Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74758.t1 | ACZ37068.1 | 95.4 | 131 | 6 | 0 | 1 | 131 | 1 | 131 | 8.90E-62 | 246.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74758.t1 | Q38879 | 59.4 | 133 | 52 | 1 | 1 | 131 | 1 | 133 | 3.1e-39 | 162.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74758.t1 | D8L5D9 | 95.4 | 131 | 6 | 0 | 1 | 131 | 1 | 131 | 6.4e-62 | 246.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04918 | MS.gene74758 | 0.811391 | 7.17E-51 | -1.69E-46 |
| MS.gene049254 | MS.gene74758 | 0.878707 | 2.26E-69 | -1.69E-46 |
| MS.gene049404 | MS.gene74758 | 0.855524 | 5.96E-62 | -1.69E-46 |
| MS.gene049452 | MS.gene74758 | 0.807824 | 4.19E-50 | -1.69E-46 |
| MS.gene049711 | MS.gene74758 | 0.847261 | 1.29E-59 | -1.69E-46 |
| MS.gene049807 | MS.gene74758 | 0.82191 | 3.14E-53 | -1.69E-46 |
| MS.gene049821 | MS.gene74758 | 0.81575 | 7.88E-52 | -1.69E-46 |
| MS.gene049824 | MS.gene74758 | 0.800323 | 1.52E-48 | -1.69E-46 |
| MS.gene049825 | MS.gene74758 | 0.813166 | 2.94E-51 | -1.69E-46 |
| MS.gene049850 | MS.gene74758 | 0.800817 | 1.21E-48 | -1.69E-46 |
| MS.gene049873 | MS.gene74758 | 0.833063 | 6.61E-56 | -1.69E-46 |
| MS.gene049983 | MS.gene74758 | 0.808091 | 3.67E-50 | -1.69E-46 |
| MS.gene050026 | MS.gene74758 | 0.817519 | 3.16E-52 | -1.69E-46 |
| MS.gene050237 | MS.gene74758 | 0.805404 | 1.36E-49 | -1.69E-46 |
| MS.gene050273 | MS.gene74758 | 0.851738 | 7.30E-61 | -1.69E-46 |
| MS.gene050559 | MS.gene74758 | 0.886838 | 2.41E-72 | -1.69E-46 |
| MS.gene050561 | MS.gene74758 | 0.878 | 4.00E-69 | -1.69E-46 |
| MS.gene050562 | MS.gene74758 | 0.87043 | 1.47E-66 | -1.69E-46 |
| MS.gene050759 | MS.gene74758 | 0.813182 | 2.91E-51 | -1.69E-46 |
| MS.gene050807 | MS.gene74758 | 0.806237 | 9.07E-50 | -1.69E-46 |
| MS.gene050901 | MS.gene74758 | 0.807728 | 4.39E-50 | -1.69E-46 |
| MS.gene050962 | MS.gene74758 | 0.802818 | 4.68E-49 | -1.69E-46 |
| MS.gene051181 | MS.gene74758 | 0.816473 | 5.43E-52 | -1.69E-46 |
| MS.gene051198 | MS.gene74758 | 0.844875 | 5.76E-59 | -1.69E-46 |
| MS.gene051247 | MS.gene74758 | 0.820654 | 6.12E-53 | -1.69E-46 |
| MS.gene051279 | MS.gene74758 | 0.877191 | 7.66E-69 | -1.69E-46 |
| MS.gene051575 | MS.gene74758 | 0.801355 | 9.36E-49 | -1.69E-46 |
| MS.gene051594 | MS.gene74758 | 0.803931 | 2.75E-49 | -1.69E-46 |
| MS.gene051719 | MS.gene74758 | 0.803426 | 3.51E-49 | -1.69E-46 |
| MS.gene051720 | MS.gene74758 | 0.823522 | 1.32E-53 | -1.69E-46 |
| MS.gene051744 | MS.gene74758 | 0.886527 | 3.17E-72 | -1.69E-46 |
| MS.gene051832 | MS.gene74758 | 0.801178 | 1.02E-48 | -1.69E-46 |
| MS.gene05191 | MS.gene74758 | 0.8045 | 2.10E-49 | -1.69E-46 |
| MS.gene051957 | MS.gene74758 | 0.818417 | 1.98E-52 | -1.69E-46 |
| MS.gene052037 | MS.gene74758 | 0.824371 | 8.37E-54 | -1.69E-46 |
| MS.gene052133 | MS.gene74758 | 0.804137 | 2.50E-49 | -1.69E-46 |
| MS.gene052208 | MS.gene74758 | 0.821925 | 3.11E-53 | -1.69E-46 |
| MS.gene052239 | MS.gene74758 | -0.854618 | 1.09E-61 | -1.69E-46 |
| MS.gene052516 | MS.gene74758 | 0.83513 | 2.01E-56 | -1.69E-46 |
| MS.gene052519 | MS.gene74758 | 0.834064 | 3.72E-56 | -1.69E-46 |
| MS.gene052582 | MS.gene74758 | 0.852654 | 4.01E-61 | -1.69E-46 |
| MS.gene052584 | MS.gene74758 | 0.854269 | 1.38E-61 | -1.69E-46 |
| MS.gene052616 | MS.gene74758 | 0.809982 | 1.45E-50 | -1.69E-46 |
| MS.gene052628 | MS.gene74758 | 0.806999 | 6.26E-50 | -1.69E-46 |
| MS.gene052773 | MS.gene74758 | 0.801827 | 7.49E-49 | -1.69E-46 |
| MS.gene052867 | MS.gene74758 | 0.805157 | 1.53E-49 | -1.69E-46 |
| MS.gene053006 | MS.gene74758 | 0.840998 | 6.20E-58 | -1.69E-46 |
| MS.gene053079 | MS.gene74758 | 0.825258 | 5.17E-54 | -1.69E-46 |
| MS.gene053122 | MS.gene74758 | 0.808204 | 3.47E-50 | -1.69E-46 |
| MS.gene053144 | MS.gene74758 | 0.812959 | 3.26E-51 | -1.69E-46 |
| MS.gene053154 | MS.gene74758 | 0.808813 | 2.58E-50 | -1.69E-46 |
| MS.gene053226 | MS.gene74758 | 0.861898 | 7.42E-64 | -1.69E-46 |
| MS.gene053575 | MS.gene74758 | 0.820366 | 7.12E-53 | -1.69E-46 |
| MS.gene053581 | MS.gene74758 | 0.801355 | 9.36E-49 | -1.69E-46 |
| MS.gene053599 | MS.gene74758 | 0.809617 | 1.73E-50 | -1.69E-46 |
| MS.gene05364 | MS.gene74758 | 0.832779 | 7.78E-56 | -1.69E-46 |
| MS.gene053678 | MS.gene74758 | 0.800806 | 1.21E-48 | -1.69E-46 |
| MS.gene053883 | MS.gene74758 | 0.817131 | 3.87E-52 | -1.69E-46 |
| MS.gene053931 | MS.gene74758 | 0.846893 | 1.63E-59 | -1.69E-46 |
| MS.gene053995 | MS.gene74758 | 0.816092 | 6.61E-52 | -1.69E-46 |
| MS.gene05410 | MS.gene74758 | 0.809071 | 2.27E-50 | -1.69E-46 |
| MS.gene05414 | MS.gene74758 | 0.802294 | 6.01E-49 | -1.69E-46 |
| MS.gene05415 | MS.gene74758 | 0.839568 | 1.47E-57 | -1.69E-46 |
| MS.gene054222 | MS.gene74758 | 0.800925 | 1.15E-48 | -1.69E-46 |
| MS.gene05423 | MS.gene74758 | 0.812204 | 4.77E-51 | -1.69E-46 |
| MS.gene054576 | MS.gene74758 | 0.812964 | 3.25E-51 | -1.69E-46 |
| MS.gene054584 | MS.gene74758 | 0.8081 | 3.66E-50 | -1.69E-46 |
| MS.gene054651 | MS.gene74758 | 0.881679 | 1.96E-70 | -1.69E-46 |
| MS.gene054775 | MS.gene74758 | 0.806937 | 6.45E-50 | -1.69E-46 |
| MS.gene055228 | MS.gene74758 | 0.81535 | 9.67E-52 | -1.69E-46 |
| MS.gene055464 | MS.gene74758 | 0.81509 | 1.10E-51 | -1.69E-46 |
| MS.gene055466 | MS.gene74758 | 0.817467 | 3.25E-52 | -1.69E-46 |
| MS.gene055580 | MS.gene74758 | -0.813463 | 2.53E-51 | -1.69E-46 |
| MS.gene055586 | MS.gene74758 | 0.821677 | 3.55E-53 | -1.69E-46 |
| MS.gene055589 | MS.gene74758 | 0.820076 | 8.30E-53 | -1.69E-46 |
| MS.gene055724 | MS.gene74758 | 0.806355 | 8.56E-50 | -1.69E-46 |
| MS.gene055778 | MS.gene74758 | 0.829381 | 5.31E-55 | -1.69E-46 |
| MS.gene055808 | MS.gene74758 | 0.818687 | 1.72E-52 | -1.69E-46 |
| MS.gene055818 | MS.gene74758 | 0.825177 | 5.40E-54 | -1.69E-46 |
| MS.gene055841 | MS.gene74758 | 0.826554 | 2.55E-54 | -1.69E-46 |
| MS.gene056050 | MS.gene74758 | 0.831041 | 2.09E-55 | -1.69E-46 |
| MS.gene056174 | MS.gene74758 | 0.844387 | 7.80E-59 | -1.69E-46 |
| MS.gene056215 | MS.gene74758 | 0.812689 | 3.74E-51 | -1.69E-46 |
| MS.gene056308 | MS.gene74758 | 0.800081 | 1.70E-48 | -1.69E-46 |
| MS.gene056366 | MS.gene74758 | 0.837011 | 6.69E-57 | -1.69E-46 |
| MS.gene056498 | MS.gene74758 | 0.809141 | 2.19E-50 | -1.69E-46 |
| MS.gene056595 | MS.gene74758 | 0.816036 | 6.80E-52 | -1.69E-46 |
| MS.gene056677 | MS.gene74758 | 0.828838 | 7.19E-55 | -1.69E-46 |
| MS.gene056699 | MS.gene74758 | 0.834088 | 3.67E-56 | -1.69E-46 |
| MS.gene056776 | MS.gene74758 | 0.815573 | 8.63E-52 | -1.69E-46 |
| MS.gene05686 | MS.gene74758 | 0.862348 | 5.40E-64 | -1.69E-46 |
| MS.gene05690 | MS.gene74758 | 0.837035 | 6.59E-57 | -1.69E-46 |
| MS.gene057034 | MS.gene74758 | 0.815769 | 7.80E-52 | -1.69E-46 |
| MS.gene057060 | MS.gene74758 | 0.818286 | 2.12E-52 | -1.69E-46 |
| MS.gene057102 | MS.gene74758 | 0.831278 | 1.83E-55 | -1.69E-46 |
| MS.gene057208 | MS.gene74758 | 0.854625 | 1.09E-61 | -1.69E-46 |
| MS.gene057314 | MS.gene74758 | 0.829874 | 4.03E-55 | -1.69E-46 |
| MS.gene057444 | MS.gene74758 | 0.85853 | 7.73E-63 | -1.69E-46 |
| MS.gene057693 | MS.gene74758 | 0.808629 | 2.82E-50 | -1.69E-46 |
| MS.gene057705 | MS.gene74758 | 0.844956 | 5.48E-59 | -1.69E-46 |
| MS.gene057869 | MS.gene74758 | 0.804008 | 2.65E-49 | -1.69E-46 |
| MS.gene058008 | MS.gene74758 | 0.826823 | 2.20E-54 | -1.69E-46 |
| MS.gene058009 | MS.gene74758 | 0.831089 | 2.03E-55 | -1.69E-46 |
| MS.gene058010 | MS.gene74758 | 0.8429 | 1.95E-58 | -1.69E-46 |
| MS.gene058037 | MS.gene74758 | 0.833511 | 5.11E-56 | -1.69E-46 |
| MS.gene058279 | MS.gene74758 | 0.809549 | 1.79E-50 | -1.69E-46 |
| MS.gene058294 | MS.gene74758 | 0.810304 | 1.23E-50 | -1.69E-46 |
| MS.gene05847 | MS.gene74758 | 0.818772 | 1.65E-52 | -1.69E-46 |
| MS.gene058625 | MS.gene74758 | 0.83537 | 1.75E-56 | -1.69E-46 |
| MS.gene058635 | MS.gene74758 | 0.801039 | 1.09E-48 | -1.69E-46 |
| MS.gene058781 | MS.gene74758 | 0.826141 | 3.19E-54 | -1.69E-46 |
| MS.gene058783 | MS.gene74758 | 0.841816 | 3.78E-58 | -1.69E-46 |
| MS.gene058979 | MS.gene74758 | 0.836826 | 7.45E-57 | -1.69E-46 |
| MS.gene059015 | MS.gene74758 | 0.830228 | 3.31E-55 | -1.69E-46 |
| MS.gene059170 | MS.gene74758 | 0.815955 | 7.09E-52 | -1.69E-46 |
| MS.gene059272 | MS.gene74758 | 0.801732 | 7.84E-49 | -1.69E-46 |
| MS.gene05952 | MS.gene74758 | 0.811936 | 5.46E-51 | -1.69E-46 |
| MS.gene05954 | MS.gene74758 | 0.822133 | 2.79E-53 | -1.69E-46 |
| MS.gene059625 | MS.gene74758 | 0.841331 | 5.07E-58 | -1.69E-46 |
| MS.gene059842 | MS.gene74758 | 0.81073 | 9.97E-51 | -1.69E-46 |
| MS.gene05985 | MS.gene74758 | -0.830805 | 2.39E-55 | -1.69E-46 |
| MS.gene059965 | MS.gene74758 | 0.809715 | 1.65E-50 | -1.69E-46 |
| MS.gene060257 | MS.gene74758 | 0.80452 | 2.08E-49 | -1.69E-46 |
| MS.gene060258 | MS.gene74758 | 0.816239 | 6.13E-52 | -1.69E-46 |
| MS.gene060310 | MS.gene74758 | 0.830787 | 2.41E-55 | -1.69E-46 |
| MS.gene060322 | MS.gene74758 | 0.802188 | 6.31E-49 | -1.69E-46 |
| MS.gene060365 | MS.gene74758 | 0.836069 | 1.16E-56 | -1.69E-46 |
| MS.gene060373 | MS.gene74758 | 0.812058 | 5.13E-51 | -1.69E-46 |
| MS.gene060429 | MS.gene74758 | 0.838646 | 2.54E-57 | -1.69E-46 |
| MS.gene060521 | MS.gene74758 | 0.842407 | 2.64E-58 | -1.69E-46 |
| MS.gene060587 | MS.gene74758 | 0.809679 | 1.68E-50 | -1.69E-46 |
| MS.gene060840 | MS.gene74758 | 0.844398 | 7.75E-59 | -1.69E-46 |
| MS.gene060935 | MS.gene74758 | 0.815076 | 1.11E-51 | -1.69E-46 |
| MS.gene061100 | MS.gene74758 | 0.820605 | 6.28E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene74758 | MS.gene01283 | PPI |
| MS.gene56558 | MS.gene74758 | PPI |
| MS.gene74758 | MS.gene96813 | PPI |
| MS.gene006767 | MS.gene74758 | PPI |
| MS.gene01696 | MS.gene74758 | PPI |
| MS.gene031529 | MS.gene74758 | PPI |
| MS.gene69799 | MS.gene74758 | PPI |
| MS.gene74758 | MS.gene02264 | PPI |
| MS.gene74758 | MS.gene002305 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74758.t1 | MTR_7g009070 | 90.299 | 134 | 10 | 1 | 1 | 131 | 1 | 134 | 1.89e-79 | 230 |
| MS.gene74758.t1 | MTR_5g037950 | 55.385 | 130 | 54 | 1 | 1 | 130 | 1 | 126 | 9.14e-41 | 132 |
| MS.gene74758.t1 | MTR_5g037930 | 56.034 | 116 | 51 | 0 | 15 | 130 | 12 | 127 | 7.71e-39 | 127 |
| MS.gene74758.t1 | MTR_5g037890 | 54.701 | 117 | 53 | 0 | 14 | 130 | 9 | 125 | 8.19e-39 | 127 |
| MS.gene74758.t1 | MTR_1g023140 | 48.214 | 112 | 58 | 0 | 19 | 130 | 2 | 113 | 1.71e-38 | 126 |
| MS.gene74758.t1 | MTR_3g112410 | 46.847 | 111 | 59 | 0 | 19 | 129 | 2 | 112 | 1.19e-35 | 119 |
| MS.gene74758.t1 | MTR_5g021180 | 46.018 | 113 | 61 | 0 | 19 | 131 | 4 | 116 | 1.00e-34 | 117 |
| MS.gene74758.t1 | MTR_8g107460 | 42.574 | 101 | 58 | 0 | 29 | 129 | 260 | 360 | 1.55e-26 | 101 |
| MS.gene74758.t1 | MTR_7g073680 | 38.095 | 105 | 65 | 0 | 22 | 126 | 23 | 127 | 2.39e-25 | 93.6 |
| MS.gene74758.t1 | MTR_8g005320 | 35.238 | 105 | 68 | 0 | 22 | 126 | 25 | 129 | 2.01e-24 | 91.3 |
| MS.gene74758.t1 | MTR_2g010750 | 37.143 | 105 | 66 | 0 | 23 | 127 | 9 | 113 | 5.75e-24 | 89.7 |
| MS.gene74758.t1 | MTR_4g081380 | 36.697 | 109 | 69 | 0 | 18 | 126 | 5 | 113 | 9.89e-24 | 89.4 |
| MS.gene74758.t1 | MTR_8g006685 | 35.238 | 105 | 68 | 0 | 22 | 126 | 94 | 198 | 1.76e-23 | 90.9 |
| MS.gene74758.t1 | MTR_8g006560 | 35.238 | 105 | 68 | 0 | 22 | 126 | 94 | 198 | 1.76e-23 | 90.9 |
| MS.gene74758.t1 | MTR_2g082590 | 35.398 | 113 | 73 | 0 | 14 | 126 | 1 | 113 | 2.84e-23 | 87.8 |
| MS.gene74758.t1 | MTR_2g082590 | 39.806 | 103 | 60 | 1 | 24 | 126 | 26 | 126 | 6.31e-23 | 87.4 |
| MS.gene74758.t1 | MTR_1g098660 | 35.955 | 89 | 55 | 2 | 41 | 127 | 74 | 162 | 1.53e-18 | 77.0 |
| MS.gene74758.t1 | MTR_1g114290 | 38.298 | 94 | 53 | 3 | 35 | 127 | 77 | 166 | 1.25e-17 | 75.1 |
| MS.gene74758.t1 | MTR_3g089065 | 36.082 | 97 | 55 | 4 | 38 | 129 | 78 | 172 | 1.34e-17 | 74.7 |
| MS.gene74758.t1 | MTR_2g079420 | 36.145 | 83 | 51 | 2 | 48 | 128 | 89 | 171 | 1.57e-16 | 72.0 |
| MS.gene74758.t1 | MTR_7g102130 | 29.508 | 122 | 82 | 2 | 8 | 129 | 10 | 127 | 5.91e-16 | 69.3 |
| MS.gene74758.t1 | MTR_7g080250 | 35.484 | 124 | 69 | 5 | 2 | 122 | 57 | 172 | 1.55e-15 | 69.7 |
| MS.gene74758.t1 | MTR_8g059015 | 34.343 | 99 | 60 | 4 | 32 | 128 | 79 | 174 | 1.74e-15 | 69.3 |
| MS.gene74758.t1 | MTR_4g094690 | 31.707 | 82 | 54 | 1 | 49 | 128 | 85 | 166 | 4.98e-15 | 67.8 |
| MS.gene74758.t1 | MTR_4g085880 | 36.842 | 76 | 47 | 1 | 48 | 122 | 84 | 159 | 3.58e-14 | 65.9 |
| MS.gene74758.t1 | MTR_2g079340 | 32.955 | 88 | 57 | 2 | 44 | 129 | 51 | 138 | 4.10e-14 | 65.5 |
| MS.gene74758.t1 | MTR_4g088905 | 35.000 | 80 | 52 | 0 | 49 | 128 | 25 | 104 | 3.26e-12 | 62.4 |
| MS.gene74758.t1 | MTR_1g053160 | 32.468 | 77 | 51 | 1 | 43 | 118 | 425 | 501 | 2.87e-11 | 59.7 |
| MS.gene74758.t1 | MTR_3g112400 | 56.098 | 41 | 18 | 0 | 79 | 119 | 41 | 81 | 4.58e-11 | 55.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74758.t1 | AT5G39950 | 59.398 | 133 | 52 | 1 | 1 | 131 | 1 | 133 | 1.06e-56 | 173 |
| MS.gene74758.t1 | AT1G45145 | 52.475 | 101 | 48 | 0 | 29 | 129 | 11 | 111 | 8.86e-36 | 119 |
| MS.gene74758.t1 | AT3G51030 | 46.018 | 113 | 61 | 0 | 19 | 131 | 2 | 114 | 2.65e-34 | 115 |
| MS.gene74758.t1 | AT1G59730 | 42.748 | 131 | 71 | 2 | 1 | 130 | 1 | 128 | 6.50e-34 | 115 |
| MS.gene74758.t1 | AT1G19730 | 46.429 | 112 | 59 | 1 | 19 | 129 | 2 | 113 | 1.90e-33 | 113 |
| MS.gene74758.t1 | AT1G69880 | 51.546 | 97 | 47 | 0 | 33 | 129 | 47 | 143 | 2.96e-33 | 114 |
| MS.gene74758.t1 | AT5G42980 | 47.059 | 102 | 54 | 0 | 29 | 130 | 11 | 112 | 2.45e-31 | 108 |
| MS.gene74758.t1 | AT3G17880 | 40.000 | 105 | 63 | 0 | 25 | 129 | 265 | 369 | 9.69e-26 | 99.8 |
| MS.gene74758.t1 | AT3G17880 | 40.000 | 105 | 63 | 0 | 25 | 129 | 272 | 376 | 1.20e-25 | 99.8 |
| MS.gene74758.t1 | AT3G08710 | 39.062 | 128 | 74 | 2 | 1 | 126 | 1 | 126 | 2.11e-24 | 91.3 |
| MS.gene74758.t1 | AT3G08710 | 39.062 | 128 | 74 | 2 | 1 | 126 | 1 | 126 | 2.11e-24 | 91.3 |
| MS.gene74758.t1 | AT3G08710 | 39.062 | 128 | 74 | 2 | 1 | 126 | 1 | 126 | 2.11e-24 | 91.3 |
| MS.gene74758.t1 | AT3G56420 | 38.298 | 94 | 58 | 0 | 33 | 126 | 50 | 143 | 2.69e-24 | 91.7 |
| MS.gene74758.t1 | AT3G56420 | 38.298 | 94 | 58 | 0 | 33 | 126 | 50 | 143 | 2.69e-24 | 91.7 |
| MS.gene74758.t1 | AT3G56420 | 38.298 | 94 | 58 | 0 | 33 | 126 | 50 | 143 | 2.69e-24 | 91.7 |
| MS.gene74758.t1 | AT2G40790 | 38.298 | 94 | 58 | 0 | 33 | 126 | 50 | 143 | 1.30e-21 | 84.7 |
| MS.gene74758.t1 | AT2G40790 | 38.298 | 94 | 58 | 0 | 33 | 126 | 50 | 143 | 1.30e-21 | 84.7 |
| MS.gene74758.t1 | AT1G11530 | 38.144 | 97 | 60 | 0 | 30 | 126 | 9 | 105 | 2.41e-21 | 82.8 |
| MS.gene74758.t1 | AT1G43560 | 36.697 | 109 | 66 | 3 | 12 | 117 | 41 | 149 | 8.58e-20 | 80.1 |
| MS.gene74758.t1 | AT1G76760 | 39.744 | 78 | 46 | 1 | 41 | 117 | 77 | 154 | 6.32e-19 | 78.2 |
| MS.gene74758.t1 | AT1G50320 | 44.286 | 70 | 38 | 1 | 43 | 111 | 85 | 154 | 4.12e-17 | 73.6 |
| MS.gene74758.t1 | AT3G02730 | 36.782 | 87 | 54 | 1 | 46 | 131 | 88 | 174 | 5.82e-17 | 73.2 |
| MS.gene74758.t1 | AT3G15360 | 32.673 | 101 | 63 | 4 | 30 | 128 | 92 | 189 | 1.83e-16 | 72.4 |
| MS.gene74758.t1 | AT1G03680 | 36.145 | 83 | 51 | 2 | 48 | 128 | 95 | 177 | 5.47e-16 | 70.9 |
| MS.gene74758.t1 | AT4G03520 | 36.620 | 71 | 44 | 1 | 48 | 117 | 101 | 171 | 1.60e-15 | 69.7 |
| MS.gene74758.t1 | AT3G53220 | 26.549 | 113 | 81 | 1 | 17 | 129 | 15 | 125 | 1.60e-15 | 68.2 |
| MS.gene74758.t1 | AT1G31020 | 30.000 | 110 | 75 | 1 | 21 | 128 | 47 | 156 | 4.20e-15 | 67.8 |
| MS.gene74758.t1 | AT2G35010 | 34.146 | 82 | 52 | 1 | 49 | 128 | 110 | 191 | 4.82e-15 | 68.6 |
| MS.gene74758.t1 | AT2G35010 | 34.146 | 82 | 52 | 1 | 49 | 128 | 110 | 191 | 4.82e-15 | 68.6 |
| MS.gene74758.t1 | AT5G16400 | 32.184 | 87 | 58 | 1 | 46 | 131 | 98 | 184 | 1.66e-14 | 67.0 |
| MS.gene74758.t1 | AT4G04950 | 33.645 | 107 | 67 | 1 | 22 | 128 | 2 | 104 | 4.32e-14 | 67.8 |
| MS.gene74758.t1 | AT4G32580 | 31.868 | 91 | 62 | 0 | 38 | 128 | 14 | 104 | 4.53e-14 | 65.1 |
| MS.gene74758.t1 | AT1G52990 | 32.632 | 95 | 63 | 1 | 36 | 129 | 218 | 312 | 1.48e-13 | 65.9 |
| MS.gene74758.t1 | AT4G26160 | 32.292 | 96 | 61 | 2 | 38 | 129 | 105 | 200 | 2.25e-12 | 62.0 |
| MS.gene74758.t1 | AT2G41680 | 28.889 | 90 | 62 | 2 | 43 | 130 | 440 | 529 | 1.07e-11 | 61.2 |
Find 25 sgRNAs with CRISPR-Local
Find 66 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATGTGGCACAAGAGTTTA+AGG | 0.257673 | 7.1:+86083013 | MS.gene74758:intron |
| AATCGATGTTGATGAATTAT+CGG | 0.348841 | 7.1:+86082373 | MS.gene74758:CDS |
| TTAGCCATAGCTTGAAGAAT+CGG | 0.442276 | 7.1:-86082323 | None:intergenic |
| CGTTTGTGTTGTTGAAGAAT+GGG | 0.453169 | 7.1:+86083051 | MS.gene74758:CDS |
| ACGTTTGTGTTGTTGAAGAA+TGG | 0.456074 | 7.1:+86083050 | MS.gene74758:CDS |
| TTCTCCTCCTTAGTCGGCAG+TGG | 0.459284 | 7.1:+86082043 | MS.gene74758:CDS |
| TACGGGGCCACTGCCGACTA+AGG | 0.463959 | 7.1:-86082050 | None:intergenic |
| TGATTGATTTCTCTGCTACA+TGG | 0.471205 | 7.1:+86082276 | MS.gene74758:CDS |
| TGATGATTCTGATGACTGTA+CGG | 0.487264 | 7.1:-86082068 | None:intergenic |
| GAATGGGAAAGAGGTTGATA+AGG | 0.491854 | 7.1:+86083067 | MS.gene74758:CDS |
| GATGATTCTGATGACTGTAC+GGG | 0.500909 | 7.1:-86082067 | None:intergenic |
| GATTTCTCTGCTACATGGTG+TGG | 0.519111 | 7.1:+86082281 | MS.gene74758:CDS |
| GGCACAAGAGTTTAAGGTGC+AGG | 0.519916 | 7.1:+86083019 | MS.gene74758:CDS |
| AAAGAGGTTGATAAGGTTGT+CGG | 0.520686 | 7.1:+86083074 | MS.gene74758:CDS |
| TAAGGTTGTCGGAGCAAAGA+AGG | 0.540917 | 7.1:+86083085 | MS.gene74758:CDS |
| GTGTGGACCTTGTAAAATGA+TGG | 0.541235 | 7.1:+86082298 | MS.gene74758:CDS |
| CCTTCCACTCATCTGCTCGC+TGG | 0.549073 | 7.1:+86082110 | MS.gene74758:CDS |
| GTTGTTGAAGAATGGGAAAG+AGG | 0.553595 | 7.1:+86083058 | MS.gene74758:CDS |
| AGATGAGTGGAAGGTCTTGA+CGG | 0.570930 | 7.1:-86082101 | None:intergenic |
| GGAACCGATTCTTCAAGCTA+TGG | 0.574314 | 7.1:+86082319 | MS.gene74758:CDS |
| GGGGCCACTGCCGACTAAGG+AGG | 0.594415 | 7.1:-86082047 | None:intergenic |
| GTTGCCAGCGAGCAGATGAG+TGG | 0.605035 | 7.1:-86082114 | None:intergenic |
| TTCTTCAACAACACAAACGT+TGG | 0.610426 | 7.1:-86083047 | None:intergenic |
| CCAGCGAGCAGATGAGTGGA+AGG | 0.627549 | 7.1:-86082110 | None:intergenic |
| ATGATTCTGATGACTGTACG+GGG | 0.715538 | 7.1:-86082066 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTATGTTATTTGTTAAAA+TGG | + | chr7.1:86082547-86082566 | MS.gene74758:intron | 10.0% |
| !!! | TCATTTTTACAAATTATTAT+CGG | + | chr7.1:86082904-86082923 | MS.gene74758:intron | 10.0% |
| !! | CCAAAAAATAGAAAAATAAA+TGG | - | chr7.1:86082212-86082231 | None:intergenic | 15.0% |
| !!! | AATTATACAAAAAGCATTTA+AGG | + | chr7.1:86082678-86082697 | MS.gene74758:intron | 15.0% |
| !!! | ATAATGATTTAATTTTTGTG+TGG | + | chr7.1:86082971-86082990 | MS.gene74758:intron | 15.0% |
| !!! | ATTGTATGTTATTTTTTTGA+GGG | + | chr7.1:86082520-86082539 | MS.gene74758:intron | 15.0% |
| !!! | CCATTTATTTTTCTATTTTT+TGG | + | chr7.1:86082209-86082228 | MS.gene74758:intron | 15.0% |
| !!! | TGATAATGGTAAATTTTAAA+AGG | - | chr7.1:86082723-86082742 | None:intergenic | 15.0% |
| !!! | AACTAAAAATACATTTTTGC+CGG | + | chr7.1:86082614-86082633 | MS.gene74758:intron | 20.0% |
| !!! | ATGTTATTTGTTAAAATGGA+TGG | + | chr7.1:86082551-86082570 | MS.gene74758:intron | 20.0% |
| !!! | ATTTTAAAAGGAAAAAGGTT+AGG | - | chr7.1:86082711-86082730 | None:intergenic | 20.0% |
| !!! | CATTGTATGTTATTTTTTTG+AGG | + | chr7.1:86082519-86082538 | MS.gene74758:intron | 20.0% |
| !!! | GGTAAATTTTAAAAGGAAAA+AGG | - | chr7.1:86082716-86082735 | None:intergenic | 20.0% |
| !!! | TTAATTTTTGTGTGGTTTTT+TGG | + | chr7.1:86082979-86082998 | MS.gene74758:intron | 20.0% |
| ! | AACAGTATAGTTGATCAAAT+TGG | - | chr7.1:86082413-86082432 | None:intergenic | 25.0% |
| ! | ACAGTATAGTTGATCAAATT+GGG | - | chr7.1:86082412-86082431 | None:intergenic | 25.0% |
| ! | ATTGAGATCTAAAGAGATAT+GGG | - | chr7.1:86082181-86082200 | None:intergenic | 25.0% |
| ! | CAAATAATAACACATCGAAT+CGG | - | chr7.1:86082803-86082822 | None:intergenic | 25.0% |
| ! | TATTGAGATCTAAAGAGATA+TGG | - | chr7.1:86082182-86082201 | None:intergenic | 25.0% |
| ! | TTCTCAAAGTTTATTATAGC+CGG | - | chr7.1:86082636-86082655 | None:intergenic | 25.0% |
| !! | AATCGATGTTGATGAATTAT+CGG | + | chr7.1:86082373-86082392 | MS.gene74758:CDS | 25.0% |
| !! | ACCATATTTTACTTACTTGA+CGG | - | chr7.1:86082764-86082783 | None:intergenic | 25.0% |
| !!! | TTTTGATTTTCTGTTTGTGA+AGG | + | chr7.1:86082250-86082269 | MS.gene74758:intron | 25.0% |
| ACCGTCAAGTAAGTAAAATA+TGG | + | chr7.1:86082760-86082779 | MS.gene74758:intron | 30.0% | |
| AGAAGCAATAACAACACATA+TGG | - | chr7.1:86082941-86082960 | None:intergenic | 30.0% | |
| GAAGGATGAACTTAAAAACA+AGG | + | chr7.1:86083103-86083122 | MS.gene74758:CDS | 30.0% | |
| TTAAAAGGAAAAAGGTTAGG+TGG | - | chr7.1:86082708-86082727 | None:intergenic | 30.0% | |
| ! | TTCTTTAGATGTTTTTCGTG+TGG | + | chr7.1:86082586-86082605 | MS.gene74758:intron | 30.0% |
| !! | ATTTTTGTGTGGTTTTTTGG+TGG | + | chr7.1:86082982-86083001 | MS.gene74758:intron | 30.0% |
| !! | TTTTTGTGTGGTTTTTTGGT+GGG | + | chr7.1:86082983-86083002 | MS.gene74758:intron | 30.0% |
| TGATGATTCTGATGACTGTA+CGG | - | chr7.1:86082071-86082090 | None:intergenic | 35.0% | |
| TTAGCCATAGCTTGAAGAAT+CGG | - | chr7.1:86082326-86082345 | None:intergenic | 35.0% | |
| TTCTTCAACAACACAAACGT+TGG | - | chr7.1:86083050-86083069 | None:intergenic | 35.0% | |
| ! | ACGTTTGTGTTGTTGAAGAA+TGG | + | chr7.1:86083050-86083069 | MS.gene74758:CDS | 35.0% |
| ! | CGTTTGTGTTGTTGAAGAAT+GGG | + | chr7.1:86083051-86083070 | MS.gene74758:CDS | 35.0% |
| ! | TGATTGATTTCTCTGCTACA+TGG | + | chr7.1:86082276-86082295 | MS.gene74758:CDS | 35.0% |
| ! | TGATTTTCTGTTTGTGAAGG+TGG | + | chr7.1:86082253-86082272 | MS.gene74758:intron | 35.0% |
| !! | AAAGAGGTTGATAAGGTTGT+CGG | + | chr7.1:86083074-86083093 | MS.gene74758:CDS | 35.0% |
| !! | ATCGGTTCCATCATTTTACA+AGG | - | chr7.1:86082308-86082327 | None:intergenic | 35.0% |
| !! | TCATTTTTCTCCTCCTTAGT+CGG | + | chr7.1:86082037-86082056 | MS.gene74758:CDS | 35.0% |
| !!! | AATTTTTAGCACCGACACTT+CGG | + | chr7.1:86082447-86082466 | MS.gene74758:intron | 35.0% |
| !!! | GGTTTTTTGGTGGGAATTAT+AGG | + | chr7.1:86082992-86083011 | MS.gene74758:intron | 35.0% |
| ACACGGACAAGACATGATAA+TGG | - | chr7.1:86082737-86082756 | None:intergenic | 40.0% | |
| ACTTACTTGACGGTCTAACA+CGG | - | chr7.1:86082754-86082773 | None:intergenic | 40.0% | |
| ATGATTCTGATGACTGTACG+GGG | - | chr7.1:86082069-86082088 | None:intergenic | 40.0% | |
| GATGATTCTGATGACTGTAC+GGG | - | chr7.1:86082070-86082089 | None:intergenic | 40.0% | |
| GTGTGGACCTTGTAAAATGA+TGG | + | chr7.1:86082298-86082317 | MS.gene74758:CDS | 40.0% | |
| GTTGTTGAAGAATGGGAAAG+AGG | + | chr7.1:86083058-86083077 | MS.gene74758:CDS | 40.0% | |
| TTGGTGGGAATTATAGGATG+TGG | + | chr7.1:86082998-86083017 | MS.gene74758:intron | 40.0% | |
| !! | GAATGGGAAAGAGGTTGATA+AGG | + | chr7.1:86083067-86083086 | MS.gene74758:CDS | 40.0% |
| AAACCCTCTATCCGAAGTGT+CGG | - | chr7.1:86082461-86082480 | None:intergenic | 45.0% | |
| AGATGAGTGGAAGGTCTTGA+CGG | - | chr7.1:86082104-86082123 | None:intergenic | 45.0% | |
| GATTTCTCTGCTACATGGTG+TGG | + | chr7.1:86082281-86082300 | MS.gene74758:CDS | 45.0% | |
| GGATGTGGCACAAGAGTTTA+AGG | + | chr7.1:86083013-86083032 | MS.gene74758:intron | 45.0% | |
| TAAGGTTGTCGGAGCAAAGA+AGG | + | chr7.1:86083085-86083104 | MS.gene74758:CDS | 45.0% | |
| ! | GATATGGGTTTTACGAGACG+AGG | - | chr7.1:86082166-86082185 | None:intergenic | 45.0% |
| ! | GGAACCGATTCTTCAAGCTA+TGG | + | chr7.1:86082319-86082338 | MS.gene74758:CDS | 45.0% |
| ! | GGCACAAGAGTTTAAGGTGC+AGG | + | chr7.1:86083019-86083038 | MS.gene74758:CDS | 50.0% |
| TTCTCCTCCTTAGTCGGCAG+TGG | + | chr7.1:86082043-86082062 | MS.gene74758:CDS | 55.0% | |
| ! | GCACCGACACTTCGGATAGA+GGG | + | chr7.1:86082455-86082474 | MS.gene74758:intron | 55.0% |
| !! | AGCACCGACACTTCGGATAG+AGG | + | chr7.1:86082454-86082473 | MS.gene74758:intron | 55.0% |
| CCAGCGAGCAGATGAGTGGA+AGG | - | chr7.1:86082113-86082132 | None:intergenic | 60.0% | |
| CCTTCCACTCATCTGCTCGC+TGG | + | chr7.1:86082110-86082129 | MS.gene74758:CDS | 60.0% | |
| GTTGCCAGCGAGCAGATGAG+TGG | - | chr7.1:86082117-86082136 | None:intergenic | 60.0% | |
| ! | TACGGGGCCACTGCCGACTA+AGG | - | chr7.1:86082053-86082072 | None:intergenic | 65.0% |
| ! | GGGGCCACTGCCGACTAAGG+AGG | - | chr7.1:86082050-86082069 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 86082031 | 86083145 | 86082031 | ID=MS.gene74758 |
| chr7.1 | mRNA | 86082031 | 86083145 | 86082031 | ID=MS.gene74758.t1;Parent=MS.gene74758 |
| chr7.1 | exon | 86082031 | 86082171 | 86082031 | ID=MS.gene74758.t1.exon1;Parent=MS.gene74758.t1 |
| chr7.1 | CDS | 86082031 | 86082171 | 86082031 | ID=cds.MS.gene74758.t1;Parent=MS.gene74758.t1 |
| chr7.1 | exon | 86082272 | 86082394 | 86082272 | ID=MS.gene74758.t1.exon2;Parent=MS.gene74758.t1 |
| chr7.1 | CDS | 86082272 | 86082394 | 86082272 | ID=cds.MS.gene74758.t1;Parent=MS.gene74758.t1 |
| chr7.1 | exon | 86083014 | 86083145 | 86083014 | ID=MS.gene74758.t1.exon3;Parent=MS.gene74758.t1 |
| chr7.1 | CDS | 86083014 | 86083145 | 86083014 | ID=cds.MS.gene74758.t1;Parent=MS.gene74758.t1 |
| Gene Sequence |
| Protein sequence |
