr4.3:27757430-27757449 | MS.gene56067:intron | 35.0% | |
| CTTAGGAAGCGAATAAGAAT+AGG | - | chr4.3:27757354-27757373 | None:intergenic | 35.0% | |
| CTTCACACTTTCATTCTAGA+AGG | + | chr4.3:27757766-27757785 | MS.gene56067:intron | 35.0% | |
| CTTCTGCTTGAGAATTTCAA+TGG | - | chr4.3:27758829-27758848 | None:intergenic | 35.0% | |
| GAAAACAGCTTACAGCTTAA+TGG | - | chr4.3:27756845-27756864 | None:intergenic | 35.0% | |
| GGATTATCATTGTGAAGTTG+AGG | + | chr4.3:27757110-27757129 | MS.gene56067:CDS | 35.0% | |
| GGTTGGAAAAATAGAAAGTG+GGG | + | chr4.3:27757943-27757962 | MS.gene56067:intron | 35.0% | |
| GTCTGTAAAAAAGACCCTAT+AGG | + | chr4.3:27756661-27756680 | MS.gene56067:intron | 35.0% | |
| GTTCAGTTGAGTTTCATCTT+AGG | + | chr4.3:27755990-27756009 | MS.gene56067:CDS | 35.0% | |
| GTTGAAGCTGATGATCAATT+TGG | + | chr4.3:27758879-27758898 | MS.gene56067:CDS | 35.0% | |
| GTTGGAAAAATAGAAAGTGG+GGG | + | chr4.3:27757944-27757963 | MS.gene56067:intron | 35.0% | |
| TAACTAGGATGTTTACCCAA+AGG | - | chr4.3:27756750-27756769 | None:intergenic | 35.0% | |
| TCAATATCAAAGACACGAGT+AGG | - | chr4.3:27757310-27757329 | None:intergenic | 35.0% | |
| TCATCATAACTATATGCCTC+AGG | - | chr4.3:27758678-27758697 | None:intergenic | 35.0% | |
| TCTTCATTGATGTGAATGTC+TGG | - | chr4.3:27757235-27757254 | None:intergenic | 35.0% | |
| TTAATGTTGGGTTTATTCGG+AGG | + | chr4.3:27757047-27757066 | MS.gene56067:intron | 35.0% | |
| TTGACTGCAAACTGTAGTAT+GGG | + | chr4.3:27758028-27758047 | MS.gene56067:intron | 35.0% | |
| TTGCTATAAAGCTCGTAACT+AGG | - | chr4.3:27756765-27756784 | None:intergenic | 35.0% | |
| TTGGAAAAATAGAAAGTGGG+GGG | + | chr4.3:27757945-27757964 | MS.gene56067:intron | 35.0% | |
| TTGTTTATGCTGAATGTAGG+GGG | + | chr4.3:27757089-27757108 | MS.gene56067:intron | 35.0% | |
| TTTGACACTTGAGGAGAAAA+AGG | + | chr4.3:27757267-27757286 | MS.gene56067:CDS | 35.0% | |
| TTTGACTGCAAACTGTAGTA+TGG | + | chr4.3:27758027-27758046 | MS.gene56067:intron | 35.0% | |
| ! | ACTGATTTCACATGTAATGC+TGG | + | chr4.3:27757395-27757414 | MS.gene56067:intron | 35.0% |
| ! | CATTGTTACTTGACCACTTA+AGG | + | chr4.3:27758598-27758617 | MS.gene56067:intron | 35.0% |
| ! | GGCATATAGTTATGATGATG+AGG | + | chr4.3:27758680-27758699 | MS.gene56067:CDS | 35.0% |
| ! | GTTTTCAAATGTGACATGCA+TGG | + | chr4.3:27756529-27756548 | MS.gene56067:intron | 35.0% |
| ! | TATTCGCTTCCTAAGGATTT+TGG | + | chr4.3:27757359-27757378 | MS.gene56067:intron | 35.0% |
| ! | TCCATTTTCATTGATGCTGA+GGG | + | chr4.3:27757020-27757039 | MS.gene56067:intron | 35.0% |
| ! | TTCCATTTTCATTGATGCTG+AGG | + | chr4.3:27757019-27757038 | MS.gene56067:intron | 35.0% |
| !! | CACAAGATAAAAGTACCTAG+TGG | - | chr4.3:27758484-27758503 | None:intergenic | 35.0% |
| !!! | AGAGAGTTTTGGAAATAAGC+TGG | + | chr4.3:27756370-27756389 | MS.gene56067:intron | 35.0% |
| AACATTCCATGGCCAAAGTT+TGG | + | chr4.3:27758060-27758079 | MS.gene56067:intron | 40.0% | |
| AATAAGCTGGAAACAGCTTG+TGG | + | chr4.3:27756383-27756402 | MS.gene56067:intron | 40.0% | |
| AATGGAGTCTTTGACACTTG+AGG | + | chr4.3:27757258-27757277 | MS.gene56067:CDS | 40.0% | |
| ACAAGTCAAACAGAACCTAG+TGG | - | chr4.3:27758537-27758556 | None:intergenic | 40.0% | |
| ACTTGAGGAGAAAAAGGAGT+GGG | + | chr4.3:27757273-27757292 | MS.gene56067:CDS | 40.0% | |
| AGCAATCACAAATAGAGGCA+TGG | + | chr4.3:27757797-27757816 | MS.gene56067:intron | 40.0% | |
| ATCATTGTGAAGTTGAGGAG+AGG | + | chr4.3:27757115-27757134 | MS.gene56067:CDS | 40.0% | |
| ATGAAAGTAACAGTTGCTGC+TGG | - | chr4.3:27757205-27757224 | None:intergenic | 40.0% | |
| ATGCTACAAGCACTTCCAAA+GGG | - | chr4.3:27756271-27756290 | None:intergenic | 40.0% | |
| CCACTCTACTTCAACTCAAA+AGG | - | chr4.3:27757631-27757650 | None:intergenic | 40.0% | |
| CTACCATGAAAAGATACGCT+GGG | + | chr4.3:27756870-27756889 | MS.gene56067:intron | 40.0% | |
| CTGCTGAAGCAATGCTTATA+AGG | + | chr4.3:27758322-27758341 | MS.gene56067:intron | 40.0% | |
| CTTCTGTTGAATCTGATGGA+AGG | + | chr4.3:27756110-27756129 | MS.gene56067:CDS | 40.0% | |
| GACGTTGGATGTTAGTAGTA+AGG | + | chr4.3:27756033-27756052 | MS.gene56067:CDS | 40.0% | |
| GATCAAGAAAGCAGAAGCAA+TGG | + | chr4.3:27758704-27758723 | MS.gene56067:CDS | 40.0% | |
| GATGCTTCTGTTGAATCTGA+TGG | + | chr4.3:27756106-27756125 | MS.gene56067:CDS | 40.0% | |
| GGTAAACAACCATCATAAGC+AGG | - | chr4.3:27758259-27758278 | None:intergenic | 40.0% | |
| GTGATTGTGTGTATGGGTTT+AGG | + | chr4.3:27756202-27756221 | MS.gene56067:intron | 40.0% | |
| GTTGAATCTGATGGAAGGTT+CGG | + | chr4.3:27756115-27756134 | MS.gene56067:intron | 40.0% | |
| TACCAAGCTAAGCATTTCTG+AGG | - | chr4.3:27756434-27756453 | None:intergenic | 40.0% | |
| TATGCTACAAGCACTTCCAA+AGG | - | chr4.3:27756272-27756291 | None:intergenic | 40.0% | |
| TCCCTCAGCATCAATGAAAA+TGG | - | chr4.3:27757024-27757043 | None:intergenic | 40.0% | |
| TGAAATTCTCAAGCAGAAGC+TGG | + | chr4.3:27758830-27758849 | MS.gene56067:CDS | 40.0% | |
| TGTGCCTAACCAAAATCCTT+AGG | - | chr4.3:27757371-27757390 | None:intergenic | 40.0% | |
| TTACTAACCAGGCACTACAA+CGG | - | chr4.3:27758107-27758126 | None:intergenic | 40.0% | |
| TTCGATTTCAACAAGGTCGA+TGG | - | chr4.3:27755834-27755853 | None:intergenic | 40.0% | |
| TTGTAGGATCTTTGGGTGAA+CGG | + | chr4.3:27756595-27756614 | MS.gene56067:intron | 40.0% | |
| ! | GAAGCTATCGTAGAGAGTTT+TGG | + | chr4.3:27756359-27756378 | MS.gene56067:intron | 40.0% |
| ! | GATGATCAATTTGGTGAGCT+GGG | + | chr4.3:27758888-27758907 | MS.gene56067:CDS | 40.0% |
| ! | GTGTGTATGGGTTTAGGTTT+AGG | + | chr4.3:27756208-27756227 | MS.gene56067:intron | 40.0% |
| ! | TCACAAATAGAGGCATGGAA+CGG | + | chr4.3:27757802-27757821 | MS.gene56067:intron | 40.0% |
| ! | TGATGATCAATTTGGTGAGC+TGG | + | chr4.3:27758887-27758906 | MS.gene56067:CDS | 40.0% |
| ! | TGTAGTCGTCTTTGAGTTCA+CGG | - | chr4.3:27755730-27755749 | None:intergenic | 40.0% |
| !! | GCAGTTATTTCTATAAGCCC+AGG | - | chr4.3:27758735-27758754 | None:intergenic | 40.0% |
| !! | GCTGAGGGAGTTTTAATGTT+GGG | + | chr4.3:27757035-27757054 | MS.gene56067:intron | 40.0% |
| !! | TGCTGAGGGAGTTTTAATGT+TGG | + | chr4.3:27757034-27757053 | MS.gene56067:intron | 40.0% |
| !! | TGTTGGGGATTTGCTATACT+TGG | + | chr4.3:27758147-27758166 | MS.gene56067:intron | 40.0% |
| !!! | CAGTTTTGTTTTAGGCCCTT+TGG | + | chr4.3:27756253-27756272 | MS.gene56067:intron | 40.0% |
| !!! | CCTTTTGAGTTGAAGTAGAG+TGG | + | chr4.3:27757628-27757647 | MS.gene56067:intron | 40.0% |
| !!! | GCTTCCTAAGGATTTTGGTT+AGG | + | chr4.3:27757364-27757383 | MS.gene56067:intron | 40.0% |
| AGCCTCAGAAATGCTTAGCT+TGG | + | chr4.3:27756429-27756448 | MS.gene56067:intron | 45.0% | |
| ATGCGTATAACAAGGCCCTT+TGG | + | chr4.3:27756731-27756750 | MS.gene56067:intron | 45.0% | |
| CACTTGAGGAGAAAAAGGAG+TGG | + | chr4.3:27757272-27757291 | MS.gene56067:CDS | 45.0% | |
| CCATCATTGACCACAGAAAG+AGG | - | chr4.3:27757677-27757696 | None:intergenic | 45.0% | |
| CCTCTTTCTGTGGTCAATGA+TGG | + | chr4.3:27757674-27757693 | MS.gene56067:intron | 45.0% | |
| GAACAAGGGCCTGTTTGTAT+TGG | - | chr4.3:27756473-27756492 | None:intergenic | 45.0% | |
| GATGAACTCGTCGTTCAGAA+CGG | - | chr4.3:27755867-27755886 | None:intergenic | 45.0% | |
| GCATTGCTTCAGCAGAAATG+AGG | - | chr4.3:27758317-27758336 | None:intergenic | 45.0% | |
| GCTACCATGAAAAGATACGC+TGG | + | chr4.3:27756869-27756888 | MS.gene56067:intron | 45.0% | |
| GGCATGACTCAAACATTCCA+TGG | + | chr4.3:27758049-27758068 | MS.gene56067:intron | 45.0% | |
| GGCCCATAAAACACTACATC+AGG | + | chr4.3:27757827-27757846 | MS.gene56067:intron | 45.0% | |
| TATTGATCCTGTCACACAGC+AGG | + | chr4.3:27757324-27757343 | MS.gene56067:CDS | 45.0% | |
| TCGGTAAGGATCATGCCAAA+TGG | + | chr4.3:27757176-27757195 | MS.gene56067:CDS | 45.0% | |
| TGCGTATAACAAGGCCCTTT+GGG | + | chr4.3:27756732-27756751 | MS.gene56067:intron | 45.0% | |
| TGGTGACCACTACCAAACTT+TGG | - | chr4.3:27758075-27758094 | None:intergenic | 45.0% | |
| TGTGAGGCTATCTGAAGACA+CGG | + | chr4.3:27758857-27758876 | MS.gene56067:CDS | 45.0% | |
| TTGAGATGCTTTGACTGCTC+CGG | - | chr4.3:27758793-27758812 | None:intergenic | 45.0% | |
| ! | AAGATACGCTGGGAAGTGTA+TGG | + | chr4.3:27756880-27756899 | MS.gene56067:intron | 45.0% |
| ! | ACAGGCCCTTGTTCTCATTT+TGG | + | chr4.3:27756479-27756498 | MS.gene56067:intron | 45.0% |
| ! | ATTCCTGCAGATGATGATGC+TGG | - | chr4.3:27758286-27758305 | None:intergenic | 45.0% |
| ! | CACAAATAGAGGCATGGAAC+GGG | + | chr4.3:27757803-27757822 | MS.gene56067:intron | 45.0% |
| ! | CTTCCCAGCGTATCTTTTCA+TGG | - | chr4.3:27756876-27756895 | None:intergenic | 45.0% |
| ! | TGTGATGCTTGTGATGGTGA+TGG | + | chr4.3:27755953-27755972 | MS.gene56067:CDS | 45.0% |
| !! | ACTACATCAGGATAGTGGGA+TGG | + | chr4.3:27757839-27757858 | MS.gene56067:intron | 45.0% |
| !! | GTGTATAACGGATCAGACGT+TGG | + | chr4.3:27756018-27756037 | MS.gene56067:CDS | 45.0% |
| !!! | GACATGCATGGGTTTTGTTC+TGG | + | chr4.3:27756541-27756560 | MS.gene56067:intron | 45.0% |
| ACTGAGAGCGATTGCTAGGA+AGG | + | chr4.3:27757150-27757169 | MS.gene56067:CDS | 50.0% | |
| AGGAACATCCACCGGAGTAA+CGG | - | chr4.3:27756080-27756099 | None:intergenic | 50.0% | |
| AGGTGCTTGTCCTCTTTCTG+TGG | + | chr4.3:27757664-27757683 | MS.gene56067:intron | 50.0% | |
| AGTTGCTGCTGGTGACCATT+TGG | - | chr4.3:27757194-27757213 | None:intergenic | 50.0% | |
| ATAGAAAGTGGGGGGCAAAG+TGG | + | chr4.3:27757953-27757972 | MS.gene56067:intron | 50.0% | |
| CACCGGAGTAACGGTATGAT+CGG | - | chr4.3:27756071-27756090 | None:intergenic | 50.0% | |
| CAGAAGCAATGGGAAAGCCT+GGG | + | chr4.3:27758715-27758734 | MS.gene56067:CDS | 50.0% | |
| CCACTACCAAACTTTGGCCA+TGG | - | chr4.3:27758069-27758088 | None:intergenic | 50.0% | |
| CCATGGCCAAAGTTTGGTAG+TGG | + | chr4.3:27758066-27758085 | MS.gene56067:intron | 50.0% | |
| CGTGACTGTGATGCTTGTGA+TGG | + | chr4.3:27755947-27755966 | MS.gene56067:CDS | 50.0% | |
| CTCCGATCATACCGTTACTC+CGG | + | chr4.3:27756066-27756085 | MS.gene56067:CDS | 50.0% | |
| CTGAGAGCGATTGCTAGGAA+GGG | + | chr4.3:27757151-27757170 | MS.gene56067:CDS | 50.0% | |
| GAGTTCATCGCTCACAGACT+CGG | + | chr4.3:27755878-27755897 | MS.gene56067:CDS | 50.0% | |
| TAGAAAGTGGGGGGCAAAGT+GGG | + | chr4.3:27757954-27757973 | MS.gene56067:intron | 50.0% | |
| TGAGACTGAGAGCGATTGCT+AGG | + | chr4.3:27757146-27757165 | MS.gene56067:CDS | 50.0% | |
| TGAGAGCGATTGCTAGGAAG+GGG | + | chr4.3:27757152-27757171 | MS.gene56067:CDS | 50.0% | |
| TGAGGAGAAAAAGGAGTGGG+TGG | + | chr4.3:27757276-27757295 | MS.gene56067:CDS | 50.0% | |
| TGTCCAGCATCATCATCTGC+AGG | + | chr4.3:27758280-27758299 | MS.gene56067:intron | 50.0% | |
| TGTGAAGTTGAGGAGAGGTC+AGG | + | chr4.3:27757120-27757139 | MS.gene56067:CDS | 50.0% | |
| TTCAACAAGGTCGATGGCGA+TGG | - | chr4.3:27755828-27755847 | None:intergenic | 50.0% | |
| ! | AAATAGAGGCATGGAACGGG+TGG | + | chr4.3:27757806-27757825 | MS.gene56067:intron | 50.0% |
| ! | AGTTCACGGATTTTCACGCG+CGG | - | chr4.3:27755716-27755735 | None:intergenic | 50.0% |
| ! | GCAGATGATGATGCTGGACA+TGG | - | chr4.3:27758280-27758299 | None:intergenic | 50.0% |
| !! | TCAACAGAAGCATCACCACC+AGG | - | chr4.3:27756100-27756119 | None:intergenic | 50.0% |
| ACAAGGTCGATGGCGATGGT+TGG | - | chr4.3:27755824-27755843 | None:intergenic | 55.0% | |
| ACTCACAAGCGAACGTGCCA+TGG | + | chr4.3:27755910-27755929 | MS.gene56067:CDS | 55.0% | |
| AGCAGAAGCTGGATGCTGTG+AGG | + | chr4.3:27758841-27758860 | MS.gene56067:CDS | 55.0% | |
| AGGCAAACCTGCTGTGTGAC+AGG | - | chr4.3:27757334-27757353 | None:intergenic | 55.0% | |
| ATGGCACGTTCGCTTGTGAG+TGG | - | chr4.3:27755911-27755930 | None:intergenic | 55.0% | |
| CAAGGTCGATGGCGATGGTT+GGG | - | chr4.3:27755823-27755842 | None:intergenic | 55.0% | |
| CGATCATACCGTTACTCCGG+TGG | + | chr4.3:27756069-27756088 | MS.gene56067:CDS | 55.0% | |
| CTTCGGAAATCATCACGCGC+CGG | - | chr4.3:27755799-27755818 | None:intergenic | 55.0% | |
| GATGGCGATGGTTGGGACTT+CGG | - | chr4.3:27755816-27755835 | None:intergenic | 55.0% | |
| GCAGAAGCAATGGGAAAGCC+TGG | + | chr4.3:27758714-27758733 | MS.gene56067:CDS | 55.0% | |
| GCGATTGCTAGGAAGGGGAT+CGG | + | chr4.3:27757157-27757176 | MS.gene56067:CDS | 55.0% | |
| GTTACTCCGGTGGATGTTCC+TGG | + | chr4.3:27756079-27756098 | MS.gene56067:CDS | 55.0% | |
| TCACCACCAGGAACATCCAC+CGG | - | chr4.3:27756088-27756107 | None:intergenic | 55.0% | |
| TGCTAAGTCGGTCAGCCACT+AGG | + | chr4.3:27758519-27758538 | MS.gene56067:intron | 55.0% | |
| TGCTAGGAAGGGGATCGGTA+AGG | + | chr4.3:27757162-27757181 | MS.gene56067:CDS | 55.0% | |
| ! | ACAGTCACGTGAGAAGCGCA+TGG | - | chr4.3:27755936-27755955 | None:intergenic | 55.0% |
| ! | CAGGCACTACAACGGTGTTG+CGG | - | chr4.3:27758099-27758118 | None:intergenic | 55.0% |
| ACTCCGGTGGATGTTCCTGG+TGG | + | chr4.3:27756082-27756101 | MS.gene56067:CDS | 60.0% | |
| CGCAACACCGTTGTAGTGCC+TGG | + | chr4.3:27758097-27758116 | MS.gene56067:intron | 60.0% | |
| CTGGGTGCACATATGCGAGG+AGG | + | chr4.3:27758906-27758925 | MS.gene56067:CDS | 60.0% | |
| GAGCTGGGTGCACATATGCG+AGG | + | chr4.3:27758903-27758922 | MS.gene56067:CDS | 60.0% | |
| ! | ACGTGAGAAGCGCATGGCCA+TGG | - | chr4.3:27755930-27755949 | None:intergenic | 60.0% |
| ! | GGTGGTGGTAGTTGACCCTG+AGG | + | chr4.3:27758659-27758678 | MS.gene56067:intron | 60.0% |
| !! | CACTACAACGGTGTTGCGGC+TGG | - | chr4.3:27758095-27758114 | None:intergenic | 60.0% |
| CATCACGCGCCGGAGCGCGT+TGG | - | chr4.3:27755789-27755808 | None:intergenic | 75.0% | |
| CCAGCGTCGCCAACGCGCTC+CGG | + | chr4.3:27755777-27755796 | MS.gene56067:CDS | 75.0% | |
| ! | CGCGTTGGCGACGCTGGCGT+CGG | - | chr4.3:27755774-27755793 | None:intergenic | 75.0% |
| !! | CCGGAGCGCGTTGGCGACGC+TGG | - | chr4.3:27755780-27755799 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 27755686 | 27758932 | 27755686 | ID=MS.gene56067 |
| chr4.3 | mRNA | 27755686 | 27758932 | 27755686 | ID=MS.gene56067.t1;Parent=MS.gene56067 |
| chr4.3 | exon | 27755686 | 27756131 | 27755686 | ID=MS.gene56067.t1.exon1;Parent=MS.gene56067.t1 |
| chr4.3 | CDS | 27755686 | 27756131 | 27755686 | ID=cds.MS.gene56067.t1;Parent=MS.gene56067.t1 |
| chr4.3 | exon | 27757108 | 27757345 | 27757108 | ID=MS.gene56067.t1.exon2;Parent=MS.gene56067.t1 |
| chr4.3 | CDS | 27757108 | 27757345 | 27757108 | ID=cds.MS.gene56067.t1;Parent=MS.gene56067.t1 |
| chr4.3 | exon | 27758660 | 27758932 | 27758660 | ID=MS.gene56067.t1.exon3;Parent=MS.gene56067.t1 |
| chr4.3 | CDS | 27758660 | 27758932 | 27758660 | ID=cds.MS.gene56067.t1;Parent=MS.gene56067.t1 |
| Gene Sequence |
| Protein sequence |
