Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066566.t1 | XP_003626285.1 | 99.8 | 500 | 1 | 0 | 1 | 500 | 28 | 527 | 1.50E-274 | 954.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066566.t1 | Q940P8 | 88.8 | 500 | 56 | 0 | 1 | 500 | 28 | 527 | 3.7e-250 | 865.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066566.t1 | G7KYN5 | 99.8 | 500 | 1 | 0 | 1 | 500 | 28 | 527 | 1.1e-274 | 954.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049207 | MS.gene066566 | 0.803854 | 2.86E-49 | -1.69E-46 |
MS.gene049255 | MS.gene066566 | 0.841908 | 3.57E-58 | -1.69E-46 |
MS.gene049341 | MS.gene066566 | 0.809847 | 1.55E-50 | -1.69E-46 |
MS.gene049411 | MS.gene066566 | 0.800945 | 1.14E-48 | -1.69E-46 |
MS.gene049824 | MS.gene066566 | 0.85097 | 1.20E-60 | -1.69E-46 |
MS.gene050689 | MS.gene066566 | 0.855324 | 6.81E-62 | -1.69E-46 |
MS.gene050838 | MS.gene066566 | 0.808044 | 3.76E-50 | -1.69E-46 |
MS.gene050877 | MS.gene066566 | 0.9482 | 1.51E-106 | -1.69E-46 |
MS.gene050945 | MS.gene066566 | 0.830077 | 3.60E-55 | -1.69E-46 |
MS.gene051234 | MS.gene066566 | 0.849049 | 4.15E-60 | -1.69E-46 |
MS.gene051328 | MS.gene066566 | 0.821326 | 4.29E-53 | -1.69E-46 |
MS.gene051343 | MS.gene066566 | 0.802681 | 5.00E-49 | -1.69E-46 |
MS.gene05134 | MS.gene066566 | 0.809244 | 2.08E-50 | -1.69E-46 |
MS.gene05157 | MS.gene066566 | 0.802461 | 5.55E-49 | -1.69E-46 |
MS.gene051701 | MS.gene066566 | 0.810469 | 1.13E-50 | -1.69E-46 |
MS.gene051791 | MS.gene066566 | 0.838971 | 2.09E-57 | -1.69E-46 |
MS.gene052879 | MS.gene066566 | 0.805554 | 1.26E-49 | -1.69E-46 |
MS.gene052947 | MS.gene066566 | 0.820111 | 8.15E-53 | -1.69E-46 |
MS.gene053058 | MS.gene066566 | 0.803593 | 3.24E-49 | -1.69E-46 |
MS.gene053122 | MS.gene066566 | 0.890437 | 9.86E-74 | -1.69E-46 |
MS.gene053226 | MS.gene066566 | 0.837753 | 4.32E-57 | -1.69E-46 |
MS.gene053541 | MS.gene066566 | 0.80221 | 6.25E-49 | -1.69E-46 |
MS.gene053542 | MS.gene066566 | 0.811482 | 6.85E-51 | -1.69E-46 |
MS.gene05364 | MS.gene066566 | 0.866304 | 3.14E-65 | -1.69E-46 |
MS.gene053931 | MS.gene066566 | 0.816245 | 6.11E-52 | -1.69E-46 |
MS.gene054413 | MS.gene066566 | 0.804001 | 2.66E-49 | -1.69E-46 |
MS.gene055512 | MS.gene066566 | 0.833182 | 6.18E-56 | -1.69E-46 |
MS.gene055580 | MS.gene066566 | -0.830052 | 3.65E-55 | -1.69E-46 |
MS.gene056043 | MS.gene066566 | -0.819199 | 1.32E-52 | -1.69E-46 |
MS.gene056215 | MS.gene066566 | 0.804918 | 1.72E-49 | -1.69E-46 |
MS.gene056308 | MS.gene066566 | 0.800202 | 1.61E-48 | -1.69E-46 |
MS.gene057705 | MS.gene066566 | 0.866882 | 2.06E-65 | -1.69E-46 |
MS.gene058149 | MS.gene066566 | 0.825927 | 3.59E-54 | -1.69E-46 |
MS.gene059146 | MS.gene066566 | 0.824603 | 7.38E-54 | -1.69E-46 |
MS.gene05978 | MS.gene066566 | 0.882957 | 6.73E-71 | -1.69E-46 |
MS.gene060194 | MS.gene066566 | 0.812072 | 5.10E-51 | -1.69E-46 |
MS.gene060429 | MS.gene066566 | 0.824899 | 6.29E-54 | -1.69E-46 |
MS.gene060587 | MS.gene066566 | 0.836969 | 6.85E-57 | -1.69E-46 |
MS.gene060763 | MS.gene066566 | 0.820841 | 5.54E-53 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066566.t1 | MTR_7g113470 | 99.800 | 500 | 1 | 0 | 1 | 500 | 28 | 527 | 0.0 | 1005 |
MS.gene066566.t1 | MTR_7g067470 | 98.400 | 500 | 8 | 0 | 1 | 500 | 28 | 527 | 0.0 | 993 |
MS.gene066566.t1 | MTR_5g087560 | 37.097 | 496 | 301 | 6 | 2 | 489 | 34 | 526 | 3.72e-99 | 310 |
MS.gene066566.t1 | MTR_8g088270 | 35.742 | 512 | 298 | 9 | 2 | 489 | 30 | 534 | 2.61e-89 | 283 |
MS.gene066566.t1 | MTR_3g109925 | 35.259 | 502 | 306 | 7 | 2 | 490 | 35 | 530 | 3.07e-84 | 270 |
MS.gene066566.t1 | MTR_3g086330 | 34.406 | 497 | 314 | 7 | 2 | 490 | 39 | 531 | 8.46e-84 | 269 |
MS.gene066566.t1 | MTR_3g109925 | 32.323 | 495 | 273 | 7 | 2 | 490 | 35 | 473 | 1.74e-67 | 224 |
MS.gene066566.t1 | MTR_7g406870 | 30.159 | 504 | 330 | 8 | 2 | 489 | 28 | 525 | 6.86e-62 | 211 |
MS.gene066566.t1 | MTR_2g013540 | 30.616 | 503 | 327 | 12 | 2 | 490 | 30 | 524 | 2.67e-61 | 210 |
MS.gene066566.t1 | MTR_6g032870 | 28.715 | 498 | 342 | 8 | 3 | 493 | 33 | 524 | 7.59e-52 | 184 |
MS.gene066566.t1 | MTR_1g030650 | 28.112 | 498 | 345 | 8 | 3 | 493 | 36 | 527 | 2.07e-51 | 183 |
MS.gene066566.t1 | MTR_7g406870 | 28.297 | 417 | 279 | 7 | 89 | 489 | 1 | 413 | 1.02e-39 | 149 |
MS.gene066566.t1 | MTR_3g465910 | 87.179 | 78 | 9 | 1 | 354 | 431 | 459 | 535 | 5.49e-34 | 135 |
MS.gene066566.t1 | MTR_8g105970 | 31.757 | 296 | 175 | 9 | 162 | 451 | 75 | 349 | 5.51e-34 | 132 |
MS.gene066566.t1 | MTR_2g013540 | 26.190 | 378 | 262 | 8 | 127 | 490 | 1 | 375 | 7.51e-30 | 121 |
MS.gene066566.t1 | MTR_3g466600 | 88.235 | 51 | 6 | 0 | 404 | 454 | 1 | 51 | 3.83e-23 | 93.2 |
MS.gene066566.t1 | MTR_3g465900 | 86.957 | 46 | 5 | 1 | 456 | 500 | 1 | 46 | 2.00e-17 | 81.6 |
MS.gene066566.t1 | MTR_1g090140 | 24.094 | 552 | 320 | 20 | 3 | 498 | 54 | 562 | 6.83e-14 | 74.7 |
MS.gene066566.t1 | MTR_8g017080 | 23.585 | 530 | 318 | 17 | 3 | 482 | 55 | 547 | 3.05e-12 | 69.3 |
MS.gene066566.t1 | MTR_1g090130 | 22.794 | 544 | 337 | 18 | 3 | 498 | 54 | 562 | 3.66e-12 | 68.9 |
MS.gene066566.t1 | MTR_0991s0010 | 37.736 | 106 | 60 | 2 | 3 | 104 | 69 | 172 | 1.72e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066566.t1 | AT5G20890 | 88.800 | 500 | 56 | 0 | 1 | 500 | 28 | 527 | 0.0 | 889 |
MS.gene066566.t1 | AT3G11830 | 37.097 | 496 | 301 | 6 | 2 | 489 | 34 | 526 | 2.09e-95 | 300 |
MS.gene066566.t1 | AT3G20050 | 35.938 | 512 | 297 | 9 | 2 | 489 | 30 | 534 | 6.61e-95 | 298 |
MS.gene066566.t1 | AT3G11830 | 36.895 | 496 | 300 | 7 | 2 | 489 | 34 | 524 | 3.52e-93 | 294 |
MS.gene066566.t1 | AT3G18190 | 35.857 | 502 | 303 | 8 | 2 | 490 | 39 | 534 | 8.22e-89 | 282 |
MS.gene066566.t1 | AT1G24510 | 33.797 | 503 | 309 | 9 | 2 | 490 | 39 | 531 | 1.14e-81 | 263 |
MS.gene066566.t1 | AT1G24510 | 32.632 | 475 | 298 | 8 | 30 | 490 | 12 | 478 | 1.07e-71 | 236 |
MS.gene066566.t1 | AT1G24510 | 31.965 | 463 | 293 | 8 | 42 | 490 | 1 | 455 | 3.82e-66 | 221 |
MS.gene066566.t1 | AT3G02530 | 30.512 | 508 | 323 | 11 | 2 | 489 | 28 | 525 | 2.62e-62 | 213 |
MS.gene066566.t1 | AT5G16070 | 31.214 | 519 | 320 | 15 | 2 | 497 | 28 | 532 | 8.94e-62 | 211 |
MS.gene066566.t1 | AT5G26360 | 30.219 | 503 | 329 | 11 | 2 | 490 | 30 | 524 | 7.53e-57 | 198 |
MS.gene066566.t1 | AT3G03960 | 29.116 | 498 | 340 | 9 | 3 | 493 | 39 | 530 | 2.31e-51 | 183 |
MS.gene066566.t1 | AT2G33210 | 24.908 | 546 | 317 | 24 | 3 | 495 | 54 | 559 | 1.15e-16 | 83.2 |
MS.gene066566.t1 | AT3G23990 | 24.723 | 542 | 321 | 20 | 3 | 494 | 53 | 557 | 3.93e-16 | 81.6 |
MS.gene066566.t1 | AT2G33210 | 24.769 | 541 | 319 | 23 | 3 | 495 | 54 | 554 | 2.74e-15 | 79.0 |
Find 109 sgRNAs with CRISPR-Local
Find 321 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCTTTGCCATTACCATTTC+AGG | 0.181073 | 7.4:+3315215 | None:intergenic |
CTTGTCTTGTGAGAGAATTT+TGG | 0.234265 | 7.4:+3317946 | None:intergenic |
CTTTGCATTCTCTATGCGTT+TGG | 0.270372 | 7.4:+3316678 | None:intergenic |
TTTATTCTTGACAAGAAAAT+TGG | 0.289639 | 7.4:-3316712 | MS.gene066566:CDS |
GAGCGTTTGGCTCTGGTAAC+TGG | 0.312271 | 7.4:-3316403 | MS.gene066566:CDS |
CTCCAGGCTTCTTTATAATC+TGG | 0.321069 | 7.4:+3317002 | None:intergenic |
TCGTGTTCGTGTTGACTCTA+TGG | 0.326461 | 7.4:-3316602 | MS.gene066566:CDS |
TTTGCATTCTCTATGCGTTT+GGG | 0.352812 | 7.4:+3316679 | None:intergenic |
CAGCAGTACATCCCTCATTC+TGG | 0.365145 | 7.4:+3315045 | None:intergenic |
AGATGCTGTAATGAGATTAA+AGG | 0.378997 | 7.4:-3317900 | MS.gene066566:intron |
CATCCCATGACTATAATTGC+AGG | 0.379746 | 7.4:-3318255 | MS.gene066566:CDS |
GGCCATGGCTATTGCTGACT+TGG | 0.384996 | 7.4:-3318526 | None:intergenic |
GGTTGGAGACATGGTTGAAC+GGG | 0.390613 | 7.4:-3314437 | MS.gene066566:CDS |
ATTCTGTCTTCTCTCCTCCT+TGG | 0.391078 | 7.4:+3314316 | None:intergenic |
ATCCATTCCCTTTGGGCCTA+AGG | 0.391153 | 7.4:+3318494 | None:intergenic |
TTATGATATCATCAACTCTA+AGG | 0.402837 | 7.4:+3314347 | None:intergenic |
AGCAGGGTGTTGCTTGGAGG+CGG | 0.406361 | 7.4:-3315242 | MS.gene066566:CDS |
GCATTATCAGCAATGGTTGT+TGG | 0.407647 | 7.4:+3315113 | None:intergenic |
CATTGCTGATAATGCTGGTT+TGG | 0.419056 | 7.4:-3315105 | MS.gene066566:CDS |
AACTACCTCTGTTGTTGTAT+TGG | 0.419643 | 7.4:-3318325 | MS.gene066566:CDS |
CATAGAGAATGCAAAGATAC+TGG | 0.422234 | 7.4:-3316671 | MS.gene066566:CDS |
CTTATTGAAGAGATTATGAT+TGG | 0.428527 | 7.4:-3316322 | MS.gene066566:CDS |
TTCTGGTGTTGCAATGGGGC+AGG | 0.444806 | 7.4:-3316278 | MS.gene066566:CDS |
CTTCACCTTGTCTGTGTCCA+TGG | 0.445280 | 7.4:+3316636 | None:intergenic |
ACAGACAAGGTGAAGATATA+CGG | 0.446868 | 7.4:-3316628 | MS.gene066566:CDS |
TGGAGGCGGGTGGCCTGAAA+TGG | 0.452003 | 7.4:-3315228 | MS.gene066566:CDS |
GAGGAGCTCTTTGCTGATGC+GGG | 0.457731 | 7.4:-3316463 | MS.gene066566:CDS |
GCATCAGCAAAGAGCTCCTC+TGG | 0.457957 | 7.4:+3316466 | None:intergenic |
TAGTCCTTGCAATGTTCATC+AGG | 0.458776 | 7.4:+3317978 | None:intergenic |
ACAGTGCTGAGTTGATTTCT+CGG | 0.458993 | 7.4:-3315082 | MS.gene066566:CDS |
GCTGGAATTGATGTCATCTC+TGG | 0.462467 | 7.4:-3315026 | MS.gene066566:CDS |
GCAGGGTGTTGCTTGGAGGC+GGG | 0.468045 | 7.4:-3315241 | MS.gene066566:CDS |
ACCTCTGTTGTTGTATTGGC+TGG | 0.470611 | 7.4:-3318321 | MS.gene066566:CDS |
AACCCTGAGTCTGTTAAGCT+TGG | 0.475389 | 7.4:-3316355 | MS.gene066566:CDS |
CTCAGACTGTCAATGACAGC+AGG | 0.476182 | 7.4:-3315259 | MS.gene066566:CDS |
GCTAAAGTTGCTGAGATTGA+AGG | 0.478957 | 7.4:-3316580 | MS.gene066566:CDS |
TGCCCAAGCTTAACAGACTC+AGG | 0.481251 | 7.4:+3316352 | None:intergenic |
GGCAAAGGAAATTGATGCAT+TGG | 0.483080 | 7.4:-3315201 | MS.gene066566:CDS |
CAGAATGAGGGATGTACTGC+TGG | 0.484170 | 7.4:-3315044 | MS.gene066566:CDS |
GAAGGAGAAAATGAAAGAAA+AGG | 0.485024 | 7.4:-3316551 | MS.gene066566:CDS |
AAAGTTCAAGATGATGAAGT+TGG | 0.486158 | 7.4:-3318354 | MS.gene066566:CDS |
CCGCGCTGAGCACCAGAATG+AGG | 0.489347 | 7.4:-3315057 | MS.gene066566:CDS |
GAAAAGGTGAACAAGATCAT+AGG | 0.494619 | 7.4:-3316535 | MS.gene066566:CDS |
TACCTTAGGCCCAAAGGGAA+TGG | 0.504259 | 7.4:-3318496 | MS.gene066566:CDS |
ACCCTGAGTCTGTTAAGCTT+GGG | 0.506927 | 7.4:-3316354 | MS.gene066566:CDS |
TGGTATTGAGCGTTTGGCTC+TGG | 0.508693 | 7.4:-3316410 | MS.gene066566:CDS |
CTTGACAAGAAAATTGGTCT+CGG | 0.509152 | 7.4:-3316706 | MS.gene066566:CDS |
GAAACCTGCAATTATAGTCA+TGG | 0.510564 | 7.4:+3318251 | None:intergenic |
GGCATCATGCAATGACCTCT+CGG | 0.511037 | 7.4:+3315295 | None:intergenic |
GTCCAGATTATAAAGAAGCC+TGG | 0.511659 | 7.4:-3317004 | MS.gene066566:CDS |
CATTAGTGACAGTAACTTCA+CGG | 0.513830 | 7.4:+3318445 | None:intergenic |
TGAGTGTGCTCGTAGTGCTT+TGG | 0.514026 | 7.4:-3318217 | MS.gene066566:CDS |
TCGACGAGGACTTTAGCAGC+TGG | 0.514395 | 7.4:+3318384 | None:intergenic |
ACAACCATTGCTGATAATGC+TGG | 0.517593 | 7.4:-3315110 | MS.gene066566:CDS |
AGGAAATTGATGCATTGGCC+AGG | 0.519392 | 7.4:-3315196 | MS.gene066566:CDS |
GACAGCAGGGTGTTGCTTGG+AGG | 0.524224 | 7.4:-3315245 | MS.gene066566:CDS |
CGCGCTGAGCACCAGAATGA+GGG | 0.529599 | 7.4:-3315056 | MS.gene066566:CDS |
GAGCACACTCAGCCGCCATT+CGG | 0.530966 | 7.4:+3318229 | None:intergenic |
CTTCTGGTAGGTTGGAGACA+TGG | 0.533014 | 7.4:-3314446 | MS.gene066566:intron |
GACTTGGTTAAGACTACCTT+AGG | 0.535018 | 7.4:-3318510 | MS.gene066566:CDS |
CGGGTGGCCTGAAATGGTAA+TGG | 0.539649 | 7.4:-3315222 | MS.gene066566:CDS |
GGGTGTTGCTTGGAGGCGGG+TGG | 0.542712 | 7.4:-3315238 | MS.gene066566:CDS |
TGAAGCATTCAAAGTCAAGC+AGG | 0.543590 | 7.4:-3314407 | MS.gene066566:CDS |
CGACGAGGACTTTAGCAGCT+GGG | 0.549343 | 7.4:+3318385 | None:intergenic |
TGTATTGCTATCTGCAACAG+AGG | 0.550363 | 7.4:-3314383 | MS.gene066566:CDS |
AAGACTACCTTAGGCCCAAA+GGG | 0.550690 | 7.4:-3318501 | MS.gene066566:CDS |
AATGACAGCAGGGTGTTGCT+TGG | 0.551264 | 7.4:-3315248 | MS.gene066566:CDS |
AGAGGAGCTCTTTGCTGATG+CGG | 0.551374 | 7.4:-3316464 | MS.gene066566:CDS |
TGAGATTGAAGGAGCCGAGA+AGG | 0.556086 | 7.4:-3316569 | MS.gene066566:CDS |
TGCTTTGGTAGAGAAGGTTG+TGG | 0.556420 | 7.4:-3318202 | MS.gene066566:CDS |
GTGGACAACAAAGGAGATGC+TGG | 0.557280 | 7.4:-3318183 | MS.gene066566:intron |
AGCTGGGTTATCAATGTGAA+GGG | 0.569702 | 7.4:+3318401 | None:intergenic |
CAAGATGATGAAGTTGGCGA+TGG | 0.570613 | 7.4:-3318348 | MS.gene066566:CDS |
TCGTAGTGCTTTGGTAGAGA+AGG | 0.572237 | 7.4:-3318208 | MS.gene066566:CDS |
AAACCTGCAATTATAGTCAT+GGG | 0.572960 | 7.4:+3318252 | None:intergenic |
GCCTGAAATGGTAATGGCAA+AGG | 0.576296 | 7.4:-3315216 | MS.gene066566:CDS |
CAGCTGGGTTATCAATGTGA+AGG | 0.577404 | 7.4:+3318400 | None:intergenic |
TGAAGAGATTATGATTGGTG+AGG | 0.578048 | 7.4:-3316317 | MS.gene066566:CDS |
AACAGACTCAGGGTTGTCAA+AGG | 0.580150 | 7.4:+3316363 | None:intergenic |
GAGTCTATCAGTGATCCTCC+AGG | 0.581503 | 7.4:+3316986 | None:intergenic |
CAAAATTCTCTCACAAGACA+AGG | 0.582057 | 7.4:-3317945 | MS.gene066566:CDS |
GCATTGGCCAGGAAAACTCC+AGG | 0.585369 | 7.4:-3315185 | MS.gene066566:CDS |
AGGTTGGAGACATGGTTGAA+CGG | 0.592539 | 7.4:-3314438 | MS.gene066566:CDS |
GTGAACAAGATCATAGGTCA+TGG | 0.596754 | 7.4:-3316529 | MS.gene066566:CDS |
TAAGACTACCTTAGGCCCAA+AGG | 0.597137 | 7.4:-3318502 | MS.gene066566:CDS |
GAAGTTACTGTCACTAATGA+CGG | 0.601731 | 7.4:-3318441 | MS.gene066566:CDS |
ATATCATAACTTGTGCTCCA+AGG | 0.603826 | 7.4:-3314333 | MS.gene066566:CDS |
CAAACCAGCATTATCAGCAA+TGG | 0.610258 | 7.4:+3315106 | None:intergenic |
CACTGCCATGGACACAGACA+AGG | 0.617081 | 7.4:-3316641 | MS.gene066566:CDS |
ACTGGTTGCAAACACTGCCA+TGG | 0.617479 | 7.4:-3316653 | MS.gene066566:CDS |
AATTGCAGGTTTCCGAATGG+CGG | 0.618540 | 7.4:-3318241 | MS.gene066566:CDS |
GTTGGAGACATGGTTGAACG+GGG | 0.628503 | 7.4:-3314436 | MS.gene066566:CDS |
CAGACCTGATGAACATTGCA+AGG | 0.630815 | 7.4:-3317982 | MS.gene066566:CDS |
AACCAAGTCAGCAATAGCCA+TGG | 0.632695 | 7.4:+3318524 | None:intergenic |
GAGAAGGTTGTGGACAACAA+AGG | 0.635725 | 7.4:-3318192 | MS.gene066566:CDS |
GCCCAAGCTTAACAGACTCA+GGG | 0.636349 | 7.4:+3316353 | None:intergenic |
TATAATTGCAGGTTTCCGAA+TGG | 0.638845 | 7.4:-3318244 | MS.gene066566:CDS |
TCAGACTGTCAATGACAGCA+GGG | 0.640090 | 7.4:-3315258 | MS.gene066566:CDS |
TCTCGGCTTCATCAAGAACA+TGG | 0.640574 | 7.4:+3315312 | None:intergenic |
CCTCATTCTGGTGCTCAGCG+CGG | 0.652189 | 7.4:+3315057 | None:intergenic |
CGTTTGGCTCTGGTAACTGG+TGG | 0.662358 | 7.4:-3316400 | MS.gene066566:CDS |
CGGCTTCATCAAGAACATGG+TGG | 0.674569 | 7.4:+3315315 | None:intergenic |
TTGGAGACATGGTTGAACGG+GGG | 0.675738 | 7.4:-3314435 | MS.gene066566:CDS |
TCATAACTTGTGCTCCAAGG+AGG | 0.689519 | 7.4:-3314330 | MS.gene066566:CDS |
AGTCTGAGATAGCACACACA+AGG | 0.707210 | 7.4:+3315274 | None:intergenic |
GCCAGCCAATACAACAACAG+AGG | 0.723732 | 7.4:+3318320 | None:intergenic |
ATGTTCTTGATGAAGCCGAG+AGG | 0.725787 | 7.4:-3315310 | MS.gene066566:CDS |
CAGATTATAAAGAAGCCTGG+AGG | 0.728244 | 7.4:-3317001 | MS.gene066566:CDS |
GAACTTTAGAAATGTCGACG+AGG | 0.762938 | 7.4:+3318370 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | GGTTTTTTTTTTTTTTTTTT+TGG | - | chr7.4:3316739-3316758 | MS.gene066566:intron | 10.0% |
!!! | TTTTATTTTATTTAGAAGTT+TGG | - | chr7.4:3315359-3315378 | MS.gene066566:intron | 10.0% |
!!! | TTTTTTTTTTTTTTTTTTGG+GGG | - | chr7.4:3316742-3316761 | MS.gene066566:intron | 10.0% |
!! | TTTATTAAAGGTTAATGTAT+AGG | - | chr7.4:3317156-3317175 | MS.gene066566:intron | 15.0% |
!!! | AATTTCCTTTTTTAAATTAC+AGG | - | chr7.4:3315787-3315806 | MS.gene066566:intron | 15.0% |
!!! | ATTTCCTTTTTTAAATTACA+GGG | - | chr7.4:3315788-3315807 | MS.gene066566:intron | 15.0% |
!!! | CAAATTTGTAACTAATTTTT+GGG | + | chr7.4:3315295-3315314 | None:intergenic | 15.0% |
!!! | TCAAATTTGTAACTAATTTT+TGG | + | chr7.4:3315296-3315315 | None:intergenic | 15.0% |
!!! | TGTTTTTTAACAAATTTGAT+GGG | - | chr7.4:3317449-3317468 | MS.gene066566:intron | 15.0% |
!!! | TTTTTTTTTTTTTTTTTGGG+GGG | - | chr7.4:3316743-3316762 | MS.gene066566:intron | 15.0% |
!! | ATAATAATAGAGATCACTAT+GGG | + | chr7.4:3315738-3315757 | None:intergenic | 20.0% |
!! | ATGTAAATAGTTCATTATAC+AGG | + | chr7.4:3316045-3316064 | None:intergenic | 20.0% |
!! | TCATGATATTAGTATTTCAT+AGG | - | chr7.4:3317089-3317108 | MS.gene066566:intron | 20.0% |
!! | TTCTAAATTGGATTATACTT+TGG | - | chr7.4:3316093-3316112 | MS.gene066566:intron | 20.0% |
!! | TTTATTCTTGACAAGAAAAT+TGG | - | chr7.4:3316122-3316141 | MS.gene066566:intron | 20.0% |
!!! | AAAAACTGTTTTTTAAGGAT+TGG | + | chr7.4:3315457-3315476 | None:intergenic | 20.0% |
!!! | AAAAATGATCTGAAGTTATA+TGG | + | chr7.4:3316685-3316704 | None:intergenic | 20.0% |
!!! | AAAAGTATTCACTGAAATAA+CGG | - | chr7.4:3315531-3315550 | MS.gene066566:intron | 20.0% |
!!! | ACTCAAAAAACTGTTTTTTA+AGG | + | chr7.4:3315462-3315481 | None:intergenic | 20.0% |
!!! | ATTTCAGTGAATACTTTTTA+TGG | + | chr7.4:3315529-3315548 | None:intergenic | 20.0% |
!!! | CTGTTTTTTAACAAATTTGA+TGG | - | chr7.4:3317448-3317467 | MS.gene066566:intron | 20.0% |
!!! | GATAAATTGATTAAGTTTTC+TGG | - | chr7.4:3316539-3316558 | MS.gene066566:CDS | 20.0% |
!!! | TAAGTTTGTATTTTGTTTCA+TGG | - | chr7.4:3318022-3318041 | MS.gene066566:intron | 20.0% |
!!! | TAATATCTCTGTTTCTAAAT+TGG | - | chr7.4:3316081-3316100 | MS.gene066566:intron | 20.0% |
!!! | TCTATCTTTTTTTAAATCCT+GGG | - | chr7.4:3315940-3315959 | MS.gene066566:intron | 20.0% |
!!! | TTCTATCTTTTTTTAAATCC+TGG | - | chr7.4:3315939-3315958 | MS.gene066566:intron | 20.0% |
!!! | TTTTTTTTTTTGACAAATGC+TGG | - | chr7.4:3317283-3317302 | MS.gene066566:intron | 20.0% |
! | AAGACAAACAGAAAATGTAA+TGG | + | chr7.4:3318347-3318366 | None:intergenic | 25.0% |
! | AGAACTGAAACTGAATAAAA+GGG | + | chr7.4:3317134-3317153 | None:intergenic | 25.0% |
! | ATTAAGTCCAATGATTTAAC+TGG | - | chr7.4:3317240-3317259 | MS.gene066566:intron | 25.0% |
! | ATTTAAAAAATCCAACACAC+AGG | - | chr7.4:3316831-3316850 | MS.gene066566:intron | 25.0% |
! | CATAATAATAGAGATCACTA+TGG | + | chr7.4:3315739-3315758 | None:intergenic | 25.0% |
! | CTTATTGAAGAGATTATGAT+TGG | - | chr7.4:3316512-3316531 | MS.gene066566:CDS | 25.0% |
! | GATACTCAAACTAAAAAATG+TGG | + | chr7.4:3315908-3315927 | None:intergenic | 25.0% |
! | TATAGCAGTATTTCATTTGT+GGG | - | chr7.4:3315582-3315601 | MS.gene066566:intron | 25.0% |
! | TGGAAAAAATAGAAGACATT+GGG | + | chr7.4:3316961-3316980 | None:intergenic | 25.0% |
! | TTATACTCACATCATAAGAA+TGG | + | chr7.4:3315419-3315438 | None:intergenic | 25.0% |
! | TTATAGCAGTATTTCATTTG+TGG | - | chr7.4:3315581-3315600 | MS.gene066566:intron | 25.0% |
! | TTATGATATCATCAACTCTA+AGG | + | chr7.4:3318490-3318509 | None:intergenic | 25.0% |
! | TTCTACCAAGAAAAAGATTA+TGG | + | chr7.4:3317915-3317934 | None:intergenic | 25.0% |
!! | AAAATTTTATCCATTCCCTT+TGG | + | chr7.4:3314351-3314370 | None:intergenic | 25.0% |
!! | AAAGTATTCACTGAAATAAC+GGG | - | chr7.4:3315532-3315551 | MS.gene066566:intron | 25.0% |
!! | AAATCCTCCAATACAATTTT+TGG | - | chr7.4:3316865-3316884 | MS.gene066566:intron | 25.0% |
!! | AAATTTTATCCATTCCCTTT+GGG | + | chr7.4:3314350-3314369 | None:intergenic | 25.0% |
!! | AATCCTCCAATACAATTTTT+GGG | - | chr7.4:3316866-3316885 | MS.gene066566:intron | 25.0% |
!! | AGTTTATTCAAGTTACTTGA+AGG | + | chr7.4:3315997-3316016 | None:intergenic | 25.0% |
!! | GTTCAACTAGGTTATATTTT+TGG | - | chr7.4:3315554-3315573 | MS.gene066566:intron | 25.0% |
!! | TCATTCCATAATCTTTTTCT+TGG | - | chr7.4:3317907-3317926 | MS.gene066566:CDS | 25.0% |
!! | TGAACTATTTACATTAGTCT+TGG | - | chr7.4:3316051-3316070 | MS.gene066566:intron | 25.0% |
!! | TGTGTACTTTTAAACCATTA+GGG | + | chr7.4:3315626-3315645 | None:intergenic | 25.0% |
!! | TTGTGTACTTTTAAACCATT+AGG | + | chr7.4:3315627-3315646 | None:intergenic | 25.0% |
!! | TTTAAAAGTACACAATGTTC+TGG | - | chr7.4:3315632-3315651 | MS.gene066566:intron | 25.0% |
!!! | AAGAATGGATTATAAACTAC+AGG | + | chr7.4:3315404-3315423 | None:intergenic | 25.0% |
!!! | ATAGACTCATTTTTAGATGA+AGG | - | chr7.4:3315863-3315882 | MS.gene066566:intron | 25.0% |
!!! | CTATCTTTTTTTAAATCCTG+GGG | - | chr7.4:3315941-3315960 | MS.gene066566:intron | 25.0% |
!!! | CTTCAGATCATTTTTCTTTT+AGG | - | chr7.4:3316690-3316709 | MS.gene066566:CDS | 25.0% |
!!! | TAATACAGAGTTCCATTTTT+GGG | - | chr7.4:3314976-3314995 | MS.gene066566:intron | 25.0% |
!!! | TAGACTCATTTTTAGATGAA+GGG | - | chr7.4:3315864-3315883 | MS.gene066566:intron | 25.0% |
!!! | TTATCATTTTGTTTACAGCA+TGG | - | chr7.4:3314759-3314778 | MS.gene066566:intron | 25.0% |
!!! | TTTCAGTTCTGGTTTATTAA+AGG | - | chr7.4:3317144-3317163 | MS.gene066566:intron | 25.0% |
!!! | TTTTTCTTTTAGGCTTTGTT+TGG | - | chr7.4:3316700-3316719 | MS.gene066566:CDS | 25.0% |
!!! | TTTTTTTTTTTCCTGTGTGT+TGG | + | chr7.4:3316845-3316864 | None:intergenic | 25.0% |
AAAAAATAGAAGACATTGGG+AGG | + | chr7.4:3316958-3316977 | None:intergenic | 30.0% | |
AAACCTGCAATTATAGTCAT+GGG | + | chr7.4:3314585-3314604 | None:intergenic | 30.0% | |
AAAGTTCAAGATGATGAAGT+TGG | - | chr7.4:3314480-3314499 | MS.gene066566:intron | 30.0% | |
AAATGGAACTCTGTATTAGT+AGG | + | chr7.4:3314974-3314993 | None:intergenic | 30.0% | |
AATACAAAATCCCTCTCATT+AGG | + | chr7.4:3316897-3316916 | None:intergenic | 30.0% | |
AATGGAACTCTGTATTAGTA+GGG | + | chr7.4:3314973-3314992 | None:intergenic | 30.0% | |
ACTGACTGAAGCATAATAAA+TGG | + | chr7.4:3317379-3317398 | None:intergenic | 30.0% | |
AGATGCTGTAATGAGATTAA+AGG | - | chr7.4:3314934-3314953 | MS.gene066566:intron | 30.0% | |
AGGATTGGAAAGAAATTGAA+AGG | + | chr7.4:3315442-3315461 | None:intergenic | 30.0% | |
ATACAAAATCCCTCTCATTA+GGG | + | chr7.4:3316896-3316915 | None:intergenic | 30.0% | |
ATAGCAGTATTTCATTTGTG+GGG | - | chr7.4:3315583-3315602 | MS.gene066566:intron | 30.0% | |
ATAGTTCATTATACAGGTAG+TGG | + | chr7.4:3316039-3316058 | None:intergenic | 30.0% | |
ATCTTATGCATGAACTTACT+TGG | - | chr7.4:3314809-3314828 | MS.gene066566:intron | 30.0% | |
ATGGTAAAACCTAATCCAAA+AGG | + | chr7.4:3314704-3314723 | None:intergenic | 30.0% | |
ATTAGCTAAATCCCCAAAAA+TGG | + | chr7.4:3314991-3315010 | None:intergenic | 30.0% | |
CAGAACTGAAACTGAATAAA+AGG | + | chr7.4:3317135-3317154 | None:intergenic | 30.0% | |
CATCTCATATTATTCAATGC+GGG | + | chr7.4:3318138-3318157 | None:intergenic | 30.0% | |
CTGAAGCATAATAAATGGTA+AGG | + | chr7.4:3317374-3317393 | None:intergenic | 30.0% | |
GAAAAAAAAATCCTGATGCA+TGG | + | chr7.4:3315712-3315731 | None:intergenic | 30.0% | |
GAAGGAGAAAATGAAAGAAA+AGG | - | chr7.4:3316283-3316302 | MS.gene066566:CDS | 30.0% | |
GAATAATATGAGATGCTTGA+TGG | - | chr7.4:3318143-3318162 | MS.gene066566:intron | 30.0% | |
GCATCTCATATTATTCAATG+CGG | + | chr7.4:3318139-3318158 | None:intergenic | 30.0% | |
GCTTCCCTGTAATTTAAAAA+AGG | + | chr7.4:3315795-3315814 | None:intergenic | 30.0% | |
GTGGAAAAAATAGAAGACAT+TGG | + | chr7.4:3316962-3316981 | None:intergenic | 30.0% | |
TAAAATAAGTCGATCCAAAC+AGG | - | chr7.4:3315269-3315288 | MS.gene066566:CDS | 30.0% | |
TATGTAAAAGAACGTCAGAA+AGG | + | chr7.4:3316640-3316659 | None:intergenic | 30.0% | |
TGCTAGAATAAGAAAACCTT+AGG | + | chr7.4:3317040-3317059 | None:intergenic | 30.0% | |
TTTAAACCATTAGGGAGAAA+AGG | + | chr7.4:3315618-3315637 | None:intergenic | 30.0% | |
TTTGTCTTATATACTTCGAC+CGG | - | chr7.4:3318359-3318378 | MS.gene066566:CDS | 30.0% | |
! | ATATACTTTTCTGCATGCTT+TGG | - | chr7.4:3315319-3315338 | MS.gene066566:intron | 30.0% |
! | ATTGATCTACAATTTTCCAG+AGG | - | chr7.4:3316352-3316371 | MS.gene066566:CDS | 30.0% |
! | CTAATACAGAGTTCCATTTT+TGG | - | chr7.4:3314975-3314994 | MS.gene066566:intron | 30.0% |
! | CTTTTATTCAGTTTCAGTTC+TGG | - | chr7.4:3317133-3317152 | MS.gene066566:intron | 30.0% |
! | GACGTTCTTTTACATATTCA+GGG | - | chr7.4:3316644-3316663 | MS.gene066566:CDS | 30.0% |
! | GATAAAATTTTGCAGTCAAC+AGG | - | chr7.4:3314360-3314379 | MS.gene066566:CDS | 30.0% |
! | TGACGTTCTTTTACATATTC+AGG | - | chr7.4:3316643-3316662 | MS.gene066566:CDS | 30.0% |
! | TTCTTTCATTTTCTCCTTCT+CGG | + | chr7.4:3316282-3316301 | None:intergenic | 30.0% |
!! | AATACAGAGTTCCATTTTTG+GGG | - | chr7.4:3314977-3314996 | MS.gene066566:intron | 30.0% |
!! | TACTTTTTATGGAGCATTCA+AGG | + | chr7.4:3315518-3315537 | None:intergenic | 30.0% |
!! | TCTTTTGTATTGAGTTGCAT+AGG | - | chr7.4:3315968-3315987 | MS.gene066566:intron | 30.0% |
!! | TTTGGATTAGGTTTTACCAT+TGG | - | chr7.4:3314704-3314723 | MS.gene066566:intron | 30.0% |
!!! | AACTAGGTTATATTTTTGGC+AGG | - | chr7.4:3315558-3315577 | MS.gene066566:intron | 30.0% |
!!! | ATTGAACATGCTGATTTTGA+TGG | - | chr7.4:3316404-3316423 | MS.gene066566:CDS | 30.0% |
!!! | TTTTTTTTTTTTTTGGGGGG+CGG | - | chr7.4:3316746-3316765 | MS.gene066566:intron | 30.0% |
AAAAAAGTCTCTTGCAATGG+AGG | - | chr7.4:3317672-3317691 | MS.gene066566:intron | 35.0% | |
AACTACCTCTGTTGTTGTAT+TGG | - | chr7.4:3314509-3314528 | MS.gene066566:intron | 35.0% | |
ACAGACAAGGTGAAGATATA+CGG | - | chr7.4:3316206-3316225 | MS.gene066566:intron | 35.0% | |
AGGAAAAAAGTCTCTTGCAA+TGG | - | chr7.4:3317669-3317688 | MS.gene066566:intron | 35.0% | |
ATAATAAATGGTAAGGAGCG+GGG | + | chr7.4:3317367-3317386 | None:intergenic | 35.0% | |
ATTTATCCATAAGCTTGTCG+AGG | - | chr7.4:3315141-3315160 | MS.gene066566:CDS | 35.0% | |
CAAAATTCTCTCACAAGACA+AGG | - | chr7.4:3314889-3314908 | MS.gene066566:intron | 35.0% | |
CAATACAAAAGAAAAACCCC+AGG | + | chr7.4:3315960-3315979 | None:intergenic | 35.0% | |
CATAATAAATGGTAAGGAGC+GGG | + | chr7.4:3317368-3317387 | None:intergenic | 35.0% | |
CATACACTATGGAGAAATCA+TGG | + | chr7.4:3315030-3315049 | None:intergenic | 35.0% | |
CATAGAGAATGCAAAGATAC+TGG | - | chr7.4:3316163-3316182 | MS.gene066566:intron | 35.0% | |
CATTAGTGACAGTAACTTCA+CGG | + | chr7.4:3314392-3314411 | None:intergenic | 35.0% | |
CCAAAAGGAAACATGCAAAA+AGG | + | chr7.4:3314689-3314708 | None:intergenic | 35.0% | |
GAAAAGGTGAACAAGATCAT+AGG | - | chr7.4:3316299-3316318 | MS.gene066566:CDS | 35.0% | |
GAAACCTGCAATTATAGTCA+TGG | + | chr7.4:3314586-3314605 | None:intergenic | 35.0% | |
GAACCCAAAAATTGTATTGG+AGG | + | chr7.4:3316872-3316891 | None:intergenic | 35.0% | |
GAAGTTACTGTCACTAATGA+CGG | - | chr7.4:3314393-3314412 | MS.gene066566:CDS | 35.0% | |
GAGTTAGGATGTGTATGATA+GGG | - | chr7.4:3318086-3318105 | MS.gene066566:intron | 35.0% | |
GCATAATAAATGGTAAGGAG+CGG | + | chr7.4:3317369-3317388 | None:intergenic | 35.0% | |
TACAAAATCCCTCTCATTAG+GGG | + | chr7.4:3316895-3316914 | None:intergenic | 35.0% | |
TATAATTGCAGGTTTCCGAA+TGG | - | chr7.4:3314590-3314609 | MS.gene066566:intron | 35.0% | |
TATTATTCAATGCGGGACTT+AGG | + | chr7.4:3318131-3318150 | None:intergenic | 35.0% | |
TCCAACTGTGGAAAAACTAT+TGG | - | chr7.4:3315076-3315095 | MS.gene066566:CDS | 35.0% | |
TGAAGAGATTATGATTGGTG+AGG | - | chr7.4:3316517-3316536 | MS.gene066566:CDS | 35.0% | |
TTTGACAAATGCTGGAATGT+TGG | - | chr7.4:3317291-3317310 | MS.gene066566:intron | 35.0% | |
TTTGCATTCTCTATGCGTTT+GGG | + | chr7.4:3316158-3316177 | None:intergenic | 35.0% | |
! | AACAAAGTATTCAGAGCCAA+TGG | + | chr7.4:3314723-3314742 | None:intergenic | 35.0% |
! | ATATCATAACTTGTGCTCCA+AGG | - | chr7.4:3318501-3318520 | MS.gene066566:CDS | 35.0% |
! | CCTTTTTGCATGTTTCCTTT+TGG | - | chr7.4:3314686-3314705 | MS.gene066566:intron | 35.0% |
! | CTCATGACAACCAGATTTTA+AGG | - | chr7.4:3318197-3318216 | MS.gene066566:CDS | 35.0% |
! | CTTGACAAGAAAATTGGTCT+CGG | - | chr7.4:3316128-3316147 | MS.gene066566:intron | 35.0% |
! | CTTGTCTTGTGAGAGAATTT+TGG | + | chr7.4:3314891-3314910 | None:intergenic | 35.0% |
! | GTTTTTCCTTTTCTCCCTAA+TGG | - | chr7.4:3315609-3315628 | MS.gene066566:intron | 35.0% |
! | TGCATGTTTCCTTTTGGATT+AGG | - | chr7.4:3314692-3314711 | MS.gene066566:intron | 35.0% |
! | TTTTTGTACTTCTGTGCTAG+CGG | - | chr7.4:3315681-3315700 | MS.gene066566:intron | 35.0% |
!! | AACTAATTTTTGGGCCTGTT+TGG | + | chr7.4:3315286-3315305 | None:intergenic | 35.0% |
!! | AGAAAACCTTAGGCTTTGTT+TGG | + | chr7.4:3317030-3317049 | None:intergenic | 35.0% |
!! | GAAAACCTTAGGCTTTGTTT+GGG | + | chr7.4:3317029-3317048 | None:intergenic | 35.0% |
!! | TTTTGATGGTATTGAGCGTT+TGG | - | chr7.4:3316418-3316437 | MS.gene066566:CDS | 35.0% |
!!! | AAGTTTTCTGGTGTTGCAAT+GGG | - | chr7.4:3316551-3316570 | MS.gene066566:CDS | 35.0% |
!!! | ATTGCAAGAGACTTTTTTCC+TGG | + | chr7.4:3317670-3317689 | None:intergenic | 35.0% |
!!! | CTTTTAGGCTTTGTTTGGAA+GGG | - | chr7.4:3316705-3316724 | MS.gene066566:CDS | 35.0% |
!!! | GCATGTACAATAGTTTTGAG+AGG | - | chr7.4:3316578-3316597 | MS.gene066566:CDS | 35.0% |
!!! | TAAGTTTTCTGGTGTTGCAA+TGG | - | chr7.4:3316550-3316569 | MS.gene066566:CDS | 35.0% |
!!! | TCTTTTAGGCTTTGTTTGGA+AGG | - | chr7.4:3316704-3316723 | MS.gene066566:CDS | 35.0% |
!!! | TTGGTTTTGCAGAGAAATTC+AGG | - | chr7.4:3314828-3314847 | MS.gene066566:intron | 35.0% |
!!! | TTTTTTTTTTTTTGGGGGGC+GGG | - | chr7.4:3316747-3316766 | MS.gene066566:intron | 35.0% |
AAAAATCCTGATGCATGGCT+AGG | + | chr7.4:3315707-3315726 | None:intergenic | 40.0% | |
AAACTACCTCGACAAGCTTA+TGG | + | chr7.4:3315150-3315169 | None:intergenic | 40.0% | |
AAACTCCCAAACAAAGCCTA+AGG | - | chr7.4:3317021-3317040 | MS.gene066566:CDS | 40.0% | |
ACAAAATCCCTCTCATTAGG+GGG | + | chr7.4:3316894-3316913 | None:intergenic | 40.0% | |
AGAGGAGGGTTTAGGAAAAT+AGG | + | chr7.4:3316994-3317013 | None:intergenic | 40.0% | |
AGCGGGGCAACATAAATATA+AGG | + | chr7.4:3317351-3317370 | None:intergenic | 40.0% | |
AGCTGGGTTATCAATGTGAA+GGG | + | chr7.4:3314436-3314455 | None:intergenic | 40.0% | |
ATAGGGACTTTGGTATCATG+CGG | - | chr7.4:3318103-3318122 | MS.gene066566:intron | 40.0% | |
CAAACCAGCATTATCAGCAA+TGG | + | chr7.4:3317731-3317750 | None:intergenic | 40.0% | |
CAGATTATAAAGAAGCCTGG+AGG | - | chr7.4:3315833-3315852 | MS.gene066566:intron | 40.0% | |
CAGCAGTCCAGTTAAATCAT+TGG | + | chr7.4:3317250-3317269 | None:intergenic | 40.0% | |
CAGTATTTCATTTGTGGGGA+TGG | - | chr7.4:3315587-3315606 | MS.gene066566:intron | 40.0% | |
CATCCCATGACTATAATTGC+AGG | - | chr7.4:3314579-3314598 | MS.gene066566:intron | 40.0% | |
CTCAAGCACTCCTTAAAATC+TGG | + | chr7.4:3318210-3318229 | None:intergenic | 40.0% | |
CTCCAGGCTTCTTTATAATC+TGG | + | chr7.4:3315835-3315854 | None:intergenic | 40.0% | |
CTTTGCATTCTCTATGCGTT+TGG | + | chr7.4:3316159-3316178 | None:intergenic | 40.0% | |
GAGGGTTTAGGAAAATAGGA+AGG | + | chr7.4:3316990-3317009 | None:intergenic | 40.0% | |
GATGTGTATGATAGGGACTT+TGG | - | chr7.4:3318093-3318112 | MS.gene066566:intron | 40.0% | |
GCATTATCAGCAATGGTTGT+TGG | + | chr7.4:3317724-3317743 | None:intergenic | 40.0% | |
GCGGGGCAACATAAATATAA+GGG | + | chr7.4:3317350-3317369 | None:intergenic | 40.0% | |
GCTAAAGTTGCTGAGATTGA+AGG | - | chr7.4:3316254-3316273 | MS.gene066566:CDS | 40.0% | |
GCTGTCTACTGATACATACA+AGG | + | chr7.4:3317429-3317448 | None:intergenic | 40.0% | |
GGAGTTAGGATGTGTATGAT+AGG | - | chr7.4:3318085-3318104 | MS.gene066566:intron | 40.0% | |
GGCAAAGGAAATTGATGCAT+TGG | - | chr7.4:3317633-3317652 | MS.gene066566:intron | 40.0% | |
GGGGAACCCAAAAATTGTAT+TGG | + | chr7.4:3316875-3316894 | None:intergenic | 40.0% | |
GTACACAACAGATAATTGCG+TGG | - | chr7.4:3317839-3317858 | MS.gene066566:intron | 40.0% | |
GTCCAGATTATAAAGAAGCC+TGG | - | chr7.4:3315830-3315849 | MS.gene066566:intron | 40.0% | |
GTGAACAAGATCATAGGTCA+TGG | - | chr7.4:3316305-3316324 | MS.gene066566:CDS | 40.0% | |
TAACTCCACCATGTTCACTA+GGG | + | chr7.4:3318072-3318091 | None:intergenic | 40.0% | |
TAACTGGACTGCTGAAATGT+TGG | - | chr7.4:3317256-3317275 | MS.gene066566:intron | 40.0% | |
TAGTCCTTGCAATGTTCATC+AGG | + | chr7.4:3314859-3314878 | None:intergenic | 40.0% | |
TCCATACATGTACCACTCAA+AGG | + | chr7.4:3317403-3317422 | None:intergenic | 40.0% | |
TCCTTTGCCATTACCATTTC+AGG | + | chr7.4:3317622-3317641 | None:intergenic | 40.0% | |
TGGCAACAATGCATACACTA+TGG | + | chr7.4:3315041-3315060 | None:intergenic | 40.0% | |
TGTATTGCTATCTGCAACAG+AGG | - | chr7.4:3318451-3318470 | MS.gene066566:CDS | 40.0% | |
TTGGACCAATGGAGAAAACA+TGG | + | chr7.4:3315061-3315080 | None:intergenic | 40.0% | |
! | ACAACCATTGCTGATAATGC+TGG | - | chr7.4:3317724-3317743 | MS.gene066566:intron | 40.0% |
! | ATTGGCTGGCGAACTTTTAA+GGG | - | chr7.4:3314527-3314546 | MS.gene066566:intron | 40.0% |
! | ATTTTGCAGTCAACAGGTAG+AGG | - | chr7.4:3314366-3314385 | MS.gene066566:CDS | 40.0% |
! | CATTGCTGATAATGCTGGTT+TGG | - | chr7.4:3317729-3317748 | MS.gene066566:intron | 40.0% |
! | GAACTTTAGAAATGTCGACG+AGG | + | chr7.4:3314467-3314486 | None:intergenic | 40.0% |
! | GACTTGGTTAAGACTACCTT+AGG | - | chr7.4:3314324-3314343 | MS.gene066566:CDS | 40.0% |
! | GCCAATAGTTTTTCCACAGT+TGG | + | chr7.4:3315080-3315099 | None:intergenic | 40.0% |
! | TATACAGGTAGTGGTGAAGT+TGG | + | chr7.4:3316030-3316049 | None:intergenic | 40.0% |
! | TGAAGCATTCAAAGTCAAGC+AGG | - | chr7.4:3318427-3318446 | MS.gene066566:CDS | 40.0% |
! | TGTTGCCATGTTTTCTCCAT+TGG | - | chr7.4:3315053-3315072 | MS.gene066566:CDS | 40.0% |
! | TTTTTCCACAGTTGGACCAA+TGG | + | chr7.4:3315072-3315091 | None:intergenic | 40.0% |
!! | ACAGTGCTGAGTTGATTTCT+CGG | - | chr7.4:3317752-3317771 | MS.gene066566:intron | 40.0% |
!! | CTGAAATAACGGGTTCAACT+AGG | - | chr7.4:3315542-3315561 | MS.gene066566:intron | 40.0% |
!! | TATTGGCTGGCGAACTTTTA+AGG | - | chr7.4:3314526-3314545 | MS.gene066566:intron | 40.0% |
!! | TTAGGCTTTGTTTGGGAGTT+TGG | + | chr7.4:3317022-3317041 | None:intergenic | 40.0% |
!!! | AGTTTTCTGGTGTTGCAATG+GGG | - | chr7.4:3316552-3316571 | MS.gene066566:CDS | 40.0% |
!!! | CAATAGTTTTGAGAGGTGCT+AGG | - | chr7.4:3316585-3316604 | MS.gene066566:CDS | 40.0% |
!!! | CTTTTTTCCTGGAGTTTTCC+TGG | + | chr7.4:3317659-3317678 | None:intergenic | 40.0% |
!!! | TTGCAATGGAGGCATTTTCT+CGG | - | chr7.4:3317683-3317702 | MS.gene066566:intron | 40.0% |
!!! | TTTTTTTTTTTTGGGGGGCG+GGG | - | chr7.4:3316748-3316767 | MS.gene066566:intron | 40.0% |
AACAGACTCAGGGTTGTCAA+AGG | + | chr7.4:3316474-3316493 | None:intergenic | 45.0% | |
AACCCTGAGTCTGTTAAGCT+TGG | - | chr7.4:3316479-3316498 | MS.gene066566:CDS | 45.0% | |
AAGACTACCTTAGGCCCAAA+GGG | - | chr7.4:3314333-3314352 | MS.gene066566:CDS | 45.0% | |
AATTGCAGGTTTCCGAATGG+CGG | - | chr7.4:3314593-3314612 | MS.gene066566:intron | 45.0% | |
ACCCTGAGTCTGTTAAGCTT+GGG | - | chr7.4:3316480-3316499 | MS.gene066566:CDS | 45.0% | |
AGACGAAGAACCAAGTCACT+TGG | + | chr7.4:3318174-3318193 | None:intergenic | 45.0% | |
AGGTTGGAGACATGGTTGAA+CGG | - | chr7.4:3318396-3318415 | MS.gene066566:CDS | 45.0% | |
ATAGAAGACATTGGGAGGAC+CGG | + | chr7.4:3316953-3316972 | None:intergenic | 45.0% | |
ATGTTCTTGATGAAGCCGAG+AGG | - | chr7.4:3317524-3317543 | MS.gene066566:intron | 45.0% | |
ATTCTGTCTTCTCTCCTCCT+TGG | + | chr7.4:3318521-3318540 | None:intergenic | 45.0% | |
CAAGATGATGAAGTTGGCGA+TGG | - | chr7.4:3314486-3314505 | MS.gene066566:intron | 45.0% | |
CAGACCTGATGAACATTGCA+AGG | - | chr7.4:3314852-3314871 | MS.gene066566:intron | 45.0% | |
CAGCTGGGTTATCAATGTGA+AGG | + | chr7.4:3314437-3314456 | None:intergenic | 45.0% | |
CTAACTCCACCATGTTCACT+AGG | + | chr7.4:3318073-3318092 | None:intergenic | 45.0% | |
GACGAAGAACCAAGTCACTT+GGG | + | chr7.4:3318173-3318192 | None:intergenic | 45.0% | |
GAGAAGGTTGTGGACAACAA+AGG | - | chr7.4:3314642-3314661 | MS.gene066566:intron | 45.0% | |
GCCTTTGAGTGGTACATGTA+TGG | - | chr7.4:3317399-3317418 | MS.gene066566:intron | 45.0% | |
GCGGGGTGAGAAATATAAAG+TGG | - | chr7.4:3316765-3316784 | MS.gene066566:intron | 45.0% | |
GCTGGAATTGATGTCATCTC+TGG | - | chr7.4:3317808-3317827 | MS.gene066566:intron | 45.0% | |
GGAAAATAGGAAGGAGCAAG+TGG | + | chr7.4:3316981-3317000 | None:intergenic | 45.0% | |
TAAGACTACCTTAGGCCCAA+AGG | - | chr7.4:3314332-3314351 | MS.gene066566:CDS | 45.0% | |
TCAGACTGTCAATGACAGCA+GGG | - | chr7.4:3317576-3317595 | MS.gene066566:intron | 45.0% | |
TCGTAGTGCTTTGGTAGAGA+AGG | - | chr7.4:3314626-3314645 | MS.gene066566:intron | 45.0% | |
TCTCGGCTTCATCAAGAACA+TGG | + | chr7.4:3317525-3317544 | None:intergenic | 45.0% | |
TCTGATCACTGCATTCACTC+TGG | - | chr7.4:3317943-3317962 | MS.gene066566:CDS | 45.0% | |
TGCCACAAAAACAGACGTCA+AGG | + | chr7.4:3317498-3317517 | None:intergenic | 45.0% | |
TGCTTTGGTAGAGAAGGTTG+TGG | - | chr7.4:3314632-3314651 | MS.gene066566:intron | 45.0% | |
TTTCTCCATTGGTCCAACTG+TGG | - | chr7.4:3315064-3315083 | MS.gene066566:CDS | 45.0% | |
! | AACCTACCAGAAGTACACAC+CGG | + | chr7.4:3318381-3318400 | None:intergenic | 45.0% |
! | ACCTCTGTTGTTGTATTGGC+TGG | - | chr7.4:3314513-3314532 | MS.gene066566:intron | 45.0% |
! | AGGAAATTGATGCATTGGCC+AGG | - | chr7.4:3317638-3317657 | MS.gene066566:intron | 45.0% |
! | AGTCTGAGATAGCACACACA+AGG | + | chr7.4:3317563-3317582 | None:intergenic | 45.0% |
! | CTAGTGAACATGGTGGAGTT+AGG | - | chr7.4:3318071-3318090 | MS.gene066566:intron | 45.0% |
! | CTTTGTTTGGGAGTTTGGAG+GGG | + | chr7.4:3317017-3317036 | None:intergenic | 45.0% |
! | GATTGACTCCCTAGTGAACA+TGG | - | chr7.4:3318061-3318080 | MS.gene066566:intron | 45.0% |
! | TCATAACTTGTGCTCCAAGG+AGG | - | chr7.4:3318504-3318523 | MS.gene066566:CDS | 45.0% |
!! | GCCTGAAATGGTAATGGCAA+AGG | - | chr7.4:3317618-3317637 | MS.gene066566:intron | 45.0% |
!! | GCTTTGTTTGGGAGTTTGGA+GGG | + | chr7.4:3317018-3317037 | None:intergenic | 45.0% |
!! | TAGGCTTTGTTTGGAAGGGA+GGG | - | chr7.4:3316709-3316728 | MS.gene066566:CDS | 45.0% |
!! | TCGTGTTCGTGTTGACTCTA+TGG | - | chr7.4:3316232-3316251 | MS.gene066566:intron | 45.0% |
!! | TTAGGCTTTGTTTGGAAGGG+AGG | - | chr7.4:3316708-3316727 | MS.gene066566:CDS | 45.0% |
!!! | AGCCTTGACGTCTGTTTTTG+TGG | - | chr7.4:3317493-3317512 | MS.gene066566:intron | 45.0% |
!!! | TGCAATGGAGGCATTTTCTC+GGG | - | chr7.4:3317684-3317703 | MS.gene066566:intron | 45.0% |
!!! | GTTTTTTTTTTTTTTTTTTT+GGG | - | chr7.4:3316740-3316759 | MS.gene066566:intron | 5.0% |
!!! | TTTTTTTTTTTTTTTTTTTG+GGG | - | chr7.4:3316741-3316760 | MS.gene066566:intron | 5.0% |
AAGTTGAGCTAGCAGCCTAC+AGG | + | chr7.4:3318320-3318339 | None:intergenic | 50.0% | |
ACTGGTTGCAAACACTGCCA+TGG | - | chr7.4:3316181-3316200 | MS.gene066566:intron | 50.0% | |
AGAGGAGCTCTTTGCTGATG+CGG | - | chr7.4:3316370-3316389 | MS.gene066566:CDS | 50.0% | |
ATCCATTCCCTTTGGGCCTA+AGG | + | chr7.4:3314343-3314362 | None:intergenic | 50.0% | |
CAGAATGAGGGATGTACTGC+TGG | - | chr7.4:3317790-3317809 | MS.gene066566:intron | 50.0% | |
CAGCAGTACATCCCTCATTC+TGG | + | chr7.4:3317792-3317811 | None:intergenic | 50.0% | |
CGGCTTCATCAAGAACATGG+TGG | + | chr7.4:3317522-3317541 | None:intergenic | 50.0% | |
CTCAGACTGTCAATGACAGC+AGG | - | chr7.4:3317575-3317594 | MS.gene066566:intron | 50.0% | |
CTTCACCTTGTCTGTGTCCA+TGG | + | chr7.4:3316201-3316220 | None:intergenic | 50.0% | |
CTTCAGTCAGTGCCTTTGAG+TGG | - | chr7.4:3317388-3317407 | MS.gene066566:intron | 50.0% | |
GAGTCTATCAGTGATCCTCC+AGG | + | chr7.4:3315851-3315870 | None:intergenic | 50.0% | |
GCCAGCCAATACAACAACAG+AGG | + | chr7.4:3314517-3314536 | None:intergenic | 50.0% | |
GCCCAAGCTTAACAGACTCA+GGG | + | chr7.4:3316484-3316503 | None:intergenic | 50.0% | |
GGCATCATGCAATGACCTCT+CGG | + | chr7.4:3317542-3317561 | None:intergenic | 50.0% | |
GGTGTGTACTTCTGGTAGGT+TGG | - | chr7.4:3318380-3318399 | MS.gene066566:CDS | 50.0% | |
GGTTGGAGACATGGTTGAAC+GGG | - | chr7.4:3318397-3318416 | MS.gene066566:CDS | 50.0% | |
GTGGACAACAAAGGAGATGC+TGG | - | chr7.4:3314651-3314670 | MS.gene066566:intron | 50.0% | |
GTTGGAGACATGGTTGAACG+GGG | - | chr7.4:3318398-3318417 | MS.gene066566:CDS | 50.0% | |
TACCTTAGGCCCAAAGGGAA+TGG | - | chr7.4:3314338-3314357 | MS.gene066566:CDS | 50.0% | |
TGACTCCCTAGTGAACATGG+TGG | - | chr7.4:3318064-3318083 | MS.gene066566:intron | 50.0% | |
TGAGATTGAAGGAGCCGAGA+AGG | - | chr7.4:3316265-3316284 | MS.gene066566:CDS | 50.0% | |
TGAGTGTGCTCGTAGTGCTT+TGG | - | chr7.4:3314617-3314636 | MS.gene066566:intron | 50.0% | |
TGCCCAAGCTTAACAGACTC+AGG | + | chr7.4:3316485-3316504 | None:intergenic | 50.0% | |
TGTAGGCTGCTAGCTCAACT+TGG | - | chr7.4:3318319-3318338 | MS.gene066566:CDS | 50.0% | |
TTGGAGACATGGTTGAACGG+GGG | - | chr7.4:3318399-3318418 | MS.gene066566:CDS | 50.0% | |
TTGGGTTCCCCCTAATGAGA+GGG | - | chr7.4:3316884-3316903 | MS.gene066566:intron | 50.0% | |
! | CTTCTGGTAGGTTGGAGACA+TGG | - | chr7.4:3318388-3318407 | MS.gene066566:CDS | 50.0% |
! | GATGGAGTACCCAAGTGACT+TGG | - | chr7.4:3318161-3318180 | MS.gene066566:intron | 50.0% |
! | TGGTATTGAGCGTTTGGCTC+TGG | - | chr7.4:3316424-3316443 | MS.gene066566:CDS | 50.0% |
! | TTTGGGTTCCCCCTAATGAG+AGG | - | chr7.4:3316883-3316902 | MS.gene066566:intron | 50.0% |
!! | AATGACAGCAGGGTGTTGCT+TGG | - | chr7.4:3317586-3317605 | MS.gene066566:intron | 50.0% |
!! | GGCTTTGTTTGGGAGTTTGG+AGG | + | chr7.4:3317019-3317038 | None:intergenic | 50.0% |
CACTGCCATGGACACAGACA+AGG | - | chr7.4:3316193-3316212 | MS.gene066566:intron | 55.0% | |
CGACGAGGACTTTAGCAGCT+GGG | + | chr7.4:3314452-3314471 | None:intergenic | 55.0% | |
CGGGTGGCCTGAAATGGTAA+TGG | - | chr7.4:3317612-3317631 | MS.gene066566:intron | 55.0% | |
CTTCGACCGGTGTGTACTTC+TGG | - | chr7.4:3318372-3318391 | MS.gene066566:CDS | 55.0% | |
GACCGGTGTGTACTTCTGGT+AGG | - | chr7.4:3318376-3318395 | MS.gene066566:CDS | 55.0% | |
GAGGAGCTCTTTGCTGATGC+GGG | - | chr7.4:3316371-3316390 | MS.gene066566:CDS | 55.0% | |
GCATCAGCAAAGAGCTCCTC+TGG | + | chr7.4:3316371-3316390 | None:intergenic | 55.0% | |
TCGACGAGGACTTTAGCAGC+TGG | + | chr7.4:3314453-3314472 | None:intergenic | 55.0% | |
TTTGGGAGTTTGGAGGGGAG+AGG | + | chr7.4:3317012-3317031 | None:intergenic | 55.0% | |
! | GCATTGGCCAGGAAAACTCC+AGG | - | chr7.4:3317649-3317668 | MS.gene066566:intron | 55.0% |
! | GGCATTTTCTCGGGCTCTCT+TGG | - | chr7.4:3317693-3317712 | MS.gene066566:intron | 55.0% |
!! | CGTTTGGCTCTGGTAACTGG+TGG | - | chr7.4:3316434-3316453 | MS.gene066566:CDS | 55.0% |
!! | GAGCGTTTGGCTCTGGTAAC+TGG | - | chr7.4:3316431-3316450 | MS.gene066566:CDS | 55.0% |
!! | TTCTGGTGTTGCAATGGGGC+AGG | - | chr7.4:3316556-3316575 | MS.gene066566:CDS | 55.0% |
ACCCCCAAAGTCCTCTCCTC+CGG | - | chr7.4:3316931-3316950 | MS.gene066566:intron | 60.0% | |
ACCGGAGGAGAGGACTTTGG+GGG | + | chr7.4:3316935-3316954 | None:intergenic | 60.0% | |
AGGACCGGAGGAGAGGACTT+TGG | + | chr7.4:3316938-3316957 | None:intergenic | 60.0% | |
CCTCATTCTGGTGCTCAGCG+CGG | + | chr7.4:3317780-3317799 | None:intergenic | 60.0% | |
CGCGCTGAGCACCAGAATGA+GGG | - | chr7.4:3317778-3317797 | MS.gene066566:intron | 60.0% | |
GAAGACATTGGGAGGACCGG+AGG | + | chr7.4:3316950-3316969 | None:intergenic | 60.0% | |
GACCGGAGGAGAGGACTTTG+GGG | + | chr7.4:3316936-3316955 | None:intergenic | 60.0% | |
GAGCACACTCAGCCGCCATT+CGG | + | chr7.4:3314608-3314627 | None:intergenic | 60.0% | |
GGACCGGAGGAGAGGACTTT+GGG | + | chr7.4:3316937-3316956 | None:intergenic | 60.0% | |
GGAGTTTGGAGGGGAGAGGA+GGG | + | chr7.4:3317008-3317027 | None:intergenic | 60.0% | |
TAGCGGCCTAGCCATGCATC+AGG | - | chr7.4:3315698-3315717 | MS.gene066566:intron | 60.0% | |
TGGAGGGGAGAGGAGGGTTT+AGG | + | chr7.4:3317002-3317021 | None:intergenic | 60.0% | |
TTTGGAAGGGAGGGCAAGCG+AGG | - | chr7.4:3316718-3316737 | MS.gene066566:intron | 60.0% | |
!! | AGCAGGGTGTTGCTTGGAGG+CGG | - | chr7.4:3317592-3317611 | MS.gene066566:intron | 60.0% |
!! | GACAGCAGGGTGTTGCTTGG+AGG | - | chr7.4:3317589-3317608 | MS.gene066566:intron | 60.0% |
CATTGGGAGGACCGGAGGAG+AGG | + | chr7.4:3316945-3316964 | None:intergenic | 65.0% | |
CCGCGCTGAGCACCAGAATG+AGG | - | chr7.4:3317777-3317796 | MS.gene066566:intron | 65.0% | |
GGGAGTTTGGAGGGGAGAGG+AGG | + | chr7.4:3317009-3317028 | None:intergenic | 65.0% | |
TGGAGGCGGGTGGCCTGAAA+TGG | - | chr7.4:3317606-3317625 | MS.gene066566:intron | 65.0% | |
!! | GCAGGGTGTTGCTTGGAGGC+GGG | - | chr7.4:3317593-3317612 | MS.gene066566:intron | 65.0% |
!! | GGGTGTTGCTTGGAGGCGGG+TGG | - | chr7.4:3317596-3317615 | MS.gene066566:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 3314312 | 3318544 | 3314312 | ID=MS.gene066566 |
chr7.4 | mRNA | 3314312 | 3318544 | 3314312 | ID=MS.gene066566.t1;Parent=MS.gene066566 |
chr7.4 | exon | 3318184 | 3318544 | 3318184 | ID=MS.gene066566.t1.exon1;Parent=MS.gene066566.t1 |
chr7.4 | CDS | 3318184 | 3318544 | 3318184 | ID=cds.MS.gene066566.t1;Parent=MS.gene066566.t1 |
chr7.4 | exon | 3317901 | 3318016 | 3317901 | ID=MS.gene066566.t1.exon2;Parent=MS.gene066566.t1 |
chr7.4 | CDS | 3317901 | 3318016 | 3317901 | ID=cds.MS.gene066566.t1;Parent=MS.gene066566.t1 |
chr7.4 | exon | 3316971 | 3317047 | 3316971 | ID=MS.gene066566.t1.exon3;Parent=MS.gene066566.t1 |
chr7.4 | CDS | 3316971 | 3317047 | 3316971 | ID=cds.MS.gene066566.t1;Parent=MS.gene066566.t1 |
chr7.4 | exon | 3316250 | 3316735 | 3316250 | ID=MS.gene066566.t1.exon4;Parent=MS.gene066566.t1 |
chr7.4 | CDS | 3316250 | 3316735 | 3316250 | ID=cds.MS.gene066566.t1;Parent=MS.gene066566.t1 |
chr7.4 | exon | 3315022 | 3315337 | 3315022 | ID=MS.gene066566.t1.exon5;Parent=MS.gene066566.t1 |
chr7.4 | CDS | 3315022 | 3315337 | 3315022 | ID=cds.MS.gene066566.t1;Parent=MS.gene066566.t1 |
chr7.4 | exon | 3314312 | 3314458 | 3314312 | ID=MS.gene066566.t1.exon6;Parent=MS.gene066566.t1 |
chr7.4 | CDS | 3314312 | 3314458 | 3314312 | ID=cds.MS.gene066566.t1;Parent=MS.gene066566.t1 |
Gene Sequence |
Protein sequence |