Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065667.t1 | XP_013470093.1 | 76.1 | 377 | 15 | 2 | 1 | 305 | 1 | 374 | 9.40E-139 | 503.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065667.t1 | A2RVM8 | 34.3 | 350 | 110 | 9 | 1 | 267 | 1 | 313 | 1.7e-27 | 124.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065667.t1 | A0A072VR18 | 76.1 | 377 | 15 | 2 | 1 | 305 | 1 | 374 | 6.8e-139 | 503.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene065667 | 0.809811 | 1.57E-50 | -1.69E-46 |
| MS.gene049190 | MS.gene065667 | 0.857228 | 1.88E-62 | -1.69E-46 |
| MS.gene049271 | MS.gene065667 | 0.813682 | 2.26E-51 | -1.69E-46 |
| MS.gene049341 | MS.gene065667 | 0.816124 | 6.50E-52 | -1.69E-46 |
| MS.gene049350 | MS.gene065667 | 0.80337 | 3.60E-49 | -1.69E-46 |
| MS.gene049404 | MS.gene065667 | 0.818042 | 2.41E-52 | -1.69E-46 |
| MS.gene049501 | MS.gene065667 | 0.814264 | 1.68E-51 | -1.69E-46 |
| MS.gene049672 | MS.gene065667 | 0.835317 | 1.80E-56 | -1.69E-46 |
| MS.gene049711 | MS.gene065667 | 0.828914 | 6.90E-55 | -1.69E-46 |
| MS.gene049770 | MS.gene065667 | 0.815403 | 9.41E-52 | -1.69E-46 |
| MS.gene049821 | MS.gene065667 | 0.831674 | 1.46E-55 | -1.69E-46 |
| MS.gene049824 | MS.gene065667 | 0.806636 | 7.47E-50 | -1.69E-46 |
| MS.gene049825 | MS.gene065667 | 0.809054 | 2.29E-50 | -1.69E-46 |
| MS.gene049850 | MS.gene065667 | 0.857483 | 1.58E-62 | -1.69E-46 |
| MS.gene049873 | MS.gene065667 | 0.822472 | 2.33E-53 | -1.69E-46 |
| MS.gene050020 | MS.gene065667 | 0.861068 | 1.33E-63 | -1.69E-46 |
| MS.gene05016 | MS.gene065667 | 0.816248 | 6.10E-52 | -1.69E-46 |
| MS.gene050241 | MS.gene065667 | 0.812181 | 4.82E-51 | -1.69E-46 |
| MS.gene05045 | MS.gene065667 | 0.85638 | 3.35E-62 | -1.69E-46 |
| MS.gene050559 | MS.gene065667 | 0.804656 | 1.95E-49 | -1.69E-46 |
| MS.gene050561 | MS.gene065667 | 0.80681 | 6.87E-50 | -1.69E-46 |
| MS.gene050586 | MS.gene065667 | 0.803013 | 4.27E-49 | -1.69E-46 |
| MS.gene050780 | MS.gene065667 | 0.8075 | 4.90E-50 | -1.69E-46 |
| MS.gene050807 | MS.gene065667 | 0.838133 | 3.45E-57 | -1.69E-46 |
| MS.gene050808 | MS.gene065667 | 0.813706 | 2.24E-51 | -1.69E-46 |
| MS.gene050901 | MS.gene065667 | 0.833869 | 4.16E-56 | -1.69E-46 |
| MS.gene050959 | MS.gene065667 | 0.804476 | 2.12E-49 | -1.69E-46 |
| MS.gene051018 | MS.gene065667 | 0.818468 | 1.93E-52 | -1.69E-46 |
| MS.gene051199 | MS.gene065667 | 0.837182 | 6.04E-57 | -1.69E-46 |
| MS.gene051247 | MS.gene065667 | 0.873811 | 1.10E-67 | -1.69E-46 |
| MS.gene051265 | MS.gene065667 | 0.82493 | 6.18E-54 | -1.69E-46 |
| MS.gene051279 | MS.gene065667 | 0.817663 | 2.93E-52 | -1.69E-46 |
| MS.gene051328 | MS.gene065667 | 0.810466 | 1.14E-50 | -1.69E-46 |
| MS.gene051388 | MS.gene065667 | 0.804894 | 1.73E-49 | -1.69E-46 |
| MS.gene05157 | MS.gene065667 | 0.859563 | 3.79E-63 | -1.69E-46 |
| MS.gene051700 | MS.gene065667 | 0.811258 | 7.66E-51 | -1.69E-46 |
| MS.gene051719 | MS.gene065667 | 0.86085 | 1.55E-63 | -1.69E-46 |
| MS.gene051720 | MS.gene065667 | 0.884614 | 1.65E-71 | -1.69E-46 |
| MS.gene051744 | MS.gene065667 | 0.875935 | 2.08E-68 | -1.69E-46 |
| MS.gene051957 | MS.gene065667 | 0.844109 | 9.26E-59 | -1.69E-46 |
| MS.gene052020 | MS.gene065667 | 0.848973 | 4.35E-60 | -1.69E-46 |
| MS.gene052133 | MS.gene065667 | 0.853304 | 2.61E-61 | -1.69E-46 |
| MS.gene052488 | MS.gene065667 | 0.807526 | 4.84E-50 | -1.69E-46 |
| MS.gene052516 | MS.gene065667 | 0.833752 | 4.45E-56 | -1.69E-46 |
| MS.gene052519 | MS.gene065667 | 0.823888 | 1.09E-53 | -1.69E-46 |
| MS.gene052582 | MS.gene065667 | 0.827315 | 1.67E-54 | -1.69E-46 |
| MS.gene052584 | MS.gene065667 | 0.834415 | 3.04E-56 | -1.69E-46 |
| MS.gene052611 | MS.gene065667 | 0.840296 | 9.47E-58 | -1.69E-46 |
| MS.gene052612 | MS.gene065667 | 0.818237 | 2.18E-52 | -1.69E-46 |
| MS.gene052613 | MS.gene065667 | 0.808264 | 3.37E-50 | -1.69E-46 |
| MS.gene052616 | MS.gene065667 | 0.801047 | 1.08E-48 | -1.69E-46 |
| MS.gene052665 | MS.gene065667 | 0.831425 | 1.68E-55 | -1.69E-46 |
| MS.gene052732 | MS.gene065667 | 0.822521 | 2.27E-53 | -1.69E-46 |
| MS.gene052773 | MS.gene065667 | 0.820814 | 5.62E-53 | -1.69E-46 |
| MS.gene052863 | MS.gene065667 | 0.809067 | 2.27E-50 | -1.69E-46 |
| MS.gene052879 | MS.gene065667 | 0.811225 | 7.79E-51 | -1.69E-46 |
| MS.gene052896 | MS.gene065667 | 0.810715 | 1.00E-50 | -1.69E-46 |
| MS.gene053122 | MS.gene065667 | 0.809345 | 1.98E-50 | -1.69E-46 |
| MS.gene053144 | MS.gene065667 | 0.870147 | 1.82E-66 | -1.69E-46 |
| MS.gene053174 | MS.gene065667 | 0.8271 | 1.89E-54 | -1.69E-46 |
| MS.gene053221 | MS.gene065667 | 0.802064 | 6.70E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene065667 | 0.876606 | 1.22E-68 | -1.69E-46 |
| MS.gene053566 | MS.gene065667 | 0.824122 | 9.58E-54 | -1.69E-46 |
| MS.gene053581 | MS.gene065667 | 0.845079 | 5.08E-59 | -1.69E-46 |
| MS.gene053597 | MS.gene065667 | 0.807305 | 5.39E-50 | -1.69E-46 |
| MS.gene053599 | MS.gene065667 | 0.838496 | 2.78E-57 | -1.69E-46 |
| MS.gene053883 | MS.gene065667 | 0.843465 | 1.38E-58 | -1.69E-46 |
| MS.gene053998 | MS.gene065667 | 0.832099 | 1.15E-55 | -1.69E-46 |
| MS.gene05415 | MS.gene065667 | 0.807634 | 4.59E-50 | -1.69E-46 |
| MS.gene054550 | MS.gene065667 | 0.832393 | 9.70E-56 | -1.69E-46 |
| MS.gene054584 | MS.gene065667 | 0.871579 | 6.14E-67 | -1.69E-46 |
| MS.gene054651 | MS.gene065667 | 0.826557 | 2.54E-54 | -1.69E-46 |
| MS.gene054775 | MS.gene065667 | 0.822068 | 2.89E-53 | -1.69E-46 |
| MS.gene054801 | MS.gene065667 | 0.801834 | 7.47E-49 | -1.69E-46 |
| MS.gene055357 | MS.gene065667 | 0.807486 | 4.94E-50 | -1.69E-46 |
| MS.gene055359 | MS.gene065667 | 0.802475 | 5.51E-49 | -1.69E-46 |
| MS.gene055465 | MS.gene065667 | 0.873188 | 1.78E-67 | -1.69E-46 |
| MS.gene055466 | MS.gene065667 | 0.879772 | 9.48E-70 | -1.69E-46 |
| MS.gene055468 | MS.gene065667 | 0.854757 | 9.95E-62 | -1.69E-46 |
| MS.gene055469 | MS.gene065667 | 0.803305 | 3.71E-49 | -1.69E-46 |
| MS.gene055512 | MS.gene065667 | 0.829229 | 5.78E-55 | -1.69E-46 |
| MS.gene055537 | MS.gene065667 | 0.853784 | 1.90E-61 | -1.69E-46 |
| MS.gene055580 | MS.gene065667 | -0.84617 | 2.57E-59 | -1.69E-46 |
| MS.gene055778 | MS.gene065667 | 0.845514 | 3.87E-59 | -1.69E-46 |
| MS.gene055818 | MS.gene065667 | 0.83482 | 2.40E-56 | -1.69E-46 |
| MS.gene055890 | MS.gene065667 | 0.829445 | 5.13E-55 | -1.69E-46 |
| MS.gene055891 | MS.gene065667 | 0.81014 | 1.34E-50 | -1.69E-46 |
| MS.gene056005 | MS.gene065667 | 0.804338 | 2.27E-49 | -1.69E-46 |
| MS.gene056043 | MS.gene065667 | -0.81309 | 3.05E-51 | -1.69E-46 |
| MS.gene05604 | MS.gene065667 | 0.816763 | 4.68E-52 | -1.69E-46 |
| MS.gene056050 | MS.gene065667 | 0.819811 | 9.55E-53 | -1.69E-46 |
| MS.gene056173 | MS.gene065667 | 0.812866 | 3.42E-51 | -1.69E-46 |
| MS.gene056174 | MS.gene065667 | 0.812149 | 4.90E-51 | -1.69E-46 |
| MS.gene056215 | MS.gene065667 | 0.815937 | 7.16E-52 | -1.69E-46 |
| MS.gene056228 | MS.gene065667 | 0.830013 | 3.73E-55 | -1.69E-46 |
| MS.gene056308 | MS.gene065667 | 0.831727 | 1.42E-55 | -1.69E-46 |
| MS.gene056366 | MS.gene065667 | 0.846272 | 2.41E-59 | -1.69E-46 |
| MS.gene056498 | MS.gene065667 | 0.812438 | 4.24E-51 | -1.69E-46 |
| MS.gene056507 | MS.gene065667 | 0.805453 | 1.33E-49 | -1.69E-46 |
| MS.gene056542 | MS.gene065667 | 0.808262 | 3.38E-50 | -1.69E-46 |
| MS.gene056543 | MS.gene065667 | 0.812023 | 5.22E-51 | -1.69E-46 |
| MS.gene056545 | MS.gene065667 | 0.816785 | 4.62E-52 | -1.69E-46 |
| MS.gene056553 | MS.gene065667 | 0.843488 | 1.36E-58 | -1.69E-46 |
| MS.gene056595 | MS.gene065667 | 0.803063 | 4.17E-49 | -1.69E-46 |
| MS.gene056643 | MS.gene065667 | 0.808773 | 2.63E-50 | -1.69E-46 |
| MS.gene056859 | MS.gene065667 | 0.809419 | 1.91E-50 | -1.69E-46 |
| MS.gene057060 | MS.gene065667 | 0.817345 | 3.46E-52 | -1.69E-46 |
| MS.gene057314 | MS.gene065667 | 0.822563 | 2.22E-53 | -1.69E-46 |
| MS.gene057444 | MS.gene065667 | 0.849952 | 2.32E-60 | -1.69E-46 |
| MS.gene057446 | MS.gene065667 | 0.806616 | 7.54E-50 | -1.69E-46 |
| MS.gene057693 | MS.gene065667 | 0.800791 | 1.22E-48 | -1.69E-46 |
| MS.gene057915 | MS.gene065667 | 0.848458 | 6.05E-60 | -1.69E-46 |
| MS.gene058087 | MS.gene065667 | 0.806973 | 6.34E-50 | -1.69E-46 |
| MS.gene058168 | MS.gene065667 | 0.80583 | 1.10E-49 | -1.69E-46 |
| MS.gene05847 | MS.gene065667 | 0.815257 | 1.01E-51 | -1.69E-46 |
| MS.gene058625 | MS.gene065667 | 0.833632 | 4.77E-56 | -1.69E-46 |
| MS.gene058829 | MS.gene065667 | 0.802459 | 5.55E-49 | -1.69E-46 |
| MS.gene05894 | MS.gene065667 | 0.809062 | 2.28E-50 | -1.69E-46 |
| MS.gene058979 | MS.gene065667 | 0.804738 | 1.87E-49 | -1.69E-46 |
| MS.gene059015 | MS.gene065667 | 0.848941 | 4.45E-60 | -1.69E-46 |
| MS.gene059084 | MS.gene065667 | 0.823316 | 1.48E-53 | -1.69E-46 |
| MS.gene059154 | MS.gene065667 | 0.82805 | 1.11E-54 | -1.69E-46 |
| MS.gene059272 | MS.gene065667 | 0.800566 | 1.36E-48 | -1.69E-46 |
| MS.gene05954 | MS.gene065667 | 0.811731 | 6.05E-51 | -1.69E-46 |
| MS.gene059625 | MS.gene065667 | 0.848503 | 5.88E-60 | -1.69E-46 |
| MS.gene059937 | MS.gene065667 | 0.827994 | 1.15E-54 | -1.69E-46 |
| MS.gene060194 | MS.gene065667 | 0.80554 | 1.27E-49 | -1.69E-46 |
| MS.gene060429 | MS.gene065667 | 0.853335 | 2.56E-61 | -1.69E-46 |
| MS.gene060519 | MS.gene065667 | 0.85455 | 1.14E-61 | -1.69E-46 |
| MS.gene060521 | MS.gene065667 | 0.829432 | 5.16E-55 | -1.69E-46 |
| MS.gene060587 | MS.gene065667 | 0.856958 | 2.26E-62 | -1.69E-46 |
| MS.gene060884 | MS.gene065667 | 0.826027 | 3.40E-54 | -1.69E-46 |
| MS.gene060886 | MS.gene065667 | 0.822621 | 2.15E-53 | -1.69E-46 |
| MS.gene061176 | MS.gene065667 | 0.84579 | 3.26E-59 | -1.69E-46 |
| MS.gene061177 | MS.gene065667 | 0.844062 | 9.54E-59 | -1.69E-46 |
| MS.gene061178 | MS.gene065667 | 0.845391 | 4.18E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065667.t1 | MTR_1g107565 | 93.860 | 228 | 11 | 1 | 78 | 305 | 150 | 374 | 7.46e-143 | 407 |
| MS.gene065667.t1 | MTR_1g107565 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 4.31e-47 | 162 |
| MS.gene065667.t1 | MTR_2g022250 | 70.130 | 77 | 20 | 1 | 1 | 77 | 1 | 74 | 1.68e-28 | 114 |
| MS.gene065667.t1 | MTR_4g117140 | 67.532 | 77 | 22 | 1 | 1 | 77 | 1 | 74 | 4.58e-27 | 110 |
| MS.gene065667.t1 | MTR_4g117220 | 67.532 | 77 | 22 | 1 | 1 | 77 | 1 | 74 | 6.53e-27 | 110 |
| MS.gene065667.t1 | MTR_1g082650 | 66.234 | 77 | 23 | 1 | 1 | 77 | 1 | 74 | 1.18e-26 | 110 |
| MS.gene065667.t1 | MTR_4g065780 | 87.273 | 55 | 7 | 0 | 201 | 255 | 31 | 85 | 1.38e-26 | 105 |
| MS.gene065667.t1 | MTR_7g108560 | 66.197 | 71 | 24 | 0 | 7 | 77 | 16 | 86 | 5.03e-25 | 102 |
| MS.gene065667.t1 | MTR_2g022240 | 63.636 | 77 | 25 | 1 | 1 | 77 | 1 | 74 | 2.46e-22 | 97.1 |
| MS.gene065667.t1 | MTR_7g113110 | 60.000 | 65 | 26 | 0 | 13 | 77 | 33 | 97 | 5.84e-20 | 89.4 |
| MS.gene065667.t1 | MTR_3g067750 | 57.576 | 66 | 28 | 0 | 10 | 75 | 9 | 74 | 7.14e-20 | 86.3 |
| MS.gene065667.t1 | MTR_4g119820 | 59.091 | 66 | 27 | 0 | 10 | 75 | 71 | 136 | 1.41e-19 | 88.2 |
| MS.gene065667.t1 | MTR_2g436830 | 61.765 | 68 | 26 | 0 | 10 | 77 | 12 | 79 | 1.04e-17 | 82.0 |
| MS.gene065667.t1 | MTR_1g083310 | 53.623 | 69 | 31 | 1 | 10 | 77 | 12 | 80 | 3.62e-16 | 78.6 |
| MS.gene065667.t1 | MTR_8g091420 | 37.190 | 121 | 70 | 3 | 14 | 129 | 30 | 149 | 5.70e-14 | 68.6 |
| MS.gene065667.t1 | MTR_3g087770 | 50.746 | 67 | 33 | 0 | 11 | 77 | 28 | 94 | 6.04e-14 | 68.6 |
| MS.gene065667.t1 | MTR_5g097550 | 56.452 | 62 | 26 | 1 | 15 | 75 | 15 | 76 | 1.93e-13 | 69.3 |
| MS.gene065667.t1 | MTR_1g030630 | 43.939 | 66 | 37 | 0 | 12 | 77 | 24 | 89 | 7.34e-13 | 65.5 |
| MS.gene065667.t1 | MTR_6g026890 | 37.705 | 61 | 38 | 0 | 17 | 77 | 20 | 80 | 6.66e-12 | 62.8 |
| MS.gene065667.t1 | MTR_5g025150 | 39.394 | 66 | 40 | 0 | 12 | 77 | 22 | 87 | 8.67e-12 | 62.4 |
| MS.gene065667.t1 | MTR_1g078090 | 38.889 | 72 | 44 | 0 | 10 | 81 | 50 | 121 | 1.16e-11 | 62.8 |
| MS.gene065667.t1 | MTR_1g092670 | 40.909 | 66 | 39 | 0 | 13 | 78 | 4 | 69 | 2.34e-11 | 59.3 |
| MS.gene065667.t1 | MTR_4g073040 | 39.437 | 71 | 42 | 1 | 8 | 77 | 23 | 93 | 5.74e-11 | 60.5 |
| MS.gene065667.t1 | MTR_2g091235 | 40.323 | 62 | 37 | 0 | 17 | 78 | 6 | 67 | 7.30e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065667.t1 | AT1G23000 | 60.714 | 112 | 43 | 1 | 1 | 112 | 1 | 111 | 6.74e-35 | 130 |
| MS.gene065667.t1 | AT1G23000 | 60.714 | 112 | 43 | 1 | 1 | 112 | 61 | 171 | 2.09e-34 | 129 |
| MS.gene065667.t1 | AT3G06130 | 72.727 | 77 | 18 | 1 | 1 | 77 | 1 | 74 | 9.90e-32 | 121 |
| MS.gene065667.t1 | AT3G06130 | 72.727 | 77 | 18 | 1 | 1 | 77 | 1 | 74 | 3.41e-31 | 122 |
| MS.gene065667.t1 | AT5G19090 | 71.429 | 77 | 19 | 1 | 1 | 77 | 1 | 74 | 3.24e-30 | 119 |
| MS.gene065667.t1 | AT5G19090 | 71.429 | 77 | 19 | 1 | 1 | 77 | 1 | 74 | 3.24e-30 | 119 |
| MS.gene065667.t1 | AT5G19090 | 71.429 | 77 | 19 | 1 | 1 | 77 | 1 | 74 | 9.02e-30 | 119 |
| MS.gene065667.t1 | AT5G19090 | 71.429 | 77 | 19 | 1 | 1 | 77 | 1 | 74 | 9.02e-30 | 119 |
| MS.gene065667.t1 | AT5G19090 | 71.429 | 77 | 19 | 1 | 1 | 77 | 1 | 74 | 9.02e-30 | 119 |
| MS.gene065667.t1 | AT3G05220 | 65.672 | 67 | 23 | 0 | 9 | 75 | 6 | 72 | 2.99e-24 | 103 |
| MS.gene065667.t1 | AT5G27690 | 52.703 | 74 | 34 | 1 | 5 | 77 | 21 | 94 | 8.39e-21 | 91.7 |
| MS.gene065667.t1 | AT5G37860 | 49.351 | 77 | 34 | 1 | 12 | 83 | 9 | 85 | 4.86e-18 | 82.4 |
| MS.gene065667.t1 | AT1G56210 | 57.143 | 63 | 27 | 0 | 13 | 75 | 40 | 102 | 2.04e-17 | 82.0 |
| MS.gene065667.t1 | AT1G06330 | 41.791 | 67 | 39 | 0 | 12 | 78 | 1 | 67 | 1.04e-12 | 65.1 |
| MS.gene065667.t1 | AT3G56891 | 42.623 | 61 | 35 | 0 | 17 | 77 | 20 | 80 | 1.64e-12 | 65.1 |
| MS.gene065667.t1 | AT3G56891 | 43.636 | 55 | 31 | 0 | 23 | 77 | 3 | 57 | 1.39e-11 | 62.0 |
| MS.gene065667.t1 | AT1G71050 | 40.909 | 66 | 39 | 0 | 12 | 77 | 27 | 92 | 3.08e-11 | 61.2 |
Find 65 sgRNAs with CRISPR-Local
Find 131 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCATAACCATGTTCTGATT+TGG | 0.207548 | 1.4:+83050303 | None:intergenic |
| CAGCAGAAGGTAACAGTTTC+AGG | 0.218037 | 1.4:-83050723 | MS.gene065667:CDS |
| TCATAACCATGTTCTGATTT+GGG | 0.272787 | 1.4:+83050304 | None:intergenic |
| GCTGGTAGTGCTACTGTTCT+AGG | 0.303996 | 1.4:-83050108 | MS.gene065667:CDS |
| TTAACATAGATGGTGGATAT+TGG | 0.307758 | 1.4:+83050010 | None:intergenic |
| ACCAATGTCACTCGCCCTTT+TGG | 0.321785 | 1.4:+83050176 | None:intergenic |
| GGTGGAAATTCCAATGGTTT+AGG | 0.330691 | 1.4:-83050087 | MS.gene065667:CDS |
| TTCATGTTCATTAACATAGA+TGG | 0.342463 | 1.4:+83050000 | None:intergenic |
| TTGTAATAATAGCCGGTATT+AGG | 0.353066 | 1.4:+83049877 | None:intergenic |
| CTTTAGCATCTGAAAATGAT+TGG | 0.354821 | 1.4:+83050413 | None:intergenic |
| GAAGTTGAACAATGCTCAAT+TGG | 0.375959 | 1.4:-83050238 | MS.gene065667:CDS |
| TTTGCATAGGAGTAATTTGC+AGG | 0.391852 | 1.4:+83049838 | None:intergenic |
| AAACTCCTTCAGAGAATTGA+AGG | 0.417205 | 1.4:-83051286 | MS.gene065667:intron |
| GTTATGAAGGAAGGTGCTAA+TGG | 0.420368 | 1.4:-83050288 | MS.gene065667:CDS |
| CCAGTAACAAAACCACCATT+TGG | 0.437509 | 1.4:+83050033 | None:intergenic |
| ATCAAGAAACTAGTAAGATC+TGG | 0.446205 | 1.4:-83050678 | MS.gene065667:CDS |
| CTTTAAGCTCCTTAAAATCC+AGG | 0.466184 | 1.4:-83051540 | MS.gene065667:intron |
| CAATGCTCAATTGGCTCAGT+TGG | 0.471941 | 1.4:-83050229 | MS.gene065667:CDS |
| AATGCTGGCAATGGAAATAG+TGG | 0.481459 | 1.4:-83050339 | MS.gene065667:CDS |
| AATGGAAATAGTGGCAAGAA+AGG | 0.499764 | 1.4:-83050330 | MS.gene065667:CDS |
| TCTATGTTAATGAACATGAA+TGG | 0.505347 | 1.4:-83049997 | MS.gene065667:CDS |
| TTATGAAGGAAGGTGCTAAT+GGG | 0.505662 | 1.4:-83050287 | MS.gene065667:CDS |
| AAATCAGAACATGGTTATGA+AGG | 0.507037 | 1.4:-83050301 | MS.gene065667:CDS |
| TTACATTATTGAACAGCTGC+TGG | 0.507630 | 1.4:+83049756 | None:intergenic |
| TCAACCTTGGAGAATCCAAA+AGG | 0.510252 | 1.4:-83050191 | MS.gene065667:CDS |
| TCCACTGCATCTATTCCAAA+TGG | 0.510572 | 1.4:-83050048 | MS.gene065667:CDS |
| ATTATAATTGTAATAATAGC+CGG | 0.512654 | 1.4:+83049870 | None:intergenic |
| TCCAAAAGGGCGAGTGACAT+TGG | 0.516238 | 1.4:-83050177 | MS.gene065667:CDS |
| GTTCTGCATCTATTTGAACT+TGG | 0.517770 | 1.4:+83050745 | None:intergenic |
| GGGAACAATAACAATGGTGC+TGG | 0.520248 | 1.4:-83050126 | MS.gene065667:CDS |
| GATGCAAACAATGTGAAGAA+AGG | 0.525694 | 1.4:-83050381 | MS.gene065667:CDS |
| CCGGTATTAGGAGGAACAAA+AGG | 0.531347 | 1.4:+83049889 | None:intergenic |
| GGTGCTATGATGAATTTAGC+TGG | 0.532345 | 1.4:-83050156 | MS.gene065667:CDS |
| GGAAATTCCAATGGTTTAGG+AGG | 0.533330 | 1.4:-83050084 | MS.gene065667:CDS |
| GCTCAATTGGCTCAGTTGGT+TGG | 0.533914 | 1.4:-83050225 | MS.gene065667:CDS |
| AGTGACCTTCAATTCTCTGA+AGG | 0.534789 | 1.4:+83051281 | None:intergenic |
| AAGATGAACAATGCTGGCAA+TGG | 0.540672 | 1.4:-83050348 | MS.gene065667:CDS |
| GTTCTAGGTGGAAATTCCAA+TGG | 0.542544 | 1.4:-83050093 | MS.gene065667:CDS |
| CATTGATGAACATGCAGGCA+AGG | 0.543733 | 1.4:-83049954 | MS.gene065667:CDS |
| AGCCTCAGATGATGTATCAC+AGG | 0.555215 | 1.4:-83049915 | MS.gene065667:CDS |
| CAGAACATGGTTATGAAGGA+AGG | 0.555580 | 1.4:-83050297 | MS.gene065667:CDS |
| ATCTTCATTGATGAACATGC+AGG | 0.556065 | 1.4:-83049959 | MS.gene065667:CDS |
| TGCATGTTCATCAATGAAGA+TGG | 0.558115 | 1.4:+83049961 | None:intergenic |
| TGCAAATGCTTGTTATCCAA+CGG | 0.566769 | 1.4:-83049821 | MS.gene065667:CDS |
| ATAGCTAAGATGAACAATGC+TGG | 0.570218 | 1.4:-83050354 | MS.gene065667:CDS |
| ATGTTCATTAACATAGATGG+TGG | 0.570507 | 1.4:+83050003 | None:intergenic |
| AGGAAAACCTCCTAAACCAT+TGG | 0.574088 | 1.4:+83050077 | None:intergenic |
| AATAGATGCAGAACAGCAGA+AGG | 0.582210 | 1.4:-83050736 | MS.gene065667:CDS |
| GGTAACAGTTTCAGGTAGTG+TGG | 0.582801 | 1.4:-83050715 | MS.gene065667:CDS |
| CAACCTTGGAGAATCCAAAA+GGG | 0.584061 | 1.4:-83050190 | MS.gene065667:CDS |
| ATAGATGCAGTGGATCCTGC+AGG | 0.590027 | 1.4:+83050057 | None:intergenic |
| TAATAATAGCCGGTATTAGG+AGG | 0.594611 | 1.4:+83049880 | None:intergenic |
| CTGGAAAATATGCTGAGCCC+TGG | 0.596330 | 1.4:-83050659 | MS.gene065667:intron |
| ACCATTTGGAATAGATGCAG+TGG | 0.604596 | 1.4:+83050047 | None:intergenic |
| TGGATAACAAGCATTTGCAT+AGG | 0.605903 | 1.4:+83049825 | None:intergenic |
| ACTGCATCTATTCCAAATGG+TGG | 0.607866 | 1.4:-83050045 | MS.gene065667:CDS |
| GGTAATGAAAGTCTCAACCT+TGG | 0.624155 | 1.4:-83050204 | MS.gene065667:CDS |
| TTTAATGGGAACAATAACAA+TGG | 0.630005 | 1.4:-83050132 | MS.gene065667:CDS |
| AAAGTGAACATTCACTGTGA+TGG | 0.643761 | 1.4:-83051328 | MS.gene065667:CDS |
| AGGAAACCCAAATCAGAACA+TGG | 0.652284 | 1.4:-83050310 | MS.gene065667:CDS |
| TGGGATTGAGCAGAAAACAA+TGG | 0.655937 | 1.4:-83050268 | MS.gene065667:CDS |
| TGTTCATCAATGAAGATGGA+TGG | 0.664920 | 1.4:+83049965 | None:intergenic |
| GCTGCAGAGTGATCATCCGT+TGG | 0.673460 | 1.4:+83049805 | None:intergenic |
| GACCTGTGATACATCATCTG+AGG | 0.691567 | 1.4:+83049913 | None:intergenic |
| GGTAGTGCTACTGTTCTAGG+TGG | 0.717323 | 1.4:-83050105 | MS.gene065667:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTTTTTTAATTTTTTT+TGG | - | chr1.4:83050497-83050516 | MS.gene065667:intron | 0.0% |
| !! | AACTAAACTAAAATAATAGA+AGG | + | chr1.4:83049882-83049901 | None:intergenic | 15.0% |
| !! | ACTAAACTAAAATAATAGAA+GGG | + | chr1.4:83049881-83049900 | None:intergenic | 15.0% |
| !! | ATTATAATTGTAATAATAGC+CGG | + | chr1.4:83051446-83051465 | None:intergenic | 15.0% |
| !! | TAAAAAAAAGACCAAATATT+AGG | + | chr1.4:83049906-83049925 | None:intergenic | 15.0% |
| !! | TTTATGGATAATGTTAATAA+GGG | + | chr1.4:83049811-83049830 | None:intergenic | 15.0% |
| !!! | TTTTATGGATAATGTTAATA+AGG | + | chr1.4:83049812-83049831 | None:intergenic | 15.0% |
| !! | TGAATATTATGAATATGATG+AGG | - | chr1.4:83050832-83050851 | MS.gene065667:intron | 20.0% |
| !! | TTATGGATAATGTTAATAAG+GGG | + | chr1.4:83049810-83049829 | None:intergenic | 20.0% |
| !! | TTTCTTGAAGTTAAAATGTA+CGG | - | chr1.4:83050128-83050147 | MS.gene065667:CDS | 20.0% |
| !!! | ATTTTAACTTCAAGAAAACA+AGG | + | chr1.4:83050125-83050144 | None:intergenic | 20.0% |
| !!! | TAGTTTAGTTTCCTAATATT+TGG | - | chr1.4:83049892-83049911 | MS.gene065667:CDS | 20.0% |
| ! | ACTATATGGATATGGTTAAT+TGG | - | chr1.4:83050470-83050489 | MS.gene065667:intron | 25.0% |
| ! | ATAATATTCATCATCCTCTT+CGG | + | chr1.4:83050822-83050841 | None:intergenic | 25.0% |
| ! | TAAAATAATAGAAGGGAGAA+GGG | + | chr1.4:83049874-83049893 | None:intergenic | 25.0% |
| ! | TAAACACCTATAGAACAAAA+GGG | + | chr1.4:83050548-83050567 | None:intergenic | 25.0% |
| ! | TCTATGTTAATGAACATGAA+TGG | - | chr1.4:83051316-83051335 | MS.gene065667:CDS | 25.0% |
| ! | TTAAAGGGAGACATAAAAAA+TGG | - | chr1.4:83050271-83050290 | MS.gene065667:CDS | 25.0% |
| ! | TTCATGTTCATTAACATAGA+TGG | + | chr1.4:83051316-83051335 | None:intergenic | 25.0% |
| ! | TTTAATGGGAACAATAACAA+TGG | - | chr1.4:83051181-83051200 | MS.gene065667:intron | 25.0% |
| !! | TTTAGTTTACTCACAATGAT+GGG | - | chr1.4:83050225-83050244 | MS.gene065667:CDS | 25.0% |
| !!! | AGCATGTTGTTTTAGTTTTA+TGG | + | chr1.4:83049827-83049846 | None:intergenic | 25.0% |
| !!! | ATGAATTTAGCTGGTTTTAA+TGG | - | chr1.4:83051166-83051185 | MS.gene065667:intron | 25.0% |
| !!! | TGAATTTAGCTGGTTTTAAT+GGG | - | chr1.4:83051167-83051186 | MS.gene065667:intron | 25.0% |
| AAAATAATAGAAGGGAGAAG+GGG | + | chr1.4:83049873-83049892 | None:intergenic | 30.0% | |
| AAATCAGAACATGGTTATGA+AGG | - | chr1.4:83051012-83051031 | MS.gene065667:intron | 30.0% | |
| AAGAACAAAGGACAAAAACA+AGG | - | chr1.4:83050740-83050759 | MS.gene065667:CDS | 30.0% | |
| ATACCTTAGTGTACACTATA+TGG | - | chr1.4:83050456-83050475 | MS.gene065667:intron | 30.0% | |
| ATCAAGAAACTAGTAAGATC+TGG | - | chr1.4:83050635-83050654 | MS.gene065667:intron | 30.0% | |
| ATGTTCATTAACATAGATGG+TGG | + | chr1.4:83051313-83051332 | None:intergenic | 30.0% | |
| CAAAAATCAGCAGAAATTTC+CGG | - | chr1.4:83050787-83050806 | MS.gene065667:intron | 30.0% | |
| CTAAAATAATAGAAGGGAGA+AGG | + | chr1.4:83049875-83049894 | None:intergenic | 30.0% | |
| CTTTAGCATCTGAAAATGAT+TGG | + | chr1.4:83050903-83050922 | None:intergenic | 30.0% | |
| GTAAACACCTATAGAACAAA+AGG | + | chr1.4:83050549-83050568 | None:intergenic | 30.0% | |
| TAACTCCCATGACTTATAAA+AGG | + | chr1.4:83050254-83050273 | None:intergenic | 30.0% | |
| TAGTGTACACTATATGGATA+TGG | - | chr1.4:83050462-83050481 | MS.gene065667:intron | 30.0% | |
| TATAAGTCATGGGAGTTAAA+GGG | - | chr1.4:83050256-83050275 | MS.gene065667:CDS | 30.0% | |
| TATCCATATAGTGTACACTA+AGG | + | chr1.4:83050462-83050481 | None:intergenic | 30.0% | |
| TCATAACCATGTTCTGATTT+GGG | + | chr1.4:83051012-83051031 | None:intergenic | 30.0% | |
| TTAGTTTACTCACAATGATG+GGG | - | chr1.4:83050226-83050245 | MS.gene065667:CDS | 30.0% | |
| TTATAAGTCATGGGAGTTAA+AGG | - | chr1.4:83050255-83050274 | MS.gene065667:CDS | 30.0% | |
| TTATGAATATGATGAGGAAG+AGG | - | chr1.4:83050838-83050857 | MS.gene065667:intron | 30.0% | |
| TTCATAACCATGTTCTGATT+TGG | + | chr1.4:83051013-83051032 | None:intergenic | 30.0% | |
| TTGTAATAATAGCCGGTATT+AGG | + | chr1.4:83051439-83051458 | None:intergenic | 30.0% | |
| ! | GTTTAGTTTACTCACAATGA+TGG | - | chr1.4:83050224-83050243 | MS.gene065667:CDS | 30.0% |
| ! | TTTTGACCCTTTTGTTCTAT+AGG | - | chr1.4:83050539-83050558 | MS.gene065667:intron | 30.0% |
| !! | CTTTTGATTCTGATTGTTGT+TGG | + | chr1.4:83050690-83050709 | None:intergenic | 30.0% |
| !! | TTAACATAGATGGTGGATAT+TGG | + | chr1.4:83051306-83051325 | None:intergenic | 30.0% |
| !!! | GCTACTTTTTAAATCTTCAG+TGG | - | chr1.4:83050336-83050355 | MS.gene065667:CDS | 30.0% |
| !!! | TTAATTTTTTTTGGCGTGCT+TGG | - | chr1.4:83050506-83050525 | MS.gene065667:intron | 30.0% |
| AAACTCCTTCAGAGAATTGA+AGG | - | chr1.4:83050027-83050046 | MS.gene065667:CDS | 35.0% | |
| AAAGTGAACATTCACTGTGA+TGG | - | chr1.4:83049985-83050004 | MS.gene065667:CDS | 35.0% | |
| AAATAATAGAAGGGAGAAGG+GGG | + | chr1.4:83049872-83049891 | None:intergenic | 35.0% | |
| AAATCTTCAGTGGAAAGCTT+AGG | - | chr1.4:83050346-83050365 | MS.gene065667:CDS | 35.0% | |
| AATGGAAATAGTGGCAAGAA+AGG | - | chr1.4:83050983-83051002 | MS.gene065667:intron | 35.0% | |
| ATAGCTAAGATGAACAATGC+TGG | - | chr1.4:83050959-83050978 | MS.gene065667:intron | 35.0% | |
| ATCTTCATTGATGAACATGC+AGG | - | chr1.4:83051354-83051373 | MS.gene065667:intron | 35.0% | |
| ATGTTAATAAGGGGAGAAAG+AGG | + | chr1.4:83049801-83049820 | None:intergenic | 35.0% | |
| CTTTAAGCTCCTTAAAATCC+AGG | - | chr1.4:83049773-83049792 | MS.gene065667:CDS | 35.0% | |
| GAAGTTGAACAATGCTCAAT+TGG | - | chr1.4:83051075-83051094 | MS.gene065667:intron | 35.0% | |
| GATGCAAACAATGTGAAGAA+AGG | - | chr1.4:83050932-83050951 | MS.gene065667:intron | 35.0% | |
| GTCAAAGATGACAAGAACAA+AGG | - | chr1.4:83050728-83050747 | MS.gene065667:CDS | 35.0% | |
| GTTCTGCATCTATTTGAACT+TGG | + | chr1.4:83050571-83050590 | None:intergenic | 35.0% | |
| TAATAATAGCCGGTATTAGG+AGG | + | chr1.4:83051436-83051455 | None:intergenic | 35.0% | |
| TGCATGTTCATCAATGAAGA+TGG | + | chr1.4:83051355-83051374 | None:intergenic | 35.0% | |
| TGGAAAGCTTAGGCTATAAA+AGG | - | chr1.4:83050356-83050375 | MS.gene065667:CDS | 35.0% | |
| TGGATAACAAGCATTTGCAT+AGG | + | chr1.4:83051491-83051510 | None:intergenic | 35.0% | |
| TGTTCATCAATGAAGATGGA+TGG | + | chr1.4:83051351-83051370 | None:intergenic | 35.0% | |
| TTACATTATTGAACAGCTGC+TGG | + | chr1.4:83051560-83051579 | None:intergenic | 35.0% | |
| ! | GGGTTCCTTTTATAAGTCAT+GGG | - | chr1.4:83050246-83050265 | MS.gene065667:CDS | 35.0% |
| ! | TTTGCATAGGAGTAATTTGC+AGG | + | chr1.4:83051478-83051497 | None:intergenic | 35.0% |
| !! | AAAAACAAGGACTGGTCAAA+GGG | - | chr1.4:83050753-83050772 | MS.gene065667:CDS | 35.0% |
| !! | TGCAAATGCTTGTTATCCAA+CGG | - | chr1.4:83051492-83051511 | MS.gene065667:intron | 35.0% |
| !! | TTATGAAGGAAGGTGCTAAT+GGG | - | chr1.4:83051026-83051045 | MS.gene065667:intron | 35.0% |
| !!! | AAAGAGGTACCTGGATTTTA+AGG | + | chr1.4:83049785-83049804 | None:intergenic | 35.0% |
| AAGATGAACAATGCTGGCAA+TGG | - | chr1.4:83050965-83050984 | MS.gene065667:intron | 40.0% | |
| AATAATAGAAGGGAGAAGGG+GGG | + | chr1.4:83049871-83049890 | None:intergenic | 40.0% | |
| AATAGATGCAGAACAGCAGA+AGG | - | chr1.4:83050577-83050596 | MS.gene065667:intron | 40.0% | |
| AATGCTGGCAATGGAAATAG+TGG | - | chr1.4:83050974-83050993 | MS.gene065667:intron | 40.0% | |
| ACTGCATCTATTCCAAATGG+TGG | - | chr1.4:83051268-83051287 | MS.gene065667:intron | 40.0% | |
| AGGAAAACCTCCTAAACCAT+TGG | + | chr1.4:83051239-83051258 | None:intergenic | 40.0% | |
| AGGAAACCCAAATCAGAACA+TGG | - | chr1.4:83051003-83051022 | MS.gene065667:intron | 40.0% | |
| AGTGACCTTCAATTCTCTGA+AGG | + | chr1.4:83050035-83050054 | None:intergenic | 40.0% | |
| CAAAGGACAAAAACAAGGAC+TGG | - | chr1.4:83050745-83050764 | MS.gene065667:CDS | 40.0% | |
| CAACCTTGGAGAATCCAAAA+GGG | - | chr1.4:83051123-83051142 | MS.gene065667:intron | 40.0% | |
| CAGAACATGGTTATGAAGGA+AGG | - | chr1.4:83051016-83051035 | MS.gene065667:intron | 40.0% | |
| CCAGTAACAAAACCACCATT+TGG | + | chr1.4:83051283-83051302 | None:intergenic | 40.0% | |
| GGAAATTCCAATGGTTTAGG+AGG | - | chr1.4:83051229-83051248 | MS.gene065667:intron | 40.0% | |
| GGTAATGAAAGTCTCAACCT+TGG | - | chr1.4:83051109-83051128 | MS.gene065667:intron | 40.0% | |
| GGTGGAAATTCCAATGGTTT+AGG | - | chr1.4:83051226-83051245 | MS.gene065667:intron | 40.0% | |
| TCAACCTTGGAGAATCCAAA+AGG | - | chr1.4:83051122-83051141 | MS.gene065667:intron | 40.0% | |
| TCCACTGCATCTATTCCAAA+TGG | - | chr1.4:83051265-83051284 | MS.gene065667:intron | 40.0% | |
| TGAATATGATGAGGAAGAGG+AGG | - | chr1.4:83050841-83050860 | MS.gene065667:intron | 40.0% | |
| TGGGATTGAGCAGAAAACAA+TGG | - | chr1.4:83051045-83051064 | MS.gene065667:intron | 40.0% | |
| ! | ACCATTTGGAATAGATGCAG+TGG | + | chr1.4:83051269-83051288 | None:intergenic | 40.0% |
| ! | CCTTTTGTTCCTCCTAATAC+CGG | - | chr1.4:83051424-83051443 | MS.gene065667:intron | 40.0% |
| ! | GGGGTTCCTTTTATAAGTCA+TGG | - | chr1.4:83050245-83050264 | MS.gene065667:CDS | 40.0% |
| ! | GGTGCTATGATGAATTTAGC+TGG | - | chr1.4:83051157-83051176 | MS.gene065667:intron | 40.0% |
| ! | GTTCTAGGTGGAAATTCCAA+TGG | - | chr1.4:83051220-83051239 | MS.gene065667:intron | 40.0% |
| !! | CAAAAACAAGGACTGGTCAA+AGG | - | chr1.4:83050752-83050771 | MS.gene065667:CDS | 40.0% |
| !! | GTTATGAAGGAAGGTGCTAA+TGG | - | chr1.4:83051025-83051044 | MS.gene065667:intron | 40.0% |
| !!! | CCAAATGGTGGTTTTGTTAC+TGG | - | chr1.4:83051280-83051299 | MS.gene065667:intron | 40.0% |
| !!! | TTGTTGGTTTTCTGAGACCA+GGG | + | chr1.4:83050674-83050693 | None:intergenic | 40.0% |
| AGCCTCAGATGATGTATCAC+AGG | - | chr1.4:83051398-83051417 | MS.gene065667:intron | 45.0% | |
| ATATGATGAGGAAGAGGAGG+AGG | - | chr1.4:83050844-83050863 | MS.gene065667:intron | 45.0% | |
| ATGAAGAGATGCGGTTCATC+AGG | - | chr1.4:83050870-83050889 | MS.gene065667:intron | 45.0% | |
| CAGCAGAAGGTAACAGTTTC+AGG | - | chr1.4:83050590-83050609 | MS.gene065667:intron | 45.0% | |
| CATTGATGAACATGCAGGCA+AGG | - | chr1.4:83051359-83051378 | MS.gene065667:intron | 45.0% | |
| CCGGTATTAGGAGGAACAAA+AGG | + | chr1.4:83051427-83051446 | None:intergenic | 45.0% | |
| GACCTGTGATACATCATCTG+AGG | + | chr1.4:83051403-83051422 | None:intergenic | 45.0% | |
| GGGAACAATAACAATGGTGC+TGG | - | chr1.4:83051187-83051206 | MS.gene065667:intron | 45.0% | |
| TCCTCTTCGGAACTAAAAGC+CGG | + | chr1.4:83050809-83050828 | None:intergenic | 45.0% | |
| TGAAGAGATGCGGTTCATCA+GGG | - | chr1.4:83050871-83050890 | MS.gene065667:intron | 45.0% | |
| ! | CAATGCTCAATTGGCTCAGT+TGG | - | chr1.4:83051084-83051103 | MS.gene065667:intron | 45.0% |
| ! | GGTAACAGTTTCAGGTAGTG+TGG | - | chr1.4:83050598-83050617 | MS.gene065667:intron | 45.0% |
| !!! | GTTGTTGGTTTTCTGAGACC+AGG | + | chr1.4:83050675-83050694 | None:intergenic | 45.0% |
| !!! | TATATATTTTTAAGAAAAAA+AGG | + | chr1.4:83050402-83050421 | None:intergenic | 5.0% |
| AGGAGGAGGATGAAGAGATG+CGG | - | chr1.4:83050861-83050880 | MS.gene065667:intron | 50.0% | |
| ATAGATGCAGTGGATCCTGC+AGG | + | chr1.4:83051259-83051278 | None:intergenic | 50.0% | |
| CTGGAAAATATGCTGAGCCC+TGG | - | chr1.4:83050654-83050673 | MS.gene065667:intron | 50.0% | |
| TCCAAAAGGGCGAGTGACAT+TGG | - | chr1.4:83051136-83051155 | MS.gene065667:intron | 50.0% | |
| ! | ACCAATGTCACTCGCCCTTT+TGG | + | chr1.4:83051140-83051159 | None:intergenic | 50.0% |
| ! | GCTCAATTGGCTCAGTTGGT+TGG | - | chr1.4:83051088-83051107 | MS.gene065667:intron | 50.0% |
| ! | GCTGGTAGTGCTACTGTTCT+AGG | - | chr1.4:83051205-83051224 | MS.gene065667:intron | 50.0% |
| ! | GGTAGTGCTACTGTTCTAGG+TGG | - | chr1.4:83051208-83051227 | MS.gene065667:intron | 50.0% |
| ! | GGTTTAGGAGGTTTTCCTGC+AGG | - | chr1.4:83051241-83051260 | MS.gene065667:intron | 50.0% |
| ! | TCGCCCTTTTGGATTCTCCA+AGG | + | chr1.4:83051129-83051148 | None:intergenic | 50.0% |
| !! | TAAGGGGAGAAAGAGGTACC+TGG | + | chr1.4:83049794-83049813 | None:intergenic | 50.0% |
| !!! | TCCGGCTTTTAGTTCCGAAG+AGG | - | chr1.4:83050805-83050824 | MS.gene065667:intron | 50.0% |
| GCTGCAGAGTGATCATCCGT+TGG | + | chr1.4:83051511-83051530 | None:intergenic | 55.0% | |
| TGATGAGGAAGAGGAGGAGG+AGG | - | chr1.4:83050847-83050866 | MS.gene065667:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 83049756 | 83051579 | 83049756 | ID=MS.gene065667 |
| chr1.4 | mRNA | 83049756 | 83051579 | 83049756 | ID=MS.gene065667.t1;Parent=MS.gene065667 |
| chr1.4 | exon | 83051541 | 83051579 | 83051541 | ID=MS.gene065667.t1.exon1;Parent=MS.gene065667.t1 |
| chr1.4 | CDS | 83051541 | 83051579 | 83051541 | ID=cds.MS.gene065667.t1;Parent=MS.gene065667.t1 |
| chr1.4 | exon | 83051287 | 83051362 | 83051287 | ID=MS.gene065667.t1.exon2;Parent=MS.gene065667.t1 |
| chr1.4 | CDS | 83051287 | 83051362 | 83051287 | ID=cds.MS.gene065667.t1;Parent=MS.gene065667.t1 |
| chr1.4 | exon | 83050660 | 83050774 | 83050660 | ID=MS.gene065667.t1.exon3;Parent=MS.gene065667.t1 |
| chr1.4 | CDS | 83050660 | 83050774 | 83050660 | ID=cds.MS.gene065667.t1;Parent=MS.gene065667.t1 |
| chr1.4 | exon | 83049756 | 83050443 | 83049756 | ID=MS.gene065667.t1.exon4;Parent=MS.gene065667.t1 |
| chr1.4 | CDS | 83049756 | 83050443 | 83049756 | ID=cds.MS.gene065667.t1;Parent=MS.gene065667.t1 |
| Gene Sequence |
| Protein sequence |
