Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90880.t1 | XP_013470504.1 | 99.3 | 422 | 3 | 0 | 40 | 461 | 1476 | 1897 | 1.40E-231 | 812 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90880.t1 | Q9SFU6 | 81.0 | 422 | 80 | 0 | 40 | 461 | 1469 | 1890 | 1.0e-198 | 694.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90880.t1 | A0A072VRY1 | 99.3 | 422 | 3 | 0 | 40 | 461 | 1476 | 1897 | 1.0e-231 | 812.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene90880 | 0.856684 | 2.72E-62 | -1.69E-46 |
| MS.gene04918 | MS.gene90880 | 0.837811 | 4.17E-57 | -1.69E-46 |
| MS.gene04920 | MS.gene90880 | 0.802735 | 4.87E-49 | -1.69E-46 |
| MS.gene049254 | MS.gene90880 | 0.814152 | 1.78E-51 | -1.69E-46 |
| MS.gene049350 | MS.gene90880 | 0.853722 | 1.98E-61 | -1.69E-46 |
| MS.gene049368 | MS.gene90880 | 0.846101 | 2.68E-59 | -1.69E-46 |
| MS.gene049411 | MS.gene90880 | 0.834789 | 2.45E-56 | -1.69E-46 |
| MS.gene049672 | MS.gene90880 | 0.810275 | 1.25E-50 | -1.69E-46 |
| MS.gene049711 | MS.gene90880 | 0.846105 | 2.68E-59 | -1.69E-46 |
| MS.gene049807 | MS.gene90880 | 0.88631 | 3.82E-72 | -1.69E-46 |
| MS.gene049824 | MS.gene90880 | 0.808939 | 2.42E-50 | -1.69E-46 |
| MS.gene049825 | MS.gene90880 | 0.80234 | 5.88E-49 | -1.69E-46 |
| MS.gene049850 | MS.gene90880 | 0.822798 | 1.95E-53 | -1.69E-46 |
| MS.gene049887 | MS.gene90880 | 0.809452 | 1.88E-50 | -1.69E-46 |
| MS.gene049983 | MS.gene90880 | 0.817811 | 2.72E-52 | -1.69E-46 |
| MS.gene050258 | MS.gene90880 | 0.818608 | 1.79E-52 | -1.69E-46 |
| MS.gene050414 | MS.gene90880 | 0.820899 | 5.37E-53 | -1.69E-46 |
| MS.gene05045 | MS.gene90880 | 0.800704 | 1.27E-48 | -1.69E-46 |
| MS.gene050551 | MS.gene90880 | 0.807656 | 4.54E-50 | -1.69E-46 |
| MS.gene050559 | MS.gene90880 | 0.814527 | 1.47E-51 | -1.69E-46 |
| MS.gene050561 | MS.gene90880 | 0.806142 | 9.50E-50 | -1.69E-46 |
| MS.gene050646 | MS.gene90880 | 0.801455 | 8.93E-49 | -1.69E-46 |
| MS.gene050689 | MS.gene90880 | 0.856874 | 2.39E-62 | -1.69E-46 |
| MS.gene050752 | MS.gene90880 | 0.804293 | 2.32E-49 | -1.69E-46 |
| MS.gene050838 | MS.gene90880 | 0.841271 | 5.26E-58 | -1.69E-46 |
| MS.gene050901 | MS.gene90880 | 0.829558 | 4.81E-55 | -1.69E-46 |
| MS.gene050945 | MS.gene90880 | 0.813127 | 3.00E-51 | -1.69E-46 |
| MS.gene050955 | MS.gene90880 | 0.807584 | 4.71E-50 | -1.69E-46 |
| MS.gene051003 | MS.gene90880 | 0.850303 | 1.85E-60 | -1.69E-46 |
| MS.gene051029 | MS.gene90880 | 0.810334 | 1.21E-50 | -1.69E-46 |
| MS.gene051201 | MS.gene90880 | 0.810378 | 1.19E-50 | -1.69E-46 |
| MS.gene051234 | MS.gene90880 | 0.885319 | 9.01E-72 | -1.69E-46 |
| MS.gene051279 | MS.gene90880 | 0.802813 | 4.69E-49 | -1.69E-46 |
| MS.gene051343 | MS.gene90880 | 0.827865 | 1.24E-54 | -1.69E-46 |
| MS.gene051450 | MS.gene90880 | 0.813201 | 2.89E-51 | -1.69E-46 |
| MS.gene051701 | MS.gene90880 | 0.80805 | 3.75E-50 | -1.69E-46 |
| MS.gene051719 | MS.gene90880 | 0.837727 | 4.38E-57 | -1.69E-46 |
| MS.gene051720 | MS.gene90880 | 0.843508 | 1.34E-58 | -1.69E-46 |
| MS.gene051744 | MS.gene90880 | 0.83416 | 3.52E-56 | -1.69E-46 |
| MS.gene051902 | MS.gene90880 | 0.81073 | 9.97E-51 | -1.69E-46 |
| MS.gene052016 | MS.gene90880 | 0.807248 | 5.55E-50 | -1.69E-46 |
| MS.gene052072 | MS.gene90880 | 0.82854 | 8.49E-55 | -1.69E-46 |
| MS.gene052155 | MS.gene90880 | -0.810005 | 1.43E-50 | -1.69E-46 |
| MS.gene052307 | MS.gene90880 | 0.874131 | 8.58E-68 | -1.69E-46 |
| MS.gene052335 | MS.gene90880 | 0.849269 | 3.60E-60 | -1.69E-46 |
| MS.gene052463 | MS.gene90880 | 0.846584 | 1.98E-59 | -1.69E-46 |
| MS.gene052516 | MS.gene90880 | 0.863236 | 2.87E-64 | -1.69E-46 |
| MS.gene052518 | MS.gene90880 | 0.813115 | 3.01E-51 | -1.69E-46 |
| MS.gene052519 | MS.gene90880 | 0.824272 | 8.83E-54 | -1.69E-46 |
| MS.gene052533 | MS.gene90880 | 0.839312 | 1.71E-57 | -1.69E-46 |
| MS.gene052609 | MS.gene90880 | 0.851117 | 1.09E-60 | -1.69E-46 |
| MS.gene052773 | MS.gene90880 | 0.816662 | 4.93E-52 | -1.69E-46 |
| MS.gene053079 | MS.gene90880 | 0.846256 | 2.44E-59 | -1.69E-46 |
| MS.gene053122 | MS.gene90880 | 0.860607 | 1.84E-63 | -1.69E-46 |
| MS.gene053143 | MS.gene90880 | 0.852612 | 4.12E-61 | -1.69E-46 |
| MS.gene053144 | MS.gene90880 | 0.86201 | 6.86E-64 | -1.69E-46 |
| MS.gene053171 | MS.gene90880 | 0.814444 | 1.54E-51 | -1.69E-46 |
| MS.gene053226 | MS.gene90880 | 0.83985 | 1.24E-57 | -1.69E-46 |
| MS.gene053272 | MS.gene90880 | -0.824472 | 7.92E-54 | -1.69E-46 |
| MS.gene053536 | MS.gene90880 | 0.834516 | 2.86E-56 | -1.69E-46 |
| MS.gene053538 | MS.gene90880 | 0.83812 | 3.47E-57 | -1.69E-46 |
| MS.gene053581 | MS.gene90880 | 0.841046 | 6.02E-58 | -1.69E-46 |
| MS.gene053599 | MS.gene90880 | 0.814341 | 1.62E-51 | -1.69E-46 |
| MS.gene05364 | MS.gene90880 | 0.844153 | 9.02E-59 | -1.69E-46 |
| MS.gene053678 | MS.gene90880 | 0.804342 | 2.26E-49 | -1.69E-46 |
| MS.gene054004 | MS.gene90880 | 0.833653 | 4.71E-56 | -1.69E-46 |
| MS.gene054142 | MS.gene90880 | 0.864661 | 1.04E-64 | -1.69E-46 |
| MS.gene054178 | MS.gene90880 | 0.835471 | 1.65E-56 | -1.69E-46 |
| MS.gene054403 | MS.gene90880 | 0.806505 | 7.96E-50 | -1.69E-46 |
| MS.gene054584 | MS.gene90880 | 0.846034 | 2.80E-59 | -1.69E-46 |
| MS.gene05458 | MS.gene90880 | 0.826443 | 2.71E-54 | -1.69E-46 |
| MS.gene054651 | MS.gene90880 | 0.847711 | 9.73E-60 | -1.69E-46 |
| MS.gene054709 | MS.gene90880 | 0.841118 | 5.77E-58 | -1.69E-46 |
| MS.gene055144 | MS.gene90880 | 0.800148 | 1.65E-48 | -1.69E-46 |
| MS.gene055221 | MS.gene90880 | 0.811138 | 8.13E-51 | -1.69E-46 |
| MS.gene055465 | MS.gene90880 | 0.826672 | 2.39E-54 | -1.69E-46 |
| MS.gene055466 | MS.gene90880 | 0.825464 | 4.62E-54 | -1.69E-46 |
| MS.gene055468 | MS.gene90880 | 0.838526 | 2.73E-57 | -1.69E-46 |
| MS.gene055512 | MS.gene90880 | 0.808726 | 2.69E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene90880 | 0.888025 | 8.51E-73 | -1.69E-46 |
| MS.gene055537 | MS.gene90880 | 0.821078 | 4.89E-53 | -1.69E-46 |
| MS.gene055555 | MS.gene90880 | 0.80009 | 1.70E-48 | -1.69E-46 |
| MS.gene055580 | MS.gene90880 | -0.850642 | 1.49E-60 | -1.69E-46 |
| MS.gene055891 | MS.gene90880 | 0.800559 | 1.36E-48 | -1.69E-46 |
| MS.gene056005 | MS.gene90880 | 0.818376 | 2.02E-52 | -1.69E-46 |
| MS.gene056043 | MS.gene90880 | -0.837574 | 4.80E-57 | -1.69E-46 |
| MS.gene056082 | MS.gene90880 | 0.820828 | 5.58E-53 | -1.69E-46 |
| MS.gene056181 | MS.gene90880 | 0.806545 | 7.81E-50 | -1.69E-46 |
| MS.gene056308 | MS.gene90880 | 0.870882 | 1.04E-66 | -1.69E-46 |
| MS.gene056507 | MS.gene90880 | 0.812857 | 3.43E-51 | -1.69E-46 |
| MS.gene056578 | MS.gene90880 | 0.818349 | 2.05E-52 | -1.69E-46 |
| MS.gene056595 | MS.gene90880 | 0.804809 | 1.81E-49 | -1.69E-46 |
| MS.gene056677 | MS.gene90880 | 0.808847 | 2.53E-50 | -1.69E-46 |
| MS.gene056699 | MS.gene90880 | 0.846905 | 1.62E-59 | -1.69E-46 |
| MS.gene05686 | MS.gene90880 | 0.830841 | 2.34E-55 | -1.69E-46 |
| MS.gene057034 | MS.gene90880 | 0.82107 | 4.91E-53 | -1.69E-46 |
| MS.gene057082 | MS.gene90880 | 0.815423 | 9.31E-52 | -1.69E-46 |
| MS.gene057102 | MS.gene90880 | 0.890504 | 9.28E-74 | -1.69E-46 |
| MS.gene057132 | MS.gene90880 | 0.825245 | 5.21E-54 | -1.69E-46 |
| MS.gene057208 | MS.gene90880 | 0.808383 | 3.18E-50 | -1.69E-46 |
| MS.gene057294 | MS.gene90880 | 0.832637 | 8.44E-56 | -1.69E-46 |
| MS.gene057694 | MS.gene90880 | 0.812932 | 3.31E-51 | -1.69E-46 |
| MS.gene057705 | MS.gene90880 | 0.812878 | 3.40E-51 | -1.69E-46 |
| MS.gene058008 | MS.gene90880 | 0.838954 | 2.11E-57 | -1.69E-46 |
| MS.gene058009 | MS.gene90880 | 0.834491 | 2.91E-56 | -1.69E-46 |
| MS.gene058149 | MS.gene90880 | 0.850763 | 1.38E-60 | -1.69E-46 |
| MS.gene058330 | MS.gene90880 | 0.813616 | 2.34E-51 | -1.69E-46 |
| MS.gene058339 | MS.gene90880 | 0.810398 | 1.18E-50 | -1.69E-46 |
| MS.gene058492 | MS.gene90880 | 0.841756 | 3.92E-58 | -1.69E-46 |
| MS.gene058625 | MS.gene90880 | 0.834712 | 2.56E-56 | -1.69E-46 |
| MS.gene058649 | MS.gene90880 | 0.812435 | 4.25E-51 | -1.69E-46 |
| MS.gene058668 | MS.gene90880 | 0.809268 | 2.06E-50 | -1.69E-46 |
| MS.gene058781 | MS.gene90880 | 0.824176 | 9.30E-54 | -1.69E-46 |
| MS.gene058783 | MS.gene90880 | 0.828111 | 1.08E-54 | -1.69E-46 |
| MS.gene058852 | MS.gene90880 | 0.810839 | 9.44E-51 | -1.69E-46 |
| MS.gene05894 | MS.gene90880 | 0.833708 | 4.57E-56 | -1.69E-46 |
| MS.gene059146 | MS.gene90880 | 0.831759 | 1.39E-55 | -1.69E-46 |
| MS.gene059170 | MS.gene90880 | 0.806194 | 9.26E-50 | -1.69E-46 |
| MS.gene059227 | MS.gene90880 | 0.819448 | 1.16E-52 | -1.69E-46 |
| MS.gene059424 | MS.gene90880 | 0.822607 | 2.16E-53 | -1.69E-46 |
| MS.gene059570 | MS.gene90880 | 0.808551 | 2.93E-50 | -1.69E-46 |
| MS.gene059625 | MS.gene90880 | 0.814094 | 1.84E-51 | -1.69E-46 |
| MS.gene059778 | MS.gene90880 | 0.880501 | 5.21E-70 | -1.69E-46 |
| MS.gene05978 | MS.gene90880 | 0.807532 | 4.83E-50 | -1.69E-46 |
| MS.gene05985 | MS.gene90880 | -0.853758 | 1.93E-61 | -1.69E-46 |
| MS.gene059965 | MS.gene90880 | 0.818837 | 1.59E-52 | -1.69E-46 |
| MS.gene060519 | MS.gene90880 | 0.814461 | 1.52E-51 | -1.69E-46 |
| MS.gene060587 | MS.gene90880 | 0.829071 | 6.32E-55 | -1.69E-46 |
| MS.gene060603 | MS.gene90880 | 0.809319 | 2.01E-50 | -1.69E-46 |
| MS.gene060935 | MS.gene90880 | 0.857883 | 1.20E-62 | -1.69E-46 |
| MS.gene060937 | MS.gene90880 | 0.856879 | 2.39E-62 | -1.69E-46 |
| MS.gene061100 | MS.gene90880 | 0.887587 | 1.25E-72 | -1.69E-46 |
| MS.gene061160 | MS.gene90880 | 0.834159 | 3.52E-56 | -1.69E-46 |
| MS.gene061188 | MS.gene90880 | 0.822976 | 1.78E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90880.t1 | MTR_1g116470 | 99.289 | 422 | 3 | 0 | 40 | 461 | 1476 | 1897 | 0.0 | 848 |
| MS.gene90880.t1 | MTR_1g116470 | 99.289 | 422 | 3 | 0 | 40 | 461 | 1481 | 1902 | 0.0 | 848 |
| MS.gene90880.t1 | MTR_3g075180 | 69.928 | 419 | 126 | 0 | 40 | 458 | 1487 | 1905 | 0.0 | 634 |
| MS.gene90880.t1 | MTR_3g075180 | 68.286 | 350 | 111 | 0 | 40 | 389 | 1489 | 1838 | 7.76e-168 | 517 |
| MS.gene90880.t1 | MTR_7g005950 | 55.476 | 420 | 183 | 3 | 40 | 455 | 1529 | 1948 | 4.63e-151 | 473 |
| MS.gene90880.t1 | MTR_2g061380 | 53.555 | 422 | 193 | 2 | 40 | 458 | 1519 | 1940 | 1.89e-150 | 471 |
| MS.gene90880.t1 | MTR_3g096200 | 54.327 | 416 | 187 | 2 | 42 | 454 | 1509 | 1924 | 1.31e-147 | 463 |
| MS.gene90880.t1 | MTR_8g093630 | 52.857 | 420 | 195 | 2 | 42 | 458 | 1519 | 1938 | 3.75e-146 | 459 |
| MS.gene90880.t1 | MTR_1g116370 | 55.370 | 419 | 184 | 2 | 40 | 455 | 1513 | 1931 | 1.20e-139 | 441 |
| MS.gene90880.t1 | MTR_3g047390 | 51.202 | 416 | 200 | 2 | 42 | 454 | 1485 | 1900 | 1.54e-130 | 416 |
| MS.gene90880.t1 | MTR_2g013580 | 49.761 | 418 | 205 | 3 | 42 | 456 | 1358 | 1773 | 1.13e-129 | 412 |
| MS.gene90880.t1 | MTR_2g072160 | 46.988 | 415 | 216 | 3 | 42 | 453 | 1529 | 1942 | 1.04e-128 | 410 |
| MS.gene90880.t1 | MTR_4g078220 | 48.687 | 419 | 210 | 3 | 39 | 454 | 1342 | 1758 | 1.64e-125 | 401 |
| MS.gene90880.t1 | MTR_7g005950 | 54.441 | 349 | 155 | 3 | 40 | 384 | 1529 | 1877 | 2.26e-118 | 381 |
| MS.gene90880.t1 | MTR_2g090375 | 44.153 | 419 | 187 | 4 | 39 | 454 | 1332 | 1706 | 2.29e-109 | 355 |
| MS.gene90880.t1 | MTR_1g101740 | 40.876 | 411 | 216 | 7 | 57 | 459 | 1 | 392 | 1.30e-94 | 291 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90880.t1 | AT3G07160 | 81.043 | 422 | 80 | 0 | 40 | 461 | 1471 | 1892 | 0.0 | 694 |
| MS.gene90880.t1 | AT3G07160 | 81.043 | 422 | 80 | 0 | 40 | 461 | 1471 | 1892 | 0.0 | 694 |
| MS.gene90880.t1 | AT3G07160 | 81.043 | 422 | 80 | 0 | 40 | 461 | 1469 | 1890 | 0.0 | 694 |
| MS.gene90880.t1 | AT2G36850 | 68.735 | 419 | 131 | 0 | 40 | 458 | 1483 | 1901 | 0.0 | 603 |
| MS.gene90880.t1 | AT2G31960 | 54.610 | 423 | 188 | 3 | 40 | 458 | 1480 | 1902 | 3.74e-151 | 473 |
| MS.gene90880.t1 | AT2G31960 | 54.610 | 423 | 188 | 3 | 40 | 458 | 1521 | 1943 | 5.13e-151 | 473 |
| MS.gene90880.t1 | AT2G31960 | 54.610 | 423 | 188 | 3 | 40 | 458 | 1521 | 1943 | 5.13e-151 | 473 |
| MS.gene90880.t1 | AT2G31960 | 54.610 | 423 | 188 | 3 | 40 | 458 | 1521 | 1943 | 5.13e-151 | 473 |
| MS.gene90880.t1 | AT2G31960 | 54.610 | 423 | 188 | 3 | 40 | 458 | 1521 | 1943 | 5.13e-151 | 473 |
| MS.gene90880.t1 | AT1G05570 | 54.137 | 423 | 190 | 3 | 40 | 458 | 1480 | 1902 | 1.19e-149 | 468 |
| MS.gene90880.t1 | AT1G05570 | 54.137 | 423 | 190 | 3 | 40 | 458 | 1521 | 1943 | 1.56e-149 | 469 |
| MS.gene90880.t1 | AT1G05570 | 54.137 | 423 | 190 | 3 | 40 | 458 | 1521 | 1943 | 1.56e-149 | 469 |
| MS.gene90880.t1 | AT1G05570 | 54.137 | 423 | 190 | 3 | 40 | 458 | 1521 | 1943 | 1.56e-149 | 469 |
| MS.gene90880.t1 | AT1G06490 | 53.828 | 418 | 190 | 2 | 42 | 456 | 1508 | 1925 | 1.01e-144 | 455 |
| MS.gene90880.t1 | AT1G06490 | 53.828 | 418 | 190 | 2 | 42 | 456 | 1508 | 1925 | 1.08e-144 | 455 |
| MS.gene90880.t1 | AT5G13000 | 53.791 | 422 | 192 | 2 | 40 | 458 | 1527 | 1948 | 2.02e-138 | 438 |
| MS.gene90880.t1 | AT3G59100 | 53.365 | 416 | 191 | 2 | 42 | 454 | 1199 | 1614 | 1.19e-136 | 430 |
| MS.gene90880.t1 | AT3G59100 | 53.365 | 416 | 191 | 2 | 42 | 454 | 1496 | 1911 | 6.09e-136 | 431 |
| MS.gene90880.t1 | AT4G03550 | 50.820 | 427 | 205 | 4 | 39 | 461 | 1355 | 1780 | 2.13e-132 | 420 |
| MS.gene90880.t1 | AT4G04970 | 50.594 | 421 | 203 | 3 | 39 | 456 | 1348 | 1766 | 1.00e-131 | 418 |
| MS.gene90880.t1 | AT2G13680 | 52.123 | 424 | 189 | 5 | 42 | 454 | 1498 | 1918 | 7.38e-131 | 416 |
| MS.gene90880.t1 | AT3G14570 | 47.381 | 420 | 218 | 2 | 42 | 458 | 1540 | 1959 | 3.54e-128 | 409 |
| MS.gene90880.t1 | AT3G14570 | 47.381 | 420 | 218 | 2 | 42 | 458 | 1530 | 1949 | 4.96e-128 | 409 |
| MS.gene90880.t1 | AT3G14570 | 47.381 | 420 | 218 | 2 | 42 | 458 | 1556 | 1975 | 5.56e-128 | 409 |
| MS.gene90880.t1 | AT5G13000 | 52.494 | 421 | 178 | 2 | 40 | 458 | 1507 | 1907 | 2.15e-127 | 407 |
| MS.gene90880.t1 | AT5G36870 | 48.931 | 421 | 196 | 9 | 42 | 455 | 1452 | 1860 | 5.21e-122 | 391 |
| MS.gene90880.t1 | AT5G36870 | 48.931 | 421 | 196 | 9 | 42 | 455 | 1445 | 1853 | 5.28e-122 | 391 |
| MS.gene90880.t1 | AT5G36870 | 48.931 | 421 | 196 | 9 | 42 | 455 | 1445 | 1853 | 5.28e-122 | 391 |
| MS.gene90880.t1 | AT5G36870 | 48.931 | 421 | 196 | 9 | 42 | 455 | 1453 | 1861 | 5.44e-122 | 391 |
| MS.gene90880.t1 | AT5G36870 | 52.137 | 234 | 99 | 4 | 42 | 273 | 1445 | 1667 | 2.13e-70 | 243 |
Find 114 sgRNAs with CRISPR-Local
Find 496 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAGTTTATGCCTTTCTTTA+TGG | 0.125838 | 1.1:+82039530 | MS.gene90880:CDS |
| GGTACAAGAACCCATTATTT+TGG | 0.164802 | 1.1:+82040235 | MS.gene90880:CDS |
| AAGCTTAAGCAGTTGGTTTA+TGG | 0.170933 | 1.1:+82041787 | MS.gene90880:CDS |
| ATCATATTGGTCTTGGTTAA+AGG | 0.174892 | 1.1:+82038490 | MS.gene90880:CDS |
| TCCTGACGGGTTGAATAAAT+AGG | 0.262114 | 1.1:-82041831 | None:intergenic |
| CACTGCTGTGCCAATGGTCT+TGG | 0.262234 | 1.1:+82039895 | MS.gene90880:CDS |
| GAATTGTTCGTCCAAAATAA+TGG | 0.263596 | 1.1:-82040246 | None:intergenic |
| ACACAGTTTCTCTTCCAAAT+TGG | 0.286071 | 1.1:+82039866 | MS.gene90880:CDS |
| TTGATAGTATATCTTGCTTA+TGG | 0.305540 | 1.1:+82041728 | MS.gene90880:CDS |
| GCTTATACACAATGCCATAT+TGG | 0.309797 | 1.1:-82042572 | None:intergenic |
| GAAATTTCTTTAATCCTTGC+TGG | 0.312438 | 1.1:+82045261 | MS.gene90880:CDS |
| GTGTATAAGCTTAACATAAA+AGG | 0.315030 | 1.1:+82042585 | MS.gene90880:CDS |
| TTCATCTGCAGGCTCATATC+AGG | 0.315514 | 1.1:+82042496 | MS.gene90880:intron |
| GGTTAAACATCAGGCGAGTT+TGG | 0.321169 | 1.1:-82045218 | None:intergenic |
| TAGAGGTGGAATTGGTGTTA+AGG | 0.328451 | 1.1:+82042214 | MS.gene90880:CDS |
| AGCACTCAGAGCAGTATTCT+TGG | 0.333676 | 1.1:-82039834 | None:intergenic |
| GGCTTTGATCATATTGGTCT+TGG | 0.334855 | 1.1:+82038483 | MS.gene90880:CDS |
| GCTGGGAACAATCCCAATAC+TGG | 0.336124 | 1.1:+82045279 | MS.gene90880:CDS |
| AGAGGTGGAATTGGTGTTAA+GGG | 0.346628 | 1.1:+82042215 | MS.gene90880:CDS |
| AATTGTTCGTCCAAAATAAT+GGG | 0.354846 | 1.1:-82040245 | None:intergenic |
| CTACTTTATAGAGGTGGAAT+TGG | 0.355919 | 1.1:+82042206 | MS.gene90880:CDS |
| TGATGAAAAGGCTAGGACTA+TGG | 0.357756 | 1.1:+82045094 | MS.gene90880:CDS |
| TCATATTGGTCTTGGTTAAA+GGG | 0.369869 | 1.1:+82038491 | MS.gene90880:CDS |
| CAGCAGTGAATATACCAATT+TGG | 0.371605 | 1.1:-82039880 | None:intergenic |
| TTTGTTGGCGCTGGCTGGTT+TGG | 0.373376 | 1.1:+82043919 | MS.gene90880:CDS |
| AGGTTTGGCTTTGATCATAT+TGG | 0.380622 | 1.1:+82038477 | MS.gene90880:CDS |
| ATATCAGGAGCTTGGGTTCA+AGG | 0.381132 | 1.1:+82042511 | MS.gene90880:CDS |
| GTTTGGAATGTTGATACAAA+TGG | 0.381192 | 1.1:-82045201 | None:intergenic |
| GGAAATTGACTGATATCTTC+TGG | 0.384889 | 1.1:-82043862 | None:intergenic |
| TTTGGACGAACAATTCTTCA+TGG | 0.387656 | 1.1:+82040253 | MS.gene90880:CDS |
| ACTTCCGAGACTGGACAAAT+TGG | 0.393404 | 1.1:+82042183 | MS.gene90880:CDS |
| AACCAGCCAGCGCCAACAAA+AGG | 0.394942 | 1.1:-82043916 | None:intergenic |
| CACAACTATATCCCAGTATT+GGG | 0.396897 | 1.1:-82045291 | None:intergenic |
| ACTGCTGTGCCAATGGTCTT+GGG | 0.398496 | 1.1:+82039896 | MS.gene90880:CDS |
| CCCTATTTATTCAACCCGTC+AGG | 0.402871 | 1.1:+82041830 | MS.gene90880:CDS |
| TACAGGTTTATGGATTATCA+TGG | 0.408300 | 1.1:+82043707 | MS.gene90880:intron |
| TACTAGGCACTTTCTGGTGT+TGG | 0.412931 | 1.1:+82039782 | MS.gene90880:intron |
| ACCTATCAACAACCTCAGTT+TGG | 0.440537 | 1.1:-82038827 | None:intergenic |
| GTTGGTTTATGGCTCTATCC+TGG | 0.445711 | 1.1:+82041798 | MS.gene90880:CDS |
| GCACAACTATATCCCAGTAT+TGG | 0.446389 | 1.1:-82045292 | None:intergenic |
| CAGGCTCATATCAGGAGCTT+GGG | 0.449752 | 1.1:+82042504 | MS.gene90880:intron |
| TAGTGGTAGACTTCCGAGAC+TGG | 0.451118 | 1.1:+82042174 | MS.gene90880:CDS |
| TTCTTCTAAGCTTAAGCAGT+TGG | 0.454247 | 1.1:+82041780 | MS.gene90880:CDS |
| CTTGTGTTGCGGTTTGTACA+AGG | 0.457250 | 1.1:+82043887 | MS.gene90880:CDS |
| TGGATTATCATGGGTCGTAT+TGG | 0.458837 | 1.1:+82043717 | MS.gene90880:CDS |
| CATACCATGGGTGAAGAGAT+AGG | 0.463414 | 1.1:+82038457 | None:intergenic |
| AAAGGGGTCCTTGATGTGCT+TGG | 0.463724 | 1.1:+82038508 | MS.gene90880:CDS |
| TCTTGTCTTCAGGTTGGAAG+TGG | 0.465041 | 1.1:+82041697 | MS.gene90880:intron |
| GTGTTAAGGGAGAAGAAAGC+TGG | 0.469687 | 1.1:+82042228 | MS.gene90880:CDS |
| CTAACCCTCGGCTAAATGCC+TGG | 0.472149 | 1.1:-82045239 | None:intergenic |
| CCTGACGGGTTGAATAAATA+GGG | 0.472306 | 1.1:-82041830 | None:intergenic |
| ACAAATTGGCTACTTTATAG+AGG | 0.473692 | 1.1:+82042197 | MS.gene90880:CDS |
| AGCTTGGTGGGAAGAAGAAC+TGG | 0.474218 | 1.1:+82042253 | MS.gene90880:CDS |
| CAGTATCAAGCGACAGGCCG+AGG | 0.474488 | 1.1:+82040355 | MS.gene90880:intron |
| TAAATGCCTGGTTAAACATC+AGG | 0.475584 | 1.1:-82045227 | None:intergenic |
| CATGGGTGAAGAGATAGGTT+TGG | 0.476027 | 1.1:+82038462 | None:intergenic |
| AAATACCACCCTAAAACAAA+TGG | 0.478169 | 1.1:+82038804 | MS.gene90880:CDS |
| TAGCATTCATTCCTACTGGA+TGG | 0.482578 | 1.1:+82043996 | MS.gene90880:CDS |
| GCAGGCTCATATCAGGAGCT+TGG | 0.487115 | 1.1:+82042503 | MS.gene90880:intron |
| AAATTTCTTTAATCCTTGCT+GGG | 0.487621 | 1.1:+82045262 | MS.gene90880:CDS |
| AGCATTCATTCCTACTGGAT+GGG | 0.487974 | 1.1:+82043997 | MS.gene90880:CDS |
| TTAAAGAAATTTCTAACCCT+CGG | 0.488137 | 1.1:-82045251 | None:intergenic |
| CAATTCTTCATGGCGGTGCA+AGG | 0.489494 | 1.1:+82040263 | MS.gene90880:CDS |
| TAGGACTATGGAAGTTCATT+CGG | 0.491317 | 1.1:+82045106 | MS.gene90880:CDS |
| TTGGTGAAATAATTGAAGAA+AGG | 0.492037 | 1.1:+82039801 | MS.gene90880:CDS |
| GACTGATATCTTCTGGCTAA+AGG | 0.492315 | 1.1:-82043855 | None:intergenic |
| CATGGAAGCCTGTGATGAAA+AGG | 0.492401 | 1.1:+82045082 | MS.gene90880:CDS |
| TGGTGAAATAATTGAAGAAA+GGG | 0.497536 | 1.1:+82039802 | MS.gene90880:CDS |
| GCATTCATTCCTACTGGATG+GGG | 0.500451 | 1.1:+82043998 | MS.gene90880:CDS |
| ACCAGCCAGCGCCAACAAAA+GGG | 0.503012 | 1.1:-82043915 | None:intergenic |
| TTGGGCTTCGTTCTTGAACA+AGG | 0.503971 | 1.1:+82039914 | MS.gene90880:CDS |
| GAGAAGAAAGCTGGGAAGCT+TGG | 0.504374 | 1.1:+82042237 | MS.gene90880:CDS |
| AACCACGAAAAGAATGCAAT+GGG | 0.505595 | 1.1:-82045177 | None:intergenic |
| TCTTGAACAAGGCTTCTTGA+GGG | 0.507744 | 1.1:+82039925 | MS.gene90880:CDS |
| AAAATAGAAGCAAATATGTC+CGG | 0.508314 | 1.1:-82043974 | None:intergenic |
| TTGTATAGATTGCTGCTGCA+TGG | 0.520895 | 1.1:+82045064 | MS.gene90880:intron |
| CTTGCTTATGGCTACAATGA+TGG | 0.522562 | 1.1:+82041740 | MS.gene90880:CDS |
| CTTGCACGTCTATATGATGC+TGG | 0.525096 | 1.1:+82045132 | MS.gene90880:CDS |
| CAAATATGTCCGGTACAGAT+AGG | 0.529054 | 1.1:-82043964 | None:intergenic |
| TTCTTGAACAAGGCTTCTTG+AGG | 0.534204 | 1.1:+82039924 | MS.gene90880:CDS |
| AACTCGCCTGATGTTTAACC+AGG | 0.535655 | 1.1:+82045221 | MS.gene90880:CDS |
| TATATTCACTGCTGTGCCAA+TGG | 0.536868 | 1.1:+82039889 | MS.gene90880:CDS |
| AGGAACTGATACTTCATTGA+CGG | 0.539585 | 1.1:+82042605 | MS.gene90880:CDS |
| ACAGGTTTATGGATTATCAT+GGG | 0.544377 | 1.1:+82043708 | MS.gene90880:intron |
| AAGAAAGCTGGGAAGCTTGG+TGG | 0.545199 | 1.1:+82042240 | MS.gene90880:CDS |
| TTTGCCACTCAAATCCTGAC+GGG | 0.549266 | 1.1:-82041844 | None:intergenic |
| TGTTAAGGGAGAAGAAAGCT+GGG | 0.550369 | 1.1:+82042229 | MS.gene90880:CDS |
| ATTAACTGACCTATCTGTAC+CGG | 0.552710 | 1.1:+82043955 | MS.gene90880:CDS |
| AGAAAGCTGGGAAGCTTGGT+GGG | 0.554025 | 1.1:+82042241 | MS.gene90880:CDS |
| TCAATTTCCAACTTGTGTTG+CGG | 0.555639 | 1.1:+82043876 | MS.gene90880:CDS |
| TGTCAACAGTATCAAGCGAC+AGG | 0.556294 | 1.1:+82040349 | MS.gene90880:intron |
| CTGGGAACAATCCCAATACT+GGG | 0.564727 | 1.1:+82045280 | MS.gene90880:CDS |
| AGAACGAAGCCCAAGACCAT+TGG | 0.567981 | 1.1:-82039905 | None:intergenic |
| CATATTGGTCTTGGTTAAAG+GGG | 0.570137 | 1.1:+82038492 | MS.gene90880:CDS |
| AATTCTTCATGGCGGTGCAA+GGG | 0.573415 | 1.1:+82040264 | MS.gene90880:CDS |
| TATTGGGATTGTTCCCAGCA+AGG | 0.578363 | 1.1:-82045275 | None:intergenic |
| AATTGGCTACTTTATAGAGG+TGG | 0.581777 | 1.1:+82042200 | MS.gene90880:CDS |
| CGTCTATATGATGCTGGCAT+GGG | 0.583177 | 1.1:+82045138 | MS.gene90880:CDS |
| TTCACAGACCAAGCACATCA+AGG | 0.591733 | 1.1:-82038516 | None:intergenic |
| ACGTCTATATGATGCTGGCA+TGG | 0.592963 | 1.1:+82045137 | MS.gene90880:CDS |
| GTAGCCAATTTGTCCAGTCT+CGG | 0.596399 | 1.1:-82042187 | None:intergenic |
| AAACCACGAAAAGAATGCAA+TGG | 0.598378 | 1.1:-82045178 | None:intergenic |
| GTACAAACCGCAACACAAGT+TGG | 0.600868 | 1.1:-82043883 | None:intergenic |
| GATAAAATTCCCCATCCAGT+AGG | 0.616607 | 1.1:-82044007 | None:intergenic |
| AAGCCTGTGATGAAAAGGCT+AGG | 0.620166 | 1.1:+82045087 | MS.gene90880:CDS |
| TCAACCCGTCAGGATTTGAG+TGG | 0.623498 | 1.1:+82041840 | MS.gene90880:CDS |
| TTAACCAGGCATTTAGCCGA+GGG | 0.627695 | 1.1:+82045235 | MS.gene90880:CDS |
| TATGGCGAACTACAAATCCT+CGG | 0.632140 | 1.1:-82040372 | None:intergenic |
| GCTTATGGCTACAATGATGG+TGG | 0.632490 | 1.1:+82041743 | MS.gene90880:CDS |
| CAAACCTATCTCTTCACCCA+TGG | 0.636466 | 1.1:-82038461 | None:intergenic |
| TAAATAGGGAGCAAACAACC+AGG | 0.637215 | 1.1:-82041816 | None:intergenic |
| TTTAACCAGGCATTTAGCCG+AGG | 0.641160 | 1.1:+82045234 | MS.gene90880:CDS |
| TAAAACAAATGGCCAAACTG+AGG | 0.684118 | 1.1:+82038815 | MS.gene90880:CDS |
| GGACGAACAATTCTTCATGG+CGG | 0.702627 | 1.1:+82040256 | MS.gene90880:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAAACTATTAATTATC+TGG | - | chr1.1:82039342-82039361 | None:intergenic | 10.0% |
| !! | TTAAGTTAATAAAAATTCAA+AGG | - | chr1.1:82042655-82042674 | None:intergenic | 10.0% |
| !!! | AATTAATAGTTTTAATTCAA+TGG | + | chr1.1:82039345-82039364 | MS.gene90880:intron | 10.0% |
| !! | ACATTCTATTTAAAAAGTTA+TGG | + | chr1.1:82039385-82039404 | MS.gene90880:intron | 15.0% |
| !! | ACTAAATCTGTAAAAAAAAA+AGG | + | chr1.1:82043556-82043575 | MS.gene90880:intron | 15.0% |
| !! | GTCGAATATAAAATAAATTA+AGG | - | chr1.1:82043631-82043650 | None:intergenic | 15.0% |
| !! | TATCTTAAGAATCTATTTAT+CGG | - | chr1.1:82044874-82044893 | None:intergenic | 15.0% |
| !! | TTAGCAAATTATAAAAGAAA+TGG | - | chr1.1:82040321-82040340 | None:intergenic | 15.0% |
| !!! | AAAAAAAAGTTTGACTTTTT+TGG | - | chr1.1:82040143-82040162 | None:intergenic | 15.0% |
| !!! | AAACAAGAATTTTTTTATTC+CGG | + | chr1.1:82042068-82042087 | MS.gene90880:intron | 15.0% |
| !!! | AACATAAAATTTTATAGATG+TGG | - | chr1.1:82039236-82039255 | None:intergenic | 15.0% |
| !!! | AATAAGATAAAAAGTTGATA+AGG | - | chr1.1:82044847-82044866 | None:intergenic | 15.0% |
| !!! | AATTTTCAGAAAATTTGATA+TGG | - | chr1.1:82040393-82040412 | None:intergenic | 15.0% |
| !!! | ATAAGATAAAAAGTTGATAA+GGG | - | chr1.1:82044846-82044865 | None:intergenic | 15.0% |
| !!! | ATTCAAATATTTCTAAAAAC+TGG | - | chr1.1:82039146-82039165 | None:intergenic | 15.0% |
| !!! | CAGTTTTTTTTTTTTTTGAA+TGG | + | chr1.1:82041349-82041368 | MS.gene90880:intron | 15.0% |
| !!! | CTTATATTGCTTTTATTTAA+AGG | + | chr1.1:82044161-82044180 | MS.gene90880:intron | 15.0% |
| !! | AAAAAAACTGTCTAAAAACT+AGG | - | chr1.1:82041339-82041358 | None:intergenic | 20.0% |
| !! | AAACAATATACACATATATG+AGG | - | chr1.1:82039449-82039468 | None:intergenic | 20.0% |
| !! | AATTCTTGAAAAATAAGGAT+GGG | - | chr1.1:82041538-82041557 | None:intergenic | 20.0% |
| !! | AATTGTAACATATAAGATGT+TGG | + | chr1.1:82044588-82044607 | MS.gene90880:intron | 20.0% |
| !! | AGAATAATTGAACAAAGTAA+AGG | + | chr1.1:82039642-82039661 | MS.gene90880:intron | 20.0% |
| !! | ATGAGAAATAAATATCCAAT+TGG | + | chr1.1:82038538-82038557 | MS.gene90880:intron | 20.0% |
| !! | ATTAATTGTAGTTGAATCAA+CGG | - | chr1.1:82044369-82044388 | None:intergenic | 20.0% |
| !! | CTATTAATTATCTGGATTAT+TGG | - | chr1.1:82039334-82039353 | None:intergenic | 20.0% |
| !! | TCAAATTAGGTCATTTAAAA+TGG | - | chr1.1:82044508-82044527 | None:intergenic | 20.0% |
| !! | TGTATATTAGCAGAAAAATA+TGG | - | chr1.1:82044562-82044581 | None:intergenic | 20.0% |
| !! | TTAGCAATTCTTGAAAAATA+AGG | - | chr1.1:82041543-82041562 | None:intergenic | 20.0% |
| !! | TTTACTTTGTTCAATTATTC+TGG | - | chr1.1:82039643-82039662 | None:intergenic | 20.0% |
| !!! | AGATTTTTCATTTTCCAATA+TGG | + | chr1.1:82042558-82042577 | MS.gene90880:CDS | 20.0% |
| !!! | AGATTTTTCTGAATCATTTA+TGG | + | chr1.1:82038736-82038755 | MS.gene90880:intron | 20.0% |
| !!! | AGTGCTAATAATTCTTTTTA+AGG | + | chr1.1:82043741-82043760 | MS.gene90880:CDS | 20.0% |
| !!! | ATTGACATTTTAATAAATCC+CGG | + | chr1.1:82043485-82043504 | MS.gene90880:intron | 20.0% |
| !!! | ATTTTAACAAAATCGTAGAA+TGG | + | chr1.1:82043077-82043096 | MS.gene90880:intron | 20.0% |
| !!! | CAAATTAGGTCATTTAAAAT+GGG | - | chr1.1:82044507-82044526 | None:intergenic | 20.0% |
| !!! | GTTTTTTTCACTTTTTCTTT+GGG | + | chr1.1:82040214-82040233 | MS.gene90880:CDS | 20.0% |
| !!! | TGAATGATATTTTGTGAAAA+TGG | + | chr1.1:82040111-82040130 | MS.gene90880:intron | 20.0% |
| !!! | TGTTTTTTTCACTTTTTCTT+TGG | + | chr1.1:82040213-82040232 | MS.gene90880:CDS | 20.0% |
| !!! | TTATTTTTGCCATTTTATAC+AGG | + | chr1.1:82043690-82043709 | MS.gene90880:intron | 20.0% |
| !!! | TTTTAACAAAATCGTAGAAT+GGG | + | chr1.1:82043078-82043097 | MS.gene90880:intron | 20.0% |
| ! | AAAAGAAATGGAGTAAAAGA+GGG | - | chr1.1:82040309-82040328 | None:intergenic | 25.0% |
| ! | AAAATAGAAGCAAATATGTC+CGG | - | chr1.1:82043977-82043996 | None:intergenic | 25.0% |
| ! | AAACAAACATCAACTGAAAA+AGG | - | chr1.1:82044220-82044239 | None:intergenic | 25.0% |
| ! | AAATTTCTTTAATCCTTGCT+GGG | + | chr1.1:82045262-82045281 | MS.gene90880:CDS | 25.0% |
| ! | AACCTAGTCATTAATAACTT+TGG | + | chr1.1:82042335-82042354 | MS.gene90880:intron | 25.0% |
| ! | AATTGTTCGTCCAAAATAAT+GGG | - | chr1.1:82040248-82040267 | None:intergenic | 25.0% |
| ! | AGATATAACCAAAGAAAACA+CGG | + | chr1.1:82039981-82040000 | MS.gene90880:intron | 25.0% |
| ! | ATCCATAAACCTGTATAAAA+TGG | - | chr1.1:82043702-82043721 | None:intergenic | 25.0% |
| ! | ATGAACAAGTGTTTATAAGT+GGG | - | chr1.1:82038902-82038921 | None:intergenic | 25.0% |
| ! | ATTCAAGGTTCCTTAAATAA+AGG | - | chr1.1:82040867-82040886 | None:intergenic | 25.0% |
| ! | CAAAGATACTATCAGAAATA+CGG | - | chr1.1:82043267-82043286 | None:intergenic | 25.0% |
| ! | CAATTCTTGAAAAATAAGGA+TGG | - | chr1.1:82041539-82041558 | None:intergenic | 25.0% |
| ! | CATTTATGAAAGAAATTGTC+AGG | + | chr1.1:82042359-82042378 | MS.gene90880:intron | 25.0% |
| ! | GATATATCAAAATTGTGCAT+TGG | + | chr1.1:82044675-82044694 | MS.gene90880:intron | 25.0% |
| ! | GATTATGATTATTCCATTCA+AGG | - | chr1.1:82041669-82041688 | None:intergenic | 25.0% |
| ! | GTGTATAAGCTTAACATAAA+AGG | + | chr1.1:82042585-82042604 | MS.gene90880:CDS | 25.0% |
| ! | TAAAAGAAATGGAGTAAAAG+AGG | - | chr1.1:82040310-82040329 | None:intergenic | 25.0% |
| ! | TATGAACAAGTGTTTATAAG+TGG | - | chr1.1:82038903-82038922 | None:intergenic | 25.0% |
| ! | TCAAACTAAGTAAATTGAAC+CGG | + | chr1.1:82040688-82040707 | MS.gene90880:intron | 25.0% |
| ! | TCAACTATGTCACATAATAT+TGG | + | chr1.1:82044710-82044729 | MS.gene90880:intron | 25.0% |
| ! | TCTGATGCAGAAAAAAAAAA+TGG | + | chr1.1:82043399-82043418 | MS.gene90880:intron | 25.0% |
| ! | TCTTTATGGAAAAACGTATT+TGG | + | chr1.1:82039544-82039563 | MS.gene90880:CDS | 25.0% |
| ! | TGGTGAAATAATTGAAGAAA+GGG | + | chr1.1:82039802-82039821 | MS.gene90880:CDS | 25.0% |
| ! | TGTTTCCAACTGTTAAATAA+AGG | + | chr1.1:82042689-82042708 | MS.gene90880:intron | 25.0% |
| ! | TTAAAGAAATTTCTAACCCT+CGG | - | chr1.1:82045254-82045273 | None:intergenic | 25.0% |
| ! | TTCAAGGTTCCTTAAATAAA+GGG | - | chr1.1:82040866-82040885 | None:intergenic | 25.0% |
| ! | TTGGTGAAATAATTGAAGAA+AGG | + | chr1.1:82039801-82039820 | MS.gene90880:CDS | 25.0% |
| ! | TTTCCTTGATTTATGTTACT+AGG | - | chr1.1:82043536-82043555 | None:intergenic | 25.0% |
| !! | AACTTCCTTTATTTAACAGT+TGG | - | chr1.1:82042697-82042716 | None:intergenic | 25.0% |
| !! | ATACGTTTTTCCATAAAGAA+AGG | - | chr1.1:82039543-82039562 | None:intergenic | 25.0% |
| !! | ATAGTGCACATTTTCAAATT+AGG | - | chr1.1:82044521-82044540 | None:intergenic | 25.0% |
| !! | CTCTCTTATTGTGTATTTTA+GGG | + | chr1.1:82042151-82042170 | MS.gene90880:intron | 25.0% |
| !! | TAAAGGAACATTTTTGTACT+AGG | + | chr1.1:82039766-82039785 | MS.gene90880:intron | 25.0% |
| !! | TCTCTCTTATTGTGTATTTT+AGG | + | chr1.1:82042150-82042169 | MS.gene90880:intron | 25.0% |
| !! | TGAAATTTCCTAAGTTCTAA+TGG | - | chr1.1:82041304-82041323 | None:intergenic | 25.0% |
| !! | TGAGTTTATCCCTTTATTTA+AGG | + | chr1.1:82040854-82040873 | MS.gene90880:intron | 25.0% |
| !! | TTGATAGTATATCTTGCTTA+TGG | + | chr1.1:82041728-82041747 | MS.gene90880:CDS | 25.0% |
| !!! | AAAAGTTTGACTTTTTTGGA+TGG | - | chr1.1:82040139-82040158 | None:intergenic | 25.0% |
| !!! | AAATTTTTGAGATGAAACAC+TGG | - | chr1.1:82040025-82040044 | None:intergenic | 25.0% |
| !!! | ATTTCTAAAAACTGGTTTTG+TGG | - | chr1.1:82039138-82039157 | None:intergenic | 25.0% |
| !!! | CGTTTTTGATTTATCTTACT+AGG | - | chr1.1:82041114-82041133 | None:intergenic | 25.0% |
| !!! | CTATACTGTTTTCAAGATTT+CGG | - | chr1.1:82043007-82043026 | None:intergenic | 25.0% |
| !!! | CTATTTTGTTATTTGACATC+TGG | + | chr1.1:82044900-82044919 | MS.gene90880:intron | 25.0% |
| !!! | TATACTGTTTTCAAGATTTC+GGG | - | chr1.1:82043006-82043025 | None:intergenic | 25.0% |
| !!! | TTGGTCTTTTTTTTTCTGAT+AGG | - | chr1.1:82042443-82042462 | None:intergenic | 25.0% |
| !!! | TTTCTAAAAACTGGTTTTGT+GGG | - | chr1.1:82039137-82039156 | None:intergenic | 25.0% |
| AAAATCCCAGGCAAATAATA+AGG | - | chr1.1:82043062-82043081 | None:intergenic | 30.0% | |
| AAATACCACCCTAAAACAAA+TGG | + | chr1.1:82038804-82038823 | MS.gene90880:CDS | 30.0% | |
| AAATGAAAAATCTCAGACTC+AGG | - | chr1.1:82042551-82042570 | None:intergenic | 30.0% | |
| AACCTAACTGTAAACTGATA+AGG | - | chr1.1:82040503-82040522 | None:intergenic | 30.0% | |
| AACTACAATTTCTTGCAAGA+AGG | + | chr1.1:82040631-82040650 | MS.gene90880:intron | 30.0% | |
| AATTAATGCTGCATTAGAAC+TGG | + | chr1.1:82044382-82044401 | MS.gene90880:intron | 30.0% | |
| ACAGTTTATGCCTTTCTTTA+TGG | + | chr1.1:82039530-82039549 | MS.gene90880:CDS | 30.0% | |
| ACCTAATTTAATGTGCCAAT+GGG | + | chr1.1:82042873-82042892 | MS.gene90880:intron | 30.0% | |
| ACTAAGTTATGCTAAAAGAG+TGG | + | chr1.1:82042727-82042746 | MS.gene90880:intron | 30.0% | |
| AGAATTAAACTTGCCAATCA+AGG | - | chr1.1:82042010-82042029 | None:intergenic | 30.0% | |
| AGATGCACAAACTTGAAATT+CGG | + | chr1.1:82042910-82042929 | MS.gene90880:intron | 30.0% | |
| AGGTGTGAAATTGAATAATG+TGG | + | chr1.1:82043761-82043780 | MS.gene90880:intron | 30.0% | |
| ATAAGATAATGCTCTTGAGA+AGG | + | chr1.1:82040885-82040904 | MS.gene90880:intron | 30.0% | |
| ATAAGCAACTATTTCAACAG+AGG | - | chr1.1:82041901-82041920 | None:intergenic | 30.0% | |
| ATAGAATCAAACAACAATGC+AGG | - | chr1.1:82044131-82044150 | None:intergenic | 30.0% | |
| ATATGAGGAATCAAATTCAC+CGG | - | chr1.1:82039434-82039453 | None:intergenic | 30.0% | |
| ATCAACTTTCATTTCCTTTG+AGG | + | chr1.1:82042105-82042124 | MS.gene90880:intron | 30.0% | |
| ATTCAAGGTATAGGACAATA+AGG | - | chr1.1:82041654-82041673 | None:intergenic | 30.0% | |
| CAAATCCTTATTATTTGCCT+GGG | + | chr1.1:82043054-82043073 | MS.gene90880:intron | 30.0% | |
| CGTTGGAAATATACAAGAAA+TGG | + | chr1.1:82042805-82042824 | MS.gene90880:intron | 30.0% | |
| CTATGTCACATAATATTGGA+CGG | + | chr1.1:82044714-82044733 | MS.gene90880:intron | 30.0% | |
| CTTATGGATCACAATACAAT+TGG | - | chr1.1:82044776-82044795 | None:intergenic | 30.0% | |
| CTTCTCTAATAATGTACTTC+TGG | - | chr1.1:82039198-82039217 | None:intergenic | 30.0% | |
| GAAAAACGTATTTGGTAAGT+TGG | + | chr1.1:82039552-82039571 | MS.gene90880:intron | 30.0% | |
| GAAATTTCTTTAATCCTTGC+TGG | + | chr1.1:82045261-82045280 | MS.gene90880:CDS | 30.0% | |
| GAATTGTTCGTCCAAAATAA+TGG | - | chr1.1:82040249-82040268 | None:intergenic | 30.0% | |
| GACCAAAGTTATTAATGACT+AGG | - | chr1.1:82042340-82042359 | None:intergenic | 30.0% | |
| GAGCCAGAAAAATTACAAAT+CGG | - | chr1.1:82041140-82041159 | None:intergenic | 30.0% | |
| GATATAACCAAAGAAAACAC+GGG | + | chr1.1:82039982-82040001 | MS.gene90880:intron | 30.0% | |
| GATTATTCCATTCAAGGTAT+AGG | - | chr1.1:82041663-82041682 | None:intergenic | 30.0% | |
| TAAGATAATGCTCTTGAGAA+GGG | + | chr1.1:82040886-82040905 | MS.gene90880:intron | 30.0% | |
| TAATAAACACATTGCATCAG+AGG | - | chr1.1:82044048-82044067 | None:intergenic | 30.0% | |
| TAGTCGACTAACTATTTAAG+AGG | + | chr1.1:82042415-82042434 | MS.gene90880:intron | 30.0% | |
| TGAAACTCAACAAAGATAGA+TGG | + | chr1.1:82043101-82043120 | MS.gene90880:intron | 30.0% | |
| TGAACAAGTGTTTATAAGTG+GGG | - | chr1.1:82038901-82038920 | None:intergenic | 30.0% | |
| TGAATGACAACTGATCATAA+AGG | + | chr1.1:82039161-82039180 | MS.gene90880:intron | 30.0% | |
| TGGTAGAAAAAGAAAGGAAA+CGG | - | chr1.1:82038695-82038714 | None:intergenic | 30.0% | |
| TGTCCTAGTAACATAAATCA+AGG | + | chr1.1:82043530-82043549 | MS.gene90880:intron | 30.0% | |
| TTATTCATCTCATTCAACTG+TGG | + | chr1.1:82044745-82044764 | MS.gene90880:intron | 30.0% | |
| TTATTGTCCTATACCTTGAA+TGG | + | chr1.1:82041653-82041672 | MS.gene90880:intron | 30.0% | |
| TTCGTGTTAGTTATTTGTCT+GGG | + | chr1.1:82043169-82043188 | MS.gene90880:intron | 30.0% | |
| TTGATTTATGTTACTAGGAC+AGG | - | chr1.1:82043531-82043550 | None:intergenic | 30.0% | |
| TTTCGTGTTAGTTATTTGTC+TGG | + | chr1.1:82043168-82043187 | MS.gene90880:intron | 30.0% | |
| TTTGCAATTATTTCATCTGC+AGG | + | chr1.1:82042485-82042504 | MS.gene90880:intron | 30.0% | |
| ! | ACAAATTGGCTACTTTATAG+AGG | + | chr1.1:82042197-82042216 | MS.gene90880:CDS | 30.0% |
| ! | ACAGGTTTATGGATTATCAT+GGG | + | chr1.1:82043708-82043727 | MS.gene90880:intron | 30.0% |
| ! | ATGCTTTTCCAAGTATAACT+TGG | + | chr1.1:82041271-82041290 | MS.gene90880:intron | 30.0% |
| ! | ATGGACTGAATTGTTCAAAT+TGG | + | chr1.1:82038755-82038774 | MS.gene90880:intron | 30.0% |
| ! | GAATACTAATCTGAAGTGTA+CGG | - | chr1.1:82039307-82039326 | None:intergenic | 30.0% |
| ! | GCTTATCTTGTTGTCATAAT+TGG | - | chr1.1:82042462-82042481 | None:intergenic | 30.0% |
| ! | GTCATTTAAAATGGGATGAA+GGG | - | chr1.1:82044499-82044518 | None:intergenic | 30.0% |
| ! | GTTTGGAATGTTGATACAAA+TGG | - | chr1.1:82045204-82045223 | None:intergenic | 30.0% |
| ! | TAAAAACTAGGTATTTTCCC+AGG | - | chr1.1:82041327-82041346 | None:intergenic | 30.0% |
| ! | TACAGGTTTATGGATTATCA+TGG | + | chr1.1:82043707-82043726 | MS.gene90880:intron | 30.0% |
| ! | TACGATTTTGTTAAAATCCC+AGG | - | chr1.1:82043074-82043093 | None:intergenic | 30.0% |
| ! | TTGTTTGTACAGTTTTCTGT+TGG | - | chr1.1:82040716-82040735 | None:intergenic | 30.0% |
| !! | AAATAATAAGGATTTGCTGG+AGG | - | chr1.1:82043050-82043069 | None:intergenic | 30.0% |
| !! | AATAATAAGGATTTGCTGGA+GGG | - | chr1.1:82043049-82043068 | None:intergenic | 30.0% |
| !! | ATCATATTGGTCTTGGTTAA+AGG | + | chr1.1:82038490-82038509 | MS.gene90880:CDS | 30.0% |
| !! | ATTTTAGCATTCATTCCTAC+TGG | + | chr1.1:82043992-82044011 | MS.gene90880:CDS | 30.0% |
| !! | CAAGAGCATTATCTTATTCA+AGG | - | chr1.1:82040882-82040901 | None:intergenic | 30.0% |
| !! | CTCGTAGTCATTTTGTTAAA+GGG | + | chr1.1:82040425-82040444 | MS.gene90880:CDS | 30.0% |
| !! | TAAAAAGTTGATAAGGGAGA+TGG | - | chr1.1:82044840-82044859 | None:intergenic | 30.0% |
| !! | TCATATTGGTCTTGGTTAAA+GGG | + | chr1.1:82038491-82038510 | MS.gene90880:CDS | 30.0% |
| !! | TCTCGTAGTCATTTTGTTAA+AGG | + | chr1.1:82040424-82040443 | MS.gene90880:CDS | 30.0% |
| !! | TGAGTAATTTGTTGCTAGAT+TGG | + | chr1.1:82041378-82041397 | MS.gene90880:intron | 30.0% |
| !! | TTATTTTATCTTTCCGCTGT+TGG | + | chr1.1:82044069-82044088 | MS.gene90880:intron | 30.0% |
| !!! | ATTTGTAATTTTTCTGGCTC+TGG | + | chr1.1:82041140-82041159 | MS.gene90880:intron | 30.0% |
| !!! | CAAACTTTTTTTTTGTCTGC+AGG | + | chr1.1:82040150-82040169 | MS.gene90880:intron | 30.0% |
| !!! | TAGCCGATTTGTAATTTTTC+TGG | + | chr1.1:82041134-82041153 | MS.gene90880:intron | 30.0% |
| !!! | TATTGTGTATTTTAGGGTAG+TGG | + | chr1.1:82042157-82042176 | MS.gene90880:intron | 30.0% |
| !!! | TGCCATTTTATACAGGTTTA+TGG | + | chr1.1:82043697-82043716 | MS.gene90880:intron | 30.0% |
| !!! | TTCTAAAAACTGGTTTTGTG+GGG | - | chr1.1:82039136-82039155 | None:intergenic | 30.0% |
| !!! | TTTGTAATTTTTCTGGCTCT+GGG | + | chr1.1:82041141-82041160 | MS.gene90880:intron | 30.0% |
| AAACCACGAAAAGAATGCAA+TGG | - | chr1.1:82045181-82045200 | None:intergenic | 35.0% | |
| AAAGAGTGATTAAGCAGTCT+TGG | + | chr1.1:82041499-82041518 | MS.gene90880:intron | 35.0% | |
| AACCACGAAAAGAATGCAAT+GGG | - | chr1.1:82045180-82045199 | None:intergenic | 35.0% | |
| AATGTTTATTAGTTACGCCC+TGG | + | chr1.1:82044250-82044269 | MS.gene90880:intron | 35.0% | |
| ACACAGTTTCTCTTCCAAAT+TGG | + | chr1.1:82039866-82039885 | MS.gene90880:CDS | 35.0% | |
| ACACTATTCAATGTGCTGAA+AGG | + | chr1.1:82044961-82044980 | MS.gene90880:intron | 35.0% | |
| ACCCATTGGCACATTAAATT+AGG | - | chr1.1:82042877-82042896 | None:intergenic | 35.0% | |
| ACCTGAAGACAAGAAGATAA+AGG | - | chr1.1:82041691-82041710 | None:intergenic | 35.0% | |
| ACTATCAGATTTCTGCTATC+AGG | - | chr1.1:82039014-82039033 | None:intergenic | 35.0% | |
| ACTCTTTGTCTAAAAACCAG+GGG | - | chr1.1:82041486-82041505 | None:intergenic | 35.0% | |
| ACTTAAGTATCAGACTCTTC+TGG | - | chr1.1:82039717-82039736 | None:intergenic | 35.0% | |
| AGAACTTAGGAAATTTCACC+TGG | + | chr1.1:82041306-82041325 | MS.gene90880:intron | 35.0% | |
| AGAGAAATTCAGTAGATGAG+AGG | - | chr1.1:82042135-82042154 | None:intergenic | 35.0% | |
| AGGAACTGATACTTCATTGA+CGG | + | chr1.1:82042605-82042624 | MS.gene90880:CDS | 35.0% | |
| ATACCATCTCTTATCCAATG+TGG | + | chr1.1:82038920-82038939 | MS.gene90880:intron | 35.0% | |
| ATCACATGCTTGAAATCAGT+AGG | + | chr1.1:82044092-82044111 | MS.gene90880:intron | 35.0% | |
| ATCTTGTATCCTTGCACAAT+AGG | + | chr1.1:82043826-82043845 | MS.gene90880:intron | 35.0% | |
| ATGTTTATTAGTTACGCCCT+GGG | + | chr1.1:82044251-82044270 | MS.gene90880:intron | 35.0% | |
| ATTAACTGACCTATCTGTAC+CGG | + | chr1.1:82043955-82043974 | MS.gene90880:CDS | 35.0% | |
| CAAATCCAATGTGCTTAGAA+TGG | - | chr1.1:82043299-82043318 | None:intergenic | 35.0% | |
| CACAAACTTGAAATTCGGAA+GGG | + | chr1.1:82042915-82042934 | MS.gene90880:intron | 35.0% | |
| CACTATTCAATGTGCTGAAA+GGG | + | chr1.1:82044962-82044981 | MS.gene90880:intron | 35.0% | |
| CACTCTTTGTCTAAAAACCA+GGG | - | chr1.1:82041487-82041506 | None:intergenic | 35.0% | |
| CAGCAGTGAATATACCAATT+TGG | - | chr1.1:82039883-82039902 | None:intergenic | 35.0% | |
| CTACAGTGGTAGAAAAAGAA+AGG | - | chr1.1:82038701-82038720 | None:intergenic | 35.0% | |
| CTACTTTATAGAGGTGGAAT+TGG | + | chr1.1:82042206-82042225 | MS.gene90880:CDS | 35.0% | |
| GAACAAGTGTTTATAAGTGG+GGG | - | chr1.1:82038900-82038919 | None:intergenic | 35.0% | |
| GAACTTAGGAAATTTCACCT+GGG | + | chr1.1:82041307-82041326 | MS.gene90880:intron | 35.0% | |
| GACCTAATTTAATGTGCCAA+TGG | + | chr1.1:82042872-82042891 | MS.gene90880:intron | 35.0% | |
| GATAGCAGAAATCTGATAGT+AGG | + | chr1.1:82039014-82039033 | MS.gene90880:intron | 35.0% | |
| GCAAATCCTTATTATTTGCC+TGG | + | chr1.1:82043053-82043072 | MS.gene90880:intron | 35.0% | |
| GCTTATACACAATGCCATAT+TGG | - | chr1.1:82042575-82042594 | None:intergenic | 35.0% | |
| GGAAATTGACTGATATCTTC+TGG | - | chr1.1:82043865-82043884 | None:intergenic | 35.0% | |
| GGCAAATAATAAGGATTTGC+TGG | - | chr1.1:82043053-82043072 | None:intergenic | 35.0% | |
| GGTTGTTTGATCTAACAATG+AGG | - | chr1.1:82041074-82041093 | None:intergenic | 35.0% | |
| GTCCTTATCAGTTTACAGTT+AGG | + | chr1.1:82040498-82040517 | MS.gene90880:intron | 35.0% | |
| GTTCAAACAGAGCTAACTAA+AGG | + | chr1.1:82039749-82039768 | MS.gene90880:intron | 35.0% | |
| TAAAACAAATGGCCAAACTG+AGG | + | chr1.1:82038815-82038834 | MS.gene90880:CDS | 35.0% | |
| TAAAGGTAGTTAGCAAACTG+TGG | + | chr1.1:82044178-82044197 | MS.gene90880:intron | 35.0% | |
| TAAATGCCTGGTTAAACATC+AGG | - | chr1.1:82045230-82045249 | None:intergenic | 35.0% | |
| TAACACGAAAAAATCTGCCA+TGG | - | chr1.1:82043158-82043177 | None:intergenic | 35.0% | |
| TAAGCAAGAATGGAAGGTAA+GGG | - | chr1.1:82041592-82041611 | None:intergenic | 35.0% | |
| TACCATCTCTTATCCAATGT+GGG | + | chr1.1:82038921-82038940 | MS.gene90880:intron | 35.0% | |
| TAGACCTCTTATTCTGATTG+TGG | + | chr1.1:82038586-82038605 | MS.gene90880:intron | 35.0% | |
| TAGGACTATGGAAGTTCATT+CGG | + | chr1.1:82045106-82045125 | MS.gene90880:CDS | 35.0% | |
| TATCAATGTTGTCAGTGAAG+TGG | - | chr1.1:82044807-82044826 | None:intergenic | 35.0% | |
| TATTCTTCTACCAAAACCCA+GGG | - | chr1.1:82044270-82044289 | None:intergenic | 35.0% | |
| TCAACATTTGGAAGAACAAG+TGG | - | chr1.1:82041199-82041218 | None:intergenic | 35.0% | |
| TCAACCACAATCAGAATAAG+AGG | - | chr1.1:82038593-82038612 | None:intergenic | 35.0% | |
| TCAATTTCCAACTTGTGTTG+CGG | + | chr1.1:82043876-82043895 | MS.gene90880:CDS | 35.0% | |
| TCACTCTTTGTCTAAAAACC+AGG | - | chr1.1:82041488-82041507 | None:intergenic | 35.0% | |
| TCCAAAATGGATACAAAGCA+TGG | - | chr1.1:82041169-82041188 | None:intergenic | 35.0% | |
| TCCAACCACAAAATCTAAGA+TGG | - | chr1.1:82039070-82039089 | None:intergenic | 35.0% | |
| TCCTTTATCTTCTTGTCTTC+AGG | + | chr1.1:82041687-82041706 | MS.gene90880:intron | 35.0% | |
| TGAAATCAGTAGGTAGTCTT+TGG | + | chr1.1:82044102-82044121 | MS.gene90880:intron | 35.0% | |
| TGAAGTGGAGATCAAACTTA+TGG | - | chr1.1:82044792-82044811 | None:intergenic | 35.0% | |
| TGAGATTAAGCAAGAATGGA+AGG | - | chr1.1:82041598-82041617 | None:intergenic | 35.0% | |
| TGATCTCTATAGTTCTCTCA+AGG | - | chr1.1:82040530-82040549 | None:intergenic | 35.0% | |
| TGATTGTACAATTTGAACCG+CGG | + | chr1.1:82044413-82044432 | MS.gene90880:intron | 35.0% | |
| TTAAGCAAGAATGGAAGGTA+AGG | - | chr1.1:82041593-82041612 | None:intergenic | 35.0% | |
| TTATCTTCTTGTCTTCAGGT+TGG | + | chr1.1:82041691-82041710 | MS.gene90880:intron | 35.0% | |
| TTCTTCTAAGCTTAAGCAGT+TGG | + | chr1.1:82041780-82041799 | MS.gene90880:CDS | 35.0% | |
| TTGATAGATTGTGAGATTGC+CGG | - | chr1.1:82042090-82042109 | None:intergenic | 35.0% | |
| TTTGGACGAACAATTCTTCA+TGG | + | chr1.1:82040253-82040272 | MS.gene90880:CDS | 35.0% | |
| ! | AAAGGAAACGGACAATCTTT+TGG | - | chr1.1:82038683-82038702 | None:intergenic | 35.0% |
| ! | AAGCTTAAGCAGTTGGTTTA+TGG | + | chr1.1:82041787-82041806 | MS.gene90880:CDS | 35.0% |
| ! | AATTGGCTACTTTATAGAGG+TGG | + | chr1.1:82042200-82042219 | MS.gene90880:CDS | 35.0% |
| ! | ACAAGGATTATCCCTTTTGT+TGG | + | chr1.1:82043904-82043923 | MS.gene90880:CDS | 35.0% |
| ! | ACCATGCTTTGTATCCATTT+TGG | + | chr1.1:82041165-82041184 | MS.gene90880:intron | 35.0% |
| ! | ACTTGGAAAAGCATACATCA+AGG | - | chr1.1:82041265-82041284 | None:intergenic | 35.0% |
| ! | AGTAAAAGAGGGCATAAAGT+TGG | - | chr1.1:82040298-82040317 | None:intergenic | 35.0% |
| ! | ATGCTTTGTATCCATTTTGG+AGG | + | chr1.1:82041168-82041187 | MS.gene90880:intron | 35.0% |
| ! | GGTACAAGAACCCATTATTT+TGG | + | chr1.1:82040235-82040254 | MS.gene90880:CDS | 35.0% |
| ! | GGTCATTTAAAATGGGATGA+AGG | - | chr1.1:82044500-82044519 | None:intergenic | 35.0% |
| ! | TACTGGATGGGGAATTTTAT+CGG | + | chr1.1:82044009-82044028 | MS.gene90880:CDS | 35.0% |
| ! | TGCCACTTACAAAAAATGTC+TGG | - | chr1.1:82044942-82044961 | None:intergenic | 35.0% |
| ! | TGCTTTGTATCCATTTTGGA+GGG | + | chr1.1:82041169-82041188 | MS.gene90880:intron | 35.0% |
| ! | TTTGTTTCCCGTGTTTTCTT+TGG | - | chr1.1:82039992-82040011 | None:intergenic | 35.0% |
| ! | TTTTTGTACTAGGCACTTTC+TGG | + | chr1.1:82039776-82039795 | MS.gene90880:intron | 35.0% |
| !! | AAGAATTGGCTTTACCAAGT+AGG | + | chr1.1:82043197-82043216 | MS.gene90880:intron | 35.0% |
| !! | AGAATTGGCTTTACCAAGTA+GGG | + | chr1.1:82043198-82043217 | MS.gene90880:intron | 35.0% |
| !! | AGGTTTGGCTTTGATCATAT+TGG | + | chr1.1:82038477-82038496 | MS.gene90880:CDS | 35.0% |
| !! | AGTCATTTTGTTAAAGGGTG+AGG | + | chr1.1:82040430-82040449 | MS.gene90880:intron | 35.0% |
| !! | CATATTGGTCTTGGTTAAAG+GGG | + | chr1.1:82038492-82038511 | MS.gene90880:CDS | 35.0% |
| !! | GCAGTACTAAAGTATTGTAC+CGG | + | chr1.1:82039412-82039431 | MS.gene90880:intron | 35.0% |
| !! | TCAGTTTGGCCATTTGTTTT+AGG | - | chr1.1:82038816-82038835 | None:intergenic | 35.0% |
| !! | TTTCAACAGAGGCATTACAA+AGG | - | chr1.1:82041890-82041909 | None:intergenic | 35.0% |
| !!! | CAGTTTGGCCATTTGTTTTA+GGG | - | chr1.1:82038815-82038834 | None:intergenic | 35.0% |
| !!! | GTCCAGACATTTTTTGTAAG+TGG | + | chr1.1:82044937-82044956 | MS.gene90880:intron | 35.0% |
| !!! | TTGTAATTTTTCTGGCTCTG+GGG | + | chr1.1:82041142-82041161 | MS.gene90880:intron | 35.0% |
| AAAAACTGTTGAACCAACCG+CGG | - | chr1.1:82044433-82044452 | None:intergenic | 40.0% | |
| AAATGTCTGGACAAGTGTGT+AGG | - | chr1.1:82044929-82044948 | None:intergenic | 40.0% | |
| AAATTACAGGCAACCCTACT+TGG | - | chr1.1:82043214-82043233 | None:intergenic | 40.0% | |
| AAGAGGTCTACCAACATTCA+CGG | - | chr1.1:82038576-82038595 | None:intergenic | 40.0% | |
| ACCACTGTAGTTTCAGATAG+AGG | + | chr1.1:82038711-82038730 | MS.gene90880:intron | 40.0% | |
| ACCTATCAACAACCTCAGTT+TGG | - | chr1.1:82038830-82038849 | None:intergenic | 40.0% | |
| ACTTTGTTCAACATGCTCTC+TGG | - | chr1.1:82042768-82042787 | None:intergenic | 40.0% | |
| AGCAGAAATCTGATAGTAGG+TGG | + | chr1.1:82039017-82039036 | MS.gene90880:intron | 40.0% | |
| AGCATTCATTCCTACTGGAT+GGG | + | chr1.1:82043997-82044016 | MS.gene90880:CDS | 40.0% | |
| AGGTGAATACCTATTGTGCA+AGG | - | chr1.1:82043838-82043857 | None:intergenic | 40.0% | |
| ATAACACAACCCCACAAAAC+CGG | + | chr1.1:82039091-82039110 | MS.gene90880:intron | 40.0% | |
| ATTGCAGTTACATAGACCCT+TGG | - | chr1.1:82043338-82043357 | None:intergenic | 40.0% | |
| CAAATATGTCCGGTACAGAT+AGG | - | chr1.1:82043967-82043986 | None:intergenic | 40.0% | |
| CCACTGAGATTAAGCAAGAA+TGG | - | chr1.1:82041602-82041621 | None:intergenic | 40.0% | |
| CCATTCTTGCTTAATCTCAG+TGG | + | chr1.1:82041599-82041618 | MS.gene90880:intron | 40.0% | |
| CGAACTCCATGTGTGTATTA+TGG | + | chr1.1:82040964-82040983 | MS.gene90880:intron | 40.0% | |
| CTACTGTGGAACTAAACAGA+TGG | - | chr1.1:82041027-82041046 | None:intergenic | 40.0% | |
| CTCACTTCAACCCATTGAAT+CGG | - | chr1.1:82044332-82044351 | None:intergenic | 40.0% | |
| CTCTCTTACAGAATATGTGC+AGG | + | chr1.1:82043651-82043670 | MS.gene90880:intron | 40.0% | |
| CTCTTTGTCTAAAAACCAGG+GGG | - | chr1.1:82041485-82041504 | None:intergenic | 40.0% | |
| CTGCACATATTCTGTAAGAG+AGG | - | chr1.1:82043653-82043672 | None:intergenic | 40.0% | |
| CTTGCTTATGGCTACAATGA+TGG | + | chr1.1:82041740-82041759 | MS.gene90880:CDS | 40.0% | |
| GAAAAATCTCAGACTCAGGA+TGG | - | chr1.1:82042547-82042566 | None:intergenic | 40.0% | |
| GACACTCACCAAGTTATACT+TGG | - | chr1.1:82041282-82041301 | None:intergenic | 40.0% | |
| GACTATAAAACCAAGTGCTC+TGG | + | chr1.1:82040050-82040069 | MS.gene90880:intron | 40.0% | |
| GAGAAGGGATATGCAAAACA+TGG | + | chr1.1:82040901-82040920 | MS.gene90880:intron | 40.0% | |
| GATAAAATTCCCCATCCAGT+AGG | - | chr1.1:82044010-82044029 | None:intergenic | 40.0% | |
| GATTGGTGCGTGGATATAAA+TGG | + | chr1.1:82038981-82039000 | MS.gene90880:intron | 40.0% | |
| GCAATCATGACCTCAAAAAC+CGG | - | chr1.1:82038878-82038897 | None:intergenic | 40.0% | |
| GCACAAACTTGAAATTCGGA+AGG | + | chr1.1:82042914-82042933 | MS.gene90880:intron | 40.0% | |
| GGTAAGTGTGTCTGTTTGTA+TGG | + | chr1.1:82039946-82039965 | MS.gene90880:intron | 40.0% | |
| GGTCTATGTAACTGCAATGA+TGG | + | chr1.1:82043340-82043359 | MS.gene90880:intron | 40.0% | |
| GTATTCTTCTACCAAAACCC+AGG | - | chr1.1:82044271-82044290 | None:intergenic | 40.0% | |
| GTCACATAATATTGGACGGA+GGG | + | chr1.1:82044718-82044737 | MS.gene90880:intron | 40.0% | |
| GTGAGTGTCCATTAGAACTT+AGG | + | chr1.1:82041293-82041312 | MS.gene90880:intron | 40.0% | |
| GTTAGTTATTTGTCTGGGTG+TGG | + | chr1.1:82043174-82043193 | MS.gene90880:intron | 40.0% | |
| TAAATAGGGAGCAAACAACC+AGG | - | chr1.1:82041819-82041838 | None:intergenic | 40.0% | |
| TAGCATTCATTCCTACTGGA+TGG | + | chr1.1:82043996-82044015 | MS.gene90880:CDS | 40.0% | |
| TAGGACTTCGAAGTAAACAG+AGG | - | chr1.1:82041095-82041114 | None:intergenic | 40.0% | |
| TATATTCACTGCTGTGCCAA+TGG | + | chr1.1:82039889-82039908 | MS.gene90880:CDS | 40.0% | |
| TATGGCGAACTACAAATCCT+CGG | - | chr1.1:82040375-82040394 | None:intergenic | 40.0% | |
| TCCAAGCCATAATACACACA+TGG | - | chr1.1:82040973-82040992 | None:intergenic | 40.0% | |
| TCCATGTGTGTATTATGGCT+TGG | + | chr1.1:82040969-82040988 | MS.gene90880:intron | 40.0% | |
| TCCTTATGCTCATCGCTATT+GGG | + | chr1.1:82038959-82038978 | MS.gene90880:intron | 40.0% | |
| TCTAAGCACATTGGATTTGC+TGG | + | chr1.1:82043300-82043319 | MS.gene90880:intron | 40.0% | |
| TCTTGAACAAGGCTTCTTGA+GGG | + | chr1.1:82039925-82039944 | MS.gene90880:CDS | 40.0% | |
| TCTTTGTCTAAAAACCAGGG+GGG | - | chr1.1:82041484-82041503 | None:intergenic | 40.0% | |
| TGAAGCCATTCTAAGCACAT+TGG | + | chr1.1:82043291-82043310 | MS.gene90880:intron | 40.0% | |
| TGATGAAAAGGCTAGGACTA+TGG | + | chr1.1:82045094-82045113 | MS.gene90880:CDS | 40.0% | |
| TGCAGCAGCAATCTATACAA+AGG | - | chr1.1:82045064-82045083 | None:intergenic | 40.0% | |
| TGCATCAGAGTTCCTGATAT+GGG | - | chr1.1:82043388-82043407 | None:intergenic | 40.0% | |
| TGGATTATCATGGGTCGTAT+TGG | + | chr1.1:82043717-82043736 | MS.gene90880:CDS | 40.0% | |
| TGTCAACCACCTCAAATTAC+AGG | - | chr1.1:82043227-82043246 | None:intergenic | 40.0% | |
| TGTCACATAATATTGGACGG+AGG | + | chr1.1:82044717-82044736 | MS.gene90880:intron | 40.0% | |
| TGTGTTAAAGAGTCCCACAT+TGG | - | chr1.1:82038937-82038956 | None:intergenic | 40.0% | |
| TGTTAAGGGAGAAGAAAGCT+GGG | + | chr1.1:82042229-82042248 | MS.gene90880:CDS | 40.0% | |
| TTCCTATAGACTACACCCAT+TGG | - | chr1.1:82042891-82042910 | None:intergenic | 40.0% | |
| TTCTTGAACAAGGCTTCTTG+AGG | + | chr1.1:82039924-82039943 | MS.gene90880:CDS | 40.0% | |
| TTGTATAGATTGCTGCTGCA+TGG | + | chr1.1:82045064-82045083 | MS.gene90880:intron | 40.0% | |
| ! | ACCAAACTAGCCGATTCAAT+GGG | + | chr1.1:82044319-82044338 | MS.gene90880:intron | 40.0% |
| ! | AGATTTCTGCACTAGCTCTT+GGG | - | chr1.1:82040827-82040846 | None:intergenic | 40.0% |
| ! | AGGTTTCGATATTTTGTGCC+AGG | - | chr1.1:82043511-82043530 | None:intergenic | 40.0% |
| ! | ATGTGTGTATTATGGCTTGG+AGG | + | chr1.1:82040972-82040991 | MS.gene90880:intron | 40.0% |
| ! | GACTGATATCTTCTGGCTAA+AGG | - | chr1.1:82043858-82043877 | None:intergenic | 40.0% |
| ! | GAGAGCATGTTGAACAAAGT+CGG | + | chr1.1:82042768-82042787 | MS.gene90880:intron | 40.0% |
| ! | GCCATCTTAGATTTTGTGGT+TGG | + | chr1.1:82039066-82039085 | MS.gene90880:intron | 40.0% |
| ! | GGCTTTGATCATATTGGTCT+TGG | + | chr1.1:82038483-82038502 | MS.gene90880:CDS | 40.0% |
| ! | TAATTTGAGGTGGTTGACAG+TGG | + | chr1.1:82043228-82043247 | MS.gene90880:intron | 40.0% |
| ! | TCTGGCCATCTTAGATTTTG+TGG | + | chr1.1:82039062-82039081 | MS.gene90880:intron | 40.0% |
| ! | TCTGTTTAGTTCCACAGTAG+TGG | + | chr1.1:82041027-82041046 | MS.gene90880:intron | 40.0% |
| ! | TTTGAGATGAAACACTGGCT+TGG | - | chr1.1:82040020-82040039 | None:intergenic | 40.0% |
| ! | TTTTGCCACTCAAATCCTGA+CGG | - | chr1.1:82041848-82041867 | None:intergenic | 40.0% |
| !! | ACTGACAAGATGGTGTTATG+TGG | + | chr1.1:82043129-82043148 | MS.gene90880:intron | 40.0% |
| !! | AGAGGTGGAATTGGTGTTAA+GGG | + | chr1.1:82042215-82042234 | MS.gene90880:CDS | 40.0% |
| !! | ATGGTGTTATGTGGAAACCA+TGG | + | chr1.1:82043138-82043157 | MS.gene90880:intron | 40.0% |
| !! | CATTTTAATAAATCCCGGCC+TGG | + | chr1.1:82043490-82043509 | MS.gene90880:intron | 40.0% |
| !! | CCTGACGGGTTGAATAAATA+GGG | - | chr1.1:82041833-82041852 | None:intergenic | 40.0% |
| !! | GCTTTGTATCCATTTTGGAG+GGG | + | chr1.1:82041170-82041189 | MS.gene90880:intron | 40.0% |
| !! | TAGAGGTGGAATTGGTGTTA+AGG | + | chr1.1:82042214-82042233 | MS.gene90880:CDS | 40.0% |
| !! | TCCTGACGGGTTGAATAAAT+AGG | - | chr1.1:82041834-82041853 | None:intergenic | 40.0% |
| !!! | TTTGGCCATTTGTTTTAGGG+TGG | - | chr1.1:82038812-82038831 | None:intergenic | 40.0% |
| AACTCGCCTGATGTTTAACC+AGG | + | chr1.1:82045221-82045240 | MS.gene90880:CDS | 45.0% | |
| AACTTCTGACCCGTGAATGT+TGG | + | chr1.1:82038563-82038582 | MS.gene90880:intron | 45.0% | |
| AAGCCTGTGATGAAAAGGCT+AGG | + | chr1.1:82045087-82045106 | MS.gene90880:CDS | 45.0% | |
| AATTCTTCATGGCGGTGCAA+GGG | + | chr1.1:82040264-82040283 | MS.gene90880:CDS | 45.0% | |
| ACGTCTATATGATGCTGGCA+TGG | + | chr1.1:82045137-82045156 | MS.gene90880:CDS | 45.0% | |
| ACTTCCAACTCCTTATCCCT+AGG | + | chr1.1:82041434-82041453 | MS.gene90880:intron | 45.0% | |
| ACTTCCGAGACTGGACAAAT+TGG | + | chr1.1:82042183-82042202 | MS.gene90880:CDS | 45.0% | |
| AGAGGTCTACCAACATTCAC+GGG | - | chr1.1:82038575-82038594 | None:intergenic | 45.0% | |
| AGCACTCAGAGCAGTATTCT+TGG | - | chr1.1:82039837-82039856 | None:intergenic | 45.0% | |
| ATATCAGGAGCTTGGGTTCA+AGG | + | chr1.1:82042511-82042530 | MS.gene90880:CDS | 45.0% | |
| ATGCTCATCGCTATTGGGAT+TGG | + | chr1.1:82038964-82038983 | MS.gene90880:intron | 45.0% | |
| CAAGAGCTAGTGCAGAAATC+TGG | + | chr1.1:82040826-82040845 | MS.gene90880:intron | 45.0% | |
| CAATAGCGATGAGCATAAGG+AGG | - | chr1.1:82038960-82038979 | None:intergenic | 45.0% | |
| CACTGCTACTCTGTTCAGTA+AGG | - | chr1.1:82040747-82040766 | None:intergenic | 45.0% | |
| CAGGTCACGCAATCAACATT+TGG | - | chr1.1:82041211-82041230 | None:intergenic | 45.0% | |
| CATGGAAGCCTGTGATGAAA+AGG | + | chr1.1:82045082-82045101 | MS.gene90880:CDS | 45.0% | |
| CCCTATTTATTCAACCCGTC+AGG | + | chr1.1:82041830-82041849 | MS.gene90880:CDS | 45.0% | |
| CGAAGCTGTTAAGCCTTGAT+TGG | + | chr1.1:82041994-82042013 | MS.gene90880:intron | 45.0% | |
| CGTCTATATGATGCTGGCAT+GGG | + | chr1.1:82045138-82045157 | MS.gene90880:CDS | 45.0% | |
| CTCCTTATGCTCATCGCTAT+TGG | + | chr1.1:82038958-82038977 | MS.gene90880:intron | 45.0% | |
| CTGCATCAGAGTTCCTGATA+TGG | - | chr1.1:82043389-82043408 | None:intergenic | 45.0% | |
| CTGGGAACAATCCCAATACT+GGG | + | chr1.1:82045280-82045299 | MS.gene90880:CDS | 45.0% | |
| CTTACTGAACAGAGTAGCAG+TGG | + | chr1.1:82040745-82040764 | MS.gene90880:intron | 45.0% | |
| CTTGCACGTCTATATGATGC+TGG | + | chr1.1:82045132-82045151 | MS.gene90880:CDS | 45.0% | |
| CTTGTGTTGCGGTTTGTACA+AGG | + | chr1.1:82043887-82043906 | MS.gene90880:CDS | 45.0% | |
| CTTTGTCTAAAAACCAGGGG+GGG | - | chr1.1:82041483-82041502 | None:intergenic | 45.0% | |
| GAAACAGAGTCTCCCATATC+AGG | + | chr1.1:82043373-82043392 | MS.gene90880:intron | 45.0% | |
| GATAAGGAGTTGGAAGTCCT+GGG | - | chr1.1:82041431-82041450 | None:intergenic | 45.0% | |
| GCATTCATTCCTACTGGATG+GGG | + | chr1.1:82043998-82044017 | MS.gene90880:CDS | 45.0% | |
| GCCAAACTGAGGTTGTTGAT+AGG | + | chr1.1:82038826-82038845 | MS.gene90880:intron | 45.0% | |
| GCTTATGGCTACAATGATGG+TGG | + | chr1.1:82041743-82041762 | MS.gene90880:CDS | 45.0% | |
| GGACGAACAATTCTTCATGG+CGG | + | chr1.1:82040256-82040275 | MS.gene90880:CDS | 45.0% | |
| GGTGCGTGGATATAAATGGT+GGG | + | chr1.1:82038985-82039004 | MS.gene90880:intron | 45.0% | |
| GGTTAAACATCAGGCGAGTT+TGG | - | chr1.1:82045221-82045240 | None:intergenic | 45.0% | |
| GTACAAACCGCAACACAAGT+TGG | - | chr1.1:82043886-82043905 | None:intergenic | 45.0% | |
| GTAGCCAATTTGTCCAGTCT+CGG | - | chr1.1:82042190-82042209 | None:intergenic | 45.0% | |
| GTAGGGTTGCCTGTAATTTG+AGG | + | chr1.1:82043215-82043234 | MS.gene90880:intron | 45.0% | |
| GTCAGGAACTGAACTGCTAT+GGG | + | chr1.1:82042376-82042395 | MS.gene90880:intron | 45.0% | |
| GTCCCACATTGGATAAGAGA+TGG | - | chr1.1:82038926-82038945 | None:intergenic | 45.0% | |
| GTGTTAAGGGAGAAGAAAGC+TGG | + | chr1.1:82042228-82042247 | MS.gene90880:CDS | 45.0% | |
| TATTGGGATTGTTCCCAGCA+AGG | - | chr1.1:82045278-82045297 | None:intergenic | 45.0% | |
| TCAAGCATGTGATCCAACAG+CGG | - | chr1.1:82044085-82044104 | None:intergenic | 45.0% | |
| TCAAGGCTTAACAGCTTCGT+AGG | - | chr1.1:82041993-82042012 | None:intergenic | 45.0% | |
| TCAGGAACTGAACTGCTATG+GGG | + | chr1.1:82042377-82042396 | MS.gene90880:intron | 45.0% | |
| TCCCAATAGCGATGAGCATA+AGG | - | chr1.1:82038963-82038982 | None:intergenic | 45.0% | |
| TGCCAATGGGTGTAGTCTAT+AGG | + | chr1.1:82042886-82042905 | MS.gene90880:intron | 45.0% | |
| TGGTGCGTGGATATAAATGG+TGG | + | chr1.1:82038984-82039003 | MS.gene90880:intron | 45.0% | |
| TGTACAATTTGAACCGCGGT+TGG | + | chr1.1:82044417-82044436 | MS.gene90880:intron | 45.0% | |
| TGTCAACAGTATCAAGCGAC+AGG | + | chr1.1:82040349-82040368 | MS.gene90880:intron | 45.0% | |
| TGTCAGCACTGTTAACTGCA+AGG | - | chr1.1:82039513-82039532 | None:intergenic | 45.0% | |
| TGTCAGGAACTGAACTGCTA+TGG | + | chr1.1:82042375-82042394 | MS.gene90880:intron | 45.0% | |
| TTAACCAGGCATTTAGCCGA+GGG | + | chr1.1:82045235-82045254 | MS.gene90880:CDS | 45.0% | |
| TTCACAGACCAAGCACATCA+AGG | - | chr1.1:82038519-82038538 | None:intergenic | 45.0% | |
| TTCATCTGCAGGCTCATATC+AGG | + | chr1.1:82042496-82042515 | MS.gene90880:intron | 45.0% | |
| TTGGGCTTCGTTCTTGAACA+AGG | + | chr1.1:82039914-82039933 | MS.gene90880:CDS | 45.0% | |
| TTGTCTGGGTGTGGAAGAAT+TGG | + | chr1.1:82043183-82043202 | MS.gene90880:intron | 45.0% | |
| TTGTCTTGCTACCACTACTG+TGG | - | chr1.1:82041041-82041060 | None:intergenic | 45.0% | |
| TTTAACCAGGCATTTAGCCG+AGG | + | chr1.1:82045234-82045253 | MS.gene90880:CDS | 45.0% | |
| TTTGCCACTCAAATCCTGAC+GGG | - | chr1.1:82041847-82041866 | None:intergenic | 45.0% | |
| ! | ACCCATTGAATCGGCTAGTT+TGG | - | chr1.1:82044323-82044342 | None:intergenic | 45.0% |
| ! | ACCTCAAAAACCGGCTTTGT+GGG | - | chr1.1:82038869-82038888 | None:intergenic | 45.0% |
| ! | ACTAGCTTCAGAGAGCTTTG+AGG | - | chr1.1:82042048-82042067 | None:intergenic | 45.0% |
| ! | AGATGAGAGGCATACCTCAA+AGG | - | chr1.1:82042122-82042141 | None:intergenic | 45.0% |
| ! | ATTAGTTACGCCCTGGGTTT+TGG | + | chr1.1:82044257-82044276 | MS.gene90880:intron | 45.0% |
| ! | ATTATCCCTTTTGTTGGCGC+TGG | + | chr1.1:82043910-82043929 | MS.gene90880:CDS | 45.0% |
| ! | ATTTGCTGGAGGGATCTCTT+GGG | - | chr1.1:82043039-82043058 | None:intergenic | 45.0% |
| ! | CAGATTTCTGCACTAGCTCT+TGG | - | chr1.1:82040828-82040847 | None:intergenic | 45.0% |
| ! | CGAAAGAAAACCAGAGCACT+TGG | - | chr1.1:82040063-82040082 | None:intergenic | 45.0% |
| ! | GACCAAACTAGCCGATTCAA+TGG | + | chr1.1:82044318-82044337 | MS.gene90880:intron | 45.0% |
| ! | GATTTCTGCACTAGCTCTTG+GGG | - | chr1.1:82040826-82040845 | None:intergenic | 45.0% |
| ! | GCCTCTATCTGAAACTACAG+TGG | - | chr1.1:82038715-82038734 | None:intergenic | 45.0% |
| ! | GGAAACGGACAATCTTTTGG+AGG | - | chr1.1:82038680-82038699 | None:intergenic | 45.0% |
| ! | GTTGGTTTATGGCTCTATCC+TGG | + | chr1.1:82041798-82041817 | MS.gene90880:CDS | 45.0% |
| ! | TACTAGGCACTTTCTGGTGT+TGG | + | chr1.1:82039782-82039801 | MS.gene90880:intron | 45.0% |
| ! | TGCCCATTGCATTCTTTTCG+TGG | + | chr1.1:82045175-82045194 | MS.gene90880:CDS | 45.0% |
| ! | TTCGATATTTTGTGCCAGGC+CGG | - | chr1.1:82043507-82043526 | None:intergenic | 45.0% |
| !! | AAGCACATTGGATTTGCTGG+AGG | + | chr1.1:82043303-82043322 | MS.gene90880:intron | 45.0% |
| !! | ACCTCAAAGACCGGTTTTGT+GGG | - | chr1.1:82039104-82039123 | None:intergenic | 45.0% |
| !! | AGTCCTAGCCTTTTCATCAC+AGG | - | chr1.1:82045093-82045112 | None:intergenic | 45.0% |
| !! | ATTGGATTTGCTGGAGGAGT+AGG | + | chr1.1:82043309-82043328 | MS.gene90880:intron | 45.0% |
| !! | CAATGGGTTGAAGTGAGAAC+TGG | + | chr1.1:82044335-82044354 | MS.gene90880:intron | 45.0% |
| !! | CTGCAATGATGGTTCTGACA+TGG | + | chr1.1:82043351-82043370 | MS.gene90880:intron | 45.0% |
| !! | GGGAGCTGATTTGGTATCAA+TGG | + | chr1.1:82044982-82045001 | MS.gene90880:intron | 45.0% |
| !! | TCTTGTCTTCAGGTTGGAAG+TGG | + | chr1.1:82041697-82041716 | MS.gene90880:intron | 45.0% |
| !! | TGGCTTTTTCCTCCTTCGTT+CGG | + | chr1.1:82041398-82041417 | MS.gene90880:intron | 45.0% |
| AAAGGGGTCCTTGATGTGCT+TGG | + | chr1.1:82038508-82038527 | MS.gene90880:CDS | 50.0% | |
| AAGAAAGCTGGGAAGCTTGG+TGG | + | chr1.1:82042240-82042259 | MS.gene90880:CDS | 50.0% | |
| AAGTGGTTGCCCCTCCAAAA+TGG | - | chr1.1:82041182-82041201 | None:intergenic | 50.0% | |
| ACTGCTGTGCCAATGGTCTT+GGG | + | chr1.1:82039896-82039915 | MS.gene90880:CDS | 50.0% | |
| AGAAAGCTGGGAAGCTTGGT+GGG | + | chr1.1:82042241-82042260 | MS.gene90880:CDS | 50.0% | |
| AGAACACAACCCCACAAAGC+CGG | + | chr1.1:82038856-82038875 | MS.gene90880:intron | 50.0% | |
| AGAACGAAGCCCAAGACCAT+TGG | - | chr1.1:82039908-82039927 | None:intergenic | 50.0% | |
| AGCCTGGTTCAAGATCCATC+GGG | - | chr1.1:82039043-82039062 | None:intergenic | 50.0% | |
| ATGGATCTTGAACCAGGCTC+TGG | + | chr1.1:82039044-82039063 | MS.gene90880:intron | 50.0% | |
| CAATTCTTCATGGCGGTGCA+AGG | + | chr1.1:82040263-82040282 | MS.gene90880:CDS | 50.0% | |
| CAGGCTCATATCAGGAGCTT+GGG | + | chr1.1:82042504-82042523 | MS.gene90880:intron | 50.0% | |
| CCAATCCTCACCTCAAAGAC+CGG | - | chr1.1:82039113-82039132 | None:intergenic | 50.0% | |
| CGGGTCAGAAGTTAGCCAAT+TGG | - | chr1.1:82038556-82038575 | None:intergenic | 50.0% | |
| CTGGGTTAAAACCCGAACGA+AGG | - | chr1.1:82041413-82041432 | None:intergenic | 50.0% | |
| GAGAAGAAAGCTGGGAAGCT+TGG | + | chr1.1:82042237-82042256 | MS.gene90880:CDS | 50.0% | |
| GAGCCTGGTTCAAGATCCAT+CGG | - | chr1.1:82039044-82039063 | None:intergenic | 50.0% | |
| GATGGCTGACACTGACAAGA+TGG | + | chr1.1:82043119-82043138 | MS.gene90880:intron | 50.0% | |
| GCTGGGAACAATCCCAATAC+TGG | + | chr1.1:82045279-82045298 | MS.gene90880:CDS | 50.0% | |
| GGATAAGGAGTTGGAAGTCC+TGG | - | chr1.1:82041432-82041451 | None:intergenic | 50.0% | |
| GGGTTGCCTGTAATTTGAGG+TGG | + | chr1.1:82043218-82043237 | MS.gene90880:intron | 50.0% | |
| GGTTAAAACCCGAACGAAGG+AGG | - | chr1.1:82041410-82041429 | None:intergenic | 50.0% | |
| GTGCTGAAAGGGAGCTGATT+TGG | + | chr1.1:82044973-82044992 | MS.gene90880:intron | 50.0% | |
| TAGTGGTAGACTTCCGAGAC+TGG | + | chr1.1:82042174-82042193 | MS.gene90880:CDS | 50.0% | |
| TCAACCCGTCAGGATTTGAG+TGG | + | chr1.1:82041840-82041859 | MS.gene90880:CDS | 50.0% | |
| TCCAAATTCCAACCCACGCT+TGG | + | chr1.1:82042964-82042983 | MS.gene90880:intron | 50.0% | |
| TCTAAAAACCAGGGGGGGTT+GGG | - | chr1.1:82041478-82041497 | None:intergenic | 50.0% | |
| TGAGCCTAGGGATAAGGAGT+TGG | - | chr1.1:82041441-82041460 | None:intergenic | 50.0% | |
| TGGTTGACAGTGGTAGATCG+TGG | + | chr1.1:82043238-82043257 | MS.gene90880:intron | 50.0% | |
| ! | AATCTAAGATGGCCAGAGCC+TGG | - | chr1.1:82039059-82039078 | None:intergenic | 50.0% |
| ! | AGCTTGGTGGGAAGAAGAAC+TGG | + | chr1.1:82042253-82042272 | MS.gene90880:CDS | 50.0% |
| ! | AGTGAGCTAGTCTGTGGAGT+TGG | - | chr1.1:82041236-82041255 | None:intergenic | 50.0% |
| ! | CCACAGACTAGCTCACTTGA+AGG | + | chr1.1:82041239-82041258 | MS.gene90880:intron | 50.0% |
| ! | CCTCAAAAACCGGCTTTGTG+GGG | - | chr1.1:82038868-82038887 | None:intergenic | 50.0% |
| ! | CCTTCAAGTGAGCTAGTCTG+TGG | - | chr1.1:82041242-82041261 | None:intergenic | 50.0% |
| ! | CTAGTCTGTGGAGTTGGTTC+AGG | - | chr1.1:82041230-82041249 | None:intergenic | 50.0% |
| ! | CTGGTTTGAGCCTAGGGATA+AGG | - | chr1.1:82041447-82041466 | None:intergenic | 50.0% |
| ! | GACCTCAAAAACCGGCTTTG+TGG | - | chr1.1:82038870-82038889 | None:intergenic | 50.0% |
| ! | GCGTGGATATAAATGGTGGG+TGG | + | chr1.1:82038988-82039007 | MS.gene90880:intron | 50.0% |
| ! | GTACAGTTTTCTGTTGGCGC+CGG | - | chr1.1:82040710-82040729 | None:intergenic | 50.0% |
| ! | TCGATATTTTGTGCCAGGCC+GGG | - | chr1.1:82043506-82043525 | None:intergenic | 50.0% |
| !! | CAAAACCGGTCTTTGAGGTG+AGG | + | chr1.1:82039105-82039124 | MS.gene90880:intron | 50.0% |
| !! | CACCTCAAAGACCGGTTTTG+TGG | - | chr1.1:82039105-82039124 | None:intergenic | 50.0% |
| !! | CCTCAAAGACCGGTTTTGTG+GGG | - | chr1.1:82039103-82039122 | None:intergenic | 50.0% |
| !! | CTTCGTTCGGGTTTTAACCC+AGG | + | chr1.1:82041411-82041430 | MS.gene90880:intron | 50.0% |
| !! | GATTTGCTGGAGGGATCTCT+TGG | - | chr1.1:82043040-82043059 | None:intergenic | 50.0% |
| !! | GGCTTTTTCCTCCTTCGTTC+GGG | + | chr1.1:82041399-82041418 | MS.gene90880:intron | 50.0% |
| !! | TCCAAGCGTGGGTTGGAATT+TGG | - | chr1.1:82042968-82042987 | None:intergenic | 50.0% |
| !!! | CGGCAGCTGTTTTAGTACGT+TGG | + | chr1.1:82042788-82042807 | MS.gene90880:intron | 50.0% |
| AACCAGCCAGCGCCAACAAA+AGG | - | chr1.1:82043919-82043938 | None:intergenic | 55.0% | |
| ACCAGCCAGCGCCAACAAAA+GGG | - | chr1.1:82043918-82043937 | None:intergenic | 55.0% | |
| CACTGCTGTGCCAATGGTCT+TGG | + | chr1.1:82039895-82039914 | MS.gene90880:CDS | 55.0% | |
| CCCCACAAAACCGGTCTTTG+AGG | + | chr1.1:82039100-82039119 | MS.gene90880:intron | 55.0% | |
| CTAACCCTCGGCTAAATGCC+TGG | - | chr1.1:82045242-82045261 | None:intergenic | 55.0% | |
| CTCAGCTAGACTCCAAGCGT+GGG | - | chr1.1:82042979-82042998 | None:intergenic | 55.0% | |
| GCAGGCTCATATCAGGAGCT+TGG | + | chr1.1:82042503-82042522 | MS.gene90880:intron | 55.0% | |
| GTCTAAAAACCAGGGGGGGT+TGG | - | chr1.1:82041479-82041498 | None:intergenic | 55.0% | |
| TCTCAGCTAGACTCCAAGCG+TGG | - | chr1.1:82042980-82042999 | None:intergenic | 55.0% | |
| TCTGATAGTAGGTGGCCCGA+TGG | + | chr1.1:82039025-82039044 | MS.gene90880:intron | 55.0% | |
| ! | ACTAGCTCTTGGGGAACAGG+AGG | - | chr1.1:82040817-82040836 | None:intergenic | 55.0% |
| ! | TCGCTATTGGGATTGGTGCG+TGG | + | chr1.1:82038971-82038990 | MS.gene90880:intron | 55.0% |
| ! | TGCACTAGCTCTTGGGGAAC+AGG | - | chr1.1:82040820-82040839 | None:intergenic | 55.0% |
| !! | CCCCACAAAGCCGGTTTTTG+AGG | + | chr1.1:82038865-82038884 | MS.gene90880:intron | 55.0% |
| !! | CCGGTCTTTGAGGTGAGGAT+TGG | + | chr1.1:82039110-82039129 | MS.gene90880:intron | 55.0% |
| !! | GCTCAGCTGGTTTGAGCCTA+GGG | - | chr1.1:82041453-82041472 | None:intergenic | 55.0% |
| !! | GGATTTGCTGGAGGAGTAGG+TGG | + | chr1.1:82043312-82043331 | MS.gene90880:intron | 55.0% |
| !! | TTTGTTGGCGCTGGCTGGTT+TGG | + | chr1.1:82043919-82043938 | MS.gene90880:CDS | 55.0% |
| CAGTATCAAGCGACAGGCCG+AGG | + | chr1.1:82040355-82040374 | MS.gene90880:intron | 60.0% | |
| CTCTTGGGGAACAGGAGGAG+AGG | - | chr1.1:82040812-82040831 | None:intergenic | 60.0% | |
| CTGGAGGAGTAGGTGGCCAA+GGG | + | chr1.1:82043319-82043338 | MS.gene90880:intron | 60.0% | |
| GCTAGACTCCAAGCGTGGGT+TGG | - | chr1.1:82042975-82042994 | None:intergenic | 60.0% | |
| GGCCCGATGGATCTTGAACC+AGG | + | chr1.1:82039038-82039057 | MS.gene90880:intron | 60.0% | |
| TGGGGAACAGGAGGAGAGGA+GGG | - | chr1.1:82040808-82040827 | None:intergenic | 60.0% | |
| TTGGGGAACAGGAGGAGAGG+AGG | - | chr1.1:82040809-82040828 | None:intergenic | 60.0% | |
| !! | CGCTCAGCTGGTTTGAGCCT+AGG | - | chr1.1:82041454-82041473 | None:intergenic | 60.0% |
| !!! | TCCCTTTTGTTGGCGCTGGC+TGG | + | chr1.1:82043914-82043933 | MS.gene90880:CDS | 60.0% |
| GCTGGAGGAGTAGGTGGCCA+AGG | + | chr1.1:82043318-82043337 | MS.gene90880:intron | 65.0% | |
| GGGAACAGGAGGAGAGGAGG+GGG | - | chr1.1:82040806-82040825 | None:intergenic | 65.0% | |
| GGGGAACAGGAGGAGAGGAG+GGG | - | chr1.1:82040807-82040826 | None:intergenic | 65.0% | |
| CTGAGCGACCCAACCCCCCC+TGG | + | chr1.1:82041467-82041486 | MS.gene90880:intron | 75.0% | |
| GGGGGGTTGGGTCGCTCAGC+TGG | - | chr1.1:82041466-82041485 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 82038463 | 82045308 | 82038463 | ID=MS.gene90880 |
| chr1.1 | mRNA | 82038463 | 82045308 | 82038463 | ID=MS.gene90880.t1;Parent=MS.gene90880 |
| chr1.1 | exon | 82038463 | 82038529 | 82038463 | ID=MS.gene90880.t1.exon1;Parent=MS.gene90880.t1 |
| chr1.1 | CDS | 82038463 | 82038529 | 82038463 | ID=cds.MS.gene90880.t1;Parent=MS.gene90880.t1 |
| chr1.1 | exon | 82038781 | 82038836 | 82038781 | ID=MS.gene90880.t1.exon2;Parent=MS.gene90880.t1 |
| chr1.1 | CDS | 82038781 | 82038836 | 82038781 | ID=cds.MS.gene90880.t1;Parent=MS.gene90880.t1 |
| chr1.1 | exon | 82039518 | 82039565 | 82039518 | ID=MS.gene90880.t1.exon3;Parent=MS.gene90880.t1 |
| chr1.1 | CDS | 82039518 | 82039565 | 82039518 | ID=cds.MS.gene90880.t1;Parent=MS.gene90880.t1 |
| chr1.1 | exon | 82039788 | 82039946 | 82039788 | ID=MS.gene90880.t1.exon4;Parent=MS.gene90880.t1 |
| chr1.1 | CDS | 82039788 | 82039946 | 82039788 | ID=cds.MS.gene90880.t1;Parent=MS.gene90880.t1 |
| chr1.1 | exon | 82040172 | 82040285 | 82040172 | ID=MS.gene90880.t1.exon5;Parent=MS.gene90880.t1 |
| chr1.1 | CDS | 82040172 | 82040285 | 82040172 | ID=cds.MS.gene90880.t1;Parent=MS.gene90880.t1 |
| chr1.1 | exon | 82040358 | 82040446 | 82040358 | ID=MS.gene90880.t1.exon6;Parent=MS.gene90880.t1 |
| chr1.1 | CDS | 82040358 | 82040446 | 82040358 | ID=cds.MS.gene90880.t1;Parent=MS.gene90880.t1 |
| chr1.1 | exon | 82041709 | 82041867 | 82041709 | ID=MS.gene90880.t1.exon7;Parent=MS.gene90880.t1 |
| chr1.1 | CDS | 82041709 | 82041867 | 82041709 | ID=cds.MS.gene90880.t1;Parent=MS.gene90880.t1 |
| chr1.1 | exon | 82042172 | 82042274 | 82042172 | ID=MS.gene90880.t1.exon8;Parent=MS.gene90880.t1 |
| chr1.1 | CDS | 82042172 | 82042274 | 82042172 | ID=cds.MS.gene90880.t1;Parent=MS.gene90880.t1 |
| chr1.1 | exon | 82042507 | 82042626 | 82042507 | ID=MS.gene90880.t1.exon9;Parent=MS.gene90880.t1 |
| chr1.1 | CDS | 82042507 | 82042626 | 82042507 | ID=cds.MS.gene90880.t1;Parent=MS.gene90880.t1 |
| chr1.1 | exon | 82043712 | 82043762 | 82043712 | ID=MS.gene90880.t1.exon10;Parent=MS.gene90880.t1 |
| chr1.1 | CDS | 82043712 | 82043762 | 82043712 | ID=cds.MS.gene90880.t1;Parent=MS.gene90880.t1 |
| chr1.1 | exon | 82043848 | 82044030 | 82043848 | ID=MS.gene90880.t1.exon11;Parent=MS.gene90880.t1 |
| chr1.1 | CDS | 82043848 | 82044030 | 82043848 | ID=cds.MS.gene90880.t1;Parent=MS.gene90880.t1 |
| chr1.1 | exon | 82045072 | 82045308 | 82045072 | ID=MS.gene90880.t1.exon12;Parent=MS.gene90880.t1 |
| chr1.1 | CDS | 82045072 | 82045308 | 82045072 | ID=cds.MS.gene90880.t1;Parent=MS.gene90880.t1 |
| Gene Sequence |
| Protein sequence |
