Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56462.t1 | XP_003607817.1 | 99.6 | 269 | 1 | 0 | 24 | 292 | 25 | 293 | 2.40E-147 | 531.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56462.t1 | Q9SKZ1 | 84.0 | 269 | 43 | 0 | 24 | 292 | 28 | 296 | 1.2e-126 | 454.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56462.t1 | G7JHJ7 | 99.6 | 269 | 1 | 0 | 24 | 292 | 25 | 293 | 1.7e-147 | 531.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene56462 | 0.832355 | 9.91E-56 | -1.69E-46 |
| MS.gene049190 | MS.gene56462 | 0.801773 | 7.69E-49 | -1.69E-46 |
| MS.gene049341 | MS.gene56462 | 0.835188 | 1.94E-56 | -1.69E-46 |
| MS.gene049350 | MS.gene56462 | 0.833074 | 6.57E-56 | -1.69E-46 |
| MS.gene049368 | MS.gene56462 | 0.81017 | 1.32E-50 | -1.69E-46 |
| MS.gene049711 | MS.gene56462 | 0.839366 | 1.65E-57 | -1.69E-46 |
| MS.gene049807 | MS.gene56462 | 0.851179 | 1.05E-60 | -1.69E-46 |
| MS.gene049808 | MS.gene56462 | 0.843142 | 1.68E-58 | -1.69E-46 |
| MS.gene049850 | MS.gene56462 | 0.803226 | 3.86E-49 | -1.69E-46 |
| MS.gene049887 | MS.gene56462 | 0.843341 | 1.49E-58 | -1.69E-46 |
| MS.gene05016 | MS.gene56462 | 0.810597 | 1.06E-50 | -1.69E-46 |
| MS.gene050384 | MS.gene56462 | 0.830828 | 2.36E-55 | -1.69E-46 |
| MS.gene050386 | MS.gene56462 | 0.823744 | 1.17E-53 | -1.69E-46 |
| MS.gene050414 | MS.gene56462 | 0.801663 | 8.10E-49 | -1.69E-46 |
| MS.gene050551 | MS.gene56462 | 0.820942 | 5.25E-53 | -1.69E-46 |
| MS.gene050559 | MS.gene56462 | 0.807462 | 5.00E-50 | -1.69E-46 |
| MS.gene050561 | MS.gene56462 | 0.803035 | 4.22E-49 | -1.69E-46 |
| MS.gene050689 | MS.gene56462 | 0.858932 | 5.87E-63 | -1.69E-46 |
| MS.gene050807 | MS.gene56462 | 0.831104 | 2.02E-55 | -1.69E-46 |
| MS.gene050838 | MS.gene56462 | 0.830114 | 3.52E-55 | -1.69E-46 |
| MS.gene051102 | MS.gene56462 | 0.83267 | 8.28E-56 | -1.69E-46 |
| MS.gene051234 | MS.gene56462 | 0.832381 | 9.76E-56 | -1.69E-46 |
| MS.gene051279 | MS.gene56462 | 0.816059 | 6.72E-52 | -1.69E-46 |
| MS.gene051328 | MS.gene56462 | 0.809056 | 2.28E-50 | -1.69E-46 |
| MS.gene051381 | MS.gene56462 | 0.805353 | 1.39E-49 | -1.69E-46 |
| MS.gene05157 | MS.gene56462 | 0.802554 | 5.31E-49 | -1.69E-46 |
| MS.gene051701 | MS.gene56462 | 0.802886 | 4.53E-49 | -1.69E-46 |
| MS.gene051719 | MS.gene56462 | 0.84112 | 5.76E-58 | -1.69E-46 |
| MS.gene051720 | MS.gene56462 | 0.833873 | 4.15E-56 | -1.69E-46 |
| MS.gene051885 | MS.gene56462 | 0.811083 | 8.36E-51 | -1.69E-46 |
| MS.gene052072 | MS.gene56462 | 0.837735 | 4.36E-57 | -1.69E-46 |
| MS.gene052133 | MS.gene56462 | 0.843398 | 1.44E-58 | -1.69E-46 |
| MS.gene052239 | MS.gene56462 | -0.823665 | 1.23E-53 | -1.69E-46 |
| MS.gene052307 | MS.gene56462 | 0.83472 | 2.55E-56 | -1.69E-46 |
| MS.gene052335 | MS.gene56462 | 0.861442 | 1.02E-63 | -1.69E-46 |
| MS.gene052397 | MS.gene56462 | 0.84095 | 6.38E-58 | -1.69E-46 |
| MS.gene052514 | MS.gene56462 | 0.855969 | 4.42E-62 | -1.69E-46 |
| MS.gene052516 | MS.gene56462 | 0.876305 | 1.55E-68 | -1.69E-46 |
| MS.gene052609 | MS.gene56462 | 0.846594 | 1.97E-59 | -1.69E-46 |
| MS.gene052665 | MS.gene56462 | 0.821701 | 3.51E-53 | -1.69E-46 |
| MS.gene052732 | MS.gene56462 | 0.8124 | 4.32E-51 | -1.69E-46 |
| MS.gene052863 | MS.gene56462 | 0.807477 | 4.96E-50 | -1.69E-46 |
| MS.gene052879 | MS.gene56462 | 0.812546 | 4.01E-51 | -1.69E-46 |
| MS.gene053079 | MS.gene56462 | 0.826502 | 2.62E-54 | -1.69E-46 |
| MS.gene053143 | MS.gene56462 | 0.822918 | 1.83E-53 | -1.69E-46 |
| MS.gene053144 | MS.gene56462 | 0.859793 | 3.23E-63 | -1.69E-46 |
| MS.gene053581 | MS.gene56462 | 0.856199 | 3.78E-62 | -1.69E-46 |
| MS.gene053597 | MS.gene56462 | 0.817204 | 3.72E-52 | -1.69E-46 |
| MS.gene053599 | MS.gene56462 | 0.842561 | 2.40E-58 | -1.69E-46 |
| MS.gene05364 | MS.gene56462 | 0.828634 | 8.06E-55 | -1.69E-46 |
| MS.gene053678 | MS.gene56462 | 0.840776 | 7.09E-58 | -1.69E-46 |
| MS.gene054250 | MS.gene56462 | 0.840229 | 9.86E-58 | -1.69E-46 |
| MS.gene054584 | MS.gene56462 | 0.856252 | 3.65E-62 | -1.69E-46 |
| MS.gene05462 | MS.gene56462 | 0.832015 | 1.20E-55 | -1.69E-46 |
| MS.gene054651 | MS.gene56462 | 0.80713 | 5.87E-50 | -1.69E-46 |
| MS.gene055144 | MS.gene56462 | 0.82884 | 7.19E-55 | -1.69E-46 |
| MS.gene055162 | MS.gene56462 | 0.806573 | 7.71E-50 | -1.69E-46 |
| MS.gene055465 | MS.gene56462 | 0.842501 | 2.49E-58 | -1.69E-46 |
| MS.gene055466 | MS.gene56462 | 0.822681 | 2.08E-53 | -1.69E-46 |
| MS.gene055468 | MS.gene56462 | 0.836655 | 8.24E-57 | -1.69E-46 |
| MS.gene055469 | MS.gene56462 | 0.826274 | 2.97E-54 | -1.69E-46 |
| MS.gene055512 | MS.gene56462 | 0.849346 | 3.43E-60 | -1.69E-46 |
| MS.gene055537 | MS.gene56462 | 0.805253 | 1.46E-49 | -1.69E-46 |
| MS.gene055580 | MS.gene56462 | -0.822734 | 2.02E-53 | -1.69E-46 |
| MS.gene055890 | MS.gene56462 | 0.819628 | 1.05E-52 | -1.69E-46 |
| MS.gene055891 | MS.gene56462 | 0.856941 | 2.29E-62 | -1.69E-46 |
| MS.gene055979 | MS.gene56462 | 0.808675 | 2.76E-50 | -1.69E-46 |
| MS.gene056005 | MS.gene56462 | 0.81676 | 4.68E-52 | -1.69E-46 |
| MS.gene056043 | MS.gene56462 | -0.817855 | 2.66E-52 | -1.69E-46 |
| MS.gene056308 | MS.gene56462 | 0.83983 | 1.25E-57 | -1.69E-46 |
| MS.gene056507 | MS.gene56462 | 0.81294 | 3.29E-51 | -1.69E-46 |
| MS.gene057287 | MS.gene56462 | 0.842444 | 2.58E-58 | -1.69E-46 |
| MS.gene057446 | MS.gene56462 | 0.802298 | 6.00E-49 | -1.69E-46 |
| MS.gene057705 | MS.gene56462 | 0.80554 | 1.27E-49 | -1.69E-46 |
| MS.gene057915 | MS.gene56462 | 0.809321 | 2.01E-50 | -1.69E-46 |
| MS.gene058008 | MS.gene56462 | 0.821151 | 4.70E-53 | -1.69E-46 |
| MS.gene058009 | MS.gene56462 | 0.832099 | 1.15E-55 | -1.69E-46 |
| MS.gene058010 | MS.gene56462 | 0.806255 | 8.99E-50 | -1.69E-46 |
| MS.gene058054 | MS.gene56462 | 0.803455 | 3.46E-49 | -1.69E-46 |
| MS.gene058055 | MS.gene56462 | 0.802491 | 5.47E-49 | -1.69E-46 |
| MS.gene058149 | MS.gene56462 | 0.822516 | 2.27E-53 | -1.69E-46 |
| MS.gene058330 | MS.gene56462 | 0.806756 | 7.05E-50 | -1.69E-46 |
| MS.gene058852 | MS.gene56462 | 0.822884 | 1.87E-53 | -1.69E-46 |
| MS.gene058945 | MS.gene56462 | 0.822372 | 2.45E-53 | -1.69E-46 |
| MS.gene059171 | MS.gene56462 | 0.811129 | 8.17E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene56462 | 0.802277 | 6.05E-49 | -1.69E-46 |
| MS.gene05978 | MS.gene56462 | 0.853055 | 3.08E-61 | -1.69E-46 |
| MS.gene059965 | MS.gene56462 | 0.810052 | 1.40E-50 | -1.69E-46 |
| MS.gene060194 | MS.gene56462 | 0.816204 | 6.24E-52 | -1.69E-46 |
| MS.gene060587 | MS.gene56462 | 0.854515 | 1.17E-61 | -1.69E-46 |
| MS.gene061006 | MS.gene56462 | 0.800298 | 1.54E-48 | -1.69E-46 |
| MS.gene061100 | MS.gene56462 | 0.816739 | 4.73E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56462.t1 | MTR_4g083230 | 98.976 | 293 | 2 | 1 | 1 | 292 | 1 | 293 | 0.0 | 581 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56462.t1 | AT2G32080 | 84.444 | 270 | 41 | 1 | 23 | 292 | 27 | 295 | 2.06e-167 | 466 |
| MS.gene56462.t1 | AT2G32080 | 83.704 | 270 | 44 | 0 | 23 | 292 | 27 | 296 | 1.64e-166 | 464 |
Find 87 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCCAGCTCAGGATGAAAT+TGG | 0.220182 | 4.4:+29842866 | MS.gene56462:CDS |
| TTCCTTTCTCCGGCATTTCC+TGG | 0.262031 | 4.4:+29839582 | MS.gene56462:CDS |
| GTTATTTCATTGCAGGTTGC+AGG | 0.287453 | 4.4:+29843068 | MS.gene56462:intron |
| GTTGGTGCTGGCTTCATATC+TGG | 0.289736 | 4.4:+29842788 | MS.gene56462:CDS |
| CCTCAGATATTCTTAGAAAA+TGG | 0.311616 | 4.4:-29842964 | None:intergenic |
| TAGAAGAGGCCGTTTCTTAA+AGG | 0.313607 | 4.4:+29839934 | MS.gene56462:CDS |
| TTGATCTTGGGAACAACAAT+AGG | 0.316191 | 4.4:+29842939 | MS.gene56462:CDS |
| GGTGGTGGTGGCGGCGGTGG+TGG | 0.334359 | 4.4:+29839401 | MS.gene56462:CDS |
| GCGTAGATGGAGGGAAGCTC+CGG | 0.341711 | 4.4:+29839377 | None:intergenic |
| ATGAAGGGTGGGCAGCATTC+AGG | 0.344998 | 4.4:+29842557 | MS.gene56462:CDS |
| TCAATCATTCTTCCATTGTC+GGG | 0.356300 | 4.4:+29843104 | MS.gene56462:CDS |
| TTGTTCCTGCAGGAAGTTCC+AGG | 0.375829 | 4.4:+29842533 | MS.gene56462:CDS |
| CTCAATCATTCTTCCATTGT+CGG | 0.380080 | 4.4:+29843103 | MS.gene56462:CDS |
| TGATCTTGGGAACAACAATA+GGG | 0.389790 | 4.4:+29842940 | MS.gene56462:CDS |
| GGCAGCATTCAGGAACATTC+TGG | 0.414246 | 4.4:+29842567 | MS.gene56462:CDS |
| ACCATCATCGTTCCTTTCTC+CGG | 0.417144 | 4.4:+29839572 | MS.gene56462:CDS |
| GGTAGCAGCGGTGGAGGTGG+TGG | 0.419728 | 4.4:+29839422 | MS.gene56462:CDS |
| AAGCAGTTTCATGAGATTGT+TGG | 0.420908 | 4.4:+29843131 | MS.gene56462:CDS |
| CATACCCTCAATTCGGTCCT+TGG | 0.435320 | 4.4:-29843171 | None:intergenic |
| GTCGGTTGATTTGCCAGCTC+AGG | 0.437800 | 4.4:+29842856 | MS.gene56462:CDS |
| CGTAGATGGAGGGAAGCTCC+GGG | 0.443509 | 4.4:+29839378 | None:intergenic |
| TGCTGCCCACCCTTCATCCC+TGG | 0.445063 | 4.4:-29842551 | None:intergenic |
| ATGAAACCTGATTCGGAAGA+AGG | 0.447366 | 4.4:-29842618 | None:intergenic |
| AGCAGCGGTGGAGGTGGTGG+TGG | 0.447508 | 4.4:+29839425 | MS.gene56462:CDS |
| TCAGGATGAAATTGGGAACT+TGG | 0.448346 | 4.4:+29842874 | MS.gene56462:CDS |
| CTTTCAGATGATGTTGGTGC+TGG | 0.450565 | 4.4:+29842776 | MS.gene56462:CDS |
| AATTTAGCATTCATCTTTGA+GGG | 0.451848 | 4.4:-29843223 | None:intergenic |
| TTGATCAGCTCTGATCACTT+TGG | 0.454267 | 4.4:-29842903 | None:intergenic |
| TGAGATTGTTGGTCACTTTG+TGG | 0.454440 | 4.4:+29843142 | MS.gene56462:CDS |
| CAATTTAGCATTCATCTTTG+AGG | 0.455509 | 4.4:-29843224 | None:intergenic |
| ACCGCCGCCACCACCACCCC+CGG | 0.458721 | 4.4:-29839396 | None:intergenic |
| GGTGGTAGCAGCGGTGGAGG+TGG | 0.460366 | 4.4:+29839419 | MS.gene56462:CDS |
| TGCCAGCTCAGGATGAAATT+GGG | 0.464017 | 4.4:+29842867 | MS.gene56462:CDS |
| CAAAAGAATGAAACCTGATT+CGG | 0.468159 | 4.4:-29842625 | None:intergenic |
| ATCAAGAAACCAGGAAATGC+CGG | 0.469535 | 4.4:-29839591 | None:intergenic |
| GGTGGTGGTAGCAGCGGTGG+AGG | 0.475262 | 4.4:+29839416 | MS.gene56462:CDS |
| GCAGGAAGTTCCAGGGATGA+AGG | 0.480780 | 4.4:+29842541 | MS.gene56462:CDS |
| AACCAGGAAATGCCGGAGAA+AGG | 0.481593 | 4.4:-29839584 | None:intergenic |
| TAGATGGAGGGAAGCTCCGG+GGG | 0.484528 | 4.4:+29839380 | None:intergenic |
| CAGGATGAAATTGGGAACTT+GGG | 0.489960 | 4.4:+29842875 | MS.gene56462:CDS |
| TGTCTGAAGCTTCTGTCAGC+AGG | 0.503389 | 4.4:+29842494 | MS.gene56462:CDS |
| CGACTACTTTCAGATGATGT+TGG | 0.519100 | 4.4:+29842770 | MS.gene56462:CDS |
| CAATTATTATGTTAATTCTG+AGG | 0.522336 | 4.4:+29839619 | MS.gene56462:CDS |
| CAACTGACATACCCTCAATT+CGG | 0.522913 | 4.4:-29843178 | None:intergenic |
| AGGTGGTGGTGGTGCTGACG+TGG | 0.524355 | 4.4:+29839436 | MS.gene56462:CDS |
| TTCCCAATTTCATCCTGAGC+TGG | 0.526038 | 4.4:-29842869 | None:intergenic |
| TGGATATTGGCGTAGATGGA+GGG | 0.535298 | 4.4:+29839368 | None:intergenic |
| AAGTAAGTACCTTTAAGAAA+CGG | 0.537669 | 4.4:-29839943 | None:intergenic |
| AATCACCAAGGACCGAATTG+AGG | 0.544438 | 4.4:+29843166 | MS.gene56462:CDS |
| AGCACTATAATTGTTCCTGC+AGG | 0.545453 | 4.4:+29842523 | MS.gene56462:CDS |
| ACAGCAAAATTCTGAATCCT+CGG | 0.546233 | 4.4:+29842745 | MS.gene56462:intron |
| ATCACCAAGGACCGAATTGA+GGG | 0.546646 | 4.4:+29843167 | MS.gene56462:CDS |
| CTTCTGAATTGAATGTGGAC+AGG | 0.549374 | 4.4:+29842834 | MS.gene56462:CDS |
| GGCGGTGGTGGTAGCAGCGG+TGG | 0.549557 | 4.4:+29839413 | MS.gene56462:CDS |
| TCATCCCTGGAACTTCCTGC+AGG | 0.551352 | 4.4:-29842538 | None:intergenic |
| AAGTTCCAGGGATGAAGGGT+GGG | 0.558834 | 4.4:+29842546 | MS.gene56462:CDS |
| CGACAATGGAAGAATGATTG+AGG | 0.563454 | 4.4:-29843102 | None:intergenic |
| CACATTCAATTCAGAAGAGG+TGG | 0.568175 | 4.4:-29842828 | None:intergenic |
| TCTTTGTAAGACGTTACAAG+TGG | 0.569662 | 4.4:+29839463 | MS.gene56462:CDS |
| GGCGGCGGTGGTGGTAGCAG+CGG | 0.571188 | 4.4:+29839410 | MS.gene56462:CDS |
| CAATCATTCTTCCATTGTCG+GGG | 0.572962 | 4.4:+29843105 | MS.gene56462:CDS |
| TTCAATTCAGAAGAGGTGGC+AGG | 0.574176 | 4.4:-29842824 | None:intergenic |
| CAGGAAGTTCCAGGGATGAA+GGG | 0.577060 | 4.4:+29842542 | MS.gene56462:CDS |
| GAAGTTCCAGGGATGAAGGG+TGG | 0.581907 | 4.4:+29842545 | MS.gene56462:CDS |
| GACATTGGAGAGAATAGAAG+AGG | 0.584768 | 4.4:+29839920 | MS.gene56462:CDS |
| CAGGAACAATTATAGTGCTA+CGG | 0.587717 | 4.4:-29842519 | None:intergenic |
| GCCGGAGAAAGGAACGATGA+TGG | 0.588635 | 4.4:-29839573 | None:intergenic |
| TGTTCCTGCAGGAAGTTCCA+GGG | 0.590512 | 4.4:+29842534 | MS.gene56462:CDS |
| TTTAGCATTCATCTTTGAGG+GGG | 0.591689 | 4.4:-29843221 | None:intergenic |
| AACTGCTTGAGCCCCGACAA+TGG | 0.592807 | 4.4:-29843116 | None:intergenic |
| AGGATGAAATTGGGAACTTG+GGG | 0.593840 | 4.4:+29842876 | MS.gene56462:CDS |
| GGAATTGCAGCTTGATACCA+AGG | 0.607576 | 4.4:+29839661 | MS.gene56462:CDS |
| GTAGATGGAGGGAAGCTCCG+GGG | 0.608536 | 4.4:+29839379 | None:intergenic |
| GGATGAAATTGGGAACTTGG+GGG | 0.621343 | 4.4:+29842877 | MS.gene56462:CDS |
| CACCTCTTCTGAATTGAATG+TGG | 0.629994 | 4.4:+29842829 | MS.gene56462:CDS |
| GTCCACATTCAATTCAGAAG+AGG | 0.634204 | 4.4:-29842831 | None:intergenic |
| ATTTAGCATTCATCTTTGAG+GGG | 0.653146 | 4.4:-29843222 | None:intergenic |
| GATGGTAGACCTAGTAGCAG+AGG | 0.654078 | 4.4:-29839555 | None:intergenic |
| TGAATTGAATGTGGACAGGT+CGG | 0.657373 | 4.4:+29842838 | MS.gene56462:CDS |
| GATCTTGGGAACAACAATAG+GGG | 0.659904 | 4.4:+29842941 | MS.gene56462:CDS |
| ATTGAAGAGATCAAGAAACC+AGG | 0.668036 | 4.4:-29839600 | None:intergenic |
| ATCTGAAAGTAGTCGCTCCG+AGG | 0.679752 | 4.4:-29842762 | None:intergenic |
| TCACTTTGTGGAAATCACCA+AGG | 0.693256 | 4.4:+29843154 | MS.gene56462:CDS |
| CGGAAGAAGGAAAAGCCTCG+AGG | 0.708267 | 4.4:-29842605 | None:intergenic |
| ATCTTAAGGTAACGACCACG+AGG | 0.728305 | 4.4:-29839521 | None:intergenic |
| CAGAGATTAATGAAGCCTCG+AGG | 0.735251 | 4.4:+29842590 | MS.gene56462:CDS |
| GATCTGAAAGAGAATCCTCG+TGG | 0.761890 | 4.4:+29839506 | MS.gene56462:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAATTACTATTTCAAA+CGG | + | chr4.4:29841336-29841355 | MS.gene56462:intron | 10.0% |
| !!! | AATTTTTATGTTATGTTTTT+TGG | - | chr4.4:29841325-29841344 | None:intergenic | 10.0% |
| !!! | ATTTTTATGTTATGTTTTTT+GGG | - | chr4.4:29841324-29841343 | None:intergenic | 10.0% |
| !! | AATTCCTTAATATTCTATAT+AGG | + | chr4.4:29841654-29841673 | MS.gene56462:intron | 15.0% |
| !! | CAAAAAAAAATAAAAAATCC+AGG | - | chr4.4:29840860-29840879 | None:intergenic | 15.0% |
| !! | TAATTACATAAGTATTTCAA+GGG | + | chr4.4:29842005-29842024 | MS.gene56462:intron | 15.0% |
| !! | TTAATTACATAAGTATTTCA+AGG | + | chr4.4:29842004-29842023 | MS.gene56462:intron | 15.0% |
| !!! | AGTAAAAAAAATGCTATTTT+TGG | + | chr4.4:29841460-29841479 | MS.gene56462:intron | 15.0% |
| !!! | TAATTATTGTTTTATGTTTC+AGG | + | chr4.4:29839886-29839905 | MS.gene56462:intron | 15.0% |
| !! | CAATTATTATGTTAATTCTG+AGG | + | chr4.4:29839619-29839638 | MS.gene56462:CDS | 20.0% |
| !! | GTTAAAAATATTCTTCATTG+CGG | - | chr4.4:29840190-29840209 | None:intergenic | 20.0% |
| !! | TTAATTTCTCATCATAAACA+GGG | - | chr4.4:29840517-29840536 | None:intergenic | 20.0% |
| !!! | AAAAGATTTTTCTTTGATCT+TGG | + | chr4.4:29842926-29842945 | MS.gene56462:CDS | 20.0% |
| !!! | AAAGATTTTTCTTTGATCTT+GGG | + | chr4.4:29842927-29842946 | MS.gene56462:CDS | 20.0% |
| !!! | AAGATAACAACTTTTTATGA+GGG | - | chr4.4:29842353-29842372 | None:intergenic | 20.0% |
| !!! | AATTAGTTTAAGTGTATGTT+TGG | - | chr4.4:29839830-29839849 | None:intergenic | 20.0% |
| !!! | AATTTTTGTTATTTCATTGC+AGG | + | chr4.4:29843061-29843080 | MS.gene56462:intron | 20.0% |
| !!! | AGTATTTCAAGTGTAATTAT+AGG | + | chr4.4:29842149-29842168 | MS.gene56462:intron | 20.0% |
| !!! | ATTAAAACAATTTAGGTTCA+AGG | - | chr4.4:29842311-29842330 | None:intergenic | 20.0% |
| !!! | ATTTTACGTATAATTGGTAA+GGG | - | chr4.4:29842274-29842293 | None:intergenic | 20.0% |
| !!! | ATTTTACGTTGAGTATTTTA+GGG | + | chr4.4:29840944-29840963 | MS.gene56462:intron | 20.0% |
| !!! | CATTTTGTATTAGAAGTTTA+GGG | + | chr4.4:29841092-29841111 | MS.gene56462:intron | 20.0% |
| !!! | TATTTTACGTTGAGTATTTT+AGG | + | chr4.4:29840943-29840962 | MS.gene56462:intron | 20.0% |
| !!! | TCATTTTGTATTAGAAGTTT+AGG | + | chr4.4:29841091-29841110 | MS.gene56462:intron | 20.0% |
| !!! | TTTAATTTCTCATCATAAAC+AGG | - | chr4.4:29840518-29840537 | None:intergenic | 20.0% |
| !!! | TTTTAAACAGAGAAAATAGA+AGG | - | chr4.4:29840923-29840942 | None:intergenic | 20.0% |
| ! | AAGAATAATCACAAAATCCT+AGG | - | chr4.4:29841822-29841841 | None:intergenic | 25.0% |
| ! | AAGGAAATTGAGTTATTATG+CGG | + | chr4.4:29840139-29840158 | MS.gene56462:intron | 25.0% |
| ! | ACAAACTGTAACAAAACAAA+GGG | + | chr4.4:29841399-29841418 | MS.gene56462:intron | 25.0% |
| ! | ACACATCAAAAAAGATAACT+TGG | - | chr4.4:29842695-29842714 | None:intergenic | 25.0% |
| ! | AGAATCGTTAAATTAATCGT+AGG | - | chr4.4:29842238-29842257 | None:intergenic | 25.0% |
| ! | ATAATACTACTGTAAGATCT+AGG | + | chr4.4:29840325-29840344 | MS.gene56462:intron | 25.0% |
| ! | ATTATGTACTGTGCAATAAA+GGG | - | chr4.4:29840893-29840912 | None:intergenic | 25.0% |
| ! | ATTGCACAGTACATAATATA+CGG | + | chr4.4:29840896-29840915 | MS.gene56462:intron | 25.0% |
| ! | ATTTGGGAATTTCTATCTAA+TGG | + | chr4.4:29842407-29842426 | MS.gene56462:intron | 25.0% |
| ! | CTTACGTATTATGTGTATTT+GGG | + | chr4.4:29842391-29842410 | MS.gene56462:intron | 25.0% |
| ! | GAACATAAGAACAATAAAAC+CGG | + | chr4.4:29841585-29841604 | MS.gene56462:intron | 25.0% |
| ! | GAAGGACAATAAAAACATAA+TGG | - | chr4.4:29842997-29843016 | None:intergenic | 25.0% |
| ! | GACACCTATATAGAATATTA+AGG | - | chr4.4:29841661-29841680 | None:intergenic | 25.0% |
| ! | TAATCAATTGTGTAGGTAAT+AGG | - | chr4.4:29840733-29840752 | None:intergenic | 25.0% |
| ! | TAATTTCTCATCATAAACAG+GGG | - | chr4.4:29840516-29840535 | None:intergenic | 25.0% |
| ! | TACAACAAAATAAAGGAAGA+AGG | - | chr4.4:29843015-29843034 | None:intergenic | 25.0% |
| ! | TACATGCATATAAAATAGCA+TGG | - | chr4.4:29842189-29842208 | None:intergenic | 25.0% |
| ! | TAGCCTCATTAAAACAATTT+AGG | - | chr4.4:29842318-29842337 | None:intergenic | 25.0% |
| ! | TATTATGTACTGTGCAATAA+AGG | - | chr4.4:29840894-29840913 | None:intergenic | 25.0% |
| ! | TGAAGATTAATCAATTGTGT+AGG | - | chr4.4:29840740-29840759 | None:intergenic | 25.0% |
| ! | TGGAATTTCTGATTTATCTT+AGG | + | chr4.4:29840565-29840584 | MS.gene56462:intron | 25.0% |
| !! | AAAGATAACTTGGAAAGTTT+TGG | - | chr4.4:29842685-29842704 | None:intergenic | 25.0% |
| !! | AAGTAAGTACCTTTAAGAAA+CGG | - | chr4.4:29839946-29839965 | None:intergenic | 25.0% |
| !! | ATCAGGATTTTACGTATAAT+TGG | - | chr4.4:29842280-29842299 | None:intergenic | 25.0% |
| !! | CAAGATAACAACTTTTTATG+AGG | - | chr4.4:29842354-29842373 | None:intergenic | 25.0% |
| !! | CGAGAAATGGAAATTTTATT+TGG | + | chr4.4:29840243-29840262 | MS.gene56462:intron | 25.0% |
| !! | CTTTTATGTTTCAACTTTCA+AGG | + | chr4.4:29841496-29841515 | MS.gene56462:intron | 25.0% |
| !! | GATTTTACGTATAATTGGTA+AGG | - | chr4.4:29842275-29842294 | None:intergenic | 25.0% |
| !! | GTATCAACTGATTCTATTTA+TGG | + | chr4.4:29840004-29840023 | MS.gene56462:intron | 25.0% |
| !! | TTTTACGTATAATTGGTAAG+GGG | - | chr4.4:29842273-29842292 | None:intergenic | 25.0% |
| !!! | AAAATGCTATTTTTGGAGAA+TGG | + | chr4.4:29841467-29841486 | MS.gene56462:intron | 25.0% |
| !!! | AATTTTTGGAAAATCACTGT+GGG | + | chr4.4:29839767-29839786 | MS.gene56462:intron | 25.0% |
| !!! | AGGTTTTTTCAGAAATCTTA+AGG | - | chr4.4:29839538-29839557 | None:intergenic | 25.0% |
| !!! | ATTTTAAGACATGCACAAAT+GGG | + | chr4.4:29841376-29841395 | MS.gene56462:intron | 25.0% |
| !!! | CCTTTATTTTGTTGTAGTTT+GGG | + | chr4.4:29843019-29843038 | MS.gene56462:intron | 25.0% |
| !!! | GAACCTAAATTGTTTTAATG+AGG | + | chr4.4:29842312-29842331 | MS.gene56462:intron | 25.0% |
| !!! | TAATTTTTGGAAAATCACTG+TGG | + | chr4.4:29839766-29839785 | MS.gene56462:intron | 25.0% |
| !!! | TAGGATTTTGGGATTAAAAT+CGG | - | chr4.4:29841803-29841822 | None:intergenic | 25.0% |
| !!! | TCCTTTATTTTGTTGTAGTT+TGG | + | chr4.4:29843018-29843037 | MS.gene56462:intron | 25.0% |
| !!! | TTTGATGATGATATGCTTAA+AGG | + | chr4.4:29840620-29840639 | MS.gene56462:intron | 25.0% |
| !!! | TTTTACGTTGAGTATTTTAG+GGG | + | chr4.4:29840945-29840964 | MS.gene56462:intron | 25.0% |
| AAGAGAAATTAAGTGGGAAA+CGG | - | chr4.4:29840820-29840839 | None:intergenic | 30.0% | |
| ACATAATACGTAAGCCTAAA+AGG | - | chr4.4:29842385-29842404 | None:intergenic | 30.0% | |
| AGAATCATTTCACAGAAAAG+TGG | - | chr4.4:29841901-29841920 | None:intergenic | 30.0% | |
| AGGAAATTGAGTTATTATGC+GGG | + | chr4.4:29840140-29840159 | MS.gene56462:intron | 30.0% | |
| AGTCAGAAGAGAAATTAAGT+GGG | - | chr4.4:29840826-29840845 | None:intergenic | 30.0% | |
| ATAAATCAGAAATTCCACCA+CGG | - | chr4.4:29840562-29840581 | None:intergenic | 30.0% | |
| ATAGGTGTCTGTTAATAAAG+TGG | + | chr4.4:29841672-29841691 | MS.gene56462:intron | 30.0% | |
| ATATTCTTCATTGCGGTAAA+AGG | - | chr4.4:29840183-29840202 | None:intergenic | 30.0% | |
| CAAAAGAATGAAACCTGATT+CGG | - | chr4.4:29842628-29842647 | None:intergenic | 30.0% | |
| CAAACAAACAAGTTGTGAAA+TGG | - | chr4.4:29840223-29840242 | None:intergenic | 30.0% | |
| CAAACTGTAACAAAACAAAG+GGG | + | chr4.4:29841400-29841419 | MS.gene56462:intron | 30.0% | |
| CAATGAAATTCAAAGCAACT+AGG | + | chr4.4:29840051-29840070 | MS.gene56462:intron | 30.0% | |
| CCCAAACTACAACAAAATAA+AGG | - | chr4.4:29843022-29843041 | None:intergenic | 30.0% | |
| CCTCAGATATTCTTAGAAAA+TGG | - | chr4.4:29842967-29842986 | None:intergenic | 30.0% | |
| CTAGTAATCATGTGAGAAAA+AGG | - | chr4.4:29839862-29839881 | None:intergenic | 30.0% | |
| GACAAACTGTAACAAAACAA+AGG | + | chr4.4:29841398-29841417 | MS.gene56462:intron | 30.0% | |
| GCTTACGTATTATGTGTATT+TGG | + | chr4.4:29842390-29842409 | MS.gene56462:intron | 30.0% | |
| GTATACACAAAATCCCAATT+TGG | + | chr4.4:29841859-29841878 | MS.gene56462:intron | 30.0% | |
| GTGAAATGATTCTACGATTA+TGG | + | chr4.4:29841908-29841927 | MS.gene56462:intron | 30.0% | |
| GTGTGATTTATACATGTTGA+AGG | - | chr4.4:29840692-29840711 | None:intergenic | 30.0% | |
| GTTTCCAATTAACCTAAACA+TGG | + | chr4.4:29841766-29841785 | MS.gene56462:intron | 30.0% | |
| TAATCATGTGAGAAAAAGGA+GGG | - | chr4.4:29839858-29839877 | None:intergenic | 30.0% | |
| TACTCATAATTCACTTCACT+TGG | + | chr4.4:29839684-29839703 | MS.gene56462:intron | 30.0% | |
| TAGGTATGTCATTAGTATTG+TGG | - | chr4.4:29840714-29840733 | None:intergenic | 30.0% | |
| TCAAACGGTAACAAAACAAA+GGG | + | chr4.4:29841351-29841370 | MS.gene56462:intron | 30.0% | |
| TCAATTTCCTTATACCTCAT+GGG | - | chr4.4:29840130-29840149 | None:intergenic | 30.0% | |
| TCTAATACAAAATGATCACC+TGG | - | chr4.4:29841086-29841105 | None:intergenic | 30.0% | |
| TCTGGCAACATGAATATAAA+AGG | - | chr4.4:29840985-29841004 | None:intergenic | 30.0% | |
| TTAATTGGAAACACCAATAC+CGG | - | chr4.4:29841758-29841777 | None:intergenic | 30.0% | |
| TTATGTACTGTGCAATAAAG+GGG | - | chr4.4:29840892-29840911 | None:intergenic | 30.0% | |
| TTCAAACGGTAACAAAACAA+AGG | + | chr4.4:29841350-29841369 | MS.gene56462:intron | 30.0% | |
| TTCTAATTTCACATCATTCC+TGG | + | chr4.4:29840350-29840369 | MS.gene56462:intron | 30.0% | |
| TTTACGTATAATTGGTAAGG+GGG | - | chr4.4:29842272-29842291 | None:intergenic | 30.0% | |
| ! | ACTACCATGTTTAGGTTAAT+TGG | - | chr4.4:29841773-29841792 | None:intergenic | 30.0% |
| ! | AGAAGCTAGAGTGTAATTTT+TGG | + | chr4.4:29839753-29839772 | MS.gene56462:intron | 30.0% |
| ! | AGGGAAAACTCTTCTATTTT+TGG | + | chr4.4:29841166-29841185 | MS.gene56462:intron | 30.0% |
| ! | ATAACAACTTTTTATGAGGG+AGG | - | chr4.4:29842350-29842369 | None:intergenic | 30.0% |
| ! | ATCACAAAATCCTAGGATTT+TGG | - | chr4.4:29841815-29841834 | None:intergenic | 30.0% |
| ! | ATTTTGTGTATACTCGTACT+TGG | - | chr4.4:29841852-29841871 | None:intergenic | 30.0% |
| ! | GCTTGATTTTGTTCAATTCT+AGG | - | chr4.4:29841216-29841235 | None:intergenic | 30.0% |
| ! | GTGTTTGAGTAGACTTATTT+TGG | + | chr4.4:29840413-29840432 | MS.gene56462:intron | 30.0% |
| ! | TAACAACTTTTTATGAGGGA+GGG | - | chr4.4:29842349-29842368 | None:intergenic | 30.0% |
| ! | TCACAAAATCCTAGGATTTT+GGG | - | chr4.4:29841814-29841833 | None:intergenic | 30.0% |
| !! | CCATTTTCTAAGAATATCTG+AGG | + | chr4.4:29842964-29842983 | MS.gene56462:CDS | 30.0% |
| !! | GATTTTAATCCCAAAATCCT+AGG | + | chr4.4:29841802-29841821 | MS.gene56462:intron | 30.0% |
| !!! | AGGATTTTGGGATTAAAATC+GGG | - | chr4.4:29841802-29841821 | None:intergenic | 30.0% |
| !!! | ATCTTGTTTTGCATCCTTTT+AGG | + | chr4.4:29842368-29842387 | MS.gene56462:intron | 30.0% |
| !!! | CATTTTAAGACATGCACAAA+TGG | + | chr4.4:29841375-29841394 | MS.gene56462:intron | 30.0% |
| !!! | CTCTACTTTTTTTTTTGCGA+AGG | + | chr4.4:29842471-29842490 | MS.gene56462:intron | 30.0% |
| AAAAAATCCAGGCTCTATCT+AGG | - | chr4.4:29840849-29840868 | None:intergenic | 35.0% | |
| AAAACGTTTGCAATCAACTC+CGG | + | chr4.4:29841736-29841755 | MS.gene56462:intron | 35.0% | |
| AAGCAGTTTCATGAGATTGT+TGG | + | chr4.4:29843131-29843150 | MS.gene56462:CDS | 35.0% | |
| AATCATGTGAGAAAAAGGAG+GGG | - | chr4.4:29839857-29839876 | None:intergenic | 35.0% | |
| ACAGCAAAATTCTGAATCCT+CGG | + | chr4.4:29842745-29842764 | MS.gene56462:intron | 35.0% | |
| ACTTGTTTGTTTGCGAGAAA+TGG | + | chr4.4:29840230-29840249 | MS.gene56462:intron | 35.0% | |
| AGAGAAATTAAGTGGGAAAC+GGG | - | chr4.4:29840819-29840838 | None:intergenic | 35.0% | |
| ATACAGGATTCCACCAAATT+GGG | - | chr4.4:29841875-29841894 | None:intergenic | 35.0% | |
| ATCGGATAGGAACAATAATC+TGG | - | chr4.4:29841003-29841022 | None:intergenic | 35.0% | |
| ATTGAAGAGATCAAGAAACC+AGG | - | chr4.4:29839603-29839622 | None:intergenic | 35.0% | |
| ATTGTGATTATGGCATACTC+AGG | + | chr4.4:29839798-29839817 | MS.gene56462:intron | 35.0% | |
| CAGGAACAATTATAGTGCTA+CGG | - | chr4.4:29842522-29842541 | None:intergenic | 35.0% | |
| CATGCAAAAACAACAGAAAG+CGG | - | chr4.4:29841134-29841153 | None:intergenic | 35.0% | |
| CTCAATCATTCTTCCATTGT+CGG | + | chr4.4:29843103-29843122 | MS.gene56462:CDS | 35.0% | |
| CTCAATTTCCTTATACCTCA+TGG | - | chr4.4:29840131-29840150 | None:intergenic | 35.0% | |
| GAAGTGAATTATGAGTACCT+TGG | - | chr4.4:29839681-29839700 | None:intergenic | 35.0% | |
| GAGTCAGAAGAGAAATTAAG+TGG | - | chr4.4:29840827-29840846 | None:intergenic | 35.0% | |
| GCGAAGTTGTTGAAGATTTA+TGG | - | chr4.4:29840646-29840665 | None:intergenic | 35.0% | |
| GTAATCATGTGAGAAAAAGG+AGG | - | chr4.4:29839859-29839878 | None:intergenic | 35.0% | |
| TACACAAAATCCCAATTTGG+TGG | + | chr4.4:29841862-29841881 | MS.gene56462:intron | 35.0% | |
| TATACAGGATTCCACCAAAT+TGG | - | chr4.4:29841876-29841895 | None:intergenic | 35.0% | |
| TATGTACTGTGCAATAAAGG+GGG | - | chr4.4:29840891-29840910 | None:intergenic | 35.0% | |
| TCAATCATTCTTCCATTGTC+GGG | + | chr4.4:29843104-29843123 | MS.gene56462:CDS | 35.0% | |
| TCTTACGAGTCTCAAGTTTA+AGG | - | chr4.4:29841279-29841298 | None:intergenic | 35.0% | |
| TCTTTGTAAGACGTTACAAG+TGG | + | chr4.4:29839463-29839482 | MS.gene56462:CDS | 35.0% | |
| TGATCTTGGGAACAACAATA+GGG | + | chr4.4:29842940-29842959 | MS.gene56462:CDS | 35.0% | |
| TGTTTGGTATGTCAGAATCA+TGG | + | chr4.4:29839711-29839730 | MS.gene56462:intron | 35.0% | |
| TTGAGACTCGTAAGAGTTTA+TGG | + | chr4.4:29841284-29841303 | MS.gene56462:intron | 35.0% | |
| TTGATCTTGGGAACAACAAT+AGG | + | chr4.4:29842939-29842958 | MS.gene56462:CDS | 35.0% | |
| TTGTGATTATGGCATACTCA+GGG | + | chr4.4:29839799-29839818 | MS.gene56462:intron | 35.0% | |
| TTTAGGGATGTTGCCATTAT+TGG | + | chr4.4:29841108-29841127 | MS.gene56462:intron | 35.0% | |
| ! | CAGGTTTTCTACTTTGACAT+TGG | + | chr4.4:29839905-29839924 | MS.gene56462:intron | 35.0% |
| ! | GTGGCATTTGAATTTTGTGA+CGG | + | chr4.4:29841691-29841710 | MS.gene56462:intron | 35.0% |
| ! | TGGATTTTGCAGTAAATGCT+GGG | + | chr4.4:29840263-29840282 | MS.gene56462:intron | 35.0% |
| ! | TGGCATTTGAATTTTGTGAC+GGG | + | chr4.4:29841692-29841711 | MS.gene56462:intron | 35.0% |
| ! | TTGGATTTTGCAGTAAATGC+TGG | + | chr4.4:29840262-29840281 | MS.gene56462:intron | 35.0% |
| !!! | GGATTTTGACTACCATGTTT+AGG | - | chr4.4:29841781-29841800 | None:intergenic | 35.0% |
| ACCTTCAAACCCACTTTGAA+GGG | - | chr4.4:29841031-29841050 | None:intergenic | 40.0% | |
| AGCACTATAATTGTTCCTGC+AGG | + | chr4.4:29842523-29842542 | MS.gene56462:CDS | 40.0% | |
| AGGATGAAATTGGGAACTTG+GGG | + | chr4.4:29842876-29842895 | MS.gene56462:CDS | 40.0% | |
| AGTTTGACAAGCATGCTTCA+AGG | + | chr4.4:29841548-29841567 | MS.gene56462:intron | 40.0% | |
| ATCAAGAAACCAGGAAATGC+CGG | - | chr4.4:29839594-29839613 | None:intergenic | 40.0% | |
| CAACTGACATACCCTCAATT+CGG | - | chr4.4:29843181-29843200 | None:intergenic | 40.0% | |
| CAATCATTCTTCCATTGTCG+GGG | + | chr4.4:29843105-29843124 | MS.gene56462:CDS | 40.0% | |
| CACATTCAATTCAGAAGAGG+TGG | - | chr4.4:29842831-29842850 | None:intergenic | 40.0% | |
| CACCTCTTCTGAATTGAATG+TGG | + | chr4.4:29842829-29842848 | MS.gene56462:CDS | 40.0% | |
| CAGGATGAAATTGGGAACTT+GGG | + | chr4.4:29842875-29842894 | MS.gene56462:CDS | 40.0% | |
| CGACAATGGAAGAATGATTG+AGG | - | chr4.4:29843105-29843124 | None:intergenic | 40.0% | |
| CGACTACTTTCAGATGATGT+TGG | + | chr4.4:29842770-29842789 | MS.gene56462:CDS | 40.0% | |
| CGAGAACATGATGATATGCA+GGG | - | chr4.4:29840457-29840476 | None:intergenic | 40.0% | |
| CTGAAAAAACCTCTGCTACT+AGG | + | chr4.4:29839546-29839565 | MS.gene56462:CDS | 40.0% | |
| CTTCTGAATTGAATGTGGAC+AGG | + | chr4.4:29842834-29842853 | MS.gene56462:CDS | 40.0% | |
| CTTGTTAGACATTCCTAACG+TGG | + | chr4.4:29840289-29840308 | MS.gene56462:intron | 40.0% | |
| GACATTGGAGAGAATAGAAG+AGG | + | chr4.4:29839920-29839939 | MS.gene56462:CDS | 40.0% | |
| GAGAAATTAAGTGGGAAACG+GGG | - | chr4.4:29840818-29840837 | None:intergenic | 40.0% | |
| GAGAACATGATGATATGCAG+GGG | - | chr4.4:29840456-29840475 | None:intergenic | 40.0% | |
| GATCTTGGGAACAACAATAG+GGG | + | chr4.4:29842941-29842960 | MS.gene56462:CDS | 40.0% | |
| GGTCACTCTGATTGTGATTA+TGG | + | chr4.4:29839788-29839807 | MS.gene56462:intron | 40.0% | |
| GGTTCAAGGTAGTCAAAATC+AGG | - | chr4.4:29842297-29842316 | None:intergenic | 40.0% | |
| GTCCACATTCAATTCAGAAG+AGG | - | chr4.4:29842834-29842853 | None:intergenic | 40.0% | |
| TAAAACCGGTCTGCTTTACA+AGG | + | chr4.4:29841599-29841618 | MS.gene56462:intron | 40.0% | |
| TACCTTCAAACCCACTTTGA+AGG | - | chr4.4:29841032-29841051 | None:intergenic | 40.0% | |
| TACTTGCAGTTGCAAAGTTC+AGG | - | chr4.4:29840490-29840509 | None:intergenic | 40.0% | |
| TAGAAGAGGCCGTTTCTTAA+AGG | + | chr4.4:29839934-29839953 | MS.gene56462:CDS | 40.0% | |
| TAGTTCCTTGTAAAGCAGAC+CGG | - | chr4.4:29841607-29841626 | None:intergenic | 40.0% | |
| TATTATGCGGGTTCAATCTC+TGG | + | chr4.4:29840152-29840171 | MS.gene56462:intron | 40.0% | |
| TCACTTTGTGGAAATCACCA+AGG | + | chr4.4:29843154-29843173 | MS.gene56462:CDS | 40.0% | |
| TCAGGATGAAATTGGGAACT+TGG | + | chr4.4:29842874-29842893 | MS.gene56462:CDS | 40.0% | |
| TCGAGAACATGATGATATGC+AGG | - | chr4.4:29840458-29840477 | None:intergenic | 40.0% | |
| TGAATTGAATGTGGACAGGT+CGG | + | chr4.4:29842838-29842857 | MS.gene56462:CDS | 40.0% | |
| TGATTCTACGATTATGGTCG+CGG | + | chr4.4:29841914-29841933 | MS.gene56462:intron | 40.0% | |
| TTCAAAGCAACTAGGCTTTG+TGG | + | chr4.4:29840059-29840078 | MS.gene56462:intron | 40.0% | |
| TTCTTCATTGCGGTAAAAGG+CGG | - | chr4.4:29840180-29840199 | None:intergenic | 40.0% | |
| TTTCTCTCCCATGAGGTATA+AGG | + | chr4.4:29840120-29840139 | MS.gene56462:intron | 40.0% | |
| TTTGCAATCAACTCCGGTAT+TGG | + | chr4.4:29841742-29841761 | MS.gene56462:intron | 40.0% | |
| ! | ACTCTAGCTTCTGCAAAATC+AGG | - | chr4.4:29839745-29839764 | None:intergenic | 40.0% |
| ! | CTCTAGCTTCTGCAAAATCA+GGG | - | chr4.4:29839744-29839763 | None:intergenic | 40.0% |
| ! | GGATCAAGAACTTTTCAGCA+AGG | + | chr4.4:29839640-29839659 | MS.gene56462:CDS | 40.0% |
| ! | GTTATTTCATTGCAGGTTGC+AGG | + | chr4.4:29843068-29843087 | MS.gene56462:intron | 40.0% |
| ! | TCAAAGCAACTAGGCTTTGT+GGG | + | chr4.4:29840060-29840079 | MS.gene56462:intron | 40.0% |
| ! | TGAGATTGTTGGTCACTTTG+TGG | + | chr4.4:29843142-29843161 | MS.gene56462:CDS | 40.0% |
| ! | TGTATACTCGTACTTGGTGA+GGG | - | chr4.4:29841846-29841865 | None:intergenic | 40.0% |
| ! | TTCAAAGTGGGTTTGAAGGT+AGG | + | chr4.4:29841031-29841050 | MS.gene56462:intron | 40.0% |
| ! | TTGATCAGCTCTGATCACTT+TGG | - | chr4.4:29842906-29842925 | None:intergenic | 40.0% |
| ! | TTGCATGTGCTGTTACACAA+GGG | + | chr4.4:29841147-29841166 | MS.gene56462:intron | 40.0% |
| ! | TTTGCATGTGCTGTTACACA+AGG | + | chr4.4:29841146-29841165 | MS.gene56462:intron | 40.0% |
| !! | ATGAAACCTGATTCGGAAGA+AGG | - | chr4.4:29842621-29842640 | None:intergenic | 40.0% |
| !! | CACAGAAAAGTGGACTATAC+AGG | - | chr4.4:29841891-29841910 | None:intergenic | 40.0% |
| !!! | AAAGTTTTGGTGCCTAAGCA+GGG | - | chr4.4:29842672-29842691 | None:intergenic | 40.0% |
| !!! | AGTTTTTTTTCCCCCTGCTT+AGG | + | chr4.4:29842657-29842676 | MS.gene56462:intron | 40.0% |
| !!! | GAGTAGACTTATTTTGGTGC+CGG | + | chr4.4:29840419-29840438 | MS.gene56462:intron | 40.0% |
| AATCACCAAGGACCGAATTG+AGG | + | chr4.4:29843166-29843185 | MS.gene56462:CDS | 45.0% | |
| ACACTCTCTTTCGCTCGAAT+TGG | + | chr4.4:29839969-29839988 | MS.gene56462:intron | 45.0% | |
| ACCATCATCGTTCCTTTCTC+CGG | + | chr4.4:29839572-29839591 | MS.gene56462:CDS | 45.0% | |
| ATCACCAAGGACCGAATTGA+GGG | + | chr4.4:29843167-29843186 | MS.gene56462:CDS | 45.0% | |
| ATCAGAAATTCCACCACGGA+AGG | - | chr4.4:29840558-29840577 | None:intergenic | 45.0% | |
| ATCATGTTGAAGTCCTTCCG+TGG | + | chr4.4:29840542-29840561 | MS.gene56462:intron | 45.0% | |
| ATCATTCCTGGTCATCATGG+TGG | + | chr4.4:29840362-29840381 | MS.gene56462:intron | 45.0% | |
| ATCTTAAGGTAACGACCACG+AGG | - | chr4.4:29839524-29839543 | None:intergenic | 45.0% | |
| ATTAAGTGGGAAACGGGGTT+TGG | - | chr4.4:29840813-29840832 | None:intergenic | 45.0% | |
| CAACAGAAAGCGGCCAATAA+TGG | - | chr4.4:29841124-29841143 | None:intergenic | 45.0% | |
| CACATCATTCCTGGTCATCA+TGG | + | chr4.4:29840359-29840378 | MS.gene56462:intron | 45.0% | |
| CAGAGATTAATGAAGCCTCG+AGG | + | chr4.4:29842590-29842609 | MS.gene56462:CDS | 45.0% | |
| CTTCAAGGCATGTATCACAC+TGG | + | chr4.4:29841563-29841582 | MS.gene56462:intron | 45.0% | |
| CTTTCAGATGATGTTGGTGC+TGG | + | chr4.4:29842776-29842795 | MS.gene56462:CDS | 45.0% | |
| GATCTGAAAGAGAATCCTCG+TGG | + | chr4.4:29839506-29839525 | MS.gene56462:CDS | 45.0% | |
| GCATTTCAAGCAACCACGTT+AGG | - | chr4.4:29840305-29840324 | None:intergenic | 45.0% | |
| GGAATTGCAGCTTGATACCA+AGG | + | chr4.4:29839661-29839680 | MS.gene56462:CDS | 45.0% | |
| GGATGAAATTGGGAACTTGG+GGG | + | chr4.4:29842877-29842896 | MS.gene56462:CDS | 45.0% | |
| GTGGGTTTGAAGGTAGGAAA+GGG | + | chr4.4:29841037-29841056 | MS.gene56462:intron | 45.0% | |
| GTGTTTCTTTCTCTCCCATG+AGG | + | chr4.4:29840113-29840132 | MS.gene56462:intron | 45.0% | |
| TAGCTTCTGCAAAATCAGGG+TGG | - | chr4.4:29839741-29839760 | None:intergenic | 45.0% | |
| TCATTCCTGGTCATCATGGT+GGG | + | chr4.4:29840363-29840382 | MS.gene56462:intron | 45.0% | |
| TCTTCATTGCGGTAAAAGGC+GGG | - | chr4.4:29840179-29840198 | None:intergenic | 45.0% | |
| TGCCAGCTCAGGATGAAATT+GGG | + | chr4.4:29842867-29842886 | MS.gene56462:CDS | 45.0% | |
| TGGGTTTGAAGGTAGGAAAG+GGG | + | chr4.4:29841038-29841057 | MS.gene56462:intron | 45.0% | |
| TTCAATTCAGAAGAGGTGGC+AGG | - | chr4.4:29842827-29842846 | None:intergenic | 45.0% | |
| TTCCCAATTTCATCCTGAGC+TGG | - | chr4.4:29842872-29842891 | None:intergenic | 45.0% | |
| TTGCCAGCTCAGGATGAAAT+TGG | + | chr4.4:29842866-29842885 | MS.gene56462:CDS | 45.0% | |
| TTTGAAGGTAGGAAAGGGGA+GGG | + | chr4.4:29841042-29841061 | MS.gene56462:intron | 45.0% | |
| TTTGAGGGGGATCAATTGTG+CGG | - | chr4.4:29843211-29843230 | None:intergenic | 45.0% | |
| ! | AGTGGGTTTGAAGGTAGGAA+AGG | + | chr4.4:29841036-29841055 | MS.gene56462:intron | 45.0% |
| ! | CAAAGCAACTAGGCTTTGTG+GGG | + | chr4.4:29840061-29840080 | MS.gene56462:intron | 45.0% |
| ! | GCTTTTCCTTCTTCCGAATC+AGG | + | chr4.4:29842612-29842631 | MS.gene56462:CDS | 45.0% |
| ! | GTGTATACTCGTACTTGGTG+AGG | - | chr4.4:29841847-29841866 | None:intergenic | 45.0% |
| !! | GGCTTTGTGGGGTTTTCAAT+TGG | + | chr4.4:29840072-29840091 | MS.gene56462:intron | 45.0% |
| !!! | AAGTTTTGGTGCCTAAGCAG+GGG | - | chr4.4:29842671-29842690 | None:intergenic | 45.0% |
| !!! | ATTTTGTGACGGGTGACACT+AGG | + | chr4.4:29841702-29841721 | MS.gene56462:intron | 45.0% |
| !!! | GAAAGTTTTGGTGCCTAAGC+AGG | - | chr4.4:29842673-29842692 | None:intergenic | 45.0% |
| !!! | TAGACTTATTTTGGTGCCGG+TGG | + | chr4.4:29840422-29840441 | MS.gene56462:intron | 45.0% |
| AACCAGGAAATGCCGGAGAA+AGG | - | chr4.4:29839587-29839606 | None:intergenic | 50.0% | |
| AAGTTCCAGGGATGAAGGGT+GGG | + | chr4.4:29842546-29842565 | MS.gene56462:CDS | 50.0% | |
| ACTCTACGTAGACTCGCGAA+GGG | + | chr4.4:29841252-29841271 | MS.gene56462:intron | 50.0% | |
| ATCTACCCACCATGATGACC+AGG | - | chr4.4:29840371-29840390 | None:intergenic | 50.0% | |
| ATCTGAAAGTAGTCGCTCCG+AGG | - | chr4.4:29842765-29842784 | None:intergenic | 50.0% | |
| ATGTTGAAGTCCTTCCGTGG+TGG | + | chr4.4:29840545-29840564 | MS.gene56462:intron | 50.0% | |
| CAGGAAGTTCCAGGGATGAA+GGG | + | chr4.4:29842542-29842561 | MS.gene56462:CDS | 50.0% | |
| CATACCCTCAATTCGGTCCT+TGG | - | chr4.4:29843174-29843193 | None:intergenic | 50.0% | |
| CGATGCTTGCCCTTCAAAGT+GGG | + | chr4.4:29841019-29841038 | MS.gene56462:intron | 50.0% | |
| CTTCATTGCGGTAAAAGGCG+GGG | - | chr4.4:29840178-29840197 | None:intergenic | 50.0% | |
| GATGGTAGACCTAGTAGCAG+AGG | - | chr4.4:29839558-29839577 | None:intergenic | 50.0% | |
| GGCAGCATTCAGGAACATTC+TGG | + | chr4.4:29842567-29842586 | MS.gene56462:CDS | 50.0% | |
| GTTTGAAGGTAGGAAAGGGG+AGG | + | chr4.4:29841041-29841060 | MS.gene56462:intron | 50.0% | |
| TCTGACTCCTAGATAGAGCC+TGG | + | chr4.4:29840839-29840858 | MS.gene56462:intron | 50.0% | |
| TGTTCCTGCAGGAAGTTCCA+GGG | + | chr4.4:29842534-29842553 | MS.gene56462:CDS | 50.0% | |
| TTCCTTTCTCCGGCATTTCC+TGG | + | chr4.4:29839582-29839601 | MS.gene56462:CDS | 50.0% | |
| TTCTACGATTATGGTCGCGG+TGG | + | chr4.4:29841917-29841936 | MS.gene56462:intron | 50.0% | |
| TTGAAGGTAGGAAAGGGGAG+GGG | + | chr4.4:29841043-29841062 | MS.gene56462:intron | 50.0% | |
| TTGTTCCTGCAGGAAGTTCC+AGG | + | chr4.4:29842533-29842552 | MS.gene56462:CDS | 50.0% | |
| ! | CCACTTTGAAGGGCAAGCAT+CGG | - | chr4.4:29841021-29841040 | None:intergenic | 50.0% |
| ! | GCCCTTCAAAGTGGGTTTGA+AGG | + | chr4.4:29841027-29841046 | MS.gene56462:intron | 50.0% |
| ! | TGTCTGAAGCTTCTGTCAGC+AGG | + | chr4.4:29842494-29842513 | MS.gene56462:CDS | 50.0% |
| !! | CACTTCACTTGGTGCGTGTT+TGG | + | chr4.4:29839695-29839714 | MS.gene56462:intron | 50.0% |
| !! | GGTGAAAGGCGTTGAAAACC+AGG | + | chr4.4:29841065-29841084 | MS.gene56462:intron | 50.0% |
| !! | GTTGGTGCTGGCTTCATATC+TGG | + | chr4.4:29842788-29842807 | MS.gene56462:CDS | 50.0% |
| !! | TTGAAGGGCAAGCATCGGAT+AGG | - | chr4.4:29841016-29841035 | None:intergenic | 50.0% |
| !!! | AGTTTTGGTGCCTAAGCAGG+GGG | - | chr4.4:29842670-29842689 | None:intergenic | 50.0% |
| AACTGCTTGAGCCCCGACAA+TGG | - | chr4.4:29843119-29843138 | None:intergenic | 55.0% | |
| AAGTGGGAAACGGGGTTTGG+AGG | - | chr4.4:29840810-29840829 | None:intergenic | 55.0% | |
| ATGAAGGGTGGGCAGCATTC+AGG | + | chr4.4:29842557-29842576 | MS.gene56462:CDS | 55.0% | |
| CCGATGCTTGCCCTTCAAAG+TGG | + | chr4.4:29841018-29841037 | MS.gene56462:intron | 55.0% | |
| CGGAAGAAGGAAAAGCCTCG+AGG | - | chr4.4:29842608-29842627 | None:intergenic | 55.0% | |
| GAAGTTCCAGGGATGAAGGG+TGG | + | chr4.4:29842545-29842564 | MS.gene56462:CDS | 55.0% | |
| GACTCTACGTAGACTCGCGA+AGG | + | chr4.4:29841251-29841270 | MS.gene56462:intron | 55.0% | |
| GCAGGAAGTTCCAGGGATGA+AGG | + | chr4.4:29842541-29842560 | MS.gene56462:CDS | 55.0% | |
| GCCGGAGAAAGGAACGATGA+TGG | - | chr4.4:29839576-29839595 | None:intergenic | 55.0% | |
| TACGATTATGGTCGCGGTGG+TGG | + | chr4.4:29841920-29841939 | MS.gene56462:intron | 55.0% | |
| TCATCCCTGGAACTTCCTGC+AGG | - | chr4.4:29842541-29842560 | None:intergenic | 55.0% | |
| TGAAGGTAGGAAAGGGGAGG+GGG | + | chr4.4:29841044-29841063 | MS.gene56462:intron | 55.0% | |
| TGCAGGGGTTTGATCTCCAC+CGG | - | chr4.4:29840441-29840460 | None:intergenic | 55.0% | |
| !! | CGCGGTGGTGGAACTACAAA+AGG | + | chr4.4:29841932-29841951 | MS.gene56462:intron | 55.0% |
| !! | GTCGGTTGATTTGCCAGCTC+AGG | + | chr4.4:29842856-29842875 | MS.gene56462:CDS | 55.0% |
| AGGAAAGGGGAGGGGGTGAA+AGG | + | chr4.4:29841051-29841070 | MS.gene56462:intron | 60.0% | |
| GAAACGGGGTTTGGAGGAGG+AGG | - | chr4.4:29840804-29840823 | None:intergenic | 60.0% | |
| TGGGAAACGGGGTTTGGAGG+AGG | - | chr4.4:29840807-29840826 | None:intergenic | 60.0% | |
| TTGGAGGAGGAGGAGGAGGA+AGG | - | chr4.4:29840794-29840813 | None:intergenic | 60.0% | |
| ACGGGGTTTGGAGGAGGAGG+AGG | - | chr4.4:29840801-29840820 | None:intergenic | 65.0% | |
| GGGTTTGGAGGAGGAGGAGG+AGG | - | chr4.4:29840798-29840817 | None:intergenic | 65.0% | |
| TGCTGCCCACCCTTCATCCC+TGG | - | chr4.4:29842554-29842573 | None:intergenic | 65.0% | |
| !! | AGGTGGTGGTGGTGCTGACG+TGG | + | chr4.4:29839436-29839455 | MS.gene56462:CDS | 65.0% |
| ATGGAGGGAAGCTCCGGGGG+TGG | + | chr4.4:29839383-29839402 | MS.gene56462:CDS | 70.0% | |
| GGTAGCAGCGGTGGAGGTGG+TGG | + | chr4.4:29839422-29839441 | MS.gene56462:CDS | 70.0% | |
| GGTGGTAGCAGCGGTGGAGG+TGG | + | chr4.4:29839419-29839438 | MS.gene56462:CDS | 70.0% | |
| ! | AGCAGCGGTGGAGGTGGTGG+TGG | + | chr4.4:29839425-29839444 | MS.gene56462:CDS | 70.0% |
| ! | GGTGGTGGTAGCAGCGGTGG+AGG | + | chr4.4:29839416-29839435 | MS.gene56462:CDS | 70.0% |
| GAGGGAAGCTCCGGGGGTGG+TGG | + | chr4.4:29839386-29839405 | MS.gene56462:CDS | 75.0% | |
| ! | GGAAGCTCCGGGGGTGGTGG+TGG | + | chr4.4:29839389-29839408 | MS.gene56462:CDS | 75.0% |
| ! | GGCGGCGGTGGTGGTAGCAG+CGG | + | chr4.4:29839410-29839429 | MS.gene56462:CDS | 75.0% |
| ! | GGCGGTGGTGGTAGCAGCGG+TGG | + | chr4.4:29839413-29839432 | MS.gene56462:CDS | 75.0% |
| !! | AGCTCCGGGGGTGGTGGTGG+CGG | + | chr4.4:29839392-29839411 | MS.gene56462:CDS | 75.0% |
| ! | ACCGCCGCCACCACCACCCC+CGG | - | chr4.4:29839399-29839418 | None:intergenic | 80.0% |
| !!! | GGTGGTGGTGGCGGCGGTGG+TGG | + | chr4.4:29839401-29839420 | MS.gene56462:CDS | 80.0% |
| !!! | TCCGGGGGTGGTGGTGGCGG+CGG | + | chr4.4:29839395-29839414 | MS.gene56462:CDS | 80.0% |
| !!! | GGGGGTGGTGGTGGCGGCGG+TGG | + | chr4.4:29839398-29839417 | MS.gene56462:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 29839383 | 29843235 | 29839383 | ID=MS.gene56462 |
| chr4.4 | mRNA | 29839383 | 29843235 | 29839383 | ID=MS.gene56462.t1;Parent=MS.gene56462 |
| chr4.4 | exon | 29839383 | 29839682 | 29839383 | ID=MS.gene56462.t1.exon1;Parent=MS.gene56462.t1 |
| chr4.4 | CDS | 29839383 | 29839682 | 29839383 | ID=cds.MS.gene56462.t1;Parent=MS.gene56462.t1 |
| chr4.4 | exon | 29839908 | 29839955 | 29839908 | ID=MS.gene56462.t1.exon2;Parent=MS.gene56462.t1 |
| chr4.4 | CDS | 29839908 | 29839955 | 29839908 | ID=cds.MS.gene56462.t1;Parent=MS.gene56462.t1 |
| chr4.4 | exon | 29842493 | 29842633 | 29842493 | ID=MS.gene56462.t1.exon3;Parent=MS.gene56462.t1 |
| chr4.4 | CDS | 29842493 | 29842633 | 29842493 | ID=cds.MS.gene56462.t1;Parent=MS.gene56462.t1 |
| chr4.4 | exon | 29842749 | 29842985 | 29842749 | ID=MS.gene56462.t1.exon4;Parent=MS.gene56462.t1 |
| chr4.4 | CDS | 29842749 | 29842985 | 29842749 | ID=cds.MS.gene56462.t1;Parent=MS.gene56462.t1 |
| chr4.4 | exon | 29843083 | 29843235 | 29843083 | ID=MS.gene56462.t1.exon5;Parent=MS.gene56462.t1 |
| chr4.4 | CDS | 29843083 | 29843235 | 29843083 | ID=cds.MS.gene56462.t1;Parent=MS.gene56462.t1 |
| Gene Sequence |
| Protein sequence |
