Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71704.t1 | XP_013470093.1 | 76.1 | 377 | 15 | 2 | 1 | 305 | 1 | 374 | 9.40E-139 | 503.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71704.t1 | A2RVM8 | 34.3 | 350 | 110 | 9 | 1 | 267 | 1 | 313 | 1.7e-27 | 124.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71704.t1 | A0A072VR18 | 76.1 | 377 | 15 | 2 | 1 | 305 | 1 | 374 | 6.8e-139 | 503.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene71704 | 0.804876 | 1.75E-49 | -1.69E-46 |
| MS.gene049159 | MS.gene71704 | 0.800723 | 1.26E-48 | -1.69E-46 |
| MS.gene049190 | MS.gene71704 | 0.856206 | 3.76E-62 | -1.69E-46 |
| MS.gene049271 | MS.gene71704 | 0.814182 | 1.75E-51 | -1.69E-46 |
| MS.gene049341 | MS.gene71704 | 0.808163 | 3.54E-50 | -1.69E-46 |
| MS.gene049404 | MS.gene71704 | 0.816487 | 5.39E-52 | -1.69E-46 |
| MS.gene049501 | MS.gene71704 | 0.815612 | 8.45E-52 | -1.69E-46 |
| MS.gene049672 | MS.gene71704 | 0.827331 | 1.66E-54 | -1.69E-46 |
| MS.gene049711 | MS.gene71704 | 0.824386 | 8.30E-54 | -1.69E-46 |
| MS.gene049770 | MS.gene71704 | 0.810899 | 9.16E-51 | -1.69E-46 |
| MS.gene049821 | MS.gene71704 | 0.83478 | 2.46E-56 | -1.69E-46 |
| MS.gene049824 | MS.gene71704 | 0.804761 | 1.85E-49 | -1.69E-46 |
| MS.gene049825 | MS.gene71704 | 0.807717 | 4.41E-50 | -1.69E-46 |
| MS.gene049850 | MS.gene71704 | 0.858799 | 6.43E-63 | -1.69E-46 |
| MS.gene049873 | MS.gene71704 | 0.820616 | 6.24E-53 | -1.69E-46 |
| MS.gene050020 | MS.gene71704 | 0.860581 | 1.87E-63 | -1.69E-46 |
| MS.gene05016 | MS.gene71704 | 0.815422 | 9.32E-52 | -1.69E-46 |
| MS.gene050241 | MS.gene71704 | 0.810575 | 1.08E-50 | -1.69E-46 |
| MS.gene05045 | MS.gene71704 | 0.852296 | 5.07E-61 | -1.69E-46 |
| MS.gene050561 | MS.gene71704 | 0.800575 | 1.35E-48 | -1.69E-46 |
| MS.gene050586 | MS.gene71704 | 0.809649 | 1.70E-50 | -1.69E-46 |
| MS.gene050780 | MS.gene71704 | 0.812923 | 3.32E-51 | -1.69E-46 |
| MS.gene050807 | MS.gene71704 | 0.837513 | 4.97E-57 | -1.69E-46 |
| MS.gene050808 | MS.gene71704 | 0.814978 | 1.17E-51 | -1.69E-46 |
| MS.gene050901 | MS.gene71704 | 0.822851 | 1.90E-53 | -1.69E-46 |
| MS.gene050959 | MS.gene71704 | 0.808909 | 2.46E-50 | -1.69E-46 |
| MS.gene051018 | MS.gene71704 | 0.813736 | 2.20E-51 | -1.69E-46 |
| MS.gene051199 | MS.gene71704 | 0.830324 | 3.13E-55 | -1.69E-46 |
| MS.gene051247 | MS.gene71704 | 0.872949 | 2.15E-67 | -1.69E-46 |
| MS.gene051265 | MS.gene71704 | 0.830616 | 2.66E-55 | -1.69E-46 |
| MS.gene051279 | MS.gene71704 | 0.819318 | 1.24E-52 | -1.69E-46 |
| MS.gene051328 | MS.gene71704 | 0.809715 | 1.65E-50 | -1.69E-46 |
| MS.gene051388 | MS.gene71704 | 0.806139 | 9.51E-50 | -1.69E-46 |
| MS.gene05157 | MS.gene71704 | 0.855415 | 6.41E-62 | -1.69E-46 |
| MS.gene051700 | MS.gene71704 | 0.811879 | 5.61E-51 | -1.69E-46 |
| MS.gene051719 | MS.gene71704 | 0.859783 | 3.26E-63 | -1.69E-46 |
| MS.gene051720 | MS.gene71704 | 0.880147 | 6.97E-70 | -1.69E-46 |
| MS.gene051744 | MS.gene71704 | 0.874973 | 4.44E-68 | -1.69E-46 |
| MS.gene051957 | MS.gene71704 | 0.839341 | 1.68E-57 | -1.69E-46 |
| MS.gene052020 | MS.gene71704 | 0.851133 | 1.08E-60 | -1.69E-46 |
| MS.gene052133 | MS.gene71704 | 0.851564 | 8.18E-61 | -1.69E-46 |
| MS.gene052323 | MS.gene71704 | 0.800087 | 1.70E-48 | -1.69E-46 |
| MS.gene052488 | MS.gene71704 | 0.811083 | 8.36E-51 | -1.69E-46 |
| MS.gene052516 | MS.gene71704 | 0.8302 | 3.36E-55 | -1.69E-46 |
| MS.gene052519 | MS.gene71704 | 0.821013 | 5.06E-53 | -1.69E-46 |
| MS.gene052582 | MS.gene71704 | 0.826271 | 2.97E-54 | -1.69E-46 |
| MS.gene052584 | MS.gene71704 | 0.836353 | 9.84E-57 | -1.69E-46 |
| MS.gene052611 | MS.gene71704 | 0.836209 | 1.07E-56 | -1.69E-46 |
| MS.gene052612 | MS.gene71704 | 0.813346 | 2.68E-51 | -1.69E-46 |
| MS.gene052613 | MS.gene71704 | 0.812212 | 4.75E-51 | -1.69E-46 |
| MS.gene052616 | MS.gene71704 | 0.803354 | 3.63E-49 | -1.69E-46 |
| MS.gene052665 | MS.gene71704 | 0.836456 | 9.26E-57 | -1.69E-46 |
| MS.gene052732 | MS.gene71704 | 0.823657 | 1.23E-53 | -1.69E-46 |
| MS.gene052773 | MS.gene71704 | 0.816489 | 5.39E-52 | -1.69E-46 |
| MS.gene052863 | MS.gene71704 | 0.80525 | 1.46E-49 | -1.69E-46 |
| MS.gene052879 | MS.gene71704 | 0.803117 | 4.06E-49 | -1.69E-46 |
| MS.gene052896 | MS.gene71704 | 0.808944 | 2.41E-50 | -1.69E-46 |
| MS.gene053122 | MS.gene71704 | 0.810504 | 1.12E-50 | -1.69E-46 |
| MS.gene053144 | MS.gene71704 | 0.86551 | 5.60E-65 | -1.69E-46 |
| MS.gene053174 | MS.gene71704 | 0.82455 | 7.60E-54 | -1.69E-46 |
| MS.gene053221 | MS.gene71704 | 0.801672 | 8.06E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene71704 | 0.875464 | 3.02E-68 | -1.69E-46 |
| MS.gene053566 | MS.gene71704 | 0.815423 | 9.32E-52 | -1.69E-46 |
| MS.gene053581 | MS.gene71704 | 0.839054 | 1.99E-57 | -1.69E-46 |
| MS.gene053599 | MS.gene71704 | 0.831842 | 1.33E-55 | -1.69E-46 |
| MS.gene053883 | MS.gene71704 | 0.844689 | 6.47E-59 | -1.69E-46 |
| MS.gene053998 | MS.gene71704 | 0.828785 | 7.41E-55 | -1.69E-46 |
| MS.gene05415 | MS.gene71704 | 0.810003 | 1.43E-50 | -1.69E-46 |
| MS.gene054550 | MS.gene71704 | 0.827676 | 1.37E-54 | -1.69E-46 |
| MS.gene054584 | MS.gene71704 | 0.869112 | 3.95E-66 | -1.69E-46 |
| MS.gene054651 | MS.gene71704 | 0.827874 | 1.23E-54 | -1.69E-46 |
| MS.gene054775 | MS.gene71704 | 0.823643 | 1.24E-53 | -1.69E-46 |
| MS.gene054801 | MS.gene71704 | 0.803201 | 3.90E-49 | -1.69E-46 |
| MS.gene055357 | MS.gene71704 | 0.81186 | 5.67E-51 | -1.69E-46 |
| MS.gene055359 | MS.gene71704 | 0.80344 | 3.48E-49 | -1.69E-46 |
| MS.gene055465 | MS.gene71704 | 0.874692 | 5.54E-68 | -1.69E-46 |
| MS.gene055466 | MS.gene71704 | 0.880892 | 3.77E-70 | -1.69E-46 |
| MS.gene055467 | MS.gene71704 | 0.800977 | 1.12E-48 | -1.69E-46 |
| MS.gene055468 | MS.gene71704 | 0.858051 | 1.07E-62 | -1.69E-46 |
| MS.gene055469 | MS.gene71704 | 0.807713 | 4.42E-50 | -1.69E-46 |
| MS.gene055512 | MS.gene71704 | 0.827808 | 1.28E-54 | -1.69E-46 |
| MS.gene055537 | MS.gene71704 | 0.850417 | 1.72E-60 | -1.69E-46 |
| MS.gene055580 | MS.gene71704 | -0.846061 | 2.75E-59 | -1.69E-46 |
| MS.gene055778 | MS.gene71704 | 0.84897 | 4.36E-60 | -1.69E-46 |
| MS.gene055818 | MS.gene71704 | 0.832668 | 8.29E-56 | -1.69E-46 |
| MS.gene055890 | MS.gene71704 | 0.824479 | 7.89E-54 | -1.69E-46 |
| MS.gene055891 | MS.gene71704 | 0.805461 | 1.32E-49 | -1.69E-46 |
| MS.gene056005 | MS.gene71704 | 0.802141 | 6.46E-49 | -1.69E-46 |
| MS.gene056043 | MS.gene71704 | -0.813195 | 2.89E-51 | -1.69E-46 |
| MS.gene05604 | MS.gene71704 | 0.814584 | 1.43E-51 | -1.69E-46 |
| MS.gene056050 | MS.gene71704 | 0.814341 | 1.62E-51 | -1.69E-46 |
| MS.gene056173 | MS.gene71704 | 0.815089 | 1.10E-51 | -1.69E-46 |
| MS.gene056174 | MS.gene71704 | 0.813462 | 2.53E-51 | -1.69E-46 |
| MS.gene056215 | MS.gene71704 | 0.812736 | 3.65E-51 | -1.69E-46 |
| MS.gene056228 | MS.gene71704 | 0.824217 | 9.10E-54 | -1.69E-46 |
| MS.gene056308 | MS.gene71704 | 0.826866 | 2.14E-54 | -1.69E-46 |
| MS.gene056366 | MS.gene71704 | 0.844241 | 8.54E-59 | -1.69E-46 |
| MS.gene056498 | MS.gene71704 | 0.812044 | 5.17E-51 | -1.69E-46 |
| MS.gene056507 | MS.gene71704 | 0.807014 | 6.21E-50 | -1.69E-46 |
| MS.gene056542 | MS.gene71704 | 0.807754 | 4.33E-50 | -1.69E-46 |
| MS.gene056543 | MS.gene71704 | 0.813491 | 2.49E-51 | -1.69E-46 |
| MS.gene056545 | MS.gene71704 | 0.818087 | 2.35E-52 | -1.69E-46 |
| MS.gene056553 | MS.gene71704 | 0.843055 | 1.77E-58 | -1.69E-46 |
| MS.gene056643 | MS.gene71704 | 0.812989 | 3.21E-51 | -1.69E-46 |
| MS.gene056859 | MS.gene71704 | 0.808683 | 2.75E-50 | -1.69E-46 |
| MS.gene057027 | MS.gene71704 | 0.800706 | 1.27E-48 | -1.69E-46 |
| MS.gene057060 | MS.gene71704 | 0.816833 | 4.51E-52 | -1.69E-46 |
| MS.gene057314 | MS.gene71704 | 0.828654 | 7.97E-55 | -1.69E-46 |
| MS.gene057444 | MS.gene71704 | 0.850008 | 2.24E-60 | -1.69E-46 |
| MS.gene057446 | MS.gene71704 | 0.80742 | 5.10E-50 | -1.69E-46 |
| MS.gene057693 | MS.gene71704 | 0.80535 | 1.39E-49 | -1.69E-46 |
| MS.gene057915 | MS.gene71704 | 0.850948 | 1.22E-60 | -1.69E-46 |
| MS.gene058087 | MS.gene71704 | 0.808697 | 2.73E-50 | -1.69E-46 |
| MS.gene058168 | MS.gene71704 | 0.809455 | 1.88E-50 | -1.69E-46 |
| MS.gene05847 | MS.gene71704 | 0.809898 | 1.51E-50 | -1.69E-46 |
| MS.gene058625 | MS.gene71704 | 0.834469 | 2.94E-56 | -1.69E-46 |
| MS.gene058829 | MS.gene71704 | 0.800909 | 1.16E-48 | -1.69E-46 |
| MS.gene058979 | MS.gene71704 | 0.801534 | 8.61E-49 | -1.69E-46 |
| MS.gene059015 | MS.gene71704 | 0.839211 | 1.82E-57 | -1.69E-46 |
| MS.gene059084 | MS.gene71704 | 0.822388 | 2.43E-53 | -1.69E-46 |
| MS.gene059154 | MS.gene71704 | 0.8298 | 4.20E-55 | -1.69E-46 |
| MS.gene059272 | MS.gene71704 | 0.803634 | 3.17E-49 | -1.69E-46 |
| MS.gene05954 | MS.gene71704 | 0.812175 | 4.84E-51 | -1.69E-46 |
| MS.gene059625 | MS.gene71704 | 0.842723 | 2.17E-58 | -1.69E-46 |
| MS.gene059937 | MS.gene71704 | 0.829243 | 5.74E-55 | -1.69E-46 |
| MS.gene060194 | MS.gene71704 | 0.804305 | 2.30E-49 | -1.69E-46 |
| MS.gene060429 | MS.gene71704 | 0.850579 | 1.55E-60 | -1.69E-46 |
| MS.gene060519 | MS.gene71704 | 0.851177 | 1.05E-60 | -1.69E-46 |
| MS.gene060521 | MS.gene71704 | 0.828807 | 7.32E-55 | -1.69E-46 |
| MS.gene060587 | MS.gene71704 | 0.850387 | 1.75E-60 | -1.69E-46 |
| MS.gene060884 | MS.gene71704 | 0.821999 | 3.00E-53 | -1.69E-46 |
| MS.gene060886 | MS.gene71704 | 0.818235 | 2.18E-52 | -1.69E-46 |
| MS.gene061176 | MS.gene71704 | 0.839874 | 1.22E-57 | -1.69E-46 |
| MS.gene061177 | MS.gene71704 | 0.838358 | 3.02E-57 | -1.69E-46 |
| MS.gene061178 | MS.gene71704 | 0.839465 | 1.56E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71704.t1 | MTR_1g107565 | 93.860 | 228 | 11 | 1 | 78 | 305 | 150 | 374 | 7.46e-143 | 407 |
| MS.gene71704.t1 | MTR_1g107565 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 4.31e-47 | 162 |
| MS.gene71704.t1 | MTR_2g022250 | 70.130 | 77 | 20 | 1 | 1 | 77 | 1 | 74 | 1.68e-28 | 114 |
| MS.gene71704.t1 | MTR_4g117140 | 67.532 | 77 | 22 | 1 | 1 | 77 | 1 | 74 | 4.58e-27 | 110 |
| MS.gene71704.t1 | MTR_4g117220 | 67.532 | 77 | 22 | 1 | 1 | 77 | 1 | 74 | 6.53e-27 | 110 |
| MS.gene71704.t1 | MTR_1g082650 | 66.234 | 77 | 23 | 1 | 1 | 77 | 1 | 74 | 1.18e-26 | 110 |
| MS.gene71704.t1 | MTR_4g065780 | 87.273 | 55 | 7 | 0 | 201 | 255 | 31 | 85 | 1.38e-26 | 105 |
| MS.gene71704.t1 | MTR_7g108560 | 66.197 | 71 | 24 | 0 | 7 | 77 | 16 | 86 | 5.03e-25 | 102 |
| MS.gene71704.t1 | MTR_2g022240 | 63.636 | 77 | 25 | 1 | 1 | 77 | 1 | 74 | 2.46e-22 | 97.1 |
| MS.gene71704.t1 | MTR_7g113110 | 60.000 | 65 | 26 | 0 | 13 | 77 | 33 | 97 | 5.84e-20 | 89.4 |
| MS.gene71704.t1 | MTR_3g067750 | 57.576 | 66 | 28 | 0 | 10 | 75 | 9 | 74 | 7.14e-20 | 86.3 |
| MS.gene71704.t1 | MTR_4g119820 | 59.091 | 66 | 27 | 0 | 10 | 75 | 71 | 136 | 1.41e-19 | 88.2 |
| MS.gene71704.t1 | MTR_2g436830 | 61.765 | 68 | 26 | 0 | 10 | 77 | 12 | 79 | 1.04e-17 | 82.0 |
| MS.gene71704.t1 | MTR_1g083310 | 53.623 | 69 | 31 | 1 | 10 | 77 | 12 | 80 | 3.62e-16 | 78.6 |
| MS.gene71704.t1 | MTR_8g091420 | 37.190 | 121 | 70 | 3 | 14 | 129 | 30 | 149 | 5.70e-14 | 68.6 |
| MS.gene71704.t1 | MTR_3g087770 | 50.746 | 67 | 33 | 0 | 11 | 77 | 28 | 94 | 6.04e-14 | 68.6 |
| MS.gene71704.t1 | MTR_5g097550 | 56.452 | 62 | 26 | 1 | 15 | 75 | 15 | 76 | 1.93e-13 | 69.3 |
| MS.gene71704.t1 | MTR_1g030630 | 43.939 | 66 | 37 | 0 | 12 | 77 | 24 | 89 | 7.34e-13 | 65.5 |
| MS.gene71704.t1 | MTR_6g026890 | 37.705 | 61 | 38 | 0 | 17 | 77 | 20 | 80 | 6.66e-12 | 62.8 |
| MS.gene71704.t1 | MTR_5g025150 | 39.394 | 66 | 40 | 0 | 12 | 77 | 22 | 87 | 8.67e-12 | 62.4 |
| MS.gene71704.t1 | MTR_1g078090 | 38.889 | 72 | 44 | 0 | 10 | 81 | 50 | 121 | 1.16e-11 | 62.8 |
| MS.gene71704.t1 | MTR_1g092670 | 40.909 | 66 | 39 | 0 | 13 | 78 | 4 | 69 | 2.34e-11 | 59.3 |
| MS.gene71704.t1 | MTR_4g073040 | 39.437 | 71 | 42 | 1 | 8 | 77 | 23 | 93 | 5.74e-11 | 60.5 |
| MS.gene71704.t1 | MTR_2g091235 | 40.323 | 62 | 37 | 0 | 17 | 78 | 6 | 67 | 7.30e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71704.t1 | AT1G23000 | 60.714 | 112 | 43 | 1 | 1 | 112 | 1 | 111 | 6.74e-35 | 130 |
| MS.gene71704.t1 | AT1G23000 | 60.714 | 112 | 43 | 1 | 1 | 112 | 61 | 171 | 2.09e-34 | 129 |
| MS.gene71704.t1 | AT3G06130 | 72.727 | 77 | 18 | 1 | 1 | 77 | 1 | 74 | 9.90e-32 | 121 |
| MS.gene71704.t1 | AT3G06130 | 72.727 | 77 | 18 | 1 | 1 | 77 | 1 | 74 | 3.41e-31 | 122 |
| MS.gene71704.t1 | AT5G19090 | 71.429 | 77 | 19 | 1 | 1 | 77 | 1 | 74 | 3.24e-30 | 119 |
| MS.gene71704.t1 | AT5G19090 | 71.429 | 77 | 19 | 1 | 1 | 77 | 1 | 74 | 3.24e-30 | 119 |
| MS.gene71704.t1 | AT5G19090 | 71.429 | 77 | 19 | 1 | 1 | 77 | 1 | 74 | 9.02e-30 | 119 |
| MS.gene71704.t1 | AT5G19090 | 71.429 | 77 | 19 | 1 | 1 | 77 | 1 | 74 | 9.02e-30 | 119 |
| MS.gene71704.t1 | AT5G19090 | 71.429 | 77 | 19 | 1 | 1 | 77 | 1 | 74 | 9.02e-30 | 119 |
| MS.gene71704.t1 | AT3G05220 | 65.672 | 67 | 23 | 0 | 9 | 75 | 6 | 72 | 2.99e-24 | 103 |
| MS.gene71704.t1 | AT5G27690 | 52.703 | 74 | 34 | 1 | 5 | 77 | 21 | 94 | 8.39e-21 | 91.7 |
| MS.gene71704.t1 | AT5G37860 | 49.351 | 77 | 34 | 1 | 12 | 83 | 9 | 85 | 4.86e-18 | 82.4 |
| MS.gene71704.t1 | AT1G56210 | 57.143 | 63 | 27 | 0 | 13 | 75 | 40 | 102 | 2.04e-17 | 82.0 |
| MS.gene71704.t1 | AT1G06330 | 41.791 | 67 | 39 | 0 | 12 | 78 | 1 | 67 | 1.04e-12 | 65.1 |
| MS.gene71704.t1 | AT3G56891 | 42.623 | 61 | 35 | 0 | 17 | 77 | 20 | 80 | 1.64e-12 | 65.1 |
| MS.gene71704.t1 | AT3G56891 | 43.636 | 55 | 31 | 0 | 23 | 77 | 3 | 57 | 1.39e-11 | 62.0 |
| MS.gene71704.t1 | AT1G71050 | 40.909 | 66 | 39 | 0 | 12 | 77 | 27 | 92 | 3.08e-11 | 61.2 |
Find 65 sgRNAs with CRISPR-Local
Find 132 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCATAACCATGTTCTGATT+TGG | 0.207548 | 1.1:+77347387 | None:intergenic |
| CAGCAGAAGGTAACAGTTTC+AGG | 0.218037 | 1.1:-77347807 | MS.gene71704:CDS |
| TCATAACCATGTTCTGATTT+GGG | 0.272787 | 1.1:+77347388 | None:intergenic |
| GCTGGTAGTGCTACTGTTCT+AGG | 0.303996 | 1.1:-77347192 | MS.gene71704:CDS |
| TTAACATAGATGGTGGATAT+TGG | 0.307758 | 1.1:+77347094 | None:intergenic |
| ACCAATGTCACTCGCCCTTT+TGG | 0.321785 | 1.1:+77347260 | None:intergenic |
| GGTGGAAATTCCAATGGTTT+AGG | 0.330691 | 1.1:-77347171 | MS.gene71704:CDS |
| TTCATGTTCATTAACATAGA+TGG | 0.342463 | 1.1:+77347084 | None:intergenic |
| TTGTAATAATAGCCGGTATT+AGG | 0.353066 | 1.1:+77346961 | None:intergenic |
| CTTTAGCATCTGAAAATGAT+TGG | 0.354821 | 1.1:+77347497 | None:intergenic |
| GAAGTTGAACAATGCTCAAT+TGG | 0.375959 | 1.1:-77347322 | MS.gene71704:CDS |
| TTTGCATAGGAGTAATTTGC+AGG | 0.391852 | 1.1:+77346922 | None:intergenic |
| AAACTCCTTCAGAGAATTGA+AGG | 0.417205 | 1.1:-77348372 | MS.gene71704:intron |
| GTTATGAAGGAAGGTGCTAA+TGG | 0.420368 | 1.1:-77347372 | MS.gene71704:CDS |
| CCAGTAACAAAACCACCATT+TGG | 0.437509 | 1.1:+77347117 | None:intergenic |
| ATCAAGAAACTAGTAAGATC+TGG | 0.446205 | 1.1:-77347762 | MS.gene71704:CDS |
| CTTTAAGCTCCTTAAAATCC+AGG | 0.466184 | 1.1:-77348626 | MS.gene71704:intron |
| CAATGCTCAATTGGCTCAGT+TGG | 0.471941 | 1.1:-77347313 | MS.gene71704:CDS |
| AATGCTGGCAATGGAAATAG+TGG | 0.481459 | 1.1:-77347423 | MS.gene71704:CDS |
| AATGGAAATAGTGGCAAGAA+AGG | 0.499764 | 1.1:-77347414 | MS.gene71704:CDS |
| TCTATGTTAATGAACATGAA+TGG | 0.505347 | 1.1:-77347081 | MS.gene71704:CDS |
| TTATGAAGGAAGGTGCTAAT+GGG | 0.505662 | 1.1:-77347371 | MS.gene71704:CDS |
| AAATCAGAACATGGTTATGA+AGG | 0.507037 | 1.1:-77347385 | MS.gene71704:CDS |
| TTACATTATTGAACAGCTGC+TGG | 0.507630 | 1.1:+77346840 | None:intergenic |
| TCAACCTTGGAGAATCCAAA+AGG | 0.510252 | 1.1:-77347275 | MS.gene71704:CDS |
| TCCACTGCATCTATTCCAAA+TGG | 0.510572 | 1.1:-77347132 | MS.gene71704:CDS |
| ATTATAATTGTAATAATAGC+CGG | 0.512654 | 1.1:+77346954 | None:intergenic |
| TCCAAAAGGGCGAGTGACAT+TGG | 0.516238 | 1.1:-77347261 | MS.gene71704:CDS |
| GTTCTGCATCTATTTGAACT+TGG | 0.517770 | 1.1:+77347829 | None:intergenic |
| GGGAACAATAACAATGGTGC+TGG | 0.520248 | 1.1:-77347210 | MS.gene71704:CDS |
| GATGCAAACAATGTGAAGAA+AGG | 0.525694 | 1.1:-77347465 | MS.gene71704:CDS |
| CCGGTATTAGGAGGAACAAA+AGG | 0.531347 | 1.1:+77346973 | None:intergenic |
| GGTGCTATGATGAATTTAGC+TGG | 0.532345 | 1.1:-77347240 | MS.gene71704:CDS |
| GGAAATTCCAATGGTTTAGG+AGG | 0.533330 | 1.1:-77347168 | MS.gene71704:CDS |
| GCTCAATTGGCTCAGTTGGT+TGG | 0.533914 | 1.1:-77347309 | MS.gene71704:CDS |
| AGTGACCTTCAATTCTCTGA+AGG | 0.534789 | 1.1:+77348367 | None:intergenic |
| AAGATGAACAATGCTGGCAA+TGG | 0.540672 | 1.1:-77347432 | MS.gene71704:CDS |
| GTTCTAGGTGGAAATTCCAA+TGG | 0.542544 | 1.1:-77347177 | MS.gene71704:CDS |
| CATTGATGAACATGCAGGCA+AGG | 0.543733 | 1.1:-77347038 | MS.gene71704:CDS |
| AGCCTCAGATGATGTATCAC+AGG | 0.555215 | 1.1:-77346999 | MS.gene71704:CDS |
| CAGAACATGGTTATGAAGGA+AGG | 0.555580 | 1.1:-77347381 | MS.gene71704:CDS |
| ATCTTCATTGATGAACATGC+AGG | 0.556065 | 1.1:-77347043 | MS.gene71704:CDS |
| TGCATGTTCATCAATGAAGA+TGG | 0.558115 | 1.1:+77347045 | None:intergenic |
| TGCAAATGCTTGTTATCCAA+CGG | 0.566769 | 1.1:-77346905 | MS.gene71704:CDS |
| ATAGCTAAGATGAACAATGC+TGG | 0.570218 | 1.1:-77347438 | MS.gene71704:CDS |
| ATGTTCATTAACATAGATGG+TGG | 0.570507 | 1.1:+77347087 | None:intergenic |
| AGGAAAACCTCCTAAACCAT+TGG | 0.574088 | 1.1:+77347161 | None:intergenic |
| AATAGATGCAGAACAGCAGA+AGG | 0.582210 | 1.1:-77347820 | MS.gene71704:CDS |
| GGTAACAGTTTCAGGTAGTG+TGG | 0.582801 | 1.1:-77347799 | MS.gene71704:CDS |
| CAACCTTGGAGAATCCAAAA+GGG | 0.584061 | 1.1:-77347274 | MS.gene71704:CDS |
| ATAGATGCAGTGGATCCTGC+AGG | 0.590027 | 1.1:+77347141 | None:intergenic |
| TAATAATAGCCGGTATTAGG+AGG | 0.594611 | 1.1:+77346964 | None:intergenic |
| CTGGAAAATATGCTGAGCCC+TGG | 0.596330 | 1.1:-77347743 | MS.gene71704:intron |
| ACCATTTGGAATAGATGCAG+TGG | 0.604596 | 1.1:+77347131 | None:intergenic |
| TGGATAACAAGCATTTGCAT+AGG | 0.605903 | 1.1:+77346909 | None:intergenic |
| ACTGCATCTATTCCAAATGG+TGG | 0.607866 | 1.1:-77347129 | MS.gene71704:CDS |
| GGTAATGAAAGTCTCAACCT+TGG | 0.624155 | 1.1:-77347288 | MS.gene71704:CDS |
| TTTAATGGGAACAATAACAA+TGG | 0.630005 | 1.1:-77347216 | MS.gene71704:CDS |
| AAAGTGAACATTCACTGTGA+TGG | 0.643761 | 1.1:-77348414 | MS.gene71704:CDS |
| AGGAAACCCAAATCAGAACA+TGG | 0.652284 | 1.1:-77347394 | MS.gene71704:CDS |
| TGGGATTGAGCAGAAAACAA+TGG | 0.655937 | 1.1:-77347352 | MS.gene71704:CDS |
| TGTTCATCAATGAAGATGGA+TGG | 0.664920 | 1.1:+77347049 | None:intergenic |
| GCTGCAGAGTGATCATCCGT+TGG | 0.673460 | 1.1:+77346889 | None:intergenic |
| GACCTGTGATACATCATCTG+AGG | 0.691567 | 1.1:+77346997 | None:intergenic |
| GGTAGTGCTACTGTTCTAGG+TGG | 0.717323 | 1.1:-77347189 | MS.gene71704:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTTTTTAATTTTTTT+TGG | - | chr1.1:77347583-77347602 | MS.gene71704:intron | 0.0% |
| !! | AACTAAACTAAAATAATAGA+AGG | + | chr1.1:77346966-77346985 | None:intergenic | 15.0% |
| !! | ACTAAACTAAAATAATAGAA+GGG | + | chr1.1:77346965-77346984 | None:intergenic | 15.0% |
| !! | ATTATAATTGTAATAATAGC+CGG | + | chr1.1:77348532-77348551 | None:intergenic | 15.0% |
| !! | TAAAAAAAAGACCAAATATT+AGG | + | chr1.1:77346990-77347009 | None:intergenic | 15.0% |
| !! | TTTATGGATAATGTTAATAA+GGG | + | chr1.1:77346895-77346914 | None:intergenic | 15.0% |
| !!! | TTTTATGGATAATGTTAATA+AGG | + | chr1.1:77346896-77346915 | None:intergenic | 15.0% |
| !! | TGAATATTATGAATATGATG+AGG | - | chr1.1:77347918-77347937 | MS.gene71704:intron | 20.0% |
| !! | TTATGGATAATGTTAATAAG+GGG | + | chr1.1:77346894-77346913 | None:intergenic | 20.0% |
| !! | TTTCTTGAAGTTAAAATGTA+CGG | - | chr1.1:77347212-77347231 | MS.gene71704:CDS | 20.0% |
| !!! | ATTTTAACTTCAAGAAAACA+AGG | + | chr1.1:77347209-77347228 | None:intergenic | 20.0% |
| !!! | TAGTTTAGTTTCCTAATATT+TGG | - | chr1.1:77346976-77346995 | MS.gene71704:CDS | 20.0% |
| ! | ACTATATGGATATGGTTAAT+TGG | - | chr1.1:77347555-77347574 | MS.gene71704:intron | 25.0% |
| ! | ATAATATTCATCATCCTCTT+CGG | + | chr1.1:77347908-77347927 | None:intergenic | 25.0% |
| ! | TAAAATAATAGAAGGGAGAA+GGG | + | chr1.1:77346958-77346977 | None:intergenic | 25.0% |
| ! | TAAACACCTATAGAACAAAA+GGG | + | chr1.1:77347634-77347653 | None:intergenic | 25.0% |
| ! | TCTATGTTAATGAACATGAA+TGG | - | chr1.1:77348402-77348421 | MS.gene71704:CDS | 25.0% |
| ! | TTAAAGGGAGACATAAAAAA+TGG | - | chr1.1:77347355-77347374 | MS.gene71704:CDS | 25.0% |
| ! | TTCATGTTCATTAACATAGA+TGG | + | chr1.1:77348402-77348421 | None:intergenic | 25.0% |
| ! | TTTAATGGGAACAATAACAA+TGG | - | chr1.1:77348267-77348286 | MS.gene71704:intron | 25.0% |
| !! | TTTAGTTTACTCACAATGAT+GGG | - | chr1.1:77347309-77347328 | MS.gene71704:CDS | 25.0% |
| !!! | AGCATGTTGTTTTAGTTTTA+TGG | + | chr1.1:77346911-77346930 | None:intergenic | 25.0% |
| !!! | ATGAATTTAGCTGGTTTTAA+TGG | - | chr1.1:77348252-77348271 | MS.gene71704:intron | 25.0% |
| !!! | TGAATTTAGCTGGTTTTAAT+GGG | - | chr1.1:77348253-77348272 | MS.gene71704:intron | 25.0% |
| AAAATAATAGAAGGGAGAAG+GGG | + | chr1.1:77346957-77346976 | None:intergenic | 30.0% | |
| AAATCAGAACATGGTTATGA+AGG | - | chr1.1:77348098-77348117 | MS.gene71704:intron | 30.0% | |
| AAGAACAAAGGACAAAAACA+AGG | - | chr1.1:77347826-77347845 | MS.gene71704:CDS | 30.0% | |
| ATACCTTAGTGTACACTATA+TGG | - | chr1.1:77347541-77347560 | MS.gene71704:intron | 30.0% | |
| ATCAAGAAACTAGTAAGATC+TGG | - | chr1.1:77347721-77347740 | MS.gene71704:intron | 30.0% | |
| ATGTTCATTAACATAGATGG+TGG | + | chr1.1:77348399-77348418 | None:intergenic | 30.0% | |
| CAAAAATCAGCAGAAATTTC+CGG | - | chr1.1:77347873-77347892 | MS.gene71704:intron | 30.0% | |
| CTAAAATAATAGAAGGGAGA+AGG | + | chr1.1:77346959-77346978 | None:intergenic | 30.0% | |
| CTTTAGCATCTGAAAATGAT+TGG | + | chr1.1:77347989-77348008 | None:intergenic | 30.0% | |
| GTAAACACCTATAGAACAAA+AGG | + | chr1.1:77347635-77347654 | None:intergenic | 30.0% | |
| TAACTCCCATGACTTATAAA+AGG | + | chr1.1:77347338-77347357 | None:intergenic | 30.0% | |
| TAGTGTACACTATATGGATA+TGG | - | chr1.1:77347547-77347566 | MS.gene71704:intron | 30.0% | |
| TATAAGTCATGGGAGTTAAA+GGG | - | chr1.1:77347340-77347359 | MS.gene71704:CDS | 30.0% | |
| TATCCATATAGTGTACACTA+AGG | + | chr1.1:77347547-77347566 | None:intergenic | 30.0% | |
| TCATAACCATGTTCTGATTT+GGG | + | chr1.1:77348098-77348117 | None:intergenic | 30.0% | |
| TTAGTTTACTCACAATGATG+GGG | - | chr1.1:77347310-77347329 | MS.gene71704:CDS | 30.0% | |
| TTATAAGTCATGGGAGTTAA+AGG | - | chr1.1:77347339-77347358 | MS.gene71704:CDS | 30.0% | |
| TTATGAATATGATGAGGAAG+AGG | - | chr1.1:77347924-77347943 | MS.gene71704:intron | 30.0% | |
| TTCATAACCATGTTCTGATT+TGG | + | chr1.1:77348099-77348118 | None:intergenic | 30.0% | |
| TTGTAATAATAGCCGGTATT+AGG | + | chr1.1:77348525-77348544 | None:intergenic | 30.0% | |
| ! | GTTTAGTTTACTCACAATGA+TGG | - | chr1.1:77347308-77347327 | MS.gene71704:CDS | 30.0% |
| ! | TTTTGACCCTTTTGTTCTAT+AGG | - | chr1.1:77347625-77347644 | MS.gene71704:intron | 30.0% |
| !! | CTTTTGATTCTGATTGTTGT+TGG | + | chr1.1:77347776-77347795 | None:intergenic | 30.0% |
| !! | TTAACATAGATGGTGGATAT+TGG | + | chr1.1:77348392-77348411 | None:intergenic | 30.0% |
| !!! | GCTACTTTTTAAATCTTCAG+TGG | - | chr1.1:77347431-77347450 | MS.gene71704:CDS | 30.0% |
| !!! | TTAATTTTTTTTGGCGTGCT+TGG | - | chr1.1:77347592-77347611 | MS.gene71704:intron | 30.0% |
| AAACTCCTTCAGAGAATTGA+AGG | - | chr1.1:77347111-77347130 | MS.gene71704:CDS | 35.0% | |
| AAAGTGAACATTCACTGTGA+TGG | - | chr1.1:77347069-77347088 | MS.gene71704:CDS | 35.0% | |
| AAATAATAGAAGGGAGAAGG+GGG | + | chr1.1:77346956-77346975 | None:intergenic | 35.0% | |
| AAATCTTCAGTGGAAAGCTT+AGG | - | chr1.1:77347441-77347460 | MS.gene71704:CDS | 35.0% | |
| AATGGAAATAGTGGCAAGAA+AGG | - | chr1.1:77348069-77348088 | MS.gene71704:intron | 35.0% | |
| ATAGCTAAGATGAACAATGC+TGG | - | chr1.1:77348045-77348064 | MS.gene71704:intron | 35.0% | |
| ATCTTCATTGATGAACATGC+AGG | - | chr1.1:77348440-77348459 | MS.gene71704:intron | 35.0% | |
| ATGTTAATAAGGGGAGAAAG+AGG | + | chr1.1:77346885-77346904 | None:intergenic | 35.0% | |
| CTTTAAGCTCCTTAAAATCC+AGG | - | chr1.1:77346857-77346876 | MS.gene71704:CDS | 35.0% | |
| GAAGTTGAACAATGCTCAAT+TGG | - | chr1.1:77348161-77348180 | MS.gene71704:intron | 35.0% | |
| GATGCAAACAATGTGAAGAA+AGG | - | chr1.1:77348018-77348037 | MS.gene71704:intron | 35.0% | |
| GTCAAAGATGACAAGAACAA+AGG | - | chr1.1:77347814-77347833 | MS.gene71704:CDS | 35.0% | |
| GTTCTGCATCTATTTGAACT+TGG | + | chr1.1:77347657-77347676 | None:intergenic | 35.0% | |
| TAATAATAGCCGGTATTAGG+AGG | + | chr1.1:77348522-77348541 | None:intergenic | 35.0% | |
| TGCATGTTCATCAATGAAGA+TGG | + | chr1.1:77348441-77348460 | None:intergenic | 35.0% | |
| TGGAAAGCTTAGGCTATAAA+AGG | - | chr1.1:77347451-77347470 | MS.gene71704:CDS | 35.0% | |
| TGGATAACAAGCATTTGCAT+AGG | + | chr1.1:77348577-77348596 | None:intergenic | 35.0% | |
| TGTTCATCAATGAAGATGGA+TGG | + | chr1.1:77348437-77348456 | None:intergenic | 35.0% | |
| TTACATTATTGAACAGCTGC+TGG | + | chr1.1:77348646-77348665 | None:intergenic | 35.0% | |
| ! | GGGTTCCTTTTATAAGTCAT+GGG | - | chr1.1:77347330-77347349 | MS.gene71704:CDS | 35.0% |
| ! | TTTGCATAGGAGTAATTTGC+AGG | + | chr1.1:77348564-77348583 | None:intergenic | 35.0% |
| !! | AAAAACAAGGACTGGTCAAA+GGG | - | chr1.1:77347839-77347858 | MS.gene71704:CDS | 35.0% |
| !! | AACTGTTTTGTTGCAACAAG+TGG | - | chr1.1:77347397-77347416 | MS.gene71704:CDS | 35.0% |
| !! | TGCAAATGCTTGTTATCCAA+CGG | - | chr1.1:77348578-77348597 | MS.gene71704:intron | 35.0% |
| !! | TTATGAAGGAAGGTGCTAAT+GGG | - | chr1.1:77348112-77348131 | MS.gene71704:intron | 35.0% |
| !!! | AAAGAGGTACCTGGATTTTA+AGG | + | chr1.1:77346869-77346888 | None:intergenic | 35.0% |
| AAGATGAACAATGCTGGCAA+TGG | - | chr1.1:77348051-77348070 | MS.gene71704:intron | 40.0% | |
| AATAATAGAAGGGAGAAGGG+GGG | + | chr1.1:77346955-77346974 | None:intergenic | 40.0% | |
| AATAGATGCAGAACAGCAGA+AGG | - | chr1.1:77347663-77347682 | MS.gene71704:intron | 40.0% | |
| AATGCTGGCAATGGAAATAG+TGG | - | chr1.1:77348060-77348079 | MS.gene71704:intron | 40.0% | |
| ACTGCATCTATTCCAAATGG+TGG | - | chr1.1:77348354-77348373 | MS.gene71704:intron | 40.0% | |
| AGGAAAACCTCCTAAACCAT+TGG | + | chr1.1:77348325-77348344 | None:intergenic | 40.0% | |
| AGGAAACCCAAATCAGAACA+TGG | - | chr1.1:77348089-77348108 | MS.gene71704:intron | 40.0% | |
| AGTGACCTTCAATTCTCTGA+AGG | + | chr1.1:77347119-77347138 | None:intergenic | 40.0% | |
| CAAAGGACAAAAACAAGGAC+TGG | - | chr1.1:77347831-77347850 | MS.gene71704:CDS | 40.0% | |
| CAACCTTGGAGAATCCAAAA+GGG | - | chr1.1:77348209-77348228 | MS.gene71704:intron | 40.0% | |
| CAGAACATGGTTATGAAGGA+AGG | - | chr1.1:77348102-77348121 | MS.gene71704:intron | 40.0% | |
| CCAGTAACAAAACCACCATT+TGG | + | chr1.1:77348369-77348388 | None:intergenic | 40.0% | |
| GGAAATTCCAATGGTTTAGG+AGG | - | chr1.1:77348315-77348334 | MS.gene71704:intron | 40.0% | |
| GGTAATGAAAGTCTCAACCT+TGG | - | chr1.1:77348195-77348214 | MS.gene71704:intron | 40.0% | |
| GGTGGAAATTCCAATGGTTT+AGG | - | chr1.1:77348312-77348331 | MS.gene71704:intron | 40.0% | |
| TCAACCTTGGAGAATCCAAA+AGG | - | chr1.1:77348208-77348227 | MS.gene71704:intron | 40.0% | |
| TCCACTGCATCTATTCCAAA+TGG | - | chr1.1:77348351-77348370 | MS.gene71704:intron | 40.0% | |
| TGAATATGATGAGGAAGAGG+AGG | - | chr1.1:77347927-77347946 | MS.gene71704:intron | 40.0% | |
| TGGGATTGAGCAGAAAACAA+TGG | - | chr1.1:77348131-77348150 | MS.gene71704:intron | 40.0% | |
| ! | ACCATTTGGAATAGATGCAG+TGG | + | chr1.1:77348355-77348374 | None:intergenic | 40.0% |
| ! | CCTTTTGTTCCTCCTAATAC+CGG | - | chr1.1:77348510-77348529 | MS.gene71704:intron | 40.0% |
| ! | GGGGTTCCTTTTATAAGTCA+TGG | - | chr1.1:77347329-77347348 | MS.gene71704:CDS | 40.0% |
| ! | GGTGCTATGATGAATTTAGC+TGG | - | chr1.1:77348243-77348262 | MS.gene71704:intron | 40.0% |
| ! | GTTCTAGGTGGAAATTCCAA+TGG | - | chr1.1:77348306-77348325 | MS.gene71704:intron | 40.0% |
| !! | CAAAAACAAGGACTGGTCAA+AGG | - | chr1.1:77347838-77347857 | MS.gene71704:CDS | 40.0% |
| !! | GTTATGAAGGAAGGTGCTAA+TGG | - | chr1.1:77348111-77348130 | MS.gene71704:intron | 40.0% |
| !!! | CCAAATGGTGGTTTTGTTAC+TGG | - | chr1.1:77348366-77348385 | MS.gene71704:intron | 40.0% |
| !!! | TTGTTGGTTTTCTGAGACCA+GGG | + | chr1.1:77347760-77347779 | None:intergenic | 40.0% |
| AGCCTCAGATGATGTATCAC+AGG | - | chr1.1:77348484-77348503 | MS.gene71704:intron | 45.0% | |
| ATATGATGAGGAAGAGGAGG+AGG | - | chr1.1:77347930-77347949 | MS.gene71704:intron | 45.0% | |
| ATGAAGAGATGCGGTTCATC+AGG | - | chr1.1:77347956-77347975 | MS.gene71704:intron | 45.0% | |
| CAGCAGAAGGTAACAGTTTC+AGG | - | chr1.1:77347676-77347695 | MS.gene71704:intron | 45.0% | |
| CATTGATGAACATGCAGGCA+AGG | - | chr1.1:77348445-77348464 | MS.gene71704:intron | 45.0% | |
| CCGGTATTAGGAGGAACAAA+AGG | + | chr1.1:77348513-77348532 | None:intergenic | 45.0% | |
| GACCTGTGATACATCATCTG+AGG | + | chr1.1:77348489-77348508 | None:intergenic | 45.0% | |
| GGGAACAATAACAATGGTGC+TGG | - | chr1.1:77348273-77348292 | MS.gene71704:intron | 45.0% | |
| TCCTCTTCGGAACTAAAAGC+CGG | + | chr1.1:77347895-77347914 | None:intergenic | 45.0% | |
| TGAAGAGATGCGGTTCATCA+GGG | - | chr1.1:77347957-77347976 | MS.gene71704:intron | 45.0% | |
| ! | CAATGCTCAATTGGCTCAGT+TGG | - | chr1.1:77348170-77348189 | MS.gene71704:intron | 45.0% |
| ! | GGTAACAGTTTCAGGTAGTG+TGG | - | chr1.1:77347684-77347703 | MS.gene71704:intron | 45.0% |
| !!! | GTTGTTGGTTTTCTGAGACC+AGG | + | chr1.1:77347761-77347780 | None:intergenic | 45.0% |
| !!! | TATATATTTTTAAGAAAAAA+AGG | + | chr1.1:77347497-77347516 | None:intergenic | 5.0% |
| AGGAGGAGGATGAAGAGATG+CGG | - | chr1.1:77347947-77347966 | MS.gene71704:intron | 50.0% | |
| ATAGATGCAGTGGATCCTGC+AGG | + | chr1.1:77348345-77348364 | None:intergenic | 50.0% | |
| CTGGAAAATATGCTGAGCCC+TGG | - | chr1.1:77347740-77347759 | MS.gene71704:intron | 50.0% | |
| TCCAAAAGGGCGAGTGACAT+TGG | - | chr1.1:77348222-77348241 | MS.gene71704:intron | 50.0% | |
| ! | ACCAATGTCACTCGCCCTTT+TGG | + | chr1.1:77348226-77348245 | None:intergenic | 50.0% |
| ! | GCTCAATTGGCTCAGTTGGT+TGG | - | chr1.1:77348174-77348193 | MS.gene71704:intron | 50.0% |
| ! | GCTGGTAGTGCTACTGTTCT+AGG | - | chr1.1:77348291-77348310 | MS.gene71704:intron | 50.0% |
| ! | GGTAGTGCTACTGTTCTAGG+TGG | - | chr1.1:77348294-77348313 | MS.gene71704:intron | 50.0% |
| ! | GGTTTAGGAGGTTTTCCTGC+AGG | - | chr1.1:77348327-77348346 | MS.gene71704:intron | 50.0% |
| ! | TCGCCCTTTTGGATTCTCCA+AGG | + | chr1.1:77348215-77348234 | None:intergenic | 50.0% |
| !! | TAAGGGGAGAAAGAGGTACC+TGG | + | chr1.1:77346878-77346897 | None:intergenic | 50.0% |
| !!! | TCCGGCTTTTAGTTCCGAAG+AGG | - | chr1.1:77347891-77347910 | MS.gene71704:intron | 50.0% |
| GCTGCAGAGTGATCATCCGT+TGG | + | chr1.1:77348597-77348616 | None:intergenic | 55.0% | |
| TGATGAGGAAGAGGAGGAGG+AGG | - | chr1.1:77347933-77347952 | MS.gene71704:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 77346840 | 77348665 | 77346840 | ID=MS.gene71704 |
| chr1.1 | mRNA | 77346840 | 77348665 | 77346840 | ID=MS.gene71704.t1;Parent=MS.gene71704 |
| chr1.1 | exon | 77348627 | 77348665 | 77348627 | ID=MS.gene71704.t1.exon1;Parent=MS.gene71704.t1 |
| chr1.1 | CDS | 77348627 | 77348665 | 77348627 | ID=cds.MS.gene71704.t1;Parent=MS.gene71704.t1 |
| chr1.1 | exon | 77348373 | 77348448 | 77348373 | ID=MS.gene71704.t1.exon2;Parent=MS.gene71704.t1 |
| chr1.1 | CDS | 77348373 | 77348448 | 77348373 | ID=cds.MS.gene71704.t1;Parent=MS.gene71704.t1 |
| chr1.1 | exon | 77347744 | 77347858 | 77347744 | ID=MS.gene71704.t1.exon3;Parent=MS.gene71704.t1 |
| chr1.1 | CDS | 77347744 | 77347858 | 77347744 | ID=cds.MS.gene71704.t1;Parent=MS.gene71704.t1 |
| chr1.1 | exon | 77346840 | 77347527 | 77346840 | ID=MS.gene71704.t1.exon4;Parent=MS.gene71704.t1 |
| chr1.1 | CDS | 77346840 | 77347527 | 77346840 | ID=cds.MS.gene71704.t1;Parent=MS.gene71704.t1 |
| Gene Sequence |
| Protein sequence |
