Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71534.t1 | ACZ37068.1 | 95.4 | 131 | 6 | 0 | 22 | 152 | 1 | 131 | 7.90E-62 | 246.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71534.t1 | Q38879 | 59.4 | 133 | 52 | 1 | 22 | 152 | 1 | 133 | 2.8e-39 | 162.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71534.t1 | D8L5D9 | 95.4 | 131 | 6 | 0 | 22 | 152 | 1 | 131 | 5.7e-62 | 246.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04918 | MS.gene71534 | 0.812755 | 3.61E-51 | -1.69E-46 |
| MS.gene049254 | MS.gene71534 | 0.868227 | 7.64E-66 | -1.69E-46 |
| MS.gene049404 | MS.gene71534 | 0.862786 | 3.96E-64 | -1.69E-46 |
| MS.gene049711 | MS.gene71534 | 0.828236 | 1.01E-54 | -1.69E-46 |
| MS.gene049807 | MS.gene71534 | 0.818366 | 2.03E-52 | -1.69E-46 |
| MS.gene049821 | MS.gene71534 | 0.806517 | 7.92E-50 | -1.69E-46 |
| MS.gene049824 | MS.gene71534 | 0.801884 | 7.29E-49 | -1.69E-46 |
| MS.gene049825 | MS.gene71534 | 0.816253 | 6.08E-52 | -1.69E-46 |
| MS.gene049873 | MS.gene71534 | 0.824983 | 6.01E-54 | -1.69E-46 |
| MS.gene050026 | MS.gene71534 | 0.81594 | 7.14E-52 | -1.69E-46 |
| MS.gene050273 | MS.gene71534 | 0.84829 | 6.74E-60 | -1.69E-46 |
| MS.gene050559 | MS.gene71534 | 0.880748 | 4.25E-70 | -1.69E-46 |
| MS.gene050561 | MS.gene71534 | 0.872967 | 2.12E-67 | -1.69E-46 |
| MS.gene050562 | MS.gene71534 | 0.862811 | 3.89E-64 | -1.69E-46 |
| MS.gene050689 | MS.gene71534 | 0.806489 | 8.02E-50 | -1.69E-46 |
| MS.gene050759 | MS.gene71534 | 0.816115 | 6.53E-52 | -1.69E-46 |
| MS.gene050807 | MS.gene71534 | 0.804149 | 2.48E-49 | -1.69E-46 |
| MS.gene050901 | MS.gene71534 | 0.801197 | 1.01E-48 | -1.69E-46 |
| MS.gene050962 | MS.gene71534 | 0.804815 | 1.80E-49 | -1.69E-46 |
| MS.gene051198 | MS.gene71534 | 0.823231 | 1.55E-53 | -1.69E-46 |
| MS.gene051247 | MS.gene71534 | 0.812812 | 3.51E-51 | -1.69E-46 |
| MS.gene051279 | MS.gene71534 | 0.874406 | 6.92E-68 | -1.69E-46 |
| MS.gene051328 | MS.gene71534 | 0.80762 | 4.62E-50 | -1.69E-46 |
| MS.gene051594 | MS.gene71534 | 0.806026 | 1.00E-49 | -1.69E-46 |
| MS.gene051720 | MS.gene71534 | 0.816811 | 4.56E-52 | -1.69E-46 |
| MS.gene051744 | MS.gene71534 | 0.885082 | 1.10E-71 | -1.69E-46 |
| MS.gene051957 | MS.gene71534 | 0.807094 | 5.98E-50 | -1.69E-46 |
| MS.gene052037 | MS.gene71534 | 0.833795 | 4.34E-56 | -1.69E-46 |
| MS.gene052239 | MS.gene71534 | -0.840617 | 7.81E-58 | -1.69E-46 |
| MS.gene052516 | MS.gene71534 | 0.832707 | 8.11E-56 | -1.69E-46 |
| MS.gene052519 | MS.gene71534 | 0.841814 | 3.78E-58 | -1.69E-46 |
| MS.gene052561 | MS.gene71534 | 0.800301 | 1.54E-48 | -1.69E-46 |
| MS.gene052582 | MS.gene71534 | 0.842287 | 2.84E-58 | -1.69E-46 |
| MS.gene052584 | MS.gene71534 | 0.845418 | 4.11E-59 | -1.69E-46 |
| MS.gene052616 | MS.gene71534 | 0.816555 | 5.21E-52 | -1.69E-46 |
| MS.gene052773 | MS.gene71534 | 0.801003 | 1.11E-48 | -1.69E-46 |
| MS.gene053006 | MS.gene71534 | 0.840571 | 8.03E-58 | -1.69E-46 |
| MS.gene053079 | MS.gene71534 | 0.810263 | 1.26E-50 | -1.69E-46 |
| MS.gene053122 | MS.gene71534 | 0.811073 | 8.40E-51 | -1.69E-46 |
| MS.gene053144 | MS.gene71534 | 0.814454 | 1.53E-51 | -1.69E-46 |
| MS.gene053226 | MS.gene71534 | 0.855927 | 4.54E-62 | -1.69E-46 |
| MS.gene053581 | MS.gene71534 | 0.808356 | 3.22E-50 | -1.69E-46 |
| MS.gene053599 | MS.gene71534 | 0.822743 | 2.01E-53 | -1.69E-46 |
| MS.gene05364 | MS.gene71534 | 0.806576 | 7.69E-50 | -1.69E-46 |
| MS.gene053883 | MS.gene71534 | 0.805359 | 1.39E-49 | -1.69E-46 |
| MS.gene053931 | MS.gene71534 | 0.833462 | 5.26E-56 | -1.69E-46 |
| MS.gene053995 | MS.gene71534 | 0.82002 | 8.55E-53 | -1.69E-46 |
| MS.gene053998 | MS.gene71534 | 0.801129 | 1.04E-48 | -1.69E-46 |
| MS.gene05415 | MS.gene71534 | 0.816943 | 4.26E-52 | -1.69E-46 |
| MS.gene054576 | MS.gene71534 | 0.803549 | 3.31E-49 | -1.69E-46 |
| MS.gene054584 | MS.gene71534 | 0.807755 | 4.33E-50 | -1.69E-46 |
| MS.gene054651 | MS.gene71534 | 0.881171 | 3.00E-70 | -1.69E-46 |
| MS.gene054775 | MS.gene71534 | 0.804602 | 2.00E-49 | -1.69E-46 |
| MS.gene055227 | MS.gene71534 | 0.803334 | 3.66E-49 | -1.69E-46 |
| MS.gene055228 | MS.gene71534 | 0.808109 | 3.64E-50 | -1.69E-46 |
| MS.gene055464 | MS.gene71534 | 0.817613 | 3.01E-52 | -1.69E-46 |
| MS.gene055466 | MS.gene71534 | 0.810265 | 1.26E-50 | -1.69E-46 |
| MS.gene055512 | MS.gene71534 | 0.80344 | 3.48E-49 | -1.69E-46 |
| MS.gene055580 | MS.gene71534 | -0.822224 | 2.66E-53 | -1.69E-46 |
| MS.gene055586 | MS.gene71534 | 0.804918 | 1.72E-49 | -1.69E-46 |
| MS.gene055589 | MS.gene71534 | 0.800085 | 1.70E-48 | -1.69E-46 |
| MS.gene055778 | MS.gene71534 | 0.826054 | 3.35E-54 | -1.69E-46 |
| MS.gene055808 | MS.gene71534 | 0.821465 | 3.98E-53 | -1.69E-46 |
| MS.gene055818 | MS.gene71534 | 0.821953 | 3.07E-53 | -1.69E-46 |
| MS.gene055841 | MS.gene71534 | 0.823089 | 1.67E-53 | -1.69E-46 |
| MS.gene056050 | MS.gene71534 | 0.830281 | 3.21E-55 | -1.69E-46 |
| MS.gene056091 | MS.gene71534 | 0.807142 | 5.84E-50 | -1.69E-46 |
| MS.gene056174 | MS.gene71534 | 0.845383 | 4.20E-59 | -1.69E-46 |
| MS.gene056215 | MS.gene71534 | 0.802073 | 6.67E-49 | -1.69E-46 |
| MS.gene056366 | MS.gene71534 | 0.84828 | 6.78E-60 | -1.69E-46 |
| MS.gene056498 | MS.gene71534 | 0.800622 | 1.32E-48 | -1.69E-46 |
| MS.gene056595 | MS.gene71534 | 0.810091 | 1.37E-50 | -1.69E-46 |
| MS.gene056677 | MS.gene71534 | 0.826712 | 2.33E-54 | -1.69E-46 |
| MS.gene056699 | MS.gene71534 | 0.830642 | 2.62E-55 | -1.69E-46 |
| MS.gene05686 | MS.gene71534 | 0.856412 | 3.27E-62 | -1.69E-46 |
| MS.gene05690 | MS.gene71534 | 0.80682 | 6.83E-50 | -1.69E-46 |
| MS.gene057034 | MS.gene71534 | 0.816777 | 4.64E-52 | -1.69E-46 |
| MS.gene057060 | MS.gene71534 | 0.813402 | 2.61E-51 | -1.69E-46 |
| MS.gene057102 | MS.gene71534 | 0.82238 | 2.44E-53 | -1.69E-46 |
| MS.gene057208 | MS.gene71534 | 0.846321 | 2.34E-59 | -1.69E-46 |
| MS.gene057314 | MS.gene71534 | 0.827317 | 1.67E-54 | -1.69E-46 |
| MS.gene057444 | MS.gene71534 | 0.840585 | 7.96E-58 | -1.69E-46 |
| MS.gene057693 | MS.gene71534 | 0.810201 | 1.30E-50 | -1.69E-46 |
| MS.gene057694 | MS.gene71534 | 0.820365 | 7.13E-53 | -1.69E-46 |
| MS.gene057705 | MS.gene71534 | 0.856222 | 3.72E-62 | -1.69E-46 |
| MS.gene058008 | MS.gene71534 | 0.837757 | 4.31E-57 | -1.69E-46 |
| MS.gene058009 | MS.gene71534 | 0.843392 | 1.44E-58 | -1.69E-46 |
| MS.gene058010 | MS.gene71534 | 0.838594 | 2.62E-57 | -1.69E-46 |
| MS.gene058037 | MS.gene71534 | 0.827007 | 1.98E-54 | -1.69E-46 |
| MS.gene058279 | MS.gene71534 | 0.806286 | 8.86E-50 | -1.69E-46 |
| MS.gene05847 | MS.gene71534 | 0.814967 | 1.18E-51 | -1.69E-46 |
| MS.gene058625 | MS.gene71534 | 0.829694 | 4.46E-55 | -1.69E-46 |
| MS.gene058635 | MS.gene71534 | 0.803215 | 3.88E-49 | -1.69E-46 |
| MS.gene058781 | MS.gene71534 | 0.826618 | 2.46E-54 | -1.69E-46 |
| MS.gene058783 | MS.gene71534 | 0.848413 | 6.23E-60 | -1.69E-46 |
| MS.gene058979 | MS.gene71534 | 0.818068 | 2.38E-52 | -1.69E-46 |
| MS.gene059015 | MS.gene71534 | 0.817525 | 3.15E-52 | -1.69E-46 |
| MS.gene05952 | MS.gene71534 | 0.800972 | 1.12E-48 | -1.69E-46 |
| MS.gene05953 | MS.gene71534 | 0.80376 | 2.99E-49 | -1.69E-46 |
| MS.gene05954 | MS.gene71534 | 0.829023 | 6.49E-55 | -1.69E-46 |
| MS.gene059625 | MS.gene71534 | 0.829019 | 6.51E-55 | -1.69E-46 |
| MS.gene059842 | MS.gene71534 | 0.816412 | 5.60E-52 | -1.69E-46 |
| MS.gene05985 | MS.gene71534 | -0.820366 | 7.12E-53 | -1.69E-46 |
| MS.gene059965 | MS.gene71534 | 0.806786 | 6.95E-50 | -1.69E-46 |
| MS.gene060258 | MS.gene71534 | 0.804603 | 2.00E-49 | -1.69E-46 |
| MS.gene060310 | MS.gene71534 | 0.822344 | 2.49E-53 | -1.69E-46 |
| MS.gene060365 | MS.gene71534 | 0.836173 | 1.09E-56 | -1.69E-46 |
| MS.gene060429 | MS.gene71534 | 0.85344 | 2.39E-61 | -1.69E-46 |
| MS.gene060521 | MS.gene71534 | 0.833724 | 4.52E-56 | -1.69E-46 |
| MS.gene060587 | MS.gene71534 | 0.822151 | 2.76E-53 | -1.69E-46 |
| MS.gene060840 | MS.gene71534 | 0.814881 | 1.23E-51 | -1.69E-46 |
| MS.gene060935 | MS.gene71534 | 0.804848 | 1.77E-49 | -1.69E-46 |
| MS.gene061100 | MS.gene71534 | 0.812634 | 3.84E-51 | -1.69E-46 |
| MS.gene061188 | MS.gene71534 | 0.80572 | 1.16E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 31 sgRNAs with CRISPR-Local
Find 70 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATGTGGCACAAGAGTTTA+AGG | 0.257673 | 7.2:+88607060 | MS.gene71534:intron |
| AATCGATGTTGATGAATTAT+CGG | 0.348841 | 7.2:+88606453 | MS.gene71534:CDS |
| TGTGGTTGACTTTACTTGCT+TGG | 0.384738 | 7.2:-88606054 | None:intergenic |
| AAAGAGGTTGATAAGGTTGT+TGG | 0.418770 | 7.2:+88607121 | MS.gene71534:CDS |
| GCTGTCTTTGTGCTGAATGT+TGG | 0.441277 | 7.2:-88606086 | None:intergenic |
| TTAGCCATGGCTTGAAGAAT+CGG | 0.442279 | 7.2:-88606403 | None:intergenic |
| CGTTTGTGTTGTTGAAGAAT+GGG | 0.453169 | 7.2:+88607098 | MS.gene71534:CDS |
| ACGTTTGTGTTGTTGAAGAA+TGG | 0.456074 | 7.2:+88607097 | MS.gene71534:CDS |
| TTCTCCTCCTTAGTCGGCAG+TGG | 0.459284 | 7.2:+88606122 | MS.gene71534:CDS |
| TAAGGTTGTTGGAGCAAAGA+AGG | 0.462298 | 7.2:+88607132 | MS.gene71534:CDS |
| TACGGGGCCACTGCCGACTA+AGG | 0.463959 | 7.2:-88606129 | None:intergenic |
| TTCAGCACAAAGACAGCAAT+GGG | 0.470933 | 7.2:+88606092 | MS.gene71534:CDS |
| TGATTGATTTCTCTGCTACA+TGG | 0.471205 | 7.2:+88606356 | MS.gene71534:CDS |
| TGATGATTCTGATGACTGTA+CGG | 0.487264 | 7.2:-88606147 | None:intergenic |
| GAATGGGAAAGAGGTTGATA+AGG | 0.491854 | 7.2:+88607114 | MS.gene71534:CDS |
| GATGATTCTGATGACTGTAC+GGG | 0.500909 | 7.2:-88606146 | None:intergenic |
| GATTTCTCTGCTACATGGTG+TGG | 0.519111 | 7.2:+88606361 | MS.gene71534:CDS |
| GGCACAAGAGTTTAAGGTGC+AGG | 0.519916 | 7.2:+88607066 | MS.gene71534:CDS |
| ATCAGTGAATTCATTAGCCA+TGG | 0.533887 | 7.2:-88606416 | None:intergenic |
| GTGTGGACCTTGTAAAATGA+TGG | 0.541235 | 7.2:+88606378 | MS.gene71534:CDS |
| CCTTCCACTCATCTGCTCGC+TGG | 0.549073 | 7.2:+88606189 | MS.gene71534:CDS |
| GTTGTTGAAGAATGGGAAAG+AGG | 0.553595 | 7.2:+88607105 | MS.gene71534:CDS |
| AGATGAGTGGAAGGTCTTGA+CGG | 0.570930 | 7.2:-88606180 | None:intergenic |
| GAATGTTGGAGTTGTTCTTG+TGG | 0.588851 | 7.2:-88606072 | None:intergenic |
| GGGGCCACTGCCGACTAAGG+AGG | 0.594415 | 7.2:-88606126 | None:intergenic |
| GTTGCCAGCGAGCAGATGAG+TGG | 0.605035 | 7.2:-88606193 | None:intergenic |
| TTCTTCAACAACACAAACGT+TGG | 0.610426 | 7.2:-88607094 | None:intergenic |
| ATTCAGCACAAAGACAGCAA+TGG | 0.613497 | 7.2:+88606091 | MS.gene71534:CDS |
| CCAGCGAGCAGATGAGTGGA+AGG | 0.627549 | 7.2:-88606189 | None:intergenic |
| GGAACCGATTCTTCAAGCCA+TGG | 0.630372 | 7.2:+88606399 | MS.gene71534:CDS |
| ATGATTCTGATGACTGTACG+GGG | 0.715538 | 7.2:-88606145 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAAAATAGAAAAATAAAA+TGG | - | chr7.2:88606291-88606310 | None:intergenic | 10.0% |
| !!! | CATTTTATTTTTCTATTTTT+TGG | + | chr7.2:88606289-88606308 | MS.gene71534:intron | 10.0% |
| !!! | TCATTTTTACAAATTATTAT+CGG | + | chr7.2:88606954-88606973 | MS.gene71534:intron | 10.0% |
| !!! | TGATAATAGTAAATTTTAAA+AGG | - | chr7.2:88606787-88606806 | None:intergenic | 10.0% |
| !!! | AATTATACAAAAAGCATTTA+AGG | + | chr7.2:88606742-88606761 | MS.gene71534:intron | 15.0% |
| !!! | AGTAAATTTTAAAAGGAAAA+AGG | - | chr7.2:88606780-88606799 | None:intergenic | 15.0% |
| !!! | ATAATGTTTTAATTTTTGTG+TGG | + | chr7.2:88607018-88607037 | MS.gene71534:intron | 15.0% |
| !!! | ATTTTAAAAGGAAAAAGGTT+AGG | - | chr7.2:88606775-88606794 | None:intergenic | 20.0% |
| !!! | TTAATTTTTGTGTGGTTTTT+TGG | + | chr7.2:88607026-88607045 | MS.gene71534:intron | 20.0% |
| ! | ATTGAGATCTAAAGAGATAT+GGG | - | chr7.2:88606260-88606279 | None:intergenic | 25.0% |
| ! | TATTGAGATCTAAAGAGATA+TGG | - | chr7.2:88606261-88606280 | None:intergenic | 25.0% |
| ! | TTCACAAACAGAAAATCAAA+AGG | - | chr7.2:88606331-88606350 | None:intergenic | 25.0% |
| ! | TTCTCAAAGTTTATTATAGC+AGG | - | chr7.2:88606700-88606719 | None:intergenic | 25.0% |
| !! | AATCGATGTTGATGAATTAT+CGG | + | chr7.2:88606453-88606472 | MS.gene71534:CDS | 25.0% |
| !! | AATTCTGTTATTTGTTGCAA+TGG | + | chr7.2:88606610-88606629 | MS.gene71534:intron | 25.0% |
| !! | TGAATCAATTTTTGACCATA+CGG | - | chr7.2:88606828-88606847 | None:intergenic | 25.0% |
| !!! | TTTTGATTTTCTGTTTGTGA+AGG | + | chr7.2:88606330-88606349 | MS.gene71534:intron | 25.0% |
| AACACAACAGTTCATCAAAT+TGG | - | chr7.2:88606493-88606512 | None:intergenic | 30.0% | |
| ACACAACAGTTCATCAAATT+GGG | - | chr7.2:88606492-88606511 | None:intergenic | 30.0% | |
| GAAGGATGAACTTAAAAACA+AGG | + | chr7.2:88607150-88607169 | MS.gene71534:CDS | 30.0% | |
| TTAAAAGGAAAAAGGTTAGG+TGG | - | chr7.2:88606772-88606791 | None:intergenic | 30.0% | |
| ! | TGGTCAAAAATTGATTCACT+CGG | + | chr7.2:88606830-88606849 | MS.gene71534:intron | 30.0% |
| ! | TTCTTTAGATGTTTTTCGTG+TGG | + | chr7.2:88606649-88606668 | MS.gene71534:intron | 30.0% |
| !! | ATTTTTGTGTGGTTTTTTGG+TGG | + | chr7.2:88607029-88607048 | MS.gene71534:intron | 30.0% |
| !! | TTTTTGTGTGGTTTTTTGGT+GGG | + | chr7.2:88607030-88607049 | MS.gene71534:intron | 30.0% |
| ATCAGTGAATTCATTAGCCA+TGG | - | chr7.2:88606419-88606438 | None:intergenic | 35.0% | |
| CACAACAGTTCATCAAATTG+GGG | - | chr7.2:88606491-88606510 | None:intergenic | 35.0% | |
| TGATGATTCTGATGACTGTA+CGG | - | chr7.2:88606150-88606169 | None:intergenic | 35.0% | |
| TTCTTCAACAACACAAACGT+TGG | - | chr7.2:88607097-88607116 | None:intergenic | 35.0% | |
| ! | ACGTTTGTGTTGTTGAAGAA+TGG | + | chr7.2:88607097-88607116 | MS.gene71534:CDS | 35.0% |
| ! | CGTTTGTGTTGTTGAAGAAT+GGG | + | chr7.2:88607098-88607117 | MS.gene71534:CDS | 35.0% |
| ! | CTGTTATTTGTTGCAATGGA+TGG | + | chr7.2:88606614-88606633 | MS.gene71534:intron | 35.0% |
| ! | TGATTGATTTCTCTGCTACA+TGG | + | chr7.2:88606356-88606375 | MS.gene71534:CDS | 35.0% |
| ! | TGATTTTCTGTTTGTGAAGG+TGG | + | chr7.2:88606333-88606352 | MS.gene71534:intron | 35.0% |
| !! | AAAGAGGTTGATAAGGTTGT+TGG | + | chr7.2:88607121-88607140 | MS.gene71534:CDS | 35.0% |
| !! | ATCGGTTCCATCATTTTACA+AGG | - | chr7.2:88606388-88606407 | None:intergenic | 35.0% |
| !! | TCATTTTTCTCCTCCTTAGT+CGG | + | chr7.2:88606116-88606135 | MS.gene71534:CDS | 35.0% |
| !!! | GGTTTTTTGGTGGGAATTAT+AGG | + | chr7.2:88607039-88607058 | MS.gene71534:intron | 35.0% |
| AAAATTTCGCACCCACACTT+CGG | + | chr7.2:88606527-88606546 | MS.gene71534:intron | 40.0% | |
| ATGATTCTGATGACTGTACG+GGG | - | chr7.2:88606148-88606167 | None:intergenic | 40.0% | |
| ATTCAGCACAAAGACAGCAA+TGG | + | chr7.2:88606091-88606110 | MS.gene71534:CDS | 40.0% | |
| GAATGTTGGAGTTGTTCTTG+TGG | - | chr7.2:88606075-88606094 | None:intergenic | 40.0% | |
| GATGATTCTGATGACTGTAC+GGG | - | chr7.2:88606149-88606168 | None:intergenic | 40.0% | |
| GTGTGGACCTTGTAAAATGA+TGG | + | chr7.2:88606378-88606397 | MS.gene71534:CDS | 40.0% | |
| GTTGTTGAAGAATGGGAAAG+AGG | + | chr7.2:88607105-88607124 | MS.gene71534:CDS | 40.0% | |
| TAAGGTTGTTGGAGCAAAGA+AGG | + | chr7.2:88607132-88607151 | MS.gene71534:CDS | 40.0% | |
| TTAGCCATGGCTTGAAGAAT+CGG | - | chr7.2:88606406-88606425 | None:intergenic | 40.0% | |
| TTCAGCACAAAGACAGCAAT+GGG | + | chr7.2:88606092-88606111 | MS.gene71534:CDS | 40.0% | |
| TTGGTGGGAATTATAGGATG+TGG | + | chr7.2:88607045-88607064 | MS.gene71534:intron | 40.0% | |
| TTTGACCATACGGTCTAACA+TGG | - | chr7.2:88606818-88606837 | None:intergenic | 40.0% | |
| ! | TGTGGTTGACTTTACTTGCT+TGG | - | chr7.2:88606057-88606076 | None:intergenic | 40.0% |
| !! | GAATGGGAAAGAGGTTGATA+AGG | + | chr7.2:88607114-88607133 | MS.gene71534:CDS | 40.0% |
| AGATGAGTGGAAGGTCTTGA+CGG | - | chr7.2:88606183-88606202 | None:intergenic | 45.0% | |
| CTTGTCCATGTTAGACCGTA+TGG | + | chr7.2:88606810-88606829 | MS.gene71534:intron | 45.0% | |
| GATTTCTCTGCTACATGGTG+TGG | + | chr7.2:88606361-88606380 | MS.gene71534:CDS | 45.0% | |
| GCTGTCTTTGTGCTGAATGT+TGG | - | chr7.2:88606089-88606108 | None:intergenic | 45.0% | |
| GGATGTGGCACAAGAGTTTA+AGG | + | chr7.2:88607060-88607079 | MS.gene71534:intron | 45.0% | |
| ! | GATATGGGTTTTACGAGACG+AGG | - | chr7.2:88606245-88606264 | None:intergenic | 45.0% |
| ! | GGTTCAAAAGCACAAAGCGT+AGG | + | chr7.2:88607171-88607190 | MS.gene71534:CDS | 45.0% |
| AAGCCTTCTCTCCGAAGTGT+GGG | - | chr7.2:88606541-88606560 | None:intergenic | 50.0% | |
| TAAGCCTTCTCTCCGAAGTG+TGG | - | chr7.2:88606542-88606561 | None:intergenic | 50.0% | |
| ! | GGAACCGATTCTTCAAGCCA+TGG | + | chr7.2:88606399-88606418 | MS.gene71534:CDS | 50.0% |
| ! | GGCACAAGAGTTTAAGGTGC+AGG | + | chr7.2:88607066-88607085 | MS.gene71534:CDS | 50.0% |
| TTCTCCTCCTTAGTCGGCAG+TGG | + | chr7.2:88606122-88606141 | MS.gene71534:CDS | 55.0% | |
| CCAGCGAGCAGATGAGTGGA+AGG | - | chr7.2:88606192-88606211 | None:intergenic | 60.0% | |
| CCTTCCACTCATCTGCTCGC+TGG | + | chr7.2:88606189-88606208 | MS.gene71534:CDS | 60.0% | |
| GCACCCACACTTCGGAGAGA+AGG | + | chr7.2:88606535-88606554 | MS.gene71534:intron | 60.0% | |
| GTTGCCAGCGAGCAGATGAG+TGG | - | chr7.2:88606196-88606215 | None:intergenic | 60.0% | |
| ! | TACGGGGCCACTGCCGACTA+AGG | - | chr7.2:88606132-88606151 | None:intergenic | 65.0% |
| ! | GGGGCCACTGCCGACTAAGG+AGG | - | chr7.2:88606129-88606148 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 88606045 | 88607192 | 88606045 | ID=MS.gene71534 |
| chr7.2 | mRNA | 88606045 | 88607192 | 88606045 | ID=MS.gene71534.t1;Parent=MS.gene71534 |
| chr7.2 | exon | 88606045 | 88606250 | 88606045 | ID=MS.gene71534.t1.exon1;Parent=MS.gene71534.t1 |
| chr7.2 | CDS | 88606045 | 88606250 | 88606045 | ID=cds.MS.gene71534.t1;Parent=MS.gene71534.t1 |
| chr7.2 | exon | 88606352 | 88606474 | 88606352 | ID=MS.gene71534.t1.exon2;Parent=MS.gene71534.t1 |
| chr7.2 | CDS | 88606352 | 88606474 | 88606352 | ID=cds.MS.gene71534.t1;Parent=MS.gene71534.t1 |
| chr7.2 | exon | 88607061 | 88607192 | 88607061 | ID=MS.gene71534.t1.exon3;Parent=MS.gene71534.t1 |
| chr7.2 | CDS | 88607061 | 88607192 | 88607061 | ID=cds.MS.gene71534.t1;Parent=MS.gene71534.t1 |
| Gene Sequence |
| Protein sequence |
