Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78775.t1 | XP_024639431.1 | 70 | 387 | 36 | 2 | 18 | 404 | 1 | 307 | 6.20E-122 | 447.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78775.t1 | A0A396HXP9 | 70.0 | 387 | 36 | 2 | 18 | 404 | 1 | 307 | 4.5e-122 | 447.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049190 | MS.gene78775 | 0.80285 | 4.61E-49 | -1.69E-46 |
| MS.gene049254 | MS.gene78775 | 0.813536 | 2.44E-51 | -1.69E-46 |
| MS.gene049404 | MS.gene78775 | 0.817799 | 2.73E-52 | -1.69E-46 |
| MS.gene049850 | MS.gene78775 | 0.808625 | 2.83E-50 | -1.69E-46 |
| MS.gene050559 | MS.gene78775 | 0.809463 | 1.87E-50 | -1.69E-46 |
| MS.gene050561 | MS.gene78775 | 0.811367 | 7.25E-51 | -1.69E-46 |
| MS.gene050562 | MS.gene78775 | 0.802565 | 5.28E-49 | -1.69E-46 |
| MS.gene050611 | MS.gene78775 | 0.806875 | 6.65E-50 | -1.69E-46 |
| MS.gene051279 | MS.gene78775 | 0.807444 | 5.04E-50 | -1.69E-46 |
| MS.gene051744 | MS.gene78775 | 0.842029 | 3.32E-58 | -1.69E-46 |
| MS.gene051957 | MS.gene78775 | 0.814123 | 1.81E-51 | -1.69E-46 |
| MS.gene052519 | MS.gene78775 | 0.817079 | 3.97E-52 | -1.69E-46 |
| MS.gene052582 | MS.gene78775 | 0.820373 | 7.10E-53 | -1.69E-46 |
| MS.gene052584 | MS.gene78775 | 0.816599 | 5.09E-52 | -1.69E-46 |
| MS.gene052616 | MS.gene78775 | 0.806093 | 9.73E-50 | -1.69E-46 |
| MS.gene052867 | MS.gene78775 | 0.805459 | 1.32E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene78775 | 0.813726 | 2.21E-51 | -1.69E-46 |
| MS.gene053900 | MS.gene78775 | 0.823858 | 1.10E-53 | -1.69E-46 |
| MS.gene053953 | MS.gene78775 | 0.81083 | 9.48E-51 | -1.69E-46 |
| MS.gene053966 | MS.gene78775 | 0.86036 | 2.18E-63 | -1.69E-46 |
| MS.gene053967 | MS.gene78775 | 0.902798 | 6.70E-79 | -1.69E-46 |
| MS.gene053974 | MS.gene78775 | 0.826189 | 3.11E-54 | -1.69E-46 |
| MS.gene053998 | MS.gene78775 | 0.834695 | 2.58E-56 | -1.69E-46 |
| MS.gene05447 | MS.gene78775 | 0.800157 | 1.64E-48 | -1.69E-46 |
| MS.gene054651 | MS.gene78775 | 0.834346 | 3.16E-56 | -1.69E-46 |
| MS.gene055586 | MS.gene78775 | 0.800247 | 1.58E-48 | -1.69E-46 |
| MS.gene055694 | MS.gene78775 | 0.812451 | 4.21E-51 | -1.69E-46 |
| MS.gene055818 | MS.gene78775 | 0.81622 | 6.19E-52 | -1.69E-46 |
| MS.gene056050 | MS.gene78775 | 0.834785 | 2.45E-56 | -1.69E-46 |
| MS.gene056162 | MS.gene78775 | 0.831468 | 1.64E-55 | -1.69E-46 |
| MS.gene056173 | MS.gene78775 | 0.818786 | 1.63E-52 | -1.69E-46 |
| MS.gene056252 | MS.gene78775 | 0.800027 | 1.75E-48 | -1.69E-46 |
| MS.gene056366 | MS.gene78775 | 0.831952 | 1.25E-55 | -1.69E-46 |
| MS.gene05686 | MS.gene78775 | 0.80571 | 1.17E-49 | -1.69E-46 |
| MS.gene057060 | MS.gene78775 | 0.805728 | 1.16E-49 | -1.69E-46 |
| MS.gene057598 | MS.gene78775 | 0.818739 | 1.67E-52 | -1.69E-46 |
| MS.gene057869 | MS.gene78775 | 0.806996 | 6.27E-50 | -1.69E-46 |
| MS.gene058009 | MS.gene78775 | 0.819543 | 1.10E-52 | -1.69E-46 |
| MS.gene058010 | MS.gene78775 | 0.837394 | 5.33E-57 | -1.69E-46 |
| MS.gene058037 | MS.gene78775 | 0.80247 | 5.53E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene78775 | 0.819651 | 1.04E-52 | -1.69E-46 |
| MS.gene058829 | MS.gene78775 | 0.822594 | 2.18E-53 | -1.69E-46 |
| MS.gene058979 | MS.gene78775 | 0.817733 | 2.83E-52 | -1.69E-46 |
| MS.gene059015 | MS.gene78775 | 0.8065 | 7.98E-50 | -1.69E-46 |
| MS.gene059625 | MS.gene78775 | 0.809062 | 2.28E-50 | -1.69E-46 |
| MS.gene060918 | MS.gene78775 | 0.823446 | 1.38E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78775.t1 | MTR_3g099600 | 52.653 | 245 | 98 | 3 | 18 | 260 | 1 | 229 | 1.12e-57 | 192 |
| MS.gene78775.t1 | MTR_3g099600 | 50.000 | 176 | 53 | 1 | 262 | 402 | 152 | 327 | 3.34e-35 | 133 |
| MS.gene78775.t1 | MTR_5g064800 | 82.946 | 129 | 19 | 1 | 280 | 405 | 149 | 277 | 3.30e-47 | 166 |
| MS.gene78775.t1 | MTR_5g064800 | 45.755 | 212 | 51 | 4 | 52 | 260 | 61 | 211 | 3.28e-30 | 120 |
| MS.gene78775.t1 | MTR_5g064760 | 52.083 | 96 | 39 | 3 | 296 | 390 | 125 | 214 | 1.02e-15 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78775.t1 | AT4G09060 | 44.269 | 253 | 140 | 1 | 14 | 265 | 13 | 265 | 4.70e-58 | 193 |
| MS.gene78775.t1 | AT4G09060 | 46.377 | 138 | 69 | 3 | 262 | 397 | 182 | 316 | 1.91e-20 | 92.0 |
| MS.gene78775.t1 | AT1G14680 | 45.344 | 247 | 120 | 4 | 18 | 261 | 1 | 235 | 6.70e-54 | 181 |
| MS.gene78775.t1 | AT1G14680 | 41.727 | 139 | 67 | 4 | 263 | 397 | 155 | 283 | 2.96e-18 | 85.1 |
| MS.gene78775.t1 | AT4G09060 | 41.241 | 274 | 134 | 3 | 19 | 265 | 18 | 291 | 4.68e-53 | 181 |
| MS.gene78775.t1 | AT4G09060 | 46.377 | 138 | 69 | 3 | 262 | 397 | 208 | 342 | 2.84e-20 | 92.0 |
Find 72 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCTTCTACATATGAATTCT+TGG | 0.213648 | 5.1:-40616170 | MS.gene78775:CDS |
| TTTGATGAAATCGTCGATTT+CGG | 0.249397 | 5.1:+40618624 | None:intergenic |
| TTGATGAAATCGTCGATTTC+GGG | 0.255477 | 5.1:+40618625 | None:intergenic |
| GTCTTCTACATATGGATTCT+TGG | 0.262711 | 5.1:-40615208 | MS.gene78775:CDS |
| TGAAAATAGCATATTGAAAA+AGG | 0.281164 | 5.1:-40614312 | MS.gene78775:CDS |
| AAGTTTGCTCGACTCTCTTT+TGG | 0.304400 | 5.1:-40616215 | MS.gene78775:CDS |
| TGTTGAGGAGAATCAGAAAT+TGG | 0.314750 | 5.1:-40618310 | MS.gene78775:CDS |
| GAAGCTTGATGTCGAGGGTT+TGG | 0.314876 | 5.1:+40618563 | None:intergenic |
| AAGCTTGATGTCGAGGGTTT+GGG | 0.338482 | 5.1:+40618564 | None:intergenic |
| AAAAGGACAAAGAGCATCTA+AGG | 0.339255 | 5.1:-40614467 | MS.gene78775:CDS |
| AAAAGGACAAAGAGCATCTA+AGG | 0.339255 | 5.1:-40615314 | MS.gene78775:CDS |
| TACCTTGGCAGATGTACTAT+TGG | 0.369909 | 5.1:+40614226 | None:intergenic |
| TGGGATGTTGGAACGTGATT+TGG | 0.388755 | 5.1:-40618151 | MS.gene78775:CDS |
| GTCGAGGGTTTGGGAGGAGA+TGG | 0.389737 | 5.1:+40618573 | None:intergenic |
| GAAAGGATTCATACAGAATC+TGG | 0.394294 | 5.1:-40614260 | MS.gene78775:CDS |
| CGCTATCGAGCTACTTGTCT+TGG | 0.395328 | 5.1:+40614087 | None:intergenic |
| GGAAGGCGTGTTTGCGAGCT+GGG | 0.415287 | 5.1:-40618170 | MS.gene78775:CDS |
| TACTAAGGTTGACTCTTCTT+CGG | 0.416932 | 5.1:-40616257 | MS.gene78775:intron |
| CAATCCATCGACCACTCATT+AGG | 0.420092 | 5.1:-40618601 | MS.gene78775:CDS |
| CGAGCTACTTGTCTTGGAAC+TGG | 0.447822 | 5.1:+40614093 | None:intergenic |
| AGGAAGGCGTGTTTGCGAGC+TGG | 0.456033 | 5.1:-40618171 | MS.gene78775:CDS |
| GCGAAGTGTGAGAATCTGTT+GGG | 0.460066 | 5.1:-40618285 | MS.gene78775:CDS |
| GTTGGGGCATTGTAGAGAAC+TGG | 0.463463 | 5.1:-40618268 | MS.gene78775:CDS |
| TTTCAAAATGAAGCTGAAGA+AGG | 0.465135 | 5.1:-40618198 | MS.gene78775:CDS |
| TCGAGGGTTTGGGAGGAGAT+GGG | 0.471014 | 5.1:+40618574 | None:intergenic |
| TCTTCTTCGGCAAGCACACA+TGG | 0.474846 | 5.1:-40616244 | MS.gene78775:CDS |
| TGAATTGATGTCTCTAGAAA+AGG | 0.480662 | 5.1:-40614484 | MS.gene78775:CDS |
| TGAATTGATGTCTCTAGAAA+AGG | 0.480662 | 5.1:-40615331 | MS.gene78775:CDS |
| AAAGACGAGTCTTCTACATA+TGG | 0.492701 | 5.1:-40615216 | MS.gene78775:CDS |
| AAGTAGCTCGATAGCGAAGA+AGG | 0.494411 | 5.1:-40614080 | MS.gene78775:CDS |
| AGCTGCTGTCAATGTGGAGC+GGG | 0.505097 | 5.1:-40615155 | MS.gene78775:intron |
| AGCTGAAGAAGGAGCGAGGA+AGG | 0.518905 | 5.1:-40618187 | MS.gene78775:CDS |
| GATGGTGATGGTGTTGTTGT+CGG | 0.530230 | 5.1:+40618660 | None:intergenic |
| GGCACGAAGCTTGATGTCGA+GGG | 0.536194 | 5.1:+40618558 | None:intergenic |
| TTGGCAGATGTACTATTGGT+AGG | 0.541731 | 5.1:+40614230 | None:intergenic |
| CGAACTCATTGAACAATCCA+AGG | 0.552460 | 5.1:-40618467 | MS.gene78775:intron |
| TAAGCTCGAAAGAGCTGAAG+AGG | 0.554165 | 5.1:-40615289 | MS.gene78775:CDS |
| TAGTGATGAAATACATGGAA+AGG | 0.556765 | 5.1:-40614277 | MS.gene78775:CDS |
| ATGTCGCCATGAGATTGAAT+CGG | 0.559587 | 5.1:-40618103 | MS.gene78775:intron |
| TGACCTCCTTGACTCTCTTG+TGG | 0.562654 | 5.1:-40615253 | MS.gene78775:CDS |
| ATGATACCGATTCAATCTCA+TGG | 0.571091 | 5.1:+40618097 | None:intergenic |
| GCTCGAAAGAGCTGAAGAGG+AGG | 0.578578 | 5.1:-40615286 | MS.gene78775:CDS |
| CCTCCTCTTCAGCTTTGTCG+AGG | 0.580231 | 5.1:+40614439 | None:intergenic |
| AGGCACGAAGCTTGATGTCG+AGG | 0.581651 | 5.1:+40618557 | None:intergenic |
| CTTGATGTCGAGGGTTTGGG+AGG | 0.585010 | 5.1:+40618567 | None:intergenic |
| TTCGGCAAGCACACATGGGG+AGG | 0.585493 | 5.1:-40616239 | MS.gene78775:CDS |
| TTCGGGTGGAAGAGACATGA+TGG | 0.585743 | 5.1:+40618642 | None:intergenic |
| TAACCTCGACAAAGCTGAAG+AGG | 0.588349 | 5.1:-40614442 | MS.gene78775:CDS |
| AGCGAAGTGTGAGAATCTGT+TGG | 0.590825 | 5.1:-40618286 | MS.gene78775:CDS |
| GGCGATAAAGAAGTTTGTTG+AGG | 0.590972 | 5.1:-40618325 | MS.gene78775:CDS |
| AAAGAGCTGAAGAGGAGGTG+AGG | 0.606699 | 5.1:-40615281 | MS.gene78775:CDS |
| CTTCTTCGGCAAGCACACAT+GGG | 0.608450 | 5.1:-40616243 | MS.gene78775:CDS |
| AGGATTCATACAGAATCTGG+TGG | 0.609008 | 5.1:-40614257 | MS.gene78775:CDS |
| AAGACCTAATGAGTGGTCGA+TGG | 0.616951 | 5.1:+40618597 | None:intergenic |
| TACCAATAGTACATCTGCCA+AGG | 0.617685 | 5.1:-40614228 | MS.gene78775:intron |
| AAGGTTAGTGATGAAATACA+TGG | 0.623151 | 5.1:-40614282 | MS.gene78775:CDS |
| ATGAAATCGTCGATTTCGGG+TGG | 0.634730 | 5.1:+40618628 | None:intergenic |
| GTGTTTGCGAGCTGGGATGT+TGG | 0.635975 | 5.1:-40618163 | MS.gene78775:CDS |
| GCATTGTAGAGAACTGGAGA+AGG | 0.636476 | 5.1:-40618262 | MS.gene78775:CDS |
| TTCTTCGGCAAGCACACATG+GGG | 0.642508 | 5.1:-40616242 | MS.gene78775:CDS |
| GTAGCTTAAAACAATCAACT+CGG | 0.647486 | 5.1:-40615374 | MS.gene78775:intron |
| CCTCGACAAAGCTGAAGAGG+AGG | 0.650548 | 5.1:-40614439 | MS.gene78775:intron |
| AAGCTGCTGTCAATGTGGAG+CGG | 0.655453 | 5.1:-40615156 | MS.gene78775:CDS |
| GGATTCATACAGAATCTGGT+GGG | 0.658187 | 5.1:-40614256 | MS.gene78775:CDS |
| CGAAGTGTGAGAATCTGTTG+GGG | 0.661772 | 5.1:-40618284 | MS.gene78775:CDS |
| TGGAAGAGACATGATGGTGA+TGG | 0.667795 | 5.1:+40618648 | None:intergenic |
| ATGAAGCTGAAGAAGGAGCG+AGG | 0.675640 | 5.1:-40618191 | MS.gene78775:CDS |
| AGATGGGAAGACCTAATGAG+TGG | 0.676635 | 5.1:+40618590 | None:intergenic |
| GTATGAAGCGTCTGTGAATG+CGG | 0.695860 | 5.1:-40618349 | MS.gene78775:CDS |
| CTGCTGCCACAAGAGAGTCA+AGG | 0.705247 | 5.1:+40615247 | None:intergenic |
| CTGCCACAAGAGAGTCAAGG+AGG | 0.721597 | 5.1:+40615250 | None:intergenic |
| TGAAGCGTCTGTGAATGCGG+TGG | 0.757584 | 5.1:-40618346 | MS.gene78775:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATTTCGAAAAATAA+AGG | + | chr5.1:40615843-40615862 | None:intergenic | 10.0% |
| !! | AAAATAAATAATAGTAATCA+TGG | + | chr5.1:40614307-40614326 | None:intergenic | 10.0% |
| !!! | ATATTTACTTTATTTTACTA+AGG | - | chr5.1:40616461-40616480 | MS.gene78775:intron | 10.0% |
| !!! | ATTACTATTATTTATTTTTC+AGG | - | chr5.1:40614309-40614328 | MS.gene78775:CDS | 10.0% |
| !!! | TAATTTTTGATTATCTTTTT+TGG | - | chr5.1:40614351-40614370 | MS.gene78775:intron | 10.0% |
| !! | AAAACTTAAAAATGTAGTAA+AGG | + | chr5.1:40615352-40615371 | None:intergenic | 15.0% |
| !! | AATGCAATTAATTACTTAAA+AGG | + | chr5.1:40618598-40618617 | None:intergenic | 15.0% |
| !! | ACAAAAATCTATTAAAAGAT+AGG | + | chr5.1:40615114-40615133 | None:intergenic | 15.0% |
| !! | CAAAAATCTATTAAAAGATA+GGG | + | chr5.1:40615113-40615132 | None:intergenic | 15.0% |
| !! | TAAATTCTAATAATACTTGT+AGG | - | chr5.1:40615704-40615723 | MS.gene78775:intron | 15.0% |
| !! | TAGTAAGAAATTTGATTAAA+TGG | - | chr5.1:40615604-40615623 | MS.gene78775:intron | 15.0% |
| !!! | GTTTTTTCTATTATAGAAAT+AGG | + | chr5.1:40616977-40616996 | None:intergenic | 15.0% |
| !!! | TATTATTTATTTTTCAGGAA+TGG | - | chr5.1:40614314-40614333 | MS.gene78775:CDS | 15.0% |
| !!! | TTTACAGTTTTTGAATTATA+TGG | - | chr5.1:40618350-40618369 | MS.gene78775:CDS | 15.0% |
| !! | AATTGTTTAAATTACACTAC+CGG | - | chr5.1:40614948-40614967 | MS.gene78775:intron | 20.0% |
| !! | AGTATAAAGTAAGTTGTTTA+GGG | - | chr5.1:40615216-40615235 | MS.gene78775:CDS | 20.0% |
| !! | ATAAATAATAGTAATCATGG+AGG | + | chr5.1:40614304-40614323 | None:intergenic | 20.0% |
| !! | ATTGAAAGATTTACGTATTA+TGG | + | chr5.1:40617997-40618016 | None:intergenic | 20.0% |
| !! | TAACAAATGTTGTAAAATTG+TGG | - | chr5.1:40617705-40617724 | MS.gene78775:intron | 20.0% |
| !! | TGAAAATAGCATATTGAAAA+AGG | - | chr5.1:40618421-40618440 | MS.gene78775:intron | 20.0% |
| !! | TTGAGATATTAATTGATTAG+TGG | - | chr5.1:40614703-40614722 | MS.gene78775:intron | 20.0% |
| !!! | AGTATTTGGAATTTCATTTT+CGG | - | chr5.1:40615895-40615914 | MS.gene78775:intron | 20.0% |
| !!! | ATTTTTAAGTTTTCCCATAT+TGG | - | chr5.1:40615359-40615378 | MS.gene78775:CDS | 20.0% |
| !!! | CAGTTTTCTATTATAGAAAT+AGG | + | chr5.1:40617944-40617963 | None:intergenic | 20.0% |
| !!! | CTTTTTGTTTTAGTTTTTGA+AGG | + | chr5.1:40614245-40614264 | None:intergenic | 20.0% |
| !!! | TGATTATCTTTTTTGGTTTT+TGG | - | chr5.1:40614358-40614377 | MS.gene78775:intron | 20.0% |
| !!! | TTTTTAAGTTTTCCCATATT+GGG | - | chr5.1:40615360-40615379 | MS.gene78775:CDS | 20.0% |
| ! | ACTATAGCATTATAATCTAG+TGG | - | chr5.1:40617738-40617757 | MS.gene78775:intron | 25.0% |
| ! | ACTTAAAAATGTAGTAAAGG+AGG | + | chr5.1:40615349-40615368 | None:intergenic | 25.0% |
| ! | ATTTAATTCAAAACAACCTG+CGG | - | chr5.1:40615481-40615500 | MS.gene78775:intron | 25.0% |
| ! | CTATAGCATTATAATCTAGT+GGG | - | chr5.1:40617739-40617758 | MS.gene78775:intron | 25.0% |
| ! | GAGTATAAAGTAAGTTGTTT+AGG | - | chr5.1:40615215-40615234 | MS.gene78775:CDS | 25.0% |
| ! | GCAATTAATTACTTAAAAGG+AGG | + | chr5.1:40618595-40618614 | None:intergenic | 25.0% |
| ! | TAAGCATGTATACTTAAGAA+TGG | + | chr5.1:40616107-40616126 | None:intergenic | 25.0% |
| ! | TTGTAAAATTGTGGTGATAA+CGG | - | chr5.1:40617714-40617733 | MS.gene78775:intron | 25.0% |
| !! | TGTTTAGGGTTATTTCATTT+GGG | - | chr5.1:40615230-40615249 | MS.gene78775:CDS | 25.0% |
| !! | TTGTTTAGGGTTATTTCATT+TGG | - | chr5.1:40615229-40615248 | MS.gene78775:CDS | 25.0% |
| !! | TTTTACTTGAAAGTCATATG+AGG | - | chr5.1:40615929-40615948 | MS.gene78775:intron | 25.0% |
| !!! | TTTGTTATTTGTCTAGAACA+TGG | + | chr5.1:40617692-40617711 | None:intergenic | 25.0% |
| AAATATGATCCCATTCCTTA+AGG | + | chr5.1:40615465-40615484 | None:intergenic | 30.0% | |
| AAATTCCAAATACTCAGTGA+CGG | + | chr5.1:40615889-40615908 | None:intergenic | 30.0% | |
| AAGGTTAGTGATGAAATACA+TGG | - | chr5.1:40618451-40618470 | MS.gene78775:intron | 30.0% | |
| AATATCGAAAACTCCCAATA+TGG | + | chr5.1:40615376-40615395 | None:intergenic | 30.0% | |
| AATTGGATTAAGCAGTATGT+TGG | + | chr5.1:40616214-40616233 | None:intergenic | 30.0% | |
| AATTTCTAATATCCCAAACC+AGG | + | chr5.1:40615307-40615326 | None:intergenic | 30.0% | |
| ACAAAATCCAGATGATAATC+AGG | + | chr5.1:40617341-40617360 | None:intergenic | 30.0% | |
| ACAGAATGCAAATGATAATC+AGG | + | chr5.1:40618188-40618207 | None:intergenic | 30.0% | |
| ACATACACCATTAGGATTTA+GGG | + | chr5.1:40614818-40614837 | None:intergenic | 30.0% | |
| ATACATACCCTAAATCCTAA+TGG | - | chr5.1:40614808-40614827 | MS.gene78775:intron | 30.0% | |
| ATACTAGTGGGAGTTAAAAT+TGG | + | chr5.1:40616231-40616250 | None:intergenic | 30.0% | |
| ATATCGAAAACTCCCAATAT+GGG | + | chr5.1:40615375-40615394 | None:intergenic | 30.0% | |
| ATGATGCACACAAATACAAA+AGG | + | chr5.1:40617081-40617100 | None:intergenic | 30.0% | |
| ATGGAAAGAAAAAGAAGGAA+GGG | + | chr5.1:40615418-40615437 | None:intergenic | 30.0% | |
| ATGGCATCAGAGATAAAAAT+TGG | + | chr5.1:40616711-40616730 | None:intergenic | 30.0% | |
| ATTATATGGAATGACTGACT+TGG | - | chr5.1:40618364-40618383 | MS.gene78775:intron | 30.0% | |
| ATTTCGAGATTAGAGAGAAA+GGG | + | chr5.1:40616386-40616405 | None:intergenic | 30.0% | |
| CAAAATCCAGATGATAATCA+GGG | + | chr5.1:40617340-40617359 | None:intergenic | 30.0% | |
| CAACAACTTCAAAAGAGAAA+AGG | + | chr5.1:40614681-40614700 | None:intergenic | 30.0% | |
| CAGAATGCAAATGATAATCA+GGG | + | chr5.1:40618187-40618206 | None:intergenic | 30.0% | |
| CATGTATACTTAAGAATGGT+GGG | + | chr5.1:40616103-40616122 | None:intergenic | 30.0% | |
| CCAAGTCCAAATTTAAATGA+GGG | + | chr5.1:40616130-40616149 | None:intergenic | 30.0% | |
| GATAACACTGCAGTTAAAAT+GGG | - | chr5.1:40618123-40618142 | MS.gene78775:CDS | 30.0% | |
| GTAAAAAGTCGACAGTAAAA+GGG | + | chr5.1:40618335-40618354 | None:intergenic | 30.0% | |
| GTAGCTTAAAACAATCAACT+CGG | - | chr5.1:40617359-40617378 | MS.gene78775:intron | 30.0% | |
| GTCTTCTACATATGAATTCT+TGG | - | chr5.1:40616563-40616582 | MS.gene78775:intron | 30.0% | |
| GTGTTATCAATAGCATATAG+AGG | + | chr5.1:40617219-40617238 | None:intergenic | 30.0% | |
| GTGTTATCAATAGCATATTG+TGG | + | chr5.1:40618111-40618130 | None:intergenic | 30.0% | |
| TAAAAAGTCGACAGTAAAAG+GGG | + | chr5.1:40618334-40618353 | None:intergenic | 30.0% | |
| TAACCAGTGTTGTAAAATTG+TGG | - | chr5.1:40616743-40616762 | MS.gene78775:intron | 30.0% | |
| TAAGCATGGTATCGTTATTA+GGG | + | chr5.1:40615741-40615760 | None:intergenic | 30.0% | |
| TACATACACCATTAGGATTT+AGG | + | chr5.1:40614819-40614838 | None:intergenic | 30.0% | |
| TAGCATATAGAGGAAAATAG+CGG | + | chr5.1:40617209-40617228 | None:intergenic | 30.0% | |
| TAGCATATTGTGGAAAATAG+CGG | + | chr5.1:40618101-40618120 | None:intergenic | 30.0% | |
| TAGTGATGAAATACATGGAA+AGG | - | chr5.1:40618456-40618475 | MS.gene78775:intron | 30.0% | |
| TATTGAAAAAGGAGAACAGA+AGG | - | chr5.1:40618432-40618451 | MS.gene78775:intron | 30.0% | |
| TATTTCGAGATTAGAGAGAA+AGG | + | chr5.1:40616387-40616406 | None:intergenic | 30.0% | |
| TCTCACAAGTGTTAATCATT+TGG | - | chr5.1:40616419-40616438 | MS.gene78775:intron | 30.0% | |
| TCTTTCACTAAAACTAAGCA+TGG | + | chr5.1:40615755-40615774 | None:intergenic | 30.0% | |
| TGATAACACTGCAGTTAAAA+TGG | - | chr5.1:40618122-40618141 | MS.gene78775:CDS | 30.0% | |
| TGATGCACACAAATACAAAA+GGG | + | chr5.1:40617080-40617099 | None:intergenic | 30.0% | |
| TGCTTACCCTCATTTAAATT+TGG | - | chr5.1:40616121-40616140 | MS.gene78775:CDS | 30.0% | |
| TGTAAAAAGTCGACAGTAAA+AGG | + | chr5.1:40618336-40618355 | None:intergenic | 30.0% | |
| TGTATCTCACACAAAAGATA+GGG | + | chr5.1:40615025-40615044 | None:intergenic | 30.0% | |
| TGTTAAATGAAATGCATTGC+AGG | + | chr5.1:40616190-40616209 | None:intergenic | 30.0% | |
| TTCTCTCTAATCTCGAAATA+TGG | - | chr5.1:40616387-40616406 | MS.gene78775:intron | 30.0% | |
| TTGTATCTCACACAAAAGAT+AGG | + | chr5.1:40615026-40615045 | None:intergenic | 30.0% | |
| TTTCAAAATGAAGCTGAAGA+AGG | - | chr5.1:40614535-40614554 | MS.gene78775:intron | 30.0% | |
| ! | AAATGTAGTAAAGGAGGTTT+TGG | + | chr5.1:40615343-40615362 | None:intergenic | 30.0% |
| ! | AATGTAGTAAAGGAGGTTTT+GGG | + | chr5.1:40615342-40615361 | None:intergenic | 30.0% |
| ! | ATTTTGTTCGATTTCTTTCG+AGG | + | chr5.1:40614199-40614218 | None:intergenic | 30.0% |
| ! | CAGATAAGTTCTGACATATT+AGG | - | chr5.1:40615791-40615810 | MS.gene78775:intron | 30.0% |
| ! | CTGGTTAATTGTCTAGAATA+TGG | + | chr5.1:40616730-40616749 | None:intergenic | 30.0% |
| ! | TGAATTGATGTCTCTAGAAA+AGG | - | chr5.1:40617402-40617421 | MS.gene78775:intron | 30.0% |
| !! | TTTGATGAAATCGTCGATTT+CGG | + | chr5.1:40614112-40614131 | None:intergenic | 30.0% |
| AAAAAGTCGACAGTAAAAGG+GGG | + | chr5.1:40618333-40618352 | None:intergenic | 35.0% | |
| AAACTTGACAAGAGAGTAAG+AGG | + | chr5.1:40617625-40617644 | None:intergenic | 35.0% | |
| AAAGACGAGTCTTCTACATA+TGG | - | chr5.1:40617517-40617536 | MS.gene78775:intron | 35.0% | |
| AACACTGCACTAAACATGTA+AGG | - | chr5.1:40617234-40617253 | MS.gene78775:intron | 35.0% | |
| AACTTCCAAACAATGCCTTA+AGG | - | chr5.1:40615447-40615466 | MS.gene78775:intron | 35.0% | |
| ACAAATACAAAAGGGAATGG+AGG | + | chr5.1:40617072-40617091 | None:intergenic | 35.0% | |
| ACAGAACTACATACACCATT+AGG | + | chr5.1:40614826-40614845 | None:intergenic | 35.0% | |
| ACATTGACATATGTCAACAC+CGG | + | chr5.1:40614970-40614989 | None:intergenic | 35.0% | |
| ACCCTTTGCCTCTAATAAAA+GGG | + | chr5.1:40615174-40615193 | None:intergenic | 35.0% | |
| ACTATAGCGCTATAATCTAG+CGG | - | chr5.1:40616776-40616795 | MS.gene78775:intron | 35.0% | |
| AGCGGAAAAATGAGAATCTT+AGG | - | chr5.1:40617866-40617885 | MS.gene78775:intron | 35.0% | |
| ATAAAAGGGTGGTTCCATAT+AGG | + | chr5.1:40615160-40615179 | None:intergenic | 35.0% | |
| ATGAATGCAATCACATGTGT+AGG | + | chr5.1:40614922-40614941 | None:intergenic | 35.0% | |
| ATTAGGATTCAAACCAGACA+TGG | - | chr5.1:40615808-40615827 | MS.gene78775:intron | 35.0% | |
| ATTGCCCTAATAGAGAAACT+AGG | + | chr5.1:40616838-40616857 | None:intergenic | 35.0% | |
| ATTGTTTGGAAGTTGAGTGA+AGG | + | chr5.1:40615441-40615460 | None:intergenic | 35.0% | |
| CAAACAATGCCTTAAGGAAT+GGG | - | chr5.1:40615453-40615472 | MS.gene78775:intron | 35.0% | |
| CAATGTCTCATGATACTAGT+GGG | + | chr5.1:40616243-40616262 | None:intergenic | 35.0% | |
| CACACAAATACAAAAGGGAA+TGG | + | chr5.1:40617075-40617094 | None:intergenic | 35.0% | |
| CCCTCATTTAAATTTGGACT+TGG | - | chr5.1:40616127-40616146 | MS.gene78775:CDS | 35.0% | |
| CGGAAAAATGAGAATCTTAG+GGG | - | chr5.1:40617868-40617887 | MS.gene78775:intron | 35.0% | |
| CTAAGCATGGTATCGTTATT+AGG | + | chr5.1:40615742-40615761 | None:intergenic | 35.0% | |
| GAAAGGATTCATACAGAATC+TGG | - | chr5.1:40618473-40618492 | MS.gene78775:CDS | 35.0% | |
| GAAGGATGGAAAGAAAAAGA+AGG | + | chr5.1:40615423-40615442 | None:intergenic | 35.0% | |
| GAGAAATCTAACAATAGCTC+AGG | + | chr5.1:40615961-40615980 | None:intergenic | 35.0% | |
| GATGGAAAGAAAAAGAAGGA+AGG | + | chr5.1:40615419-40615438 | None:intergenic | 35.0% | |
| GCATGTATACTTAAGAATGG+TGG | + | chr5.1:40616104-40616123 | None:intergenic | 35.0% | |
| GCCAAGTCCAAATTTAAATG+AGG | + | chr5.1:40616131-40616150 | None:intergenic | 35.0% | |
| GCGGAAAAATGAGAATCTTA+GGG | - | chr5.1:40617867-40617886 | MS.gene78775:intron | 35.0% | |
| GCTATTTATCAAACCTTACC+TGG | - | chr5.1:40615286-40615305 | MS.gene78775:CDS | 35.0% | |
| GTCTTCTACATATGGATTCT+TGG | - | chr5.1:40617525-40617544 | MS.gene78775:intron | 35.0% | |
| TAAAAGGGTGGTTCCATATA+GGG | + | chr5.1:40615159-40615178 | None:intergenic | 35.0% | |
| TAGTAGTAGTAGTCCAAGTT+GGG | + | chr5.1:40616326-40616345 | None:intergenic | 35.0% | |
| TATCAAACCTTACCTGGTTT+GGG | - | chr5.1:40615292-40615311 | MS.gene78775:CDS | 35.0% | |
| TCAATCCATATCATCCCTTA+CGG | + | chr5.1:40615583-40615602 | None:intergenic | 35.0% | |
| TCAATGTCTCATGATACTAG+TGG | + | chr5.1:40616244-40616263 | None:intergenic | 35.0% | |
| TCTAATCTCGAAATATGGCT+AGG | - | chr5.1:40616392-40616411 | MS.gene78775:intron | 35.0% | |
| TGGACTACTACTACTAGAAT+AGG | - | chr5.1:40616330-40616349 | MS.gene78775:intron | 35.0% | |
| TGTTGAGGAGAATCAGAAAT+TGG | - | chr5.1:40614423-40614442 | MS.gene78775:intron | 35.0% | |
| TTAGAACCCTGATTATCATC+TGG | - | chr5.1:40617331-40617350 | MS.gene78775:intron | 35.0% | |
| TTATCAAACCTTACCTGGTT+TGG | - | chr5.1:40615291-40615310 | MS.gene78775:CDS | 35.0% | |
| TTCCTAGTTTCTCCTCTATT+AGG | - | chr5.1:40617795-40617814 | MS.gene78775:intron | 35.0% | |
| TTTCGATATTCACACATGGT+GGG | - | chr5.1:40615386-40615405 | MS.gene78775:intron | 35.0% | |
| TTTCTCTATTAGGGCAATAG+CGG | - | chr5.1:40616840-40616859 | MS.gene78775:intron | 35.0% | |
| ! | ACCCTTTTATTAGAGGCAAA+GGG | - | chr5.1:40615170-40615189 | MS.gene78775:CDS | 35.0% |
| ! | ATTTGGGATATTGTTGAGTG+AGG | - | chr5.1:40615246-40615265 | MS.gene78775:CDS | 35.0% |
| ! | GAGTTTTCGATATTCACACA+TGG | - | chr5.1:40615382-40615401 | MS.gene78775:intron | 35.0% |
| ! | TAAATCACACCGTGGATTTT+AGG | - | chr5.1:40617179-40617198 | MS.gene78775:intron | 35.0% |
| ! | TACTAAGGTTGACTCTTCTT+CGG | - | chr5.1:40616476-40616495 | MS.gene78775:intron | 35.0% |
| ! | TCACCACAATTTTACAACAC+TGG | + | chr5.1:40616749-40616768 | None:intergenic | 35.0% |
| ! | TGCAAAAGTGTGTGAACTTT+CGG | - | chr5.1:40615982-40616001 | MS.gene78775:intron | 35.0% |
| ! | TTTGGGATATTGTTGAGTGA+GGG | - | chr5.1:40615247-40615266 | MS.gene78775:CDS | 35.0% |
| ! | TTTTCGATATTCACACATGG+TGG | - | chr5.1:40615385-40615404 | MS.gene78775:intron | 35.0% |
| !! | AAAAGGACAAAGAGCATCTA+AGG | - | chr5.1:40617419-40617438 | MS.gene78775:intron | 35.0% |
| !! | ATGATACCGATTCAATCTCA+TGG | + | chr5.1:40614639-40614658 | None:intergenic | 35.0% |
| !! | CTTTTGACTGAGTAATTGCT+GGG | - | chr5.1:40615632-40615651 | MS.gene78775:intron | 35.0% |
| !! | GTGTTGTGTTGATTAGGAAT+TGG | - | chr5.1:40614725-40614744 | MS.gene78775:intron | 35.0% |
| !! | TTAGTGGTGTTGTGTTGATT+AGG | - | chr5.1:40614719-40614738 | MS.gene78775:intron | 35.0% |
| !! | TTGATGAAATCGTCGATTTC+GGG | + | chr5.1:40614111-40614130 | None:intergenic | 35.0% |
| AAATCCACGGTGTGATTTAG+TGG | + | chr5.1:40617178-40617197 | None:intergenic | 40.0% | |
| AAGGACTTATGAACCATGTC+TGG | + | chr5.1:40615824-40615843 | None:intergenic | 40.0% | |
| AATCTCGAAATATGGCTAGG+TGG | - | chr5.1:40616395-40616414 | MS.gene78775:intron | 40.0% | |
| AATTGTGGTACTGCTAAGTC+AGG | - | chr5.1:40616299-40616318 | MS.gene78775:intron | 40.0% | |
| ACCGTCCTAGTTTCTCTATT+AGG | - | chr5.1:40616830-40616849 | MS.gene78775:intron | 40.0% | |
| AGAAAGAGAGAGAGAGAGAA+GGG | + | chr5.1:40615518-40615537 | None:intergenic | 40.0% | |
| AGGATTCATACAGAATCTGG+TGG | - | chr5.1:40618476-40618495 | MS.gene78775:CDS | 40.0% | |
| ATATGCCGTAAGGGATGATA+TGG | - | chr5.1:40615575-40615594 | MS.gene78775:intron | 40.0% | |
| ATGTCGCCATGAGATTGAAT+CGG | - | chr5.1:40614630-40614649 | MS.gene78775:intron | 40.0% | |
| CAAACCACTGTATAGCATCA+GGG | + | chr5.1:40615667-40615686 | None:intergenic | 40.0% | |
| CACCCTTTGCCTCTAATAAA+AGG | + | chr5.1:40615175-40615194 | None:intergenic | 40.0% | |
| CCAAACAATGCCTTAAGGAA+TGG | - | chr5.1:40615452-40615471 | MS.gene78775:intron | 40.0% | |
| CCCTAATAGAGAAACTAGGA+CGG | + | chr5.1:40616834-40616853 | None:intergenic | 40.0% | |
| CCGTCCTAGTTTCTCTATTA+GGG | - | chr5.1:40616831-40616850 | MS.gene78775:intron | 40.0% | |
| CCTAAAATCCACTATGTGCA+GGG | + | chr5.1:40618074-40618093 | None:intergenic | 40.0% | |
| CGAACTCATTGAACAATCCA+AGG | - | chr5.1:40614266-40614285 | MS.gene78775:CDS | 40.0% | |
| CTAATATCCCAAACCAGGTA+AGG | + | chr5.1:40615302-40615321 | None:intergenic | 40.0% | |
| CTAGTAGTAGTAGTCCAAGT+TGG | + | chr5.1:40616327-40616346 | None:intergenic | 40.0% | |
| CTATAGCGCTATAATCTAGC+GGG | - | chr5.1:40616777-40616796 | MS.gene78775:intron | 40.0% | |
| CTGATGCTATACAGTGGTTT+GGG | - | chr5.1:40615666-40615685 | MS.gene78775:intron | 40.0% | |
| CTGCCAAGGTAAGAATCATA+GGG | - | chr5.1:40618519-40618538 | MS.gene78775:CDS | 40.0% | |
| CTTTGCCTCTAATAAAAGGG+TGG | + | chr5.1:40615171-40615190 | None:intergenic | 40.0% | |
| GACTTAGCAGTACCACAATT+TGG | + | chr5.1:40616299-40616318 | None:intergenic | 40.0% | |
| GCAAAGGGTGGTTACATATA+GGG | - | chr5.1:40615185-40615204 | MS.gene78775:CDS | 40.0% | |
| GCACTAAACATGTAACAGTC+AGG | - | chr5.1:40617285-40617304 | MS.gene78775:intron | 40.0% | |
| GCAGTTAAAATGGGACAATC+AGG | - | chr5.1:40618132-40618151 | MS.gene78775:CDS | 40.0% | |
| GCATATACCATGCCAAATTG+TGG | - | chr5.1:40616284-40616303 | MS.gene78775:intron | 40.0% | |
| GCTAGATTATAGCGCTATAG+TGG | + | chr5.1:40616777-40616796 | None:intergenic | 40.0% | |
| GGAGGATTTGAAAGAAACCT+TGG | + | chr5.1:40614286-40614305 | None:intergenic | 40.0% | |
| GGATTCATACAGAATCTGGT+GGG | - | chr5.1:40618477-40618496 | MS.gene78775:CDS | 40.0% | |
| GTAAAAAGCTGCTGTCAATG+TGG | - | chr5.1:40616610-40616629 | MS.gene78775:intron | 40.0% | |
| GTCCTAATAGAGGAGAAACT+AGG | + | chr5.1:40617800-40617819 | None:intergenic | 40.0% | |
| TAATTCAAAACAACCTGCGG+AGG | - | chr5.1:40615484-40615503 | MS.gene78775:intron | 40.0% | |
| TACCAATAGTACATCTGCCA+AGG | - | chr5.1:40618505-40618524 | MS.gene78775:CDS | 40.0% | |
| TACCTTGGCAGATGTACTAT+TGG | + | chr5.1:40618510-40618529 | None:intergenic | 40.0% | |
| TCTGCCAAGGTAAGAATCAT+AGG | - | chr5.1:40618518-40618537 | MS.gene78775:CDS | 40.0% | |
| TGCACTAAACATGTAAGGCT+TGG | - | chr5.1:40617239-40617258 | MS.gene78775:intron | 40.0% | |
| TGCCAAGGTAAGAATCATAG+GGG | - | chr5.1:40618520-40618539 | MS.gene78775:CDS | 40.0% | |
| TGGATAGCATTGCAGGAAAA+TGG | + | chr5.1:40617158-40617177 | None:intergenic | 40.0% | |
| TGTCAATGCTTTGTAGCTTG+AGG | - | chr5.1:40614998-40615017 | MS.gene78775:intron | 40.0% | |
| TTCACCAAAACTTCGAAGTC+CGG | - | chr5.1:40615861-40615880 | MS.gene78775:intron | 40.0% | |
| TTGGCAGATGTACTATTGGT+AGG | + | chr5.1:40618506-40618525 | None:intergenic | 40.0% | |
| TTGGGATATTGTTGAGTGAG+GGG | - | chr5.1:40615248-40615267 | MS.gene78775:CDS | 40.0% | |
| TTTGGAAGTTGAGTGAAGGA+TGG | + | chr5.1:40615437-40615456 | None:intergenic | 40.0% | |
| ! | ACAGAGAGTAGTTTTCCCTA+TGG | + | chr5.1:40618401-40618420 | None:intergenic | 40.0% |
| ! | CACCCTTTTATTAGAGGCAA+AGG | - | chr5.1:40615169-40615188 | MS.gene78775:CDS | 40.0% |
| ! | CTTTGATAGCACATTCACTC+AGG | - | chr5.1:40616052-40616071 | MS.gene78775:intron | 40.0% |
| ! | CTTTTATTAGAGGCAAAGGG+TGG | - | chr5.1:40615173-40615192 | MS.gene78775:CDS | 40.0% |
| ! | GATTTAGTGGATAGCATTGC+AGG | + | chr5.1:40617165-40617184 | None:intergenic | 40.0% |
| ! | TGGAACCACCCTTTTATTAG+AGG | - | chr5.1:40615163-40615182 | MS.gene78775:CDS | 40.0% |
| !! | AAGTTTGCTCGACTCTCTTT+TGG | - | chr5.1:40616518-40616537 | MS.gene78775:intron | 40.0% |
| !! | CCATTCCTTAAGGCATTGTT+TGG | + | chr5.1:40615455-40615474 | None:intergenic | 40.0% |
| !! | GCTTTTGACTGAGTAATTGC+TGG | - | chr5.1:40615631-40615650 | MS.gene78775:intron | 40.0% |
| !! | GGCGATAAAGAAGTTTGTTG+AGG | - | chr5.1:40614408-40614427 | MS.gene78775:intron | 40.0% |
| !! | TTGGCTTGGTGTAAACCATA+GGG | - | chr5.1:40618383-40618402 | MS.gene78775:intron | 40.0% |
| AAGACCTAATGAGTGGTCGA+TGG | + | chr5.1:40614139-40614158 | None:intergenic | 45.0% | |
| AAGCTTGATGTCGAGGGTTT+GGG | + | chr5.1:40614172-40614191 | None:intergenic | 45.0% | |
| AAGTAGCTCGATAGCGAAGA+AGG | - | chr5.1:40618653-40618672 | MS.gene78775:CDS | 45.0% | |
| AGATGGGAAGACCTAATGAG+TGG | + | chr5.1:40614146-40614165 | None:intergenic | 45.0% | |
| AGCAGTACCACAATTTGGCA+TGG | + | chr5.1:40616294-40616313 | None:intergenic | 45.0% | |
| AGCGAAGTGTGAGAATCTGT+TGG | - | chr5.1:40614447-40614466 | MS.gene78775:CDS | 45.0% | |
| AGGGTGGTTACATATAGGGA+CGG | - | chr5.1:40615189-40615208 | MS.gene78775:CDS | 45.0% | |
| CAATCCATCGACCACTCATT+AGG | - | chr5.1:40614132-40614151 | MS.gene78775:intron | 45.0% | |
| CACCCCTATGATTCTTACCT+TGG | + | chr5.1:40618525-40618544 | None:intergenic | 45.0% | |
| CCAAACCACTGTATAGCATC+AGG | + | chr5.1:40615668-40615687 | None:intergenic | 45.0% | |
| CCTGATGCTATACAGTGGTT+TGG | - | chr5.1:40615665-40615684 | MS.gene78775:intron | 45.0% | |
| CGAAGTGTGAGAATCTGTTG+GGG | - | chr5.1:40614449-40614468 | MS.gene78775:CDS | 45.0% | |
| CTACATCAGCCATCAGAAAC+CGG | + | chr5.1:40617839-40617858 | None:intergenic | 45.0% | |
| CTATCCACTAAATCACACCG+TGG | - | chr5.1:40617171-40617190 | MS.gene78775:intron | 45.0% | |
| CTCCTCTATTAGGACAGTAG+CGG | - | chr5.1:40617805-40617824 | MS.gene78775:intron | 45.0% | |
| CTCTCTCTTTCTCAGAGAGA+GGG | - | chr5.1:40615526-40615545 | MS.gene78775:intron | 45.0% | |
| GAGAAAGAGAGAGAGAGAGA+AGG | + | chr5.1:40615519-40615538 | None:intergenic | 45.0% | |
| GATATTGTTGAGTGAGGGGA+AGG | - | chr5.1:40615252-40615271 | MS.gene78775:CDS | 45.0% | |
| GCATTGTAGAGAACTGGAGA+AGG | - | chr5.1:40614471-40614490 | MS.gene78775:CDS | 45.0% | |
| GCCTAAAATCCACTATGTGC+AGG | + | chr5.1:40618075-40618094 | None:intergenic | 45.0% | |
| GCGAAGTGTGAGAATCTGTT+GGG | - | chr5.1:40614448-40614467 | MS.gene78775:CDS | 45.0% | |
| GGCAAAGGGTGGTTACATAT+AGG | - | chr5.1:40615184-40615203 | MS.gene78775:CDS | 45.0% | |
| GGCTGATGTAGCAACAATAG+CGG | - | chr5.1:40617848-40617867 | MS.gene78775:intron | 45.0% | |
| TAACCTCGACAAAGCTGAAG+AGG | - | chr5.1:40618291-40618310 | MS.gene78775:CDS | 45.0% | |
| TAAGCTCGAAAGAGCTGAAG+AGG | - | chr5.1:40617444-40617463 | MS.gene78775:intron | 45.0% | |
| TACACCCTGATGCTATACAG+TGG | - | chr5.1:40615660-40615679 | MS.gene78775:intron | 45.0% | |
| TCTCTCTCTTTCTCAGAGAG+AGG | - | chr5.1:40615525-40615544 | MS.gene78775:intron | 45.0% | |
| TGACTGAGTAATTGCTGGGA+TGG | - | chr5.1:40615636-40615655 | MS.gene78775:intron | 45.0% | |
| TGGGATGTTGGAACGTGATT+TGG | - | chr5.1:40614582-40614601 | MS.gene78775:intron | 45.0% | |
| TGGTTACATATAGGGACGGA+GGG | - | chr5.1:40615193-40615212 | MS.gene78775:CDS | 45.0% | |
| ! | GTATGAAGCGTCTGTGAATG+CGG | - | chr5.1:40614384-40614403 | MS.gene78775:intron | 45.0% |
| ! | TGGAAGAGACATGATGGTGA+TGG | + | chr5.1:40614088-40614107 | None:intergenic | 45.0% |
| !! | ATGAAATCGTCGATTTCGGG+TGG | + | chr5.1:40614108-40614127 | None:intergenic | 45.0% |
| !! | ATGGAATGACTGACTTGGCT+TGG | - | chr5.1:40618369-40618388 | MS.gene78775:intron | 45.0% |
| !! | CTTGGCTTGGTGTAAACCAT+AGG | - | chr5.1:40618382-40618401 | MS.gene78775:intron | 45.0% |
| !! | GAGAAACTAGGAAAGTGCTG+TGG | + | chr5.1:40617788-40617807 | None:intergenic | 45.0% |
| !! | GATGGTGATGGTGTTGTTGT+CGG | + | chr5.1:40614076-40614095 | None:intergenic | 45.0% |
| !!! | CCCTGCACATAGTGGATTTT+AGG | - | chr5.1:40618071-40618090 | MS.gene78775:intron | 45.0% |
| !! | AAAAAAATAATGTAAAAATA+AGG | + | chr5.1:40616686-40616705 | None:intergenic | 5.0% |
| AAAGAGCTGAAGAGGAGGTG+AGG | - | chr5.1:40617452-40617471 | MS.gene78775:intron | 50.0% | |
| AAGCTGCTGTCAATGTGGAG+CGG | - | chr5.1:40616615-40616634 | MS.gene78775:intron | 50.0% | |
| ACAAAGCTGAAGAGGAGGTG+AGG | - | chr5.1:40618299-40618318 | MS.gene78775:CDS | 50.0% | |
| AGAGAGAGAGAGAAGGGATC+AGG | + | chr5.1:40615512-40615531 | None:intergenic | 50.0% | |
| AGCGGAACGCCTAAAATCCA+CGG | + | chr5.1:40617191-40617210 | None:intergenic | 50.0% | |
| AGGGTGGTTCCATATAGGGA+CGG | + | chr5.1:40615155-40615174 | None:intergenic | 50.0% | |
| ATCCACTATGTGCAGGGAAG+AGG | + | chr5.1:40618068-40618087 | None:intergenic | 50.0% | |
| ATGAAGCTGAAGAAGGAGCG+AGG | - | chr5.1:40614542-40614561 | MS.gene78775:intron | 50.0% | |
| CGAGCTACTTGTCTTGGAAC+TGG | + | chr5.1:40618643-40618662 | None:intergenic | 50.0% | |
| CGCTATCGAGCTACTTGTCT+TGG | + | chr5.1:40618649-40618668 | None:intergenic | 50.0% | |
| CTACATCAGCCAGTAGAAGC+CGG | + | chr5.1:40616874-40616893 | None:intergenic | 50.0% | |
| CTCTTTCTCAGAGAGAGGGA+GGG | - | chr5.1:40615530-40615549 | MS.gene78775:intron | 50.0% | |
| CTTCTTCGGCAAGCACACAT+GGG | - | chr5.1:40616490-40616509 | MS.gene78775:intron | 50.0% | |
| GAAGCTTGATGTCGAGGGTT+TGG | + | chr5.1:40614173-40614192 | None:intergenic | 50.0% | |
| GGCTGATGTAGCAACAGTAG+CGG | - | chr5.1:40616883-40616902 | MS.gene78775:intron | 50.0% | |
| GTGGTTACATATAGGGACGG+AGG | - | chr5.1:40615192-40615211 | MS.gene78775:CDS | 50.0% | |
| GTTGAGTGAGGGGAAGGAAA+GGG | - | chr5.1:40615258-40615277 | MS.gene78775:CDS | 50.0% | |
| TCTCTTTCTCAGAGAGAGGG+AGG | - | chr5.1:40615529-40615548 | MS.gene78775:intron | 50.0% | |
| TCTTCTTCGGCAAGCACACA+TGG | - | chr5.1:40616489-40616508 | MS.gene78775:intron | 50.0% | |
| TCTTTCTCAGAGAGAGGGAG+GGG | - | chr5.1:40615531-40615550 | MS.gene78775:intron | 50.0% | |
| TGACCTCCTTGACTCTCTTG+TGG | - | chr5.1:40617480-40617499 | MS.gene78775:intron | 50.0% | |
| TGAGGGGAAGGAAAGGGAAA+GGG | - | chr5.1:40615264-40615283 | MS.gene78775:CDS | 50.0% | |
| TGCTAAGTCAGGACCCAACT+TGG | - | chr5.1:40616310-40616329 | MS.gene78775:intron | 50.0% | |
| TGGTTCCATATAGGGACGGA+GGG | + | chr5.1:40615151-40615170 | None:intergenic | 50.0% | |
| TGTATCCCTCCGTCCCTATA+TGG | - | chr5.1:40615143-40615162 | MS.gene78775:intron | 50.0% | |
| TGTTGAGTGAGGGGAAGGAA+AGG | - | chr5.1:40615257-40615276 | MS.gene78775:CDS | 50.0% | |
| TTCGGGTGGAAGAGACATGA+TGG | + | chr5.1:40614094-40614113 | None:intergenic | 50.0% | |
| TTCTTCGGCAAGCACACATG+GGG | - | chr5.1:40616491-40616510 | MS.gene78775:intron | 50.0% | |
| ! | CAAATACTCAGTGACGGAGC+CGG | + | chr5.1:40615883-40615902 | None:intergenic | 50.0% |
| !! | GTTGGGGCATTGTAGAGAAC+TGG | - | chr5.1:40614465-40614484 | MS.gene78775:CDS | 50.0% |
| AGCTGAAGAAGGAGCGAGGA+AGG | - | chr5.1:40614546-40614565 | MS.gene78775:intron | 55.0% | |
| AGCTGCTGTCAATGTGGAGC+GGG | - | chr5.1:40616616-40616635 | MS.gene78775:intron | 55.0% | |
| AGGCACGAAGCTTGATGTCG+AGG | + | chr5.1:40614179-40614198 | None:intergenic | 55.0% | |
| CCTCGACAAAGCTGAAGAGG+AGG | - | chr5.1:40618294-40618313 | MS.gene78775:CDS | 55.0% | |
| CGGCTCCGTCACTGAGTATT+TGG | - | chr5.1:40615881-40615900 | MS.gene78775:intron | 55.0% | |
| CTGCCACAAGAGAGTCAAGG+AGG | + | chr5.1:40617486-40617505 | None:intergenic | 55.0% | |
| CTGCTGCCACAAGAGAGTCA+AGG | + | chr5.1:40617489-40617508 | None:intergenic | 55.0% | |
| CTGTCAATGTGGAGCGAGTG+AGG | - | chr5.1:40616621-40616640 | MS.gene78775:intron | 55.0% | |
| CTGTCAATGTGGAGCGGGTA+AGG | - | chr5.1:40617583-40617602 | MS.gene78775:intron | 55.0% | |
| CTTGATGTCGAGGGTTTGGG+AGG | + | chr5.1:40614169-40614188 | None:intergenic | 55.0% | |
| CTTTCTCAGAGAGAGGGAGG+GGG | - | chr5.1:40615532-40615551 | MS.gene78775:intron | 55.0% | |
| GCTCGAAAGAGCTGAAGAGG+AGG | - | chr5.1:40617447-40617466 | MS.gene78775:intron | 55.0% | |
| GGCACGAAGCTTGATGTCGA+GGG | + | chr5.1:40614178-40614197 | None:intergenic | 55.0% | |
| GGCCGCTACTGTCCTAATAG+AGG | + | chr5.1:40617810-40617829 | None:intergenic | 55.0% | |
| GGGGGGAGAATATGCCGTAA+GGG | - | chr5.1:40615566-40615585 | MS.gene78775:intron | 55.0% | |
| GTGAGGGGAAGGAAAGGGAA+AGG | - | chr5.1:40615263-40615282 | MS.gene78775:CDS | 55.0% | |
| GTGGTTCCATATAGGGACGG+AGG | + | chr5.1:40615152-40615171 | None:intergenic | 55.0% | |
| GTGTTTGCGAGCTGGGATGT+TGG | - | chr5.1:40614570-40614589 | MS.gene78775:intron | 55.0% | |
| TCGAGGGTTTGGGAGGAGAT+GGG | + | chr5.1:40614162-40614181 | None:intergenic | 55.0% | |
| TGCCTCTTCCCTGCACATAG+TGG | - | chr5.1:40618063-40618082 | MS.gene78775:intron | 55.0% | |
| TTTCTCAGAGAGAGGGAGGG+GGG | - | chr5.1:40615533-40615552 | MS.gene78775:intron | 55.0% | |
| ! | CCTCCTCTTCAGCTTTGTCG+AGG | + | chr5.1:40618297-40618316 | None:intergenic | 55.0% |
| ! | GAGAAACTAGGACGGTGTCG+TGG | + | chr5.1:40616826-40616845 | None:intergenic | 55.0% |
| ! | GGAGCCGGACTTCGAAGTTT+TGG | + | chr5.1:40615868-40615887 | None:intergenic | 55.0% |
| ! | TGAAGCGTCTGTGAATGCGG+TGG | - | chr5.1:40614387-40614406 | MS.gene78775:intron | 55.0% |
| AAGGGATCAGGTTCCTCCGC+AGG | + | chr5.1:40615500-40615519 | None:intergenic | 60.0% | |
| GCCACTGCTCCGGTTTCTGA+TGG | - | chr5.1:40617827-40617846 | MS.gene78775:intron | 60.0% | |
| GCCAGTAGAAGCCGGAACAG+CGG | + | chr5.1:40616866-40616885 | None:intergenic | 60.0% | |
| GCCATCAGAAACCGGAGCAG+TGG | + | chr5.1:40617831-40617850 | None:intergenic | 60.0% | |
| GGGGGGGAGAATATGCCGTA+AGG | - | chr5.1:40615565-40615584 | MS.gene78775:intron | 60.0% | |
| GTCGAGGGTTTGGGAGGAGA+TGG | + | chr5.1:40614163-40614182 | None:intergenic | 60.0% | |
| TTCGGCAAGCACACATGGGG+AGG | - | chr5.1:40616494-40616513 | MS.gene78775:intron | 60.0% | |
| TTCTCAGAGAGAGGGAGGGG+GGG | - | chr5.1:40615534-40615553 | MS.gene78775:intron | 60.0% | |
| ! | AGGAAGGCGTGTTTGCGAGC+TGG | - | chr5.1:40614562-40614581 | MS.gene78775:intron | 60.0% |
| ! | GGAAGGCGTGTTTGCGAGCT+GGG | - | chr5.1:40614563-40614582 | MS.gene78775:intron | 60.0% |
| GACAGTAGCGGCCACTGCTC+CGG | - | chr5.1:40617817-40617836 | MS.gene78775:intron | 65.0% | |
| GCCGCTGTTCCGGCTTCTAC+TGG | - | chr5.1:40616862-40616881 | MS.gene78775:intron | 65.0% | |
| GGCAATAGCGGCCGCTGTTC+CGG | - | chr5.1:40616852-40616871 | MS.gene78775:intron | 65.0% | |
| TCTCAGAGAGAGGGAGGGGG+GGG | - | chr5.1:40615535-40615554 | MS.gene78775:intron | 65.0% | |
| CTCAGAGAGAGGGAGGGGGG+GGG | - | chr5.1:40615536-40615555 | MS.gene78775:intron | 70.0% | |
| TCAGAGAGAGGGAGGGGGGG+GGG | - | chr5.1:40615537-40615556 | MS.gene78775:intron | 70.0% | |
| AGAGAGAGGGAGGGGGGGGG+GGG | - | chr5.1:40615539-40615558 | MS.gene78775:intron | 75.0% | |
| CAGAGAGAGGGAGGGGGGGG+GGG | - | chr5.1:40615538-40615557 | MS.gene78775:intron | 75.0% | |
| ! | AGAGAGGGAGGGGGGGGGGG+GGG | - | chr5.1:40615541-40615560 | MS.gene78775:intron | 80.0% |
| ! | GAGAGAGGGAGGGGGGGGGG+GGG | - | chr5.1:40615540-40615559 | MS.gene78775:intron | 80.0% |
| ! | AGAGGGAGGGGGGGGGGGGG+GGG | - | chr5.1:40615543-40615562 | MS.gene78775:intron | 85.0% |
| ! | GAGAGGGAGGGGGGGGGGGG+GGG | - | chr5.1:40615542-40615561 | MS.gene78775:intron | 85.0% |
| ! | AGGGAGGGGGGGGGGGGGGG+GGG | - | chr5.1:40615545-40615564 | MS.gene78775:intron | 90.0% |
| ! | GAGGGAGGGGGGGGGGGGGG+GGG | - | chr5.1:40615544-40615563 | MS.gene78775:intron | 90.0% |
| ! | AGGGGGGGGGGGGGGGGGGG+GGG | - | chr5.1:40615549-40615568 | MS.gene78775:intron | 95.0% |
| ! | GAGGGGGGGGGGGGGGGGGG+GGG | - | chr5.1:40615548-40615567 | MS.gene78775:intron | 95.0% |
| ! | GGAGGGGGGGGGGGGGGGGG+GGG | - | chr5.1:40615547-40615566 | MS.gene78775:intron | 95.0% |
| ! | GGGAGGGGGGGGGGGGGGGG+GGG | - | chr5.1:40615546-40615565 | MS.gene78775:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 40614045 | 40618710 | 40614045 | ID=MS.gene78775 |
| chr5.1 | mRNA | 40614045 | 40618710 | 40614045 | ID=MS.gene78775.t1;Parent=MS.gene78775 |
| chr5.1 | exon | 40618468 | 40618710 | 40618468 | ID=MS.gene78775.t1.exon1;Parent=MS.gene78775.t1 |
| chr5.1 | CDS | 40618468 | 40618710 | 40618468 | ID=cds.MS.gene78775.t1;Parent=MS.gene78775.t1 |
| chr5.1 | exon | 40618104 | 40618370 | 40618104 | ID=MS.gene78775.t1.exon2;Parent=MS.gene78775.t1 |
| chr5.1 | CDS | 40618104 | 40618370 | 40618104 | ID=cds.MS.gene78775.t1;Parent=MS.gene78775.t1 |
| chr5.1 | exon | 40616118 | 40616272 | 40616118 | ID=MS.gene78775.t1.exon3;Parent=MS.gene78775.t1 |
| chr5.1 | CDS | 40616118 | 40616272 | 40616118 | ID=cds.MS.gene78775.t1;Parent=MS.gene78775.t1 |
| chr5.1 | exon | 40615156 | 40615392 | 40615156 | ID=MS.gene78775.t1.exon4;Parent=MS.gene78775.t1 |
| chr5.1 | CDS | 40615156 | 40615392 | 40615156 | ID=cds.MS.gene78775.t1;Parent=MS.gene78775.t1 |
| chr5.1 | exon | 40614440 | 40614545 | 40614440 | ID=MS.gene78775.t1.exon5;Parent=MS.gene78775.t1 |
| chr5.1 | CDS | 40614440 | 40614545 | 40614440 | ID=cds.MS.gene78775.t1;Parent=MS.gene78775.t1 |
| chr5.1 | exon | 40614229 | 40614351 | 40614229 | ID=MS.gene78775.t1.exon6;Parent=MS.gene78775.t1 |
| chr5.1 | CDS | 40614229 | 40614351 | 40614229 | ID=cds.MS.gene78775.t1;Parent=MS.gene78775.t1 |
| chr5.1 | exon | 40614045 | 40614131 | 40614045 | ID=MS.gene78775.t1.exon7;Parent=MS.gene78775.t1 |
| chr5.1 | CDS | 40614045 | 40614131 | 40614045 | ID=cds.MS.gene78775.t1;Parent=MS.gene78775.t1 |
| Gene Sequence |
| Protein sequence |
