Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97490.t1 | XP_024639981.1 | 96.3 | 518 | 18 | 1 | 1 | 517 | 1 | 518 | 3.30E-267 | 930.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97490.t1 | Q9CAA9 | 39.3 | 514 | 235 | 12 | 1 | 512 | 3 | 441 | 3.2e-61 | 237.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97490.t1 | A0A072UE55 | 96.3 | 518 | 18 | 1 | 1 | 517 | 1 | 518 | 2.4e-267 | 930.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene97490.t1 | TF | bHLH |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049190 | MS.gene97490 | 0.803701 | 3.07E-49 | -1.69E-46 |
| MS.gene049254 | MS.gene97490 | 0.806566 | 7.73E-50 | -1.69E-46 |
| MS.gene049404 | MS.gene97490 | 0.863353 | 2.65E-64 | -1.69E-46 |
| MS.gene049711 | MS.gene97490 | 0.813879 | 2.05E-51 | -1.69E-46 |
| MS.gene050026 | MS.gene97490 | 0.821504 | 3.90E-53 | -1.69E-46 |
| MS.gene05016 | MS.gene97490 | 0.803981 | 2.69E-49 | -1.69E-46 |
| MS.gene050273 | MS.gene97490 | 0.806421 | 8.30E-50 | -1.69E-46 |
| MS.gene050559 | MS.gene97490 | 0.818263 | 2.15E-52 | -1.69E-46 |
| MS.gene050561 | MS.gene97490 | 0.816137 | 6.46E-52 | -1.69E-46 |
| MS.gene050562 | MS.gene97490 | 0.805822 | 1.11E-49 | -1.69E-46 |
| MS.gene050807 | MS.gene97490 | 0.805469 | 1.32E-49 | -1.69E-46 |
| MS.gene051198 | MS.gene97490 | 0.828413 | 9.12E-55 | -1.69E-46 |
| MS.gene051279 | MS.gene97490 | 0.840368 | 9.07E-58 | -1.69E-46 |
| MS.gene051719 | MS.gene97490 | 0.812087 | 5.06E-51 | -1.69E-46 |
| MS.gene051720 | MS.gene97490 | 0.804306 | 2.30E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene97490 | 0.834948 | 2.23E-56 | -1.69E-46 |
| MS.gene051859 | MS.gene97490 | 0.817852 | 2.66E-52 | -1.69E-46 |
| MS.gene052037 | MS.gene97490 | 0.825069 | 5.73E-54 | -1.69E-46 |
| MS.gene052239 | MS.gene97490 | -0.802555 | 5.31E-49 | -1.69E-46 |
| MS.gene052519 | MS.gene97490 | 0.806305 | 8.78E-50 | -1.69E-46 |
| MS.gene052582 | MS.gene97490 | 0.819282 | 1.26E-52 | -1.69E-46 |
| MS.gene052584 | MS.gene97490 | 0.820427 | 6.90E-53 | -1.69E-46 |
| MS.gene052611 | MS.gene97490 | 0.816117 | 6.52E-52 | -1.69E-46 |
| MS.gene052616 | MS.gene97490 | 0.83979 | 1.28E-57 | -1.69E-46 |
| MS.gene053144 | MS.gene97490 | 0.813084 | 3.06E-51 | -1.69E-46 |
| MS.gene053226 | MS.gene97490 | 0.812723 | 3.67E-51 | -1.69E-46 |
| MS.gene053565 | MS.gene97490 | 0.816388 | 5.68E-52 | -1.69E-46 |
| MS.gene053998 | MS.gene97490 | 0.803557 | 3.29E-49 | -1.69E-46 |
| MS.gene054584 | MS.gene97490 | 0.81938 | 1.20E-52 | -1.69E-46 |
| MS.gene054651 | MS.gene97490 | 0.833061 | 6.62E-56 | -1.69E-46 |
| MS.gene055357 | MS.gene97490 | 0.806089 | 9.74E-50 | -1.69E-46 |
| MS.gene055464 | MS.gene97490 | 0.822939 | 1.81E-53 | -1.69E-46 |
| MS.gene055512 | MS.gene97490 | 0.808762 | 2.64E-50 | -1.69E-46 |
| MS.gene056050 | MS.gene97490 | 0.840131 | 1.05E-57 | -1.69E-46 |
| MS.gene056366 | MS.gene97490 | 0.847717 | 9.69E-60 | -1.69E-46 |
| MS.gene056542 | MS.gene97490 | 0.807863 | 4.11E-50 | -1.69E-46 |
| MS.gene056543 | MS.gene97490 | 0.806811 | 6.86E-50 | -1.69E-46 |
| MS.gene056545 | MS.gene97490 | 0.807204 | 5.67E-50 | -1.69E-46 |
| MS.gene056553 | MS.gene97490 | 0.828719 | 7.69E-55 | -1.69E-46 |
| MS.gene057060 | MS.gene97490 | 0.802822 | 4.68E-49 | -1.69E-46 |
| MS.gene057314 | MS.gene97490 | 0.813161 | 2.94E-51 | -1.69E-46 |
| MS.gene057444 | MS.gene97490 | 0.849959 | 2.31E-60 | -1.69E-46 |
| MS.gene058009 | MS.gene97490 | 0.809211 | 2.12E-50 | -1.69E-46 |
| MS.gene058625 | MS.gene97490 | 0.845372 | 4.23E-59 | -1.69E-46 |
| MS.gene058829 | MS.gene97490 | 0.800301 | 1.54E-48 | -1.69E-46 |
| MS.gene058979 | MS.gene97490 | 0.804345 | 2.26E-49 | -1.69E-46 |
| MS.gene059015 | MS.gene97490 | 0.831041 | 2.09E-55 | -1.69E-46 |
| MS.gene059584 | MS.gene97490 | 0.811464 | 6.91E-51 | -1.69E-46 |
| MS.gene059625 | MS.gene97490 | 0.807168 | 5.77E-50 | -1.69E-46 |
| MS.gene060322 | MS.gene97490 | 0.805211 | 1.49E-49 | -1.69E-46 |
| MS.gene060587 | MS.gene97490 | 0.804035 | 2.62E-49 | -1.69E-46 |
| MS.gene060603 | MS.gene97490 | 0.801941 | 7.10E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97490.t1 | MTR_5g048860 | 97.104 | 518 | 14 | 1 | 1 | 517 | 1 | 518 | 0.0 | 1028 |
| MS.gene97490.t1 | MTR_8g065740 | 58.286 | 525 | 145 | 14 | 1 | 517 | 1 | 459 | 0.0 | 530 |
| MS.gene97490.t1 | MTR_1g017350 | 54.680 | 203 | 65 | 5 | 296 | 474 | 191 | 390 | 4.74e-56 | 194 |
| MS.gene97490.t1 | MTR_1g017350 | 54.680 | 203 | 65 | 5 | 296 | 474 | 191 | 390 | 8.43e-56 | 194 |
| MS.gene97490.t1 | MTR_8g012290 | 37.602 | 367 | 171 | 12 | 140 | 491 | 93 | 416 | 6.23e-54 | 190 |
| MS.gene97490.t1 | MTR_8g012290 | 37.602 | 367 | 171 | 12 | 140 | 491 | 93 | 416 | 6.83e-54 | 190 |
| MS.gene97490.t1 | MTR_1g017350 | 54.500 | 200 | 67 | 5 | 296 | 474 | 191 | 387 | 2.27e-53 | 187 |
| MS.gene97490.t1 | MTR_7g053410 | 55.838 | 197 | 70 | 6 | 318 | 511 | 274 | 456 | 2.74e-53 | 189 |
| MS.gene97490.t1 | MTR_1g017350 | 54.500 | 200 | 67 | 5 | 296 | 474 | 191 | 387 | 3.85e-53 | 186 |
| MS.gene97490.t1 | MTR_7g053410 | 55.838 | 197 | 70 | 6 | 318 | 511 | 274 | 456 | 4.67e-53 | 189 |
| MS.gene97490.t1 | MTR_3g116770 | 60.736 | 163 | 53 | 4 | 346 | 500 | 173 | 332 | 1.91e-51 | 181 |
| MS.gene97490.t1 | MTR_3g116770 | 60.736 | 163 | 53 | 4 | 346 | 500 | 173 | 332 | 2.09e-51 | 181 |
| MS.gene97490.t1 | MTR_4g070320 | 79.412 | 102 | 18 | 1 | 352 | 453 | 134 | 232 | 2.42e-47 | 169 |
| MS.gene97490.t1 | MTR_8g062240 | 76.344 | 93 | 22 | 0 | 361 | 453 | 148 | 240 | 5.95e-41 | 149 |
| MS.gene97490.t1 | MTR_7g092510 | 73.913 | 92 | 24 | 0 | 358 | 449 | 167 | 258 | 1.53e-40 | 150 |
| MS.gene97490.t1 | MTR_3g498825 | 74.227 | 97 | 22 | 1 | 355 | 448 | 138 | 234 | 1.98e-39 | 147 |
| MS.gene97490.t1 | MTR_8g099880 | 76.289 | 97 | 19 | 3 | 361 | 454 | 142 | 237 | 2.19e-39 | 146 |
| MS.gene97490.t1 | MTR_5g037250 | 72.917 | 96 | 25 | 1 | 342 | 437 | 91 | 185 | 4.35e-39 | 143 |
| MS.gene97490.t1 | MTR_1g059270 | 70.330 | 91 | 27 | 0 | 361 | 451 | 157 | 247 | 5.30e-39 | 143 |
| MS.gene97490.t1 | MTR_1g059270 | 70.787 | 89 | 26 | 0 | 361 | 449 | 157 | 245 | 6.99e-38 | 142 |
| MS.gene97490.t1 | MTR_6g084120 | 55.446 | 101 | 35 | 2 | 344 | 444 | 136 | 226 | 4.35e-25 | 105 |
| MS.gene97490.t1 | MTR_4g131160 | 65.753 | 73 | 24 | 1 | 357 | 429 | 189 | 260 | 4.00e-21 | 96.3 |
| MS.gene97490.t1 | MTR_4g131160 | 65.753 | 73 | 24 | 1 | 357 | 429 | 192 | 263 | 4.48e-21 | 95.9 |
| MS.gene97490.t1 | MTR_1g080890 | 68.182 | 66 | 20 | 1 | 364 | 429 | 193 | 257 | 7.80e-20 | 91.7 |
| MS.gene97490.t1 | MTR_4g033295 | 56.923 | 65 | 28 | 0 | 364 | 428 | 118 | 182 | 2.22e-15 | 75.1 |
| MS.gene97490.t1 | MTR_4g033295 | 55.224 | 67 | 29 | 1 | 364 | 429 | 118 | 184 | 3.80e-15 | 74.3 |
| MS.gene97490.t1 | MTR_7g092540 | 50.000 | 74 | 37 | 0 | 364 | 437 | 243 | 316 | 1.15e-14 | 75.5 |
| MS.gene97490.t1 | MTR_1g052470 | 53.623 | 69 | 32 | 0 | 364 | 432 | 298 | 366 | 1.24e-14 | 76.3 |
| MS.gene97490.t1 | MTR_4g065870 | 56.923 | 65 | 28 | 0 | 364 | 428 | 355 | 419 | 1.84e-14 | 76.3 |
| MS.gene97490.t1 | MTR_2g098310 | 44.048 | 84 | 39 | 1 | 359 | 434 | 319 | 402 | 2.03e-14 | 75.9 |
| MS.gene97490.t1 | MTR_2g098310 | 48.052 | 77 | 32 | 1 | 359 | 427 | 319 | 395 | 5.84e-14 | 74.3 |
| MS.gene97490.t1 | MTR_7g092540 | 53.125 | 64 | 30 | 0 | 364 | 427 | 243 | 306 | 5.96e-14 | 73.2 |
| MS.gene97490.t1 | MTR_1g069155 | 54.688 | 64 | 28 | 1 | 366 | 429 | 319 | 381 | 6.79e-14 | 74.7 |
| MS.gene97490.t1 | MTR_4g065870 | 56.452 | 62 | 27 | 0 | 364 | 425 | 355 | 416 | 9.66e-14 | 73.6 |
| MS.gene97490.t1 | MTR_1g070870 | 63.636 | 66 | 23 | 1 | 364 | 429 | 120 | 184 | 2.24e-13 | 71.2 |
| MS.gene97490.t1 | MTR_1g070870 | 63.636 | 66 | 23 | 1 | 364 | 429 | 123 | 187 | 2.43e-13 | 71.2 |
| MS.gene97490.t1 | MTR_3g028520 | 44.086 | 93 | 47 | 1 | 336 | 428 | 299 | 386 | 9.05e-13 | 70.5 |
| MS.gene97490.t1 | MTR_3g027650 | 44.086 | 93 | 47 | 1 | 336 | 428 | 299 | 386 | 9.05e-13 | 70.5 |
| MS.gene97490.t1 | MTR_1g084980 | 31.618 | 136 | 77 | 2 | 303 | 438 | 416 | 535 | 2.17e-12 | 70.5 |
| MS.gene97490.t1 | MTR_7g099540 | 52.381 | 63 | 29 | 1 | 367 | 429 | 255 | 316 | 2.33e-12 | 69.7 |
| MS.gene97490.t1 | MTR_3g027650 | 44.444 | 90 | 45 | 1 | 336 | 425 | 299 | 383 | 6.06e-12 | 68.2 |
| MS.gene97490.t1 | MTR_3g449770 | 51.562 | 64 | 30 | 1 | 366 | 429 | 311 | 373 | 6.70e-12 | 68.6 |
| MS.gene97490.t1 | MTR_1g018090 | 50.769 | 65 | 31 | 1 | 364 | 428 | 274 | 337 | 2.26e-11 | 65.9 |
| MS.gene97490.t1 | MTR_8g036235 | 41.026 | 78 | 38 | 1 | 359 | 428 | 303 | 380 | 3.12e-11 | 65.9 |
| MS.gene97490.t1 | MTR_1g019240 | 46.154 | 65 | 34 | 1 | 366 | 430 | 87 | 150 | 3.14e-11 | 64.7 |
| MS.gene97490.t1 | MTR_7g099540 | 48.438 | 64 | 32 | 1 | 366 | 429 | 254 | 316 | 6.60e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97490.t1 | AT1G68920 | 43.762 | 521 | 201 | 18 | 1 | 512 | 3 | 440 | 2.86e-110 | 338 |
| MS.gene97490.t1 | AT1G68920 | 43.678 | 522 | 201 | 19 | 1 | 512 | 3 | 441 | 1.50e-108 | 333 |
| MS.gene97490.t1 | AT1G68920 | 43.678 | 522 | 201 | 19 | 1 | 512 | 3 | 441 | 1.50e-108 | 333 |
| MS.gene97490.t1 | AT1G68920 | 43.678 | 522 | 201 | 19 | 1 | 512 | 3 | 441 | 1.50e-108 | 333 |
| MS.gene97490.t1 | AT1G26260 | 38.528 | 462 | 154 | 15 | 62 | 520 | 34 | 368 | 9.36e-70 | 229 |
| MS.gene97490.t1 | AT1G26260 | 38.528 | 462 | 154 | 15 | 62 | 520 | 34 | 368 | 9.36e-70 | 229 |
| MS.gene97490.t1 | AT1G26260 | 38.528 | 462 | 154 | 15 | 62 | 520 | 34 | 368 | 9.36e-70 | 229 |
| MS.gene97490.t1 | AT1G26260 | 38.528 | 462 | 154 | 15 | 62 | 520 | 34 | 368 | 9.36e-70 | 229 |
| MS.gene97490.t1 | AT1G26260 | 41.755 | 376 | 127 | 12 | 148 | 520 | 60 | 346 | 4.94e-65 | 216 |
| MS.gene97490.t1 | AT1G26260 | 49.071 | 269 | 97 | 7 | 253 | 520 | 88 | 317 | 8.62e-63 | 209 |
| MS.gene97490.t1 | AT1G10120 | 61.589 | 151 | 51 | 2 | 314 | 463 | 161 | 305 | 2.20e-52 | 183 |
| MS.gene97490.t1 | AT1G10120 | 61.589 | 151 | 51 | 2 | 314 | 463 | 161 | 305 | 2.20e-52 | 183 |
| MS.gene97490.t1 | AT3G07340 | 53.333 | 180 | 62 | 3 | 277 | 451 | 183 | 345 | 6.22e-49 | 176 |
| MS.gene97490.t1 | AT3G07340 | 53.333 | 180 | 62 | 3 | 277 | 451 | 183 | 345 | 1.27e-48 | 175 |
| MS.gene97490.t1 | AT4G34530 | 69.565 | 115 | 30 | 2 | 358 | 467 | 166 | 280 | 8.44e-46 | 164 |
| MS.gene97490.t1 | AT5G48560 | 75.962 | 104 | 22 | 2 | 351 | 451 | 286 | 389 | 1.43e-45 | 167 |
| MS.gene97490.t1 | AT5G48560 | 75.962 | 104 | 22 | 2 | 351 | 451 | 286 | 389 | 2.31e-45 | 167 |
| MS.gene97490.t1 | AT3G23690 | 53.977 | 176 | 68 | 5 | 296 | 460 | 112 | 285 | 8.56e-45 | 162 |
| MS.gene97490.t1 | AT1G59640 | 46.809 | 188 | 90 | 4 | 266 | 451 | 44 | 223 | 1.92e-41 | 152 |
| MS.gene97490.t1 | AT1G59640 | 55.782 | 147 | 62 | 2 | 309 | 453 | 80 | 225 | 2.18e-41 | 150 |
| MS.gene97490.t1 | AT2G42300 | 70.968 | 93 | 27 | 0 | 358 | 450 | 179 | 271 | 4.92e-41 | 149 |
| MS.gene97490.t1 | AT2G18300 | 39.662 | 237 | 126 | 6 | 298 | 523 | 122 | 352 | 4.21e-40 | 149 |
| MS.gene97490.t1 | AT2G18300 | 52.632 | 152 | 67 | 3 | 298 | 448 | 122 | 269 | 4.30e-40 | 149 |
| MS.gene97490.t1 | AT2G18300 | 52.632 | 152 | 67 | 3 | 298 | 448 | 122 | 269 | 4.88e-40 | 149 |
| MS.gene97490.t1 | AT2G42300 | 71.739 | 92 | 26 | 0 | 358 | 449 | 179 | 270 | 7.55e-40 | 148 |
| MS.gene97490.t1 | AT5G50915 | 56.463 | 147 | 59 | 4 | 345 | 490 | 117 | 259 | 9.30e-40 | 146 |
| MS.gene97490.t1 | AT5G50915 | 56.463 | 147 | 59 | 4 | 345 | 490 | 117 | 259 | 9.30e-40 | 146 |
| MS.gene97490.t1 | AT3G57800 | 72.826 | 92 | 25 | 0 | 358 | 449 | 198 | 289 | 9.65e-40 | 149 |
| MS.gene97490.t1 | AT5G50915 | 56.463 | 147 | 59 | 4 | 345 | 490 | 117 | 259 | 1.17e-39 | 146 |
| MS.gene97490.t1 | AT5G50915 | 56.463 | 147 | 59 | 4 | 345 | 490 | 117 | 259 | 1.17e-39 | 146 |
| MS.gene97490.t1 | AT4G36540 | 52.866 | 157 | 64 | 3 | 308 | 457 | 81 | 234 | 3.34e-39 | 145 |
| MS.gene97490.t1 | AT4G36540 | 54.730 | 148 | 57 | 3 | 308 | 448 | 81 | 225 | 7.15e-39 | 144 |
| MS.gene97490.t1 | AT5G62610 | 61.905 | 105 | 39 | 1 | 332 | 435 | 120 | 224 | 1.49e-35 | 135 |
| MS.gene97490.t1 | AT5G62610 | 61.905 | 105 | 39 | 1 | 332 | 435 | 120 | 224 | 1.49e-35 | 135 |
| MS.gene97490.t1 | AT1G18400 | 71.084 | 83 | 24 | 0 | 362 | 444 | 143 | 225 | 5.73e-33 | 126 |
| MS.gene97490.t1 | AT1G73830 | 68.132 | 91 | 24 | 1 | 363 | 448 | 146 | 236 | 8.81e-33 | 126 |
| MS.gene97490.t1 | AT1G18400 | 71.084 | 83 | 24 | 0 | 362 | 444 | 143 | 225 | 9.54e-33 | 126 |
| MS.gene97490.t1 | AT1G73830 | 71.951 | 82 | 23 | 0 | 363 | 444 | 146 | 227 | 1.71e-32 | 125 |
| MS.gene97490.t1 | AT1G25330 | 44.586 | 157 | 65 | 2 | 329 | 463 | 67 | 223 | 1.38e-31 | 122 |
| MS.gene97490.t1 | AT3G57800 | 48.201 | 139 | 25 | 1 | 358 | 449 | 198 | 336 | 4.06e-31 | 125 |
| MS.gene97490.t1 | AT5G58010 | 58.065 | 93 | 34 | 2 | 351 | 439 | 86 | 177 | 4.26e-22 | 97.4 |
| MS.gene97490.t1 | AT2G24260 | 64.384 | 73 | 25 | 1 | 357 | 429 | 28 | 99 | 5.99e-22 | 95.5 |
| MS.gene97490.t1 | AT4G30980 | 56.122 | 98 | 37 | 2 | 332 | 429 | 103 | 194 | 1.75e-21 | 95.9 |
| MS.gene97490.t1 | AT2G24260 | 64.384 | 73 | 25 | 1 | 357 | 429 | 131 | 202 | 3.73e-21 | 95.5 |
| MS.gene97490.t1 | AT4G30980 | 56.122 | 98 | 37 | 2 | 332 | 429 | 151 | 242 | 3.98e-21 | 95.5 |
| MS.gene97490.t1 | AT2G42300 | 78.261 | 46 | 10 | 0 | 358 | 403 | 179 | 224 | 3.81e-17 | 81.3 |
| MS.gene97490.t1 | AT2G42300 | 78.261 | 46 | 10 | 0 | 358 | 403 | 179 | 224 | 3.81e-17 | 81.3 |
| MS.gene97490.t1 | AT2G42300 | 78.261 | 46 | 10 | 0 | 358 | 403 | 179 | 224 | 4.88e-17 | 81.3 |
| MS.gene97490.t1 | AT4G09180 | 53.731 | 67 | 31 | 0 | 362 | 428 | 182 | 248 | 1.04e-14 | 74.7 |
| MS.gene97490.t1 | AT2G42280 | 54.688 | 64 | 29 | 0 | 364 | 427 | 279 | 342 | 1.55e-14 | 75.9 |
| MS.gene97490.t1 | AT2G42280 | 56.061 | 66 | 27 | 1 | 364 | 427 | 279 | 344 | 3.15e-14 | 74.7 |
| MS.gene97490.t1 | AT2G20180 | 35.965 | 114 | 61 | 3 | 318 | 429 | 239 | 342 | 4.46e-14 | 75.1 |
| MS.gene97490.t1 | AT2G20180 | 35.965 | 114 | 61 | 3 | 318 | 429 | 239 | 342 | 4.46e-14 | 75.1 |
| MS.gene97490.t1 | AT2G20180 | 35.965 | 114 | 61 | 3 | 318 | 429 | 239 | 342 | 4.46e-14 | 75.1 |
| MS.gene97490.t1 | AT2G20180 | 35.965 | 114 | 61 | 3 | 318 | 429 | 239 | 342 | 4.46e-14 | 75.1 |
| MS.gene97490.t1 | AT2G20180 | 35.965 | 114 | 61 | 3 | 318 | 429 | 168 | 271 | 4.56e-14 | 74.7 |
| MS.gene97490.t1 | AT2G20180 | 35.965 | 114 | 61 | 3 | 318 | 429 | 168 | 271 | 4.56e-14 | 74.7 |
| MS.gene97490.t1 | AT2G20180 | 35.965 | 114 | 61 | 3 | 318 | 429 | 168 | 271 | 4.56e-14 | 74.7 |
| MS.gene97490.t1 | AT1G35460 | 53.846 | 65 | 30 | 0 | 364 | 428 | 181 | 245 | 4.90e-14 | 72.8 |
| MS.gene97490.t1 | AT4G28790 | 33.775 | 151 | 77 | 5 | 366 | 513 | 273 | 403 | 1.45e-13 | 73.2 |
| MS.gene97490.t1 | AT1G09530 | 51.562 | 64 | 30 | 1 | 366 | 429 | 339 | 401 | 1.70e-13 | 73.6 |
| MS.gene97490.t1 | AT1G09530 | 51.562 | 64 | 30 | 1 | 366 | 429 | 339 | 401 | 1.70e-13 | 73.6 |
| MS.gene97490.t1 | AT1G09530 | 51.562 | 64 | 30 | 1 | 366 | 429 | 339 | 401 | 1.70e-13 | 73.6 |
| MS.gene97490.t1 | AT1G09530 | 51.562 | 64 | 30 | 1 | 366 | 429 | 339 | 401 | 1.70e-13 | 73.6 |
| MS.gene97490.t1 | AT1G09530 | 51.562 | 64 | 30 | 1 | 366 | 429 | 339 | 401 | 1.70e-13 | 73.6 |
| MS.gene97490.t1 | AT1G09530 | 51.562 | 64 | 30 | 1 | 366 | 429 | 339 | 401 | 1.70e-13 | 73.6 |
| MS.gene97490.t1 | AT1G51140 | 54.688 | 64 | 29 | 0 | 364 | 427 | 304 | 367 | 2.87e-13 | 72.0 |
| MS.gene97490.t1 | AT2G20180 | 35.455 | 110 | 61 | 3 | 318 | 426 | 239 | 339 | 3.92e-13 | 71.2 |
| MS.gene97490.t1 | AT4G02590 | 62.121 | 66 | 24 | 1 | 364 | 429 | 83 | 147 | 8.80e-13 | 68.9 |
| MS.gene97490.t1 | AT4G28815 | 55.172 | 58 | 25 | 1 | 367 | 424 | 71 | 127 | 9.16e-13 | 68.6 |
| MS.gene97490.t1 | AT1G03040 | 62.121 | 66 | 24 | 1 | 364 | 429 | 139 | 203 | 1.14e-12 | 69.3 |
| MS.gene97490.t1 | AT4G02590 | 62.121 | 66 | 24 | 1 | 364 | 429 | 146 | 210 | 1.17e-12 | 69.3 |
| MS.gene97490.t1 | AT4G02590 | 62.121 | 66 | 24 | 1 | 364 | 429 | 146 | 210 | 1.17e-12 | 69.3 |
| MS.gene97490.t1 | AT1G03040 | 62.121 | 66 | 24 | 1 | 364 | 429 | 144 | 208 | 1.43e-12 | 68.9 |
| MS.gene97490.t1 | AT4G00050 | 52.308 | 65 | 30 | 1 | 364 | 428 | 105 | 168 | 2.45e-12 | 68.2 |
| MS.gene97490.t1 | AT4G28815 | 55.172 | 58 | 25 | 1 | 367 | 424 | 147 | 203 | 2.63e-12 | 68.6 |
| MS.gene97490.t1 | AT1G03040 | 62.121 | 66 | 24 | 1 | 364 | 429 | 144 | 208 | 2.69e-12 | 68.6 |
| MS.gene97490.t1 | AT4G28800 | 45.205 | 73 | 39 | 1 | 367 | 439 | 252 | 323 | 3.31e-12 | 69.3 |
| MS.gene97490.t1 | AT4G00050 | 52.308 | 65 | 30 | 1 | 364 | 428 | 207 | 270 | 5.36e-12 | 68.2 |
| MS.gene97490.t1 | AT4G00050 | 52.308 | 65 | 30 | 1 | 364 | 428 | 207 | 270 | 5.96e-12 | 68.2 |
| MS.gene97490.t1 | AT1G27740 | 43.434 | 99 | 48 | 3 | 337 | 428 | 133 | 230 | 1.43e-11 | 65.5 |
| MS.gene97490.t1 | AT4G28790 | 46.970 | 66 | 34 | 1 | 366 | 431 | 273 | 337 | 1.75e-11 | 66.2 |
| MS.gene97490.t1 | AT4G33880 | 45.000 | 80 | 41 | 2 | 351 | 428 | 251 | 329 | 2.86e-11 | 65.9 |
| MS.gene97490.t1 | AT2G43140 | 51.562 | 64 | 31 | 0 | 364 | 427 | 231 | 294 | 2.88e-11 | 65.1 |
| MS.gene97490.t1 | AT4G28800 | 52.542 | 59 | 27 | 1 | 367 | 425 | 264 | 321 | 3.13e-11 | 66.2 |
| MS.gene97490.t1 | AT2G43140 | 51.562 | 64 | 31 | 0 | 364 | 427 | 134 | 197 | 4.54e-11 | 63.2 |
Find 170 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCAGTTTCCTACTGATTC+TGG | 0.189881 | 5.3:-37292815 | MS.gene97490:CDS |
| CTTCAAATACAATTGGAATT+AGG | 0.207807 | 5.3:-37292970 | MS.gene97490:CDS |
| AGTGATGTAGTGAACGCTTA+TGG | 0.252653 | 5.3:-37292743 | MS.gene97490:CDS |
| ACTCATTTACTCCTAACTTT+TGG | 0.254020 | 5.3:-37293045 | MS.gene97490:CDS |
| ACAACCAAGTTCGACAATTA+AGG | 0.286757 | 5.3:-37292151 | MS.gene97490:CDS |
| TCTGTTGGGTTGGTTTCAAT+TGG | 0.290470 | 5.3:-37293136 | MS.gene97490:CDS |
| AGTTCGACAATTAAGGCTTC+TGG | 0.298196 | 5.3:-37292144 | MS.gene97490:CDS |
| GATCATGGAACACTTGAAAT+TGG | 0.303398 | 5.3:-37292914 | MS.gene97490:CDS |
| TCACCCTTCTGTTGGTTCTC+AGG | 0.306928 | 5.3:+37292177 | None:intergenic |
| CAATGGATCAATACCTGATT+TGG | 0.309027 | 5.3:+37290965 | None:intergenic |
| GCTGCGAGGTTCTCGTGTTT+TGG | 0.317332 | 5.3:-37292779 | MS.gene97490:CDS |
| CACCCTTCTGTTGGTTCTCA+GGG | 0.326528 | 5.3:+37292178 | None:intergenic |
| TTCTGGGAAGAATGCCAAAC+AGG | 0.341010 | 5.3:-37292127 | MS.gene97490:CDS |
| GAGTTTAGTCCTTTCATAGA+AGG | 0.345035 | 5.3:+37292371 | None:intergenic |
| AGGAAAGATGGGTTTGGCTT+TGG | 0.352939 | 5.3:-37292950 | MS.gene97490:CDS |
| ATGCCACCTGATTGGAGATT+TGG | 0.358034 | 5.3:-37293169 | MS.gene97490:CDS |
| GGAACTAGGGATGCTCTTGC+AGG | 0.361664 | 5.3:-37292680 | MS.gene97490:CDS |
| ATTTACTGTTGCAAGTTTCA+TGG | 0.362132 | 5.3:+37291320 | None:intergenic |
| TCGGACGGGTTTGCCATGTT+TGG | 0.369494 | 5.3:+37291046 | None:intergenic |
| GGGAGTTCTTCAAATACAAT+TGG | 0.377973 | 5.3:-37292977 | MS.gene97490:CDS |
| CTGTTGGGTTGGTTTCAATT+GGG | 0.381869 | 5.3:-37293135 | MS.gene97490:CDS |
| ACAATTGGAATTAGGAAAGA+TGG | 0.383879 | 5.3:-37292962 | MS.gene97490:CDS |
| ACATGTATGTATTCCTCCTT+AGG | 0.389054 | 5.3:+37292084 | None:intergenic |
| TAGTAGTACCTTCCAACATT+GGG | 0.407959 | 5.3:+37292402 | None:intergenic |
| ATGTATGCCGGTTCAATTCA+TGG | 0.409773 | 5.3:-37292701 | MS.gene97490:CDS |
| TTTCTTCAAGAACTTGTGCC+TGG | 0.416423 | 5.3:-37291899 | MS.gene97490:CDS |
| TGATTCCGACAGAGGTGAAT+CGG | 0.417204 | 5.3:-37292462 | MS.gene97490:CDS |
| GAAGCCTTAATTGTCGAACT+TGG | 0.420693 | 5.3:+37292147 | None:intergenic |
| GAATGATAAAAGCGAGGGTC+GGG | 0.422825 | 5.3:-37292531 | MS.gene97490:CDS |
| TGTAGTTCTTGAGCTCTACT+AGG | 0.427644 | 5.3:+37292222 | None:intergenic |
| GTGATGTAGTGAACGCTTAT+GGG | 0.431577 | 5.3:-37292742 | MS.gene97490:CDS |
| GGAATTAGGAAAGATGGGTT+TGG | 0.432682 | 5.3:-37292956 | MS.gene97490:CDS |
| ATGGAACACTTGAAATTGGT+TGG | 0.432972 | 5.3:-37292910 | MS.gene97490:CDS |
| AGCTCGTCCGCCCACACATC+AGG | 0.433940 | 5.3:+37290697 | None:intergenic |
| TTCGTCGAATTCACAAAACT+TGG | 0.438619 | 5.3:-37293017 | MS.gene97490:CDS |
| CGGGCCGGGTCTCAAGATGA+AGG | 0.439323 | 5.3:-37292512 | MS.gene97490:CDS |
| GATGGGTTTGGCTTTGGAAG+AGG | 0.440982 | 5.3:-37292944 | MS.gene97490:CDS |
| GTTCGACAATTAAGGCTTCT+GGG | 0.445541 | 5.3:-37292143 | MS.gene97490:CDS |
| GTCACCATCTGTTGAGCAAT+TGG | 0.446286 | 5.3:-37292576 | MS.gene97490:CDS |
| TAATTGTCGAACTTGGTTGT+TGG | 0.452756 | 5.3:+37292154 | None:intergenic |
| CAATTGGAATTAGGAAAGAT+GGG | 0.455462 | 5.3:-37292961 | MS.gene97490:CDS |
| CACTGGTAAGGCAGTGATGC+TGG | 0.456491 | 5.3:-37291764 | MS.gene97490:CDS |
| GCTCAAGAACTACAAATTGA+AGG | 0.456974 | 5.3:-37292213 | MS.gene97490:CDS |
| GTCATGTTCATCTGCCTCAA+TGG | 0.457257 | 5.3:-37293071 | MS.gene97490:CDS |
| ACCGTTGAGTGGAGGATTCA+AGG | 0.457519 | 5.3:-37290990 | MS.gene97490:CDS |
| GTAGCTGCTTCAACCACATT+CGG | 0.459711 | 5.3:+37292608 | None:intergenic |
| CCGGTTCAATTCATGGAACT+AGG | 0.462018 | 5.3:-37292694 | MS.gene97490:CDS |
| AATAGTTCTTCGAAGGATAT+CGG | 0.462281 | 5.3:+37291027 | None:intergenic |
| TGCAAATTCATCTGTTGGGT+TGG | 0.463783 | 5.3:-37293146 | MS.gene97490:CDS |
| GTTGTTGGTCACCCTTCTGT+TGG | 0.463868 | 5.3:+37292169 | None:intergenic |
| AGGAGGAATACATACATGTC+AGG | 0.465382 | 5.3:-37292080 | MS.gene97490:CDS |
| GACGAATGGTCCCAAAAGTT+AGG | 0.467097 | 5.3:+37293034 | None:intergenic |
| CTTTCATCATAGCATTAGCC+TGG | 0.468303 | 5.3:+37292885 | None:intergenic |
| GGAAGAGGTGGTCATGATCA+TGG | 0.471227 | 5.3:-37292929 | MS.gene97490:CDS |
| TTACCCTCTCTGCAAGGCTA+TGG | 0.472298 | 5.3:+37292031 | None:intergenic |
| CACAGTTCTTGCAGCTGCAA+TGG | 0.473460 | 5.3:+37290948 | None:intergenic |
| CAGCCATAGCCTTGCAGAGA+GGG | 0.475539 | 5.3:-37292034 | MS.gene97490:intron |
| CATACATGTCAGGGCTCGCC+GGG | 0.476438 | 5.3:-37292070 | MS.gene97490:CDS |
| AGGCTAATGCTATGATGAAA+GGG | 0.479565 | 5.3:-37292883 | MS.gene97490:CDS |
| CCTAGTTCCATGAATTGAAC+CGG | 0.480473 | 5.3:+37292694 | None:intergenic |
| AGGATTCAAGGAGCCAAATC+AGG | 0.482445 | 5.3:-37290978 | MS.gene97490:CDS |
| TTTGCACCAAATCTCCAATC+AGG | 0.483200 | 5.3:+37293163 | None:intergenic |
| CTTCCCTTCATCTTGAGACC+CGG | 0.484549 | 5.3:+37292508 | None:intergenic |
| TTTGGTGCAAATTCATCTGT+TGG | 0.488720 | 5.3:-37293151 | MS.gene97490:CDS |
| ATGTTTGCAGGTCACTGGTA+AGG | 0.491200 | 5.3:-37291776 | MS.gene97490:intron |
| GATAAAAGCGAGGGTCGGGC+CGG | 0.496645 | 5.3:-37292527 | MS.gene97490:CDS |
| AAGGACTAAACTCGAAGAAA+AGG | 0.496988 | 5.3:-37292361 | MS.gene97490:CDS |
| CAATCCATGGCGATGTATGC+CGG | 0.498492 | 5.3:-37292713 | MS.gene97490:CDS |
| AAAGAAAAGTTTGAGGTGGA+TGG | 0.498732 | 5.3:-37293226 | MS.gene97490:CDS |
| GATTCCGACAGAGGTGAATC+GGG | 0.499637 | 5.3:-37292461 | MS.gene97490:CDS |
| AACTTACATCTTTAGCAAGA+AGG | 0.504065 | 5.3:+37291271 | None:intergenic |
| TTGGTGCAAATTCATCTGTT+GGG | 0.505316 | 5.3:-37293150 | MS.gene97490:CDS |
| AGGGATGCTCTTGCAGGCGT+TGG | 0.507541 | 5.3:-37292674 | MS.gene97490:CDS |
| ACATACATGTCAGGGCTCGC+CGG | 0.509883 | 5.3:-37292071 | MS.gene97490:CDS |
| CAGATTCTTCACCAACGGCC+TGG | 0.510859 | 5.3:-37291160 | MS.gene97490:CDS |
| ATACCACTAGAATAACTCAT+AGG | 0.511749 | 5.3:+37293190 | None:intergenic |
| CTAGTGGTATGCCACCTGAT+TGG | 0.512379 | 5.3:-37293177 | MS.gene97490:CDS |
| ACAAGATGGTTCCCCAATGT+TGG | 0.518258 | 5.3:-37292414 | MS.gene97490:CDS |
| AAAGTCACCTTGCTGCATCC+AGG | 0.518784 | 5.3:+37291881 | None:intergenic |
| ATTCTATGAGTATGAATAGA+GGG | 0.526004 | 5.3:-37293111 | MS.gene97490:CDS |
| GTGGTTGAAGCAGCTACAAA+AGG | 0.527400 | 5.3:-37292602 | MS.gene97490:CDS |
| TGTTGATGTTTGCAGGTCAC+TGG | 0.529088 | 5.3:-37291781 | MS.gene97490:intron |
| GAAAAGGAAAAGAAGTGGAC+AGG | 0.529299 | 5.3:-37292345 | MS.gene97490:intron |
| AATTCTATGAGTATGAATAG+AGG | 0.529332 | 5.3:-37293112 | MS.gene97490:CDS |
| TGCTTTAGATGCCTGATGTG+TGG | 0.531312 | 5.3:-37290708 | MS.gene97490:intron |
| GCATACATCGCCATGGATTG+AGG | 0.532580 | 5.3:+37292716 | None:intergenic |
| GGGTTTGGCTTTGGAAGAGG+TGG | 0.532994 | 5.3:-37292941 | MS.gene97490:CDS |
| CAGGCTAATGCTATGATGAA+AGG | 0.533203 | 5.3:-37292884 | MS.gene97490:CDS |
| CCTAGTGTGGATGAAGGACC+AGG | 0.537537 | 5.3:+37291142 | None:intergenic |
| CTAGTAGTACCTTCCAACAT+TGG | 0.537550 | 5.3:+37292401 | None:intergenic |
| CCTGGTTGAGATGGATGTAA+TGG | 0.538930 | 5.3:+37291088 | None:intergenic |
| GGCTGTTTGTTGCTTGACCC+CGG | 0.540075 | 5.3:+37292052 | None:intergenic |
| GGTGACGATGATGGTGGTCG+TGG | 0.540368 | 5.3:-37292440 | MS.gene97490:CDS |
| TGAATCATCCCTGGTTGAGA+TGG | 0.540521 | 5.3:+37291079 | None:intergenic |
| GGATCATCACTCTCTTGTGT+TGG | 0.542048 | 5.3:+37292629 | None:intergenic |
| ATAAAAGCGAGGGTCGGGCC+GGG | 0.545728 | 5.3:-37292526 | MS.gene97490:CDS |
| TGCAACAGTAAATCCACGGC+TGG | 0.549394 | 5.3:-37291310 | MS.gene97490:CDS |
| TCAAAATTCTGATCCACCTA+AGG | 0.553749 | 5.3:-37292100 | MS.gene97490:CDS |
| CCATTACATCCATCTCAACC+AGG | 0.557186 | 5.3:-37291088 | MS.gene97490:CDS |
| CCTGGTCCTTCATCCACACT+AGG | 0.558930 | 5.3:-37291142 | MS.gene97490:CDS |
| GTTGGACTTCGAGTAGCAAA+TGG | 0.559598 | 5.3:-37292656 | MS.gene97490:CDS |
| CGGTTCAATTCATGGAACTA+GGG | 0.563315 | 5.3:-37292693 | MS.gene97490:CDS |
| TCGTCGAATTCACAAAACTT+GGG | 0.563821 | 5.3:-37293016 | MS.gene97490:CDS |
| GGTGGTCGTGGCGGACAAGA+TGG | 0.564269 | 5.3:-37292428 | MS.gene97490:CDS |
| AACAAAGACAAATTGTGCGA+AGG | 0.565105 | 5.3:+37290921 | None:intergenic |
| GAGTGACAAAGAAAAGTTTG+AGG | 0.565967 | 5.3:-37293233 | MS.gene97490:CDS |
| GTTTGAGGTGGATGGAAATG+AGG | 0.566256 | 5.3:-37293218 | MS.gene97490:CDS |
| ACTTGAAATTGGTTGGAACC+AGG | 0.567324 | 5.3:-37292903 | MS.gene97490:CDS |
| AGTGGAGAGCCTTCTATGAA+AGG | 0.567968 | 5.3:-37292380 | MS.gene97490:CDS |
| ATGTTCATCTGCCTCAATGG+TGG | 0.569853 | 5.3:-37293068 | MS.gene97490:CDS |
| TCCTTGAATCCTCCACTCAA+CGG | 0.571453 | 5.3:+37290989 | None:intergenic |
| GCTTTAGATGCCTGATGTGT+GGG | 0.574539 | 5.3:-37290707 | MS.gene97490:intron |
| TCAATCAGTGATTCCAAACA+TGG | 0.574687 | 5.3:-37291059 | MS.gene97490:CDS |
| TCGATAAAACCAGAATCAGT+AGG | 0.575351 | 5.3:+37292806 | None:intergenic |
| TTATGGGGTTCCTCAATCCA+TGG | 0.575365 | 5.3:-37292726 | MS.gene97490:CDS |
| TTCTTCGAAGGATATCGGAC+GGG | 0.577452 | 5.3:+37291032 | None:intergenic |
| GGAAATCCTAGTGTGGATGA+AGG | 0.585198 | 5.3:+37291136 | None:intergenic |
| ATGTTGGAAGGTACTACTAG+TGG | 0.587812 | 5.3:-37292398 | MS.gene97490:CDS |
| GGTGAATCGGGTGACGATGA+TGG | 0.589027 | 5.3:-37292449 | MS.gene97490:CDS |
| TCGAAGAAAAGGAAAAGAAG+TGG | 0.595035 | 5.3:-37292350 | MS.gene97490:CDS |
| ATCACTGATTGAATCATCCC+TGG | 0.597295 | 5.3:+37291070 | None:intergenic |
| GATGGTTCCCCAATGTTGGA+AGG | 0.604783 | 5.3:-37292410 | MS.gene97490:CDS |
| TGAGGTGGATGGAAATGAGG+AGG | 0.606986 | 5.3:-37293215 | MS.gene97490:CDS |
| GTGTATGAATAGTTCTTCGA+AGG | 0.607675 | 5.3:+37291020 | None:intergenic |
| GGAGGAATACATACATGTCA+GGG | 0.608924 | 5.3:-37292079 | MS.gene97490:CDS |
| ACTACAAATTGAAGGTGCAA+AGG | 0.610606 | 5.3:-37292205 | MS.gene97490:CDS |
| TCTGGGAAGAATGCCAAACA+GGG | 0.611782 | 5.3:-37292126 | MS.gene97490:CDS |
| AAATTCTGATCCACCTAAGG+AGG | 0.612050 | 5.3:-37292097 | MS.gene97490:CDS |
| GTAGCCAATTGCTCAACAGA+TGG | 0.612683 | 5.3:+37292572 | None:intergenic |
| TGTATGTATTCCTCCTTAGG+TGG | 0.613419 | 5.3:+37292087 | None:intergenic |
| AGAATGATAAAAGCGAGGGT+CGG | 0.617597 | 5.3:-37292532 | MS.gene97490:CDS |
| ACTGTCAGATTCTTCACCAA+CGG | 0.618604 | 5.3:-37291165 | MS.gene97490:intron |
| TTTGAAGAATGATAAAAGCG+AGG | 0.619913 | 5.3:-37292537 | MS.gene97490:CDS |
| GTTCTTCGAAGGATATCGGA+CGG | 0.621658 | 5.3:+37291031 | None:intergenic |
| GTCACTTCAACGACAAGTTG+AGG | 0.622054 | 5.3:-37291719 | MS.gene97490:intron |
| GACGATGATGGTGGTCGTGG+CGG | 0.622075 | 5.3:-37292437 | MS.gene97490:CDS |
| ACACAGTTAACACCGTTGAG+TGG | 0.622575 | 5.3:-37291001 | MS.gene97490:CDS |
| GGCTAATGCTATGATGAAAG+GGG | 0.622867 | 5.3:-37292882 | MS.gene97490:CDS |
| AATGTTAATGATTCCGACAG+AGG | 0.622946 | 5.3:-37292470 | MS.gene97490:CDS |
| CAACCCTGAGAACCAACAGA+AGG | 0.624229 | 5.3:-37292181 | MS.gene97490:CDS |
| TGATGTAGTGAACGCTTATG+GGG | 0.624550 | 5.3:-37292741 | MS.gene97490:CDS |
| AGTAAATGAGTCCACCATTG+AGG | 0.626203 | 5.3:+37293057 | None:intergenic |
| TTGAAGAATGATAAAAGCGA+GGG | 0.626379 | 5.3:-37292536 | MS.gene97490:CDS |
| TTCTATGAGTATGAATAGAG+GGG | 0.627112 | 5.3:-37293110 | MS.gene97490:CDS |
| CAGTTAACACCGTTGAGTGG+AGG | 0.628541 | 5.3:-37290998 | MS.gene97490:CDS |
| AAATTCATTGACATCTCTAG+AGG | 0.629470 | 5.3:+37291115 | None:intergenic |
| GTCACCCGATTCACCTCTGT+CGG | 0.629653 | 5.3:+37292457 | None:intergenic |
| AACTTGCAACAGTAAATCCA+CGG | 0.632130 | 5.3:-37291314 | MS.gene97490:CDS |
| CTCTAGAGGAAATCCTAGTG+TGG | 0.634071 | 5.3:+37291129 | None:intergenic |
| AATGCTATGATGAAAGGGGA+TGG | 0.640341 | 5.3:-37292878 | MS.gene97490:CDS |
| TGAACCGGCATACATCGCCA+TGG | 0.640711 | 5.3:+37292709 | None:intergenic |
| AACCCTGAGAACCAACAGAA+GGG | 0.641900 | 5.3:-37292180 | MS.gene97490:CDS |
| TGTATCTTACCCTCTCTGCA+AGG | 0.649854 | 5.3:+37292025 | None:intergenic |
| TGACAAAGAAAAGTTTGAGG+TGG | 0.652348 | 5.3:-37293230 | MS.gene97490:CDS |
| GGGCCGGGTCTCAAGATGAA+GGG | 0.654605 | 5.3:-37292511 | MS.gene97490:CDS |
| TGGATGAAGGACCAGGCCGT+TGG | 0.658029 | 5.3:+37291149 | None:intergenic |
| GCACCAAATCTCCAATCAGG+TGG | 0.660162 | 5.3:+37293166 | None:intergenic |
| AGTAGTACCTTCCAACATTG+GGG | 0.673147 | 5.3:+37292403 | None:intergenic |
| GATCCTATGAGTTATTCTAG+TGG | 0.678062 | 5.3:-37293193 | MS.gene97490:CDS |
| TTAGATGCCTGATGTGTGGG+CGG | 0.683943 | 5.3:-37290704 | MS.gene97490:intron |
| CATTACATCCATCTCAACCA+GGG | 0.684099 | 5.3:-37291087 | MS.gene97490:CDS |
| GGTTGAGATGGATGTAATGG+AGG | 0.685510 | 5.3:+37291091 | None:intergenic |
| TCAATATTGAAATCCAGCCG+TGG | 0.686618 | 5.3:+37291297 | None:intergenic |
| GGACTTCGAGTAGCAAATGG+AGG | 0.689394 | 5.3:-37292653 | MS.gene97490:CDS |
| AGAGAGTGATGATCCGAATG+TGG | 0.704038 | 5.3:-37292621 | MS.gene97490:CDS |
| GGAAACTGAGATAAACTCTG+AGG | 0.706311 | 5.3:+37292827 | None:intergenic |
| ACTTGTGCCTGGATGCAGCA+AGG | 0.709020 | 5.3:-37291888 | MS.gene97490:intron |
| GAATCGGGTGACGATGATGG+TGG | 0.722378 | 5.3:-37292446 | MS.gene97490:CDS |
| ATACATGTCAGGGCTCGCCG+GGG | 0.730260 | 5.3:-37292069 | MS.gene97490:CDS |
| ACAGCCATAGCCTTGCAGAG+AGG | 0.735764 | 5.3:-37292035 | MS.gene97490:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTGGATAAAAATTTTAAAC+TGG | - | chr5.3:37291944-37291963 | MS.gene97490:intron | 15.0% |
| !! | AACATGAATAAATATGCAAA+GGG | + | chr5.3:37292530-37292549 | None:intergenic | 20.0% |
| !! | AATAAAAAACCACAGATTTA+TGG | - | chr5.3:37293060-37293079 | MS.gene97490:CDS | 20.0% |
| !! | TAAATTATGTCTTGTGTAAA+TGG | - | chr5.3:37291914-37291933 | MS.gene97490:CDS | 20.0% |
| !! | TAACATGAATAAATATGCAA+AGG | + | chr5.3:37292531-37292550 | None:intergenic | 20.0% |
| !! | TGTGTAAATGGAAAATAATT+TGG | - | chr5.3:37291926-37291945 | MS.gene97490:CDS | 20.0% |
| !!! | TAAGCATTTTTTTTTCTAAC+CGG | + | chr5.3:37292684-37292703 | None:intergenic | 20.0% |
| ! | AAGTAGAACTAAAACATACA+GGG | + | chr5.3:37292288-37292307 | None:intergenic | 25.0% |
| ! | AATTCTATGAGTATGAATAG+AGG | - | chr5.3:37290800-37290819 | MS.gene97490:intron | 25.0% |
| ! | ATTCTATGAGTATGAATAGA+GGG | - | chr5.3:37290801-37290820 | MS.gene97490:intron | 25.0% |
| ! | CACGATTAACATTCAAAATT+AGG | + | chr5.3:37292397-37292416 | None:intergenic | 25.0% |
| ! | CTTCAAATACAATTGGAATT+AGG | - | chr5.3:37290942-37290961 | MS.gene97490:CDS | 25.0% |
| ! | TAAATCATACTGAATTTCTC+TGG | + | chr5.3:37292067-37292086 | None:intergenic | 25.0% |
| ! | TTAAGTACATGTTAAAGTGT+TGG | + | chr5.3:37292369-37292388 | None:intergenic | 25.0% |
| !! | AACATGTAAAAGAAAGTACA+TGG | + | chr5.3:37293137-37293156 | None:intergenic | 25.0% |
| !! | GTACTTTCTTTTACATGTTT+CGG | - | chr5.3:37293138-37293157 | MS.gene97490:CDS | 25.0% |
| !!! | ATTAATTTGTTGATGTTTGC+AGG | - | chr5.3:37292124-37292143 | MS.gene97490:CDS | 25.0% |
| !!! | TTTGAGCTTTATTTTGTTGT+GGG | - | chr5.3:37291604-37291623 | MS.gene97490:intron | 25.0% |
| !!! | TTTTGAGCTTTATTTTGTTG+TGG | - | chr5.3:37291603-37291622 | MS.gene97490:intron | 25.0% |
| AAAGAAGAACGATCAAACAA+AGG | + | chr5.3:37292099-37292118 | None:intergenic | 30.0% | |
| AAATATGACAGTGATCGTAT+AGG | + | chr5.3:37292424-37292443 | None:intergenic | 30.0% | |
| AAATTCATTGACATCTCTAG+AGG | + | chr5.3:37292800-37292819 | None:intergenic | 30.0% | |
| AACTTACATCTTTAGCAAGA+AGG | + | chr5.3:37292644-37292663 | None:intergenic | 30.0% | |
| AATAGTTCTTCGAAGGATAT+CGG | + | chr5.3:37292888-37292907 | None:intergenic | 30.0% | |
| ACAATTGGAATTAGGAAAGA+TGG | - | chr5.3:37290950-37290969 | MS.gene97490:CDS | 30.0% | |
| ATACCACTAGAATAACTCAT+AGG | + | chr5.3:37290725-37290744 | None:intergenic | 30.0% | |
| ATTTACTGTTGCAAGTTTCA+TGG | + | chr5.3:37292595-37292614 | None:intergenic | 30.0% | |
| CAATTGGAATTAGGAAAGAT+GGG | - | chr5.3:37290951-37290970 | MS.gene97490:CDS | 30.0% | |
| GAAGTAGAACTAAAACATAC+AGG | + | chr5.3:37292289-37292308 | None:intergenic | 30.0% | |
| TTAGACAGATTAAGAATCTC+TGG | + | chr5.3:37292257-37292276 | None:intergenic | 30.0% | |
| TTCTATGAGTATGAATAGAG+GGG | - | chr5.3:37290802-37290821 | MS.gene97490:intron | 30.0% | |
| TTGAAGAATGATAAAAGCGA+GGG | - | chr5.3:37291376-37291395 | MS.gene97490:intron | 30.0% | |
| TTGTTAATCCAATTGCATAC+CGG | - | chr5.3:37292662-37292681 | MS.gene97490:CDS | 30.0% | |
| TTTGAAGAATGATAAAAGCG+AGG | - | chr5.3:37291375-37291394 | MS.gene97490:intron | 30.0% | |
| ! | ACTCATTTACTCCTAACTTT+TGG | - | chr5.3:37290867-37290886 | MS.gene97490:intron | 30.0% |
| ! | ATGAATAGAGGGGATTTTAT+TGG | - | chr5.3:37290812-37290831 | MS.gene97490:intron | 30.0% |
| ! | CTCATTTACTCCTAACTTTT+GGG | - | chr5.3:37290868-37290887 | MS.gene97490:intron | 30.0% |
| ! | TGGGATTTTGTGACATTAAT+GGG | - | chr5.3:37290915-37290934 | MS.gene97490:CDS | 30.0% |
| ! | TTGGGATTTTGTGACATTAA+TGG | - | chr5.3:37290914-37290933 | MS.gene97490:CDS | 30.0% |
| !! | TCGCTTTTATCATTCTTCAA+AGG | + | chr5.3:37291376-37291395 | None:intergenic | 30.0% |
| !!! | TGATTCTGGTTTTATCGAAA+GGG | - | chr5.3:37291111-37291130 | MS.gene97490:CDS | 30.0% |
| AACAAAGACAAATTGTGCGA+AGG | + | chr5.3:37292994-37293013 | None:intergenic | 35.0% | |
| AACTTGCAACAGTAAATCCA+CGG | - | chr5.3:37292598-37292617 | MS.gene97490:CDS | 35.0% | |
| AAGGACTAAACTCGAAGAAA+AGG | - | chr5.3:37291551-37291570 | MS.gene97490:intron | 35.0% | |
| AATGTTAATGATTCCGACAG+AGG | - | chr5.3:37291442-37291461 | MS.gene97490:intron | 35.0% | |
| ACAACCAAGTTCGACAATTA+AGG | - | chr5.3:37291761-37291780 | MS.gene97490:CDS | 35.0% | |
| ACAGATTAAGAATCTCTGGT+GGG | + | chr5.3:37292253-37292272 | None:intergenic | 35.0% | |
| ACATGTATGTATTCCTCCTT+AGG | + | chr5.3:37291831-37291850 | None:intergenic | 35.0% | |
| AGGCTAATGCTATGATGAAA+GGG | - | chr5.3:37291029-37291048 | MS.gene97490:CDS | 35.0% | |
| ATGATGCATCCATAAATCTG+TGG | + | chr5.3:37293072-37293091 | None:intergenic | 35.0% | |
| ATGGAACACTTGAAATTGGT+TGG | - | chr5.3:37291002-37291021 | MS.gene97490:CDS | 35.0% | |
| CAAGTTTCATGGACAAAAAC+TGG | + | chr5.3:37292584-37292603 | None:intergenic | 35.0% | |
| CAATGGATCAATACCTGATT+TGG | + | chr5.3:37292950-37292969 | None:intergenic | 35.0% | |
| GAGTGACAAAGAAAAGTTTG+AGG | - | chr5.3:37290679-37290698 | MS.gene97490:CDS | 35.0% | |
| GAGTTTAGTCCTTTCATAGA+AGG | + | chr5.3:37291544-37291563 | None:intergenic | 35.0% | |
| GATCATGGAACACTTGAAAT+TGG | - | chr5.3:37290998-37291017 | MS.gene97490:CDS | 35.0% | |
| GATCCTATGAGTTATTCTAG+TGG | - | chr5.3:37290719-37290738 | MS.gene97490:intron | 35.0% | |
| GCTCAAGAACTACAAATTGA+AGG | - | chr5.3:37291699-37291718 | MS.gene97490:intron | 35.0% | |
| GGGAGTTCTTCAAATACAAT+TGG | - | chr5.3:37290935-37290954 | MS.gene97490:CDS | 35.0% | |
| GTGGGAAAATACAAAGAGAA+GGG | + | chr5.3:37292235-37292254 | None:intergenic | 35.0% | |
| GTGTATGAATAGTTCTTCGA+AGG | + | chr5.3:37292895-37292914 | None:intergenic | 35.0% | |
| TAATTGTCGAACTTGGTTGT+TGG | + | chr5.3:37291761-37291780 | None:intergenic | 35.0% | |
| TAGTAGTACCTTCCAACATT+GGG | + | chr5.3:37291513-37291532 | None:intergenic | 35.0% | |
| TCAAAATTCTGATCCACCTA+AGG | - | chr5.3:37291812-37291831 | MS.gene97490:intron | 35.0% | |
| TCAATCAGTGATTCCAAACA+TGG | - | chr5.3:37292853-37292872 | MS.gene97490:CDS | 35.0% | |
| TCGAAGAAAAGGAAAAGAAG+TGG | - | chr5.3:37291562-37291581 | MS.gene97490:intron | 35.0% | |
| TCGATAAAACCAGAATCAGT+AGG | + | chr5.3:37291109-37291128 | None:intergenic | 35.0% | |
| TCGTCGAATTCACAAAACTT+GGG | - | chr5.3:37290896-37290915 | MS.gene97490:intron | 35.0% | |
| TGACAAAGAAAAGTTTGAGG+TGG | - | chr5.3:37290682-37290701 | MS.gene97490:CDS | 35.0% | |
| TTCGTCGAATTCACAAAACT+TGG | - | chr5.3:37290895-37290914 | MS.gene97490:intron | 35.0% | |
| TTGGTGCAAATTCATCTGTT+GGG | - | chr5.3:37290762-37290781 | MS.gene97490:intron | 35.0% | |
| ! | AAAGAAAAGTTTGAGGTGGA+TGG | - | chr5.3:37290686-37290705 | MS.gene97490:CDS | 35.0% |
| ! | ACTACAAATTGAAGGTGCAA+AGG | - | chr5.3:37291707-37291726 | MS.gene97490:intron | 35.0% |
| ! | ATTGAGTTTTTCCTTGTGGT+AGG | - | chr5.3:37291650-37291669 | MS.gene97490:intron | 35.0% |
| ! | TGTGATTGAGTTTTTCCTTG+TGG | - | chr5.3:37291646-37291665 | MS.gene97490:intron | 35.0% |
| ! | TTAAACTGGATTTTCACTGC+AGG | - | chr5.3:37291958-37291977 | MS.gene97490:intron | 35.0% |
| ! | TTTGGTGCAAATTCATCTGT+TGG | - | chr5.3:37290761-37290780 | MS.gene97490:intron | 35.0% |
| ! | TTTTCTAACCGGTATGCAAT+TGG | + | chr5.3:37292673-37292692 | None:intergenic | 35.0% |
| !! | AGTTTTGTGAATTCGACGAA+TGG | + | chr5.3:37290895-37290914 | None:intergenic | 35.0% |
| !!! | CTGATTCTGGTTTTATCGAA+AGG | - | chr5.3:37291110-37291129 | MS.gene97490:CDS | 35.0% |
| AAATTCTGATCCACCTAAGG+AGG | - | chr5.3:37291815-37291834 | MS.gene97490:intron | 40.0% | |
| AACTGGCACAAGAGAAAAGA+TGG | + | chr5.3:37292567-37292586 | None:intergenic | 40.0% | |
| AATGCTATGATGAAAGGGGA+TGG | - | chr5.3:37291034-37291053 | MS.gene97490:CDS | 40.0% | |
| ACTGGCACAAGAGAAAAGAT+GGG | + | chr5.3:37292566-37292585 | None:intergenic | 40.0% | |
| ACTGTCAGATTCTTCACCAA+CGG | - | chr5.3:37292747-37292766 | MS.gene97490:CDS | 40.0% | |
| ACTTGAAATTGGTTGGAACC+AGG | - | chr5.3:37291009-37291028 | MS.gene97490:CDS | 40.0% | |
| AGAATGATAAAAGCGAGGGT+CGG | - | chr5.3:37291380-37291399 | MS.gene97490:intron | 40.0% | |
| AGGAGGAATACATACATGTC+AGG | - | chr5.3:37291832-37291851 | MS.gene97490:intron | 40.0% | |
| AGTAAATGAGTCCACCATTG+AGG | + | chr5.3:37290858-37290877 | None:intergenic | 40.0% | |
| AGTAGTACCTTCCAACATTG+GGG | + | chr5.3:37291512-37291531 | None:intergenic | 40.0% | |
| AGTGATGTAGTGAACGCTTA+TGG | - | chr5.3:37291169-37291188 | MS.gene97490:intron | 40.0% | |
| AGTTCGACAATTAAGGCTTC+TGG | - | chr5.3:37291768-37291787 | MS.gene97490:CDS | 40.0% | |
| ATTATCAGCATCCTACCACA+AGG | + | chr5.3:37291664-37291683 | None:intergenic | 40.0% | |
| CAGGCTAATGCTATGATGAA+AGG | - | chr5.3:37291028-37291047 | MS.gene97490:CDS | 40.0% | |
| CATTACATCCATCTCAACCA+GGG | - | chr5.3:37292825-37292844 | MS.gene97490:CDS | 40.0% | |
| CCTAGTTCCATGAATTGAAC+CGG | + | chr5.3:37291221-37291240 | None:intergenic | 40.0% | |
| CGGTTCAATTCATGGAACTA+GGG | - | chr5.3:37291219-37291238 | MS.gene97490:intron | 40.0% | |
| CTAGTAGTACCTTCCAACAT+TGG | + | chr5.3:37291514-37291533 | None:intergenic | 40.0% | |
| CTTTCATCATAGCATTAGCC+TGG | + | chr5.3:37291030-37291049 | None:intergenic | 40.0% | |
| GAAAAGGAAAAGAAGTGGAC+AGG | - | chr5.3:37291567-37291586 | MS.gene97490:intron | 40.0% | |
| GAAGCCTTAATTGTCGAACT+TGG | + | chr5.3:37291768-37291787 | None:intergenic | 40.0% | |
| GACAGATTAAGAATCTCTGG+TGG | + | chr5.3:37292254-37292273 | None:intergenic | 40.0% | |
| GGAAAAACACCTTGTCCATT+CGG | + | chr5.3:37291067-37291086 | None:intergenic | 40.0% | |
| GGAAACTGAGATAAACTCTG+AGG | + | chr5.3:37291088-37291107 | None:intergenic | 40.0% | |
| GGAGGAATACATACATGTCA+GGG | - | chr5.3:37291833-37291852 | MS.gene97490:intron | 40.0% | |
| GGAGGGAAAAAATAAGTGAG+AGG | - | chr5.3:37291984-37292003 | MS.gene97490:intron | 40.0% | |
| GGCTAATGCTATGATGAAAG+GGG | - | chr5.3:37291030-37291049 | MS.gene97490:CDS | 40.0% | |
| GGTGGGAAAATACAAAGAGA+AGG | + | chr5.3:37292236-37292255 | None:intergenic | 40.0% | |
| GTGATGTAGTGAACGCTTAT+GGG | - | chr5.3:37291170-37291189 | MS.gene97490:intron | 40.0% | |
| GTTCGACAATTAAGGCTTCT+GGG | - | chr5.3:37291769-37291788 | MS.gene97490:CDS | 40.0% | |
| TCAATATTGAAATCCAGCCG+TGG | + | chr5.3:37292618-37292637 | None:intergenic | 40.0% | |
| TGATGTAGTGAACGCTTATG+GGG | - | chr5.3:37291171-37291190 | MS.gene97490:intron | 40.0% | |
| TGCAAATTCATCTGTTGGGT+TGG | - | chr5.3:37290766-37290785 | MS.gene97490:intron | 40.0% | |
| TGTAGTTCTTGAGCTCTACT+AGG | + | chr5.3:37291693-37291712 | None:intergenic | 40.0% | |
| TGTATGTATTCCTCCTTAGG+TGG | + | chr5.3:37291828-37291847 | None:intergenic | 40.0% | |
| TGTGTAGATTAGTGCACATG+AGG | - | chr5.3:37293096-37293115 | MS.gene97490:CDS | 40.0% | |
| TTTCTTCAAGAACTTGTGCC+TGG | - | chr5.3:37292013-37292032 | MS.gene97490:intron | 40.0% | |
| TTTGCACCAAATCTCCAATC+AGG | + | chr5.3:37290752-37290771 | None:intergenic | 40.0% | |
| ! | AGTGTTGGAGTTGTAAACGA+TGG | + | chr5.3:37292354-37292373 | None:intergenic | 40.0% |
| ! | ATCACTGATTGAATCATCCC+TGG | + | chr5.3:37292845-37292864 | None:intergenic | 40.0% |
| ! | GGAATTAGGAAAGATGGGTT+TGG | - | chr5.3:37290956-37290975 | MS.gene97490:CDS | 40.0% |
| ! | TTCAACGACAAGTTGAGGTA+TGG | - | chr5.3:37292198-37292217 | MS.gene97490:CDS | 40.0% |
| !! | AGAATTTTGAGAGCCCTGTT+TGG | + | chr5.3:37291802-37291821 | None:intergenic | 40.0% |
| !! | ATGTATGCCGGTTCAATTCA+TGG | - | chr5.3:37291211-37291230 | MS.gene97490:intron | 40.0% |
| !! | ATGTTGGAAGGTACTACTAG+TGG | - | chr5.3:37291514-37291533 | MS.gene97490:intron | 40.0% |
| !! | CTGTTGGGTTGGTTTCAATT+GGG | - | chr5.3:37290777-37290796 | MS.gene97490:intron | 40.0% |
| !! | TCTCAGTTTCCTACTGATTC+TGG | - | chr5.3:37291097-37291116 | MS.gene97490:CDS | 40.0% |
| !! | TCTGTTGGGTTGGTTTCAAT+TGG | - | chr5.3:37290776-37290795 | MS.gene97490:intron | 40.0% |
| !!! | GGTTTTTTACCGAATGGACA+AGG | - | chr5.3:37291055-37291074 | MS.gene97490:CDS | 40.0% |
| AACCCTGAGAACCAACAGAA+GGG | - | chr5.3:37291732-37291751 | MS.gene97490:CDS | 45.0% | |
| ACAAGATGGTTCCCCAATGT+TGG | - | chr5.3:37291498-37291517 | MS.gene97490:intron | 45.0% | |
| ACACAGTTAACACCGTTGAG+TGG | - | chr5.3:37292911-37292930 | MS.gene97490:CDS | 45.0% | |
| AGAGAGTGATGATCCGAATG+TGG | - | chr5.3:37291291-37291310 | MS.gene97490:CDS | 45.0% | |
| AGGATTCAAGGAGCCAAATC+AGG | - | chr5.3:37292934-37292953 | MS.gene97490:CDS | 45.0% | |
| AGTGGAGAGCCTTCTATGAA+AGG | - | chr5.3:37291532-37291551 | MS.gene97490:intron | 45.0% | |
| ATGCCACCTGATTGGAGATT+TGG | - | chr5.3:37290743-37290762 | MS.gene97490:intron | 45.0% | |
| ATGTTCATCTGCCTCAATGG+TGG | - | chr5.3:37290844-37290863 | MS.gene97490:intron | 45.0% | |
| ATGTTTGCAGGTCACTGGTA+AGG | - | chr5.3:37292136-37292155 | MS.gene97490:CDS | 45.0% | |
| CCATTACATCCATCTCAACC+AGG | - | chr5.3:37292824-37292843 | MS.gene97490:CDS | 45.0% | |
| CCGGTTCAATTCATGGAACT+AGG | - | chr5.3:37291218-37291237 | MS.gene97490:intron | 45.0% | |
| CCTGGTTGAGATGGATGTAA+TGG | + | chr5.3:37292827-37292846 | None:intergenic | 45.0% | |
| GAATGATAAAAGCGAGGGTC+GGG | - | chr5.3:37291381-37291400 | MS.gene97490:intron | 45.0% | |
| GACGAATGGTCCCAAAAGTT+AGG | + | chr5.3:37290881-37290900 | None:intergenic | 45.0% | |
| GGAAAAGAAGTGGACAGGTA+TGG | - | chr5.3:37291572-37291591 | MS.gene97490:intron | 45.0% | |
| GGAAATCCTAGTGTGGATGA+AGG | + | chr5.3:37292779-37292798 | None:intergenic | 45.0% | |
| GGATCATCACTCTCTTGTGT+TGG | + | chr5.3:37291286-37291305 | None:intergenic | 45.0% | |
| GGTTGAGATGGATGTAATGG+AGG | + | chr5.3:37292824-37292843 | None:intergenic | 45.0% | |
| GTAGCCAATTGCTCAACAGA+TGG | + | chr5.3:37291343-37291362 | None:intergenic | 45.0% | |
| GTAGCTGCTTCAACCACATT+CGG | + | chr5.3:37291307-37291326 | None:intergenic | 45.0% | |
| GTCACCATCTGTTGAGCAAT+TGG | - | chr5.3:37291336-37291355 | MS.gene97490:intron | 45.0% | |
| GTCACTTCAACGACAAGTTG+AGG | - | chr5.3:37292193-37292212 | MS.gene97490:CDS | 45.0% | |
| GTCATGTTCATCTGCCTCAA+TGG | - | chr5.3:37290841-37290860 | MS.gene97490:intron | 45.0% | |
| GTGGTTGAAGCAGCTACAAA+AGG | - | chr5.3:37291310-37291329 | MS.gene97490:CDS | 45.0% | |
| GTTCTTCGAAGGATATCGGA+CGG | + | chr5.3:37292884-37292903 | None:intergenic | 45.0% | |
| GTTGGACTTCGAGTAGCAAA+TGG | - | chr5.3:37291256-37291275 | MS.gene97490:intron | 45.0% | |
| TCCTTGAATCCTCCACTCAA+CGG | + | chr5.3:37292926-37292945 | None:intergenic | 45.0% | |
| TCTGGGAAGAATGCCAAACA+GGG | - | chr5.3:37291786-37291805 | MS.gene97490:intron | 45.0% | |
| TGAATCATCCCTGGTTGAGA+TGG | + | chr5.3:37292836-37292855 | None:intergenic | 45.0% | |
| TGATTCCGACAGAGGTGAAT+CGG | - | chr5.3:37291450-37291469 | MS.gene97490:intron | 45.0% | |
| TGTATCTTACCCTCTCTGCA+AGG | + | chr5.3:37291890-37291909 | None:intergenic | 45.0% | |
| TGTTGATGTTTGCAGGTCAC+TGG | - | chr5.3:37292131-37292150 | MS.gene97490:CDS | 45.0% | |
| TTATGGGGTTCCTCAATCCA+TGG | - | chr5.3:37291186-37291205 | MS.gene97490:intron | 45.0% | |
| TTCTTCGAAGGATATCGGAC+GGG | + | chr5.3:37292883-37292902 | None:intergenic | 45.0% | |
| ! | AGGAAAGATGGGTTTGGCTT+TGG | - | chr5.3:37290962-37290981 | MS.gene97490:CDS | 45.0% |
| ! | ATTTTCACTGCAGGTGAGGA+GGG | - | chr5.3:37291967-37291986 | MS.gene97490:intron | 45.0% |
| ! | CTCTAGAGGAAATCCTAGTG+TGG | + | chr5.3:37292786-37292805 | None:intergenic | 45.0% |
| ! | GCTTTAGATGCCTGATGTGT+GGG | - | chr5.3:37293205-37293224 | MS.gene97490:CDS | 45.0% |
| ! | GTTTGAGGTGGATGGAAATG+AGG | - | chr5.3:37290694-37290713 | MS.gene97490:CDS | 45.0% |
| ! | TGCTTTAGATGCCTGATGTG+TGG | - | chr5.3:37293204-37293223 | MS.gene97490:CDS | 45.0% |
| ! | TTCTGGGAAGAATGCCAAAC+AGG | - | chr5.3:37291785-37291804 | MS.gene97490:intron | 45.0% |
| !!! | GGGGATGGTTTTTTACCGAA+TGG | - | chr5.3:37291049-37291068 | MS.gene97490:CDS | 45.0% |
| AAAGTCACCTTGCTGCATCC+AGG | + | chr5.3:37292034-37292053 | None:intergenic | 50.0% | |
| ACCGTTGAGTGGAGGATTCA+AGG | - | chr5.3:37292922-37292941 | MS.gene97490:CDS | 50.0% | |
| CAACCCTGAGAACCAACAGA+AGG | - | chr5.3:37291731-37291750 | MS.gene97490:CDS | 50.0% | |
| CAATCCATGGCGATGTATGC+CGG | - | chr5.3:37291199-37291218 | MS.gene97490:intron | 50.0% | |
| CACAGTTCTTGCAGCTGCAA+TGG | + | chr5.3:37292967-37292986 | None:intergenic | 50.0% | |
| CAGTTAACACCGTTGAGTGG+AGG | - | chr5.3:37292914-37292933 | MS.gene97490:CDS | 50.0% | |
| CTAGTGGTATGCCACCTGAT+TGG | - | chr5.3:37290735-37290754 | MS.gene97490:intron | 50.0% | |
| CTTCCCTTCATCTTGAGACC+CGG | + | chr5.3:37291407-37291426 | None:intergenic | 50.0% | |
| GATGGTTCCCCAATGTTGGA+AGG | - | chr5.3:37291502-37291521 | MS.gene97490:intron | 50.0% | |
| GATTCCGACAGAGGTGAATC+GGG | - | chr5.3:37291451-37291470 | MS.gene97490:intron | 50.0% | |
| GCACCAAATCTCCAATCAGG+TGG | + | chr5.3:37290749-37290768 | None:intergenic | 50.0% | |
| GGAAGAGGTGGTCATGATCA+TGG | - | chr5.3:37290983-37291002 | MS.gene97490:CDS | 50.0% | |
| GGACTTCGAGTAGCAAATGG+AGG | - | chr5.3:37291259-37291278 | MS.gene97490:intron | 50.0% | |
| GTTGTTGGTCACCCTTCTGT+TGG | + | chr5.3:37291746-37291765 | None:intergenic | 50.0% | |
| TGAGGTGGATGGAAATGAGG+AGG | - | chr5.3:37290697-37290716 | MS.gene97490:CDS | 50.0% | |
| TGCAACAGTAAATCCACGGC+TGG | - | chr5.3:37292602-37292621 | MS.gene97490:CDS | 50.0% | |
| TTACCCTCTCTGCAAGGCTA+TGG | + | chr5.3:37291884-37291903 | None:intergenic | 50.0% | |
| TTAGATGCCTGATGTGTGGG+CGG | - | chr5.3:37293208-37293227 | MS.gene97490:CDS | 50.0% | |
| ! | CTGGATTTTCACTGCAGGTG+AGG | - | chr5.3:37291963-37291982 | MS.gene97490:intron | 50.0% |
| ! | GATTTTCACTGCAGGTGAGG+AGG | - | chr5.3:37291966-37291985 | MS.gene97490:intron | 50.0% |
| ! | GCATACATCGCCATGGATTG+AGG | + | chr5.3:37291199-37291218 | None:intergenic | 50.0% |
| ! | GTTTTATCGAAAGGGCTGCG+AGG | - | chr5.3:37291119-37291138 | MS.gene97490:CDS | 50.0% |
| !! | CACCCTTCTGTTGGTTCTCA+GGG | + | chr5.3:37291737-37291756 | None:intergenic | 50.0% |
| !! | GATGGGTTTGGCTTTGGAAG+AGG | - | chr5.3:37290968-37290987 | MS.gene97490:CDS | 50.0% |
| !! | TCACCCTTCTGTTGGTTCTC+AGG | + | chr5.3:37291738-37291757 | None:intergenic | 50.0% |
| !!! | AGGTTCTCGTGTTTTGGTGG+AGG | - | chr5.3:37291139-37291158 | MS.gene97490:CDS | 50.0% |
| !!! | GGTTCTCGTGTTTTGGTGGA+GGG | - | chr5.3:37291140-37291159 | MS.gene97490:CDS | 50.0% |
| ACATACATGTCAGGGCTCGC+CGG | - | chr5.3:37291841-37291860 | MS.gene97490:intron | 55.0% | |
| ACTTGTGCCTGGATGCAGCA+AGG | - | chr5.3:37292024-37292043 | MS.gene97490:intron | 55.0% | |
| CACTGGTAAGGCAGTGATGC+TGG | - | chr5.3:37292148-37292167 | MS.gene97490:CDS | 55.0% | |
| CAGATTCTTCACCAACGGCC+TGG | - | chr5.3:37292752-37292771 | MS.gene97490:CDS | 55.0% | |
| CCTAGTGTGGATGAAGGACC+AGG | + | chr5.3:37292773-37292792 | None:intergenic | 55.0% | |
| CCTGGTCCTTCATCCACACT+AGG | - | chr5.3:37292770-37292789 | MS.gene97490:CDS | 55.0% | |
| GGAACTAGGGATGCTCTTGC+AGG | - | chr5.3:37291232-37291251 | MS.gene97490:intron | 55.0% | |
| GGTGAATCGGGTGACGATGA+TGG | - | chr5.3:37291463-37291482 | MS.gene97490:intron | 55.0% | |
| GTCACCCGATTCACCTCTGT+CGG | + | chr5.3:37291458-37291477 | None:intergenic | 55.0% | |
| TGAACCGGCATACATCGCCA+TGG | + | chr5.3:37291206-37291225 | None:intergenic | 55.0% | |
| ! | ACAGCCATAGCCTTGCAGAG+AGG | - | chr5.3:37291877-37291896 | MS.gene97490:intron | 55.0% |
| ! | CAGCCATAGCCTTGCAGAGA+GGG | - | chr5.3:37291878-37291897 | MS.gene97490:intron | 55.0% |
| ! | GAATCGGGTGACGATGATGG+TGG | - | chr5.3:37291466-37291485 | MS.gene97490:intron | 55.0% |
| ! | GCTGCGAGGTTCTCGTGTTT+TGG | - | chr5.3:37291133-37291152 | MS.gene97490:CDS | 55.0% |
| ! | GGCTGTTTGTTGCTTGACCC+CGG | + | chr5.3:37291863-37291882 | None:intergenic | 55.0% |
| ! | TCGGACGGGTTTGCCATGTT+TGG | + | chr5.3:37292869-37292888 | None:intergenic | 55.0% |
| !! | GCGAGGTTCTCGTGTTTTGG+TGG | - | chr5.3:37291136-37291155 | MS.gene97490:CDS | 55.0% |
| !! | GGGTTTGGCTTTGGAAGAGG+TGG | - | chr5.3:37290971-37290990 | MS.gene97490:CDS | 55.0% |
| AGGGATGCTCTTGCAGGCGT+TGG | - | chr5.3:37291238-37291257 | MS.gene97490:intron | 60.0% | |
| ATAAAAGCGAGGGTCGGGCC+GGG | - | chr5.3:37291386-37291405 | MS.gene97490:intron | 60.0% | |
| ATACATGTCAGGGCTCGCCG+GGG | - | chr5.3:37291843-37291862 | MS.gene97490:intron | 60.0% | |
| CATACATGTCAGGGCTCGCC+GGG | - | chr5.3:37291842-37291861 | MS.gene97490:intron | 60.0% | |
| GATAAAAGCGAGGGTCGGGC+CGG | - | chr5.3:37291385-37291404 | MS.gene97490:intron | 60.0% | |
| GGGCCGGGTCTCAAGATGAA+GGG | - | chr5.3:37291401-37291420 | MS.gene97490:intron | 60.0% | |
| TGGATGAAGGACCAGGCCGT+TGG | + | chr5.3:37292766-37292785 | None:intergenic | 60.0% | |
| !! | GACGATGATGGTGGTCGTGG+CGG | - | chr5.3:37291475-37291494 | MS.gene97490:intron | 60.0% |
| !! | GGTGACGATGATGGTGGTCG+TGG | - | chr5.3:37291472-37291491 | MS.gene97490:intron | 60.0% |
| AGCTCGTCCGCCCACACATC+AGG | + | chr5.3:37293218-37293237 | None:intergenic | 65.0% | |
| CGGGCCGGGTCTCAAGATGA+AGG | - | chr5.3:37291400-37291419 | MS.gene97490:intron | 65.0% | |
| !! | GGTGGTCGTGGCGGACAAGA+TGG | - | chr5.3:37291484-37291503 | MS.gene97490:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 37290677 | 37293257 | 37290677 | ID=MS.gene97490 |
| chr5.3 | mRNA | 37290677 | 37293257 | 37290677 | ID=MS.gene97490.t1;Parent=MS.gene97490 |
| chr5.3 | exon | 37292346 | 37293257 | 37292346 | ID=MS.gene97490.t1.exon1;Parent=MS.gene97490.t1 |
| chr5.3 | CDS | 37292346 | 37293257 | 37292346 | ID=cds.MS.gene97490.t1;Parent=MS.gene97490.t1 |
| chr5.3 | exon | 37292035 | 37292262 | 37292035 | ID=MS.gene97490.t1.exon2;Parent=MS.gene97490.t1 |
| chr5.3 | CDS | 37292035 | 37292262 | 37292035 | ID=cds.MS.gene97490.t1;Parent=MS.gene97490.t1 |
| chr5.3 | exon | 37291889 | 37291954 | 37291889 | ID=MS.gene97490.t1.exon3;Parent=MS.gene97490.t1 |
| chr5.3 | CDS | 37291889 | 37291954 | 37291889 | ID=cds.MS.gene97490.t1;Parent=MS.gene97490.t1 |
| chr5.3 | exon | 37291720 | 37291788 | 37291720 | ID=MS.gene97490.t1.exon4;Parent=MS.gene97490.t1 |
| chr5.3 | CDS | 37291720 | 37291788 | 37291720 | ID=cds.MS.gene97490.t1;Parent=MS.gene97490.t1 |
| chr5.3 | exon | 37291278 | 37291349 | 37291278 | ID=MS.gene97490.t1.exon5;Parent=MS.gene97490.t1 |
| chr5.3 | CDS | 37291278 | 37291349 | 37291278 | ID=cds.MS.gene97490.t1;Parent=MS.gene97490.t1 |
| chr5.3 | exon | 37290914 | 37291179 | 37290914 | ID=MS.gene97490.t1.exon6;Parent=MS.gene97490.t1 |
| chr5.3 | CDS | 37290914 | 37291179 | 37290914 | ID=cds.MS.gene97490.t1;Parent=MS.gene97490.t1 |
| chr5.3 | exon | 37290677 | 37290722 | 37290677 | ID=MS.gene97490.t1.exon7;Parent=MS.gene97490.t1 |
| chr5.3 | CDS | 37290677 | 37290722 | 37290677 | ID=cds.MS.gene97490.t1;Parent=MS.gene97490.t1 |
| Gene Sequence |
| Protein sequence |
