Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene052762.t1 | XP_003604615.1 | 95.2 | 520 | 25 | 0 | 1 | 520 | 58 | 577 | 1.30E-270 | 941.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene052762.t1 | Q9M390 | 73.1 | 517 | 137 | 2 | 1 | 515 | 48 | 564 | 8.4e-205 | 714.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene052762.t1 | G7JMY6 | 95.2 | 520 | 25 | 0 | 1 | 520 | 58 | 577 | 9.7e-271 | 941.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene052754 | MS.gene052762 | 0.8417 | 4.05E-58 | -1.69E-46 |
MS.gene052758 | MS.gene052762 | 0.894296 | 2.82E-75 | -1.69E-46 |
MS.gene052762 | MS.gene064519 | 0.801389 | 9.21E-49 | -1.69E-46 |
MS.gene052762 | MS.gene070835 | 0.810802 | 9.61E-51 | -1.69E-46 |
MS.gene052762 | MS.gene07939 | 0.800926 | 1.15E-48 | -1.69E-46 |
MS.gene052762 | MS.gene08908 | 0.811423 | 7.05E-51 | -1.69E-46 |
MS.gene052762 | MS.gene27100 | 0.815666 | 8.23E-52 | -1.69E-46 |
MS.gene052762 | MS.gene27363 | 0.800592 | 1.34E-48 | -1.69E-46 |
MS.gene052762 | MS.gene33478 | 0.846831 | 1.70E-59 | -1.69E-46 |
MS.gene052762 | MS.gene36952 | 0.808211 | 3.46E-50 | -1.69E-46 |
MS.gene052762 | MS.gene39429 | 0.80035 | 1.50E-48 | -1.69E-46 |
MS.gene052762 | MS.gene39679 | 0.807721 | 4.40E-50 | -1.69E-46 |
MS.gene052762 | MS.gene42798 | 0.802558 | 5.30E-49 | -1.69E-46 |
MS.gene052762 | MS.gene46956 | 0.817791 | 2.75E-52 | -1.69E-46 |
MS.gene052762 | MS.gene65641 | 0.803779 | 2.96E-49 | -1.69E-46 |
MS.gene052762 | MS.gene71006 | 0.804739 | 1.87E-49 | -1.69E-46 |
MS.gene052762 | MS.gene90950 | 0.816006 | 6.91E-52 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene052762.t1 | MTR_4g015080 | 95.385 | 520 | 24 | 0 | 1 | 520 | 58 | 577 | 0.0 | 1026 |
MS.gene052762.t1 | MTR_7g067010 | 83.333 | 516 | 86 | 0 | 1 | 516 | 48 | 563 | 0.0 | 900 |
MS.gene052762.t1 | MTR_3g462710 | 69.790 | 523 | 155 | 3 | 1 | 520 | 48 | 570 | 0.0 | 744 |
MS.gene052762.t1 | MTR_3g462710 | 70.282 | 461 | 134 | 3 | 63 | 520 | 1 | 461 | 0.0 | 661 |
MS.gene052762.t1 | MTR_3g112470 | 48.069 | 518 | 255 | 6 | 1 | 515 | 47 | 553 | 2.12e-168 | 488 |
MS.gene052762.t1 | MTR_3g112460 | 47.876 | 518 | 256 | 6 | 1 | 515 | 47 | 553 | 1.56e-167 | 486 |
MS.gene052762.t1 | MTR_5g055000 | 46.947 | 524 | 267 | 8 | 2 | 517 | 43 | 563 | 2.08e-163 | 476 |
MS.gene052762.t1 | MTR_7g098200 | 43.654 | 520 | 280 | 4 | 1 | 513 | 53 | 566 | 4.02e-156 | 458 |
MS.gene052762.t1 | MTR_3g112450 | 46.641 | 521 | 260 | 9 | 1 | 515 | 47 | 555 | 6.32e-155 | 454 |
MS.gene052762.t1 | MTR_7g098230 | 43.954 | 521 | 279 | 4 | 1 | 514 | 50 | 564 | 2.05e-153 | 451 |
MS.gene052762.t1 | MTR_5g012290 | 46.080 | 523 | 270 | 8 | 1 | 514 | 51 | 570 | 2.43e-152 | 448 |
MS.gene052762.t1 | MTR_7g088825 | 43.702 | 524 | 285 | 6 | 4 | 519 | 49 | 570 | 6.27e-152 | 447 |
MS.gene052762.t1 | MTR_7g098200 | 43.462 | 520 | 271 | 5 | 1 | 513 | 53 | 556 | 3.31e-151 | 445 |
MS.gene052762.t1 | MTR_7g098180 | 42.395 | 526 | 289 | 5 | 1 | 518 | 55 | 574 | 5.43e-151 | 445 |
MS.gene052762.t1 | MTR_1g116930 | 42.747 | 517 | 285 | 5 | 4 | 517 | 50 | 558 | 1.48e-150 | 443 |
MS.gene052762.t1 | MTR_7g010820 | 45.936 | 529 | 264 | 7 | 4 | 517 | 53 | 574 | 4.82e-150 | 442 |
MS.gene052762.t1 | MTR_7g098220 | 43.238 | 525 | 285 | 3 | 1 | 518 | 10 | 528 | 5.41e-150 | 441 |
MS.gene052762.t1 | MTR_7g098220 | 43.238 | 525 | 285 | 3 | 1 | 518 | 54 | 572 | 3.70e-149 | 440 |
MS.gene052762.t1 | MTR_3g072300 | 43.243 | 518 | 288 | 4 | 1 | 515 | 48 | 562 | 4.44e-147 | 434 |
MS.gene052762.t1 | MTR_5g012270 | 43.619 | 525 | 280 | 8 | 1 | 514 | 53 | 572 | 9.24e-147 | 434 |
MS.gene052762.t1 | MTR_7g098040 | 42.035 | 521 | 289 | 3 | 1 | 514 | 58 | 572 | 2.76e-146 | 434 |
MS.gene052762.t1 | MTR_5g014150 | 42.533 | 529 | 293 | 5 | 1 | 520 | 68 | 594 | 6.36e-146 | 432 |
MS.gene052762.t1 | MTR_7g098160 | 40.691 | 521 | 296 | 3 | 1 | 514 | 57 | 571 | 7.99e-146 | 432 |
MS.gene052762.t1 | MTR_4g098800 | 44.163 | 514 | 273 | 6 | 4 | 509 | 63 | 570 | 1.34e-145 | 431 |
MS.gene052762.t1 | MTR_7g088790 | 43.156 | 526 | 287 | 7 | 3 | 519 | 55 | 577 | 1.41e-145 | 431 |
MS.gene052762.t1 | MTR_4g098800 | 44.163 | 514 | 273 | 6 | 4 | 509 | 128 | 635 | 8.08e-145 | 431 |
MS.gene052762.t1 | MTR_3g069500 | 43.269 | 520 | 281 | 7 | 1 | 519 | 59 | 565 | 8.64e-143 | 423 |
MS.gene052762.t1 | MTR_1g041835 | 42.692 | 520 | 286 | 5 | 1 | 514 | 51 | 564 | 6.44e-141 | 418 |
MS.gene052762.t1 | MTR_7g005930 | 41.553 | 515 | 290 | 7 | 1 | 511 | 59 | 566 | 7.10e-141 | 419 |
MS.gene052762.t1 | MTR_4g101380 | 44.106 | 526 | 279 | 7 | 1 | 514 | 51 | 573 | 7.98e-141 | 419 |
MS.gene052762.t1 | MTR_7g098090 | 39.924 | 526 | 298 | 4 | 1 | 514 | 57 | 576 | 1.08e-140 | 419 |
MS.gene052762.t1 | MTR_7g013270 | 42.447 | 523 | 286 | 9 | 4 | 520 | 117 | 630 | 1.59e-140 | 420 |
MS.gene052762.t1 | MTR_1g075440 | 41.571 | 522 | 290 | 6 | 1 | 514 | 52 | 566 | 1.65e-140 | 418 |
MS.gene052762.t1 | MTR_1g041815 | 42.885 | 520 | 285 | 5 | 1 | 514 | 51 | 564 | 5.41e-140 | 416 |
MS.gene052762.t1 | MTR_3g005010 | 42.337 | 522 | 267 | 7 | 1 | 517 | 54 | 546 | 3.03e-139 | 413 |
MS.gene052762.t1 | MTR_3g014790 | 43.726 | 526 | 267 | 6 | 1 | 515 | 41 | 548 | 5.01e-139 | 413 |
MS.gene052762.t1 | MTR_8g038880 | 41.698 | 530 | 276 | 5 | 1 | 517 | 44 | 553 | 6.77e-137 | 408 |
MS.gene052762.t1 | MTR_4g019580 | 40.577 | 520 | 301 | 6 | 1 | 518 | 60 | 573 | 2.66e-136 | 407 |
MS.gene052762.t1 | MTR_7g088820 | 39.885 | 524 | 305 | 6 | 4 | 519 | 52 | 573 | 2.30e-135 | 405 |
MS.gene052762.t1 | MTR_1g041875 | 42.200 | 500 | 273 | 5 | 1 | 495 | 53 | 541 | 7.16e-135 | 403 |
MS.gene052762.t1 | MTR_7g065080 | 40.153 | 523 | 295 | 7 | 1 | 519 | 55 | 563 | 2.51e-134 | 402 |
MS.gene052762.t1 | MTR_1g041885 | 42.032 | 502 | 275 | 5 | 1 | 497 | 6 | 496 | 4.97e-134 | 399 |
MS.gene052762.t1 | MTR_5g038060 | 42.065 | 523 | 288 | 7 | 4 | 514 | 58 | 577 | 8.39e-134 | 401 |
MS.gene052762.t1 | MTR_7g006540 | 41.243 | 531 | 290 | 9 | 1 | 514 | 87 | 612 | 1.43e-133 | 402 |
MS.gene052762.t1 | MTR_7g088820 | 40.275 | 509 | 294 | 6 | 19 | 519 | 5 | 511 | 2.42e-133 | 397 |
MS.gene052762.t1 | MTR_7g098200 | 42.576 | 458 | 250 | 4 | 63 | 513 | 1 | 452 | 1.65e-132 | 394 |
MS.gene052762.t1 | MTR_3g069440 | 41.762 | 522 | 296 | 6 | 1 | 519 | 57 | 573 | 3.12e-132 | 397 |
MS.gene052762.t1 | MTR_4g033325 | 41.731 | 520 | 271 | 8 | 4 | 518 | 58 | 550 | 1.01e-131 | 394 |
MS.gene052762.t1 | MTR_1g042310 | 39.615 | 520 | 303 | 5 | 1 | 514 | 6 | 520 | 4.34e-131 | 392 |
MS.gene052762.t1 | MTR_4g033315 | 41.233 | 519 | 277 | 7 | 4 | 518 | 58 | 552 | 4.70e-131 | 392 |
MS.gene052762.t1 | MTR_4g033310 | 41.233 | 519 | 277 | 7 | 4 | 518 | 58 | 552 | 4.70e-131 | 392 |
MS.gene052762.t1 | MTR_1g042310 | 39.615 | 520 | 303 | 5 | 1 | 514 | 13 | 527 | 5.10e-131 | 392 |
MS.gene052762.t1 | MTR_1g042310 | 39.615 | 520 | 303 | 5 | 1 | 514 | 50 | 564 | 2.95e-130 | 392 |
MS.gene052762.t1 | MTR_7g065080 | 40.900 | 489 | 271 | 7 | 35 | 519 | 2 | 476 | 3.46e-130 | 388 |
MS.gene052762.t1 | MTR_0294s0020 | 41.618 | 519 | 273 | 8 | 4 | 518 | 58 | 550 | 4.19e-130 | 390 |
MS.gene052762.t1 | MTR_3g069420 | 40.307 | 521 | 303 | 7 | 1 | 518 | 58 | 573 | 1.03e-129 | 390 |
MS.gene052762.t1 | MTR_7g111260 | 38.697 | 522 | 299 | 9 | 4 | 518 | 43 | 550 | 5.84e-126 | 380 |
MS.gene052762.t1 | MTR_4g114340 | 44.190 | 525 | 271 | 11 | 1 | 515 | 48 | 560 | 5.96e-126 | 380 |
MS.gene052762.t1 | MTR_8g469480 | 38.636 | 528 | 309 | 6 | 4 | 519 | 65 | 589 | 1.17e-125 | 380 |
MS.gene052762.t1 | MTR_2g017750 | 40.234 | 512 | 289 | 8 | 20 | 514 | 77 | 588 | 1.23e-125 | 380 |
MS.gene052762.t1 | MTR_4g033330 | 41.414 | 495 | 265 | 6 | 4 | 494 | 58 | 531 | 3.48e-123 | 371 |
MS.gene052762.t1 | MTR_5g085850 | 42.015 | 526 | 277 | 10 | 1 | 518 | 54 | 559 | 8.27e-123 | 372 |
MS.gene052762.t1 | MTR_4g107580 | 37.214 | 524 | 315 | 7 | 4 | 514 | 51 | 573 | 4.79e-122 | 370 |
MS.gene052762.t1 | MTR_4g107510 | 36.484 | 529 | 313 | 7 | 4 | 515 | 63 | 585 | 3.06e-121 | 369 |
MS.gene052762.t1 | MTR_3g100980 | 40.114 | 526 | 292 | 9 | 2 | 517 | 41 | 553 | 4.44e-120 | 365 |
MS.gene052762.t1 | MTR_1g085090 | 38.845 | 502 | 287 | 9 | 18 | 514 | 60 | 546 | 4.97e-120 | 365 |
MS.gene052762.t1 | MTR_4g033325 | 41.126 | 462 | 240 | 8 | 62 | 518 | 18 | 452 | 5.14e-119 | 358 |
MS.gene052762.t1 | MTR_7g088820 | 39.785 | 465 | 270 | 6 | 63 | 519 | 1 | 463 | 1.41e-117 | 355 |
MS.gene052762.t1 | MTR_4g033375 | 41.394 | 459 | 243 | 6 | 4 | 457 | 59 | 496 | 3.56e-117 | 355 |
MS.gene052762.t1 | MTR_4g107670 | 38.148 | 540 | 299 | 10 | 2 | 518 | 49 | 576 | 8.88e-117 | 356 |
MS.gene052762.t1 | MTR_8g087780 | 40.075 | 534 | 304 | 9 | 1 | 518 | 45 | 578 | 9.94e-117 | 357 |
MS.gene052762.t1 | MTR_2g005130 | 38.610 | 518 | 292 | 9 | 3 | 514 | 66 | 563 | 6.81e-116 | 355 |
MS.gene052762.t1 | MTR_4g033325 | 41.190 | 437 | 232 | 6 | 87 | 518 | 10 | 426 | 1.96e-115 | 348 |
MS.gene052762.t1 | MTR_4g033385 | 39.958 | 478 | 254 | 9 | 46 | 518 | 4 | 453 | 2.82e-115 | 348 |
MS.gene052762.t1 | MTR_3g100980 | 38.087 | 554 | 292 | 10 | 2 | 517 | 41 | 581 | 6.24e-114 | 350 |
MS.gene052762.t1 | MTR_8g087810 | 40.113 | 531 | 301 | 9 | 1 | 514 | 45 | 575 | 1.33e-113 | 348 |
MS.gene052762.t1 | MTR_4g033395 | 41.176 | 459 | 244 | 7 | 4 | 457 | 59 | 496 | 1.36e-113 | 345 |
MS.gene052762.t1 | MTR_4g107530 | 35.902 | 532 | 320 | 9 | 3 | 518 | 59 | 585 | 3.14e-113 | 348 |
MS.gene052762.t1 | MTR_8g469310 | 38.826 | 528 | 310 | 9 | 2 | 518 | 51 | 576 | 5.15e-112 | 344 |
MS.gene052762.t1 | MTR_8g469470 | 34.906 | 530 | 331 | 5 | 1 | 517 | 56 | 584 | 3.51e-110 | 340 |
MS.gene052762.t1 | MTR_4g123537 | 39.388 | 490 | 277 | 10 | 32 | 515 | 96 | 571 | 9.64e-110 | 339 |
MS.gene052762.t1 | MTR_5g038380 | 36.832 | 524 | 318 | 8 | 2 | 514 | 53 | 574 | 5.47e-109 | 336 |
MS.gene052762.t1 | MTR_7g098150 | 40.488 | 410 | 231 | 4 | 1 | 403 | 57 | 460 | 6.66e-107 | 328 |
MS.gene052762.t1 | MTR_1g009200 | 37.548 | 522 | 301 | 10 | 4 | 511 | 54 | 564 | 7.04e-104 | 323 |
MS.gene052762.t1 | MTR_1g026740 | 35.203 | 517 | 319 | 9 | 4 | 511 | 44 | 553 | 8.28e-104 | 323 |
MS.gene052762.t1 | MTR_5g038190 | 34.953 | 535 | 328 | 8 | 1 | 520 | 48 | 577 | 4.85e-103 | 321 |
MS.gene052762.t1 | MTR_8g103233 | 37.645 | 518 | 299 | 11 | 1 | 505 | 41 | 547 | 3.50e-102 | 319 |
MS.gene052762.t1 | MTR_4g107610 | 35.645 | 519 | 318 | 9 | 3 | 511 | 57 | 569 | 1.41e-99 | 313 |
MS.gene052762.t1 | MTR_1g026750 | 35.453 | 519 | 315 | 11 | 4 | 511 | 45 | 554 | 5.46e-98 | 308 |
MS.gene052762.t1 | MTR_2g101650 | 34.690 | 516 | 314 | 11 | 4 | 505 | 51 | 557 | 2.15e-97 | 306 |
MS.gene052762.t1 | MTR_2g101610 | 36.311 | 515 | 307 | 11 | 4 | 505 | 54 | 560 | 2.47e-96 | 305 |
MS.gene052762.t1 | MTR_6g008690 | 36.517 | 534 | 291 | 10 | 1 | 514 | 31 | 536 | 5.18e-96 | 301 |
MS.gene052762.t1 | MTR_1g057460 | 36.739 | 509 | 294 | 12 | 4 | 505 | 71 | 558 | 9.83e-96 | 302 |
MS.gene052762.t1 | MTR_2g101590 | 35.728 | 515 | 310 | 11 | 4 | 505 | 53 | 559 | 1.00e-95 | 303 |
MS.gene052762.t1 | MTR_1g057460 | 36.220 | 508 | 296 | 12 | 5 | 505 | 1 | 487 | 1.76e-95 | 299 |
MS.gene052762.t1 | MTR_1g026770 | 33.915 | 516 | 326 | 9 | 4 | 511 | 42 | 550 | 7.05e-95 | 299 |
MS.gene052762.t1 | MTR_7g098210 | 36.735 | 490 | 232 | 10 | 33 | 514 | 23 | 442 | 1.04e-94 | 295 |
MS.gene052762.t1 | MTR_7g064780 | 32.887 | 523 | 338 | 8 | 4 | 516 | 53 | 572 | 4.24e-94 | 298 |
MS.gene052762.t1 | MTR_2g101640 | 34.308 | 513 | 320 | 10 | 4 | 505 | 50 | 556 | 2.72e-93 | 297 |
MS.gene052762.t1 | MTR_4g024930 | 36.276 | 521 | 294 | 13 | 1 | 511 | 60 | 552 | 1.47e-89 | 286 |
MS.gene052762.t1 | MTR_0236s0050 | 35.897 | 507 | 299 | 11 | 5 | 505 | 1 | 487 | 7.32e-89 | 282 |
MS.gene052762.t1 | MTR_4g011280 | 33.528 | 513 | 322 | 10 | 4 | 505 | 59 | 563 | 2.34e-88 | 283 |
MS.gene052762.t1 | MTR_7g064800 | 33.771 | 533 | 324 | 13 | 3 | 516 | 52 | 574 | 3.17e-88 | 283 |
MS.gene052762.t1 | MTR_2g101560 | 32.370 | 519 | 328 | 9 | 1 | 505 | 51 | 560 | 5.35e-83 | 270 |
MS.gene052762.t1 | MTR_2g093160 | 31.670 | 521 | 329 | 8 | 4 | 516 | 48 | 549 | 4.36e-80 | 260 |
MS.gene052762.t1 | MTR_2g093180 | 31.931 | 523 | 326 | 9 | 4 | 516 | 48 | 550 | 7.27e-77 | 252 |
MS.gene052762.t1 | MTR_7g051880 | 30.966 | 507 | 316 | 8 | 5 | 511 | 53 | 525 | 2.94e-73 | 242 |
MS.gene052762.t1 | MTR_2g093640 | 30.303 | 528 | 327 | 10 | 4 | 516 | 48 | 549 | 1.76e-72 | 240 |
MS.gene052762.t1 | MTR_4g033310 | 39.527 | 296 | 168 | 3 | 225 | 518 | 202 | 488 | 4.58e-72 | 238 |
MS.gene052762.t1 | MTR_4g033310 | 48.921 | 139 | 64 | 2 | 4 | 142 | 58 | 189 | 2.08e-29 | 121 |
MS.gene052762.t1 | MTR_7g051830 | 30.769 | 507 | 317 | 8 | 5 | 511 | 53 | 525 | 1.26e-71 | 237 |
MS.gene052762.t1 | MTR_7g052600 | 30.375 | 507 | 319 | 8 | 5 | 511 | 53 | 525 | 1.98e-70 | 234 |
MS.gene052762.t1 | MTR_1g009170 | 32.426 | 404 | 210 | 10 | 100 | 494 | 9 | 358 | 7.26e-57 | 194 |
MS.gene052762.t1 | MTR_3g065350 | 39.264 | 163 | 93 | 2 | 283 | 445 | 1 | 157 | 2.22e-31 | 119 |
MS.gene052762.t1 | MTR_4g033390 | 42.353 | 85 | 49 | 0 | 429 | 513 | 30 | 114 | 4.80e-19 | 83.6 |
MS.gene052762.t1 | MTR_2g093650 | 25.455 | 220 | 105 | 5 | 291 | 508 | 34 | 196 | 1.36e-12 | 67.4 |
MS.gene052762.t1 | MTR_8g091265 | 36.538 | 104 | 62 | 2 | 248 | 347 | 6 | 109 | 1.42e-12 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene052762.t1 | AT3G54140 | 73.888 | 517 | 133 | 2 | 1 | 515 | 48 | 564 | 0.0 | 805 |
MS.gene052762.t1 | AT3G54140 | 73.888 | 517 | 133 | 2 | 1 | 515 | 48 | 564 | 0.0 | 805 |
MS.gene052762.t1 | AT5G01180 | 71.318 | 516 | 147 | 1 | 1 | 515 | 49 | 564 | 0.0 | 773 |
MS.gene052762.t1 | AT5G01180 | 71.318 | 516 | 147 | 1 | 1 | 515 | 49 | 564 | 0.0 | 773 |
MS.gene052762.t1 | AT5G01180 | 71.318 | 516 | 147 | 1 | 1 | 515 | 49 | 564 | 0.0 | 773 |
MS.gene052762.t1 | AT2G02040 | 59.847 | 523 | 201 | 6 | 1 | 517 | 65 | 584 | 0.0 | 632 |
MS.gene052762.t1 | AT1G62200 | 54.894 | 521 | 221 | 5 | 1 | 515 | 76 | 588 | 0.0 | 583 |
MS.gene052762.t1 | AT1G62200 | 52.182 | 550 | 220 | 7 | 1 | 515 | 90 | 631 | 0.0 | 568 |
MS.gene052762.t1 | AT1G62200 | 52.182 | 550 | 220 | 7 | 1 | 515 | 76 | 617 | 0.0 | 567 |
MS.gene052762.t1 | AT2G02020 | 50.385 | 520 | 214 | 8 | 1 | 516 | 66 | 545 | 1.26e-178 | 513 |
MS.gene052762.t1 | AT1G68570 | 48.659 | 522 | 260 | 5 | 4 | 517 | 20 | 541 | 1.53e-161 | 471 |
MS.gene052762.t1 | AT1G68570 | 48.659 | 522 | 260 | 5 | 4 | 517 | 50 | 571 | 5.94e-161 | 470 |
MS.gene052762.t1 | AT2G02020 | 46.346 | 520 | 214 | 8 | 1 | 516 | 66 | 524 | 4.00e-156 | 455 |
MS.gene052762.t1 | AT5G19640 | 44.168 | 523 | 268 | 8 | 1 | 518 | 83 | 586 | 2.29e-147 | 436 |
MS.gene052762.t1 | AT4G21680 | 44.466 | 524 | 275 | 8 | 4 | 515 | 55 | 574 | 1.07e-143 | 426 |
MS.gene052762.t1 | AT3G54450 | 40.381 | 525 | 290 | 7 | 1 | 517 | 36 | 545 | 2.08e-139 | 414 |
MS.gene052762.t1 | AT1G32450 | 42.692 | 520 | 284 | 7 | 4 | 511 | 64 | 581 | 3.34e-139 | 415 |
MS.gene052762.t1 | AT2G40460 | 41.006 | 517 | 293 | 5 | 1 | 514 | 48 | 555 | 5.91e-139 | 414 |
MS.gene052762.t1 | AT1G12110 | 42.939 | 524 | 286 | 8 | 1 | 515 | 51 | 570 | 1.01e-136 | 408 |
MS.gene052762.t1 | AT2G37900 | 42.775 | 519 | 284 | 7 | 1 | 517 | 62 | 569 | 7.62e-136 | 405 |
MS.gene052762.t1 | AT2G26690 | 44.639 | 513 | 265 | 8 | 1 | 505 | 3 | 504 | 2.17e-135 | 403 |
MS.gene052762.t1 | AT2G26690 | 44.639 | 513 | 265 | 8 | 1 | 505 | 15 | 516 | 2.33e-135 | 403 |
MS.gene052762.t1 | AT2G26690 | 44.639 | 513 | 265 | 8 | 1 | 505 | 48 | 549 | 1.04e-134 | 402 |
MS.gene052762.t1 | AT2G37900 | 43.200 | 500 | 271 | 7 | 20 | 517 | 2 | 490 | 1.62e-134 | 399 |
MS.gene052762.t1 | AT3G53960 | 41.459 | 521 | 296 | 8 | 1 | 517 | 61 | 576 | 4.96e-133 | 399 |
MS.gene052762.t1 | AT5G46050 | 40.883 | 521 | 294 | 6 | 1 | 514 | 51 | 564 | 5.13e-132 | 396 |
MS.gene052762.t1 | AT5G13400 | 40.226 | 532 | 298 | 7 | 1 | 517 | 88 | 614 | 1.09e-130 | 394 |
MS.gene052762.t1 | AT5G46040 | 40.691 | 521 | 295 | 6 | 1 | 514 | 51 | 564 | 1.07e-129 | 390 |
MS.gene052762.t1 | AT1G69870 | 40.613 | 522 | 294 | 10 | 4 | 514 | 78 | 594 | 1.50e-128 | 388 |
MS.gene052762.t1 | AT1G72140 | 38.667 | 525 | 283 | 5 | 1 | 515 | 58 | 553 | 1.63e-126 | 380 |
MS.gene052762.t1 | AT1G72130 | 39.122 | 524 | 276 | 8 | 1 | 517 | 49 | 536 | 2.31e-126 | 380 |
MS.gene052762.t1 | AT1G22540 | 40.805 | 522 | 284 | 7 | 1 | 517 | 54 | 555 | 4.84e-126 | 380 |
MS.gene052762.t1 | AT1G72125 | 41.412 | 524 | 283 | 7 | 1 | 517 | 53 | 559 | 9.43e-125 | 376 |
MS.gene052762.t1 | AT1G59740 | 40.784 | 510 | 287 | 7 | 3 | 505 | 67 | 568 | 5.21e-124 | 375 |
MS.gene052762.t1 | AT3G21670 | 41.556 | 527 | 274 | 9 | 1 | 514 | 53 | 558 | 2.12e-123 | 374 |
MS.gene052762.t1 | AT1G69850 | 39.405 | 538 | 293 | 8 | 2 | 514 | 50 | 579 | 2.59e-123 | 374 |
MS.gene052762.t1 | AT1G27040 | 40.462 | 519 | 292 | 9 | 2 | 513 | 20 | 528 | 2.67e-122 | 369 |
MS.gene052762.t1 | AT1G27040 | 40.462 | 519 | 292 | 9 | 2 | 513 | 52 | 560 | 8.75e-122 | 369 |
MS.gene052762.t1 | AT1G27040 | 40.462 | 519 | 292 | 9 | 2 | 513 | 48 | 556 | 1.03e-121 | 369 |
MS.gene052762.t1 | AT1G72120 | 40.494 | 526 | 285 | 6 | 1 | 519 | 53 | 557 | 3.17e-118 | 359 |
MS.gene052762.t1 | AT1G22550 | 39.474 | 532 | 288 | 10 | 1 | 519 | 54 | 564 | 5.45e-116 | 354 |
MS.gene052762.t1 | AT5G46050 | 40.741 | 459 | 258 | 6 | 63 | 514 | 1 | 452 | 2.35e-114 | 347 |
MS.gene052762.t1 | AT1G22570 | 38.722 | 532 | 293 | 8 | 1 | 519 | 17 | 528 | 2.56e-114 | 348 |
MS.gene052762.t1 | AT1G22570 | 38.722 | 532 | 293 | 8 | 1 | 519 | 54 | 565 | 9.91e-114 | 348 |
MS.gene052762.t1 | AT1G33440 | 39.062 | 512 | 287 | 9 | 4 | 505 | 65 | 561 | 6.98e-112 | 345 |
MS.gene052762.t1 | AT1G52190 | 37.645 | 518 | 302 | 11 | 4 | 505 | 48 | 560 | 8.33e-112 | 345 |
MS.gene052762.t1 | AT1G18880 | 36.226 | 530 | 318 | 11 | 2 | 516 | 44 | 568 | 1.02e-111 | 343 |
MS.gene052762.t1 | AT1G27080 | 36.792 | 530 | 300 | 10 | 1 | 514 | 38 | 548 | 4.64e-111 | 342 |
MS.gene052762.t1 | AT1G27080 | 36.902 | 523 | 295 | 10 | 8 | 514 | 3 | 506 | 1.79e-110 | 339 |
MS.gene052762.t1 | AT5G62730 | 37.079 | 534 | 288 | 9 | 2 | 515 | 22 | 527 | 1.57e-107 | 331 |
MS.gene052762.t1 | AT5G62730 | 37.079 | 534 | 288 | 9 | 2 | 515 | 81 | 586 | 5.18e-107 | 332 |
MS.gene052762.t1 | AT1G72130 | 38.161 | 435 | 232 | 6 | 90 | 517 | 14 | 418 | 8.85e-107 | 325 |
MS.gene052762.t1 | AT1G72130 | 38.161 | 435 | 232 | 6 | 90 | 517 | 14 | 418 | 8.85e-107 | 325 |
MS.gene052762.t1 | AT3G16180 | 37.428 | 521 | 296 | 12 | 4 | 505 | 50 | 559 | 1.03e-105 | 328 |
MS.gene052762.t1 | AT5G14940 | 35.460 | 533 | 297 | 13 | 1 | 511 | 31 | 538 | 1.60e-104 | 324 |
MS.gene052762.t1 | AT5G62680 | 35.674 | 527 | 321 | 10 | 3 | 514 | 69 | 592 | 3.01e-103 | 323 |
MS.gene052762.t1 | AT3G47960 | 35.038 | 528 | 327 | 9 | 3 | 517 | 87 | 611 | 7.48e-100 | 314 |
MS.gene052762.t1 | AT5G28470 | 33.143 | 525 | 334 | 11 | 4 | 518 | 44 | 561 | 2.60e-95 | 300 |
MS.gene052762.t1 | AT3G45660 | 32.375 | 522 | 323 | 9 | 4 | 518 | 48 | 546 | 1.50e-92 | 293 |
MS.gene052762.t1 | AT3G45660 | 32.375 | 522 | 323 | 9 | 4 | 518 | 48 | 546 | 1.50e-92 | 293 |
MS.gene052762.t1 | AT3G45660 | 32.375 | 522 | 323 | 9 | 4 | 518 | 69 | 567 | 1.66e-92 | 293 |
MS.gene052762.t1 | AT5G28470 | 32.952 | 525 | 333 | 12 | 4 | 518 | 44 | 559 | 2.87e-92 | 292 |
MS.gene052762.t1 | AT3G01350 | 33.209 | 536 | 315 | 12 | 1 | 511 | 31 | 548 | 2.92e-91 | 290 |
MS.gene052762.t1 | AT3G45650 | 32.375 | 522 | 321 | 10 | 4 | 517 | 49 | 546 | 4.36e-91 | 289 |
MS.gene052762.t1 | AT1G69860 | 33.908 | 522 | 325 | 9 | 4 | 518 | 45 | 553 | 6.77e-90 | 286 |
MS.gene052762.t1 | AT3G45720 | 31.286 | 521 | 328 | 9 | 4 | 517 | 46 | 543 | 2.23e-89 | 285 |
MS.gene052762.t1 | AT3G45680 | 31.670 | 521 | 327 | 11 | 4 | 517 | 47 | 545 | 9.38e-87 | 278 |
MS.gene052762.t1 | AT3G45650 | 31.022 | 548 | 320 | 11 | 4 | 517 | 49 | 572 | 4.78e-86 | 277 |
MS.gene052762.t1 | AT3G25260 | 31.641 | 512 | 306 | 8 | 2 | 511 | 46 | 515 | 1.84e-83 | 268 |
MS.gene052762.t1 | AT3G25280 | 33.072 | 511 | 302 | 8 | 4 | 511 | 48 | 521 | 1.14e-82 | 266 |
MS.gene052762.t1 | AT3G45710 | 30.019 | 523 | 334 | 10 | 4 | 517 | 48 | 547 | 2.60e-79 | 259 |
MS.gene052762.t1 | AT3G45700 | 30.058 | 519 | 334 | 10 | 4 | 518 | 43 | 536 | 1.11e-78 | 256 |
MS.gene052762.t1 | AT3G45690 | 29.537 | 518 | 301 | 12 | 4 | 517 | 45 | 502 | 8.55e-70 | 232 |
MS.gene052762.t1 | AT2G38100 | 26.408 | 515 | 341 | 11 | 5 | 512 | 2 | 485 | 7.74e-46 | 168 |
MS.gene052762.t1 | AT2G38100 | 26.408 | 515 | 341 | 11 | 5 | 512 | 18 | 501 | 1.13e-45 | 167 |
MS.gene052762.t1 | AT2G38100 | 26.408 | 515 | 341 | 11 | 5 | 512 | 24 | 507 | 1.55e-45 | 167 |
MS.gene052762.t1 | AT5G11570 | 34.940 | 249 | 152 | 4 | 264 | 511 | 237 | 476 | 8.97e-39 | 148 |
MS.gene052762.t1 | AT5G11570 | 37.719 | 228 | 120 | 8 | 4 | 222 | 40 | 254 | 1.11e-35 | 139 |
Find 111 sgRNAs with CRISPR-Local
Find 160 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATTTGTGTGTTTAAGTTTC+CGG | 0.176019 | 4.4:-85771636 | None:intergenic |
GTCGGATGGGGATGGGGTTT+TGG | 0.221483 | 4.4:+85771409 | MS.gene052762:CDS |
ACACTCTAAGTGTCATCTTC+TGG | 0.233776 | 4.4:+85772080 | MS.gene052762:CDS |
TCAAGTAGAGTGCTATAAAA+AGG | 0.238581 | 4.4:-85771210 | None:intergenic |
AAACCGTGTGTTTCATCTTT+TGG | 0.259430 | 4.4:+85771256 | MS.gene052762:CDS |
CAAGTATGCATCAGCTAAAA+AGG | 0.280188 | 4.4:-85770360 | None:intergenic |
TTTCCCTGATTTCAGGTGTT+TGG | 0.304831 | 4.4:+85771811 | MS.gene052762:intron |
AAGTTATTGTTGCAGCATTT+AGG | 0.328500 | 4.4:+85771536 | MS.gene052762:CDS |
CCATCCCTATGTCGATCTTA+TGG | 0.330515 | 4.4:+85772290 | MS.gene052762:CDS |
GACATAGATACTTGAGAAAC+TGG | 0.336849 | 4.4:-85770402 | None:intergenic |
CTCGAAGACCGTTACGGACT+TGG | 0.350415 | 4.4:+85770269 | MS.gene052762:CDS |
TTGCTTCCTCGGTGTTGGTT+TGG | 0.353446 | 4.4:+85771374 | MS.gene052762:CDS |
TGACCCCTATTCATATTATC+TGG | 0.356552 | 4.4:-85772523 | None:intergenic |
GAAGTAAAACCAATTGAAAA+AGG | 0.359554 | 4.4:-85771329 | None:intergenic |
CGTTCGTTTACTCCCCGTTT+GGG | 0.363000 | 4.4:+85771931 | MS.gene052762:CDS |
TACTTGATTGCGCTTGGAAC+TGG | 0.366566 | 4.4:+85771226 | MS.gene052762:CDS |
ACAAAAGTTACTACAAGAAA+TGG | 0.370351 | 4.4:+85772484 | MS.gene052762:CDS |
ACTTGACAAATTCTTGTAAG+AGG | 0.385610 | 4.4:-85771517 | None:intergenic |
CACTCTAAGTGTCATCTTCT+GGG | 0.389839 | 4.4:+85772081 | MS.gene052762:CDS |
TCGTTCGTTTACTCCCCGTT+TGG | 0.403486 | 4.4:+85771930 | MS.gene052762:CDS |
TGATTTCAGGTGTTTGGATA+AGG | 0.407783 | 4.4:+85771817 | MS.gene052762:intron |
TGCAACAGTATACAGTCAAA+TGG | 0.413873 | 4.4:+85771970 | MS.gene052762:CDS |
GGATTCCAGATAATATGAAT+AGG | 0.414072 | 4.4:+85772518 | MS.gene052762:CDS |
TTTCACTTATATCGGTCAAA+TGG | 0.422221 | 4.4:+85772351 | MS.gene052762:CDS |
GTTGCAGCATTTAGGAAACT+TGG | 0.431571 | 4.4:+85771544 | MS.gene052762:CDS |
CGGTGCACTCATTGCTTCCT+CGG | 0.439767 | 4.4:+85771363 | MS.gene052762:CDS |
GATTCCAGATAATATGAATA+GGG | 0.442981 | 4.4:+85772519 | MS.gene052762:CDS |
TAAAGAAGAGACTTATCATC+TGG | 0.447791 | 4.4:-85771577 | None:intergenic |
GGCTATCAGTGATGCCCAAA+CGG | 0.448610 | 4.4:-85771945 | None:intergenic |
ATGAATGTCGGATGGGGATG+GGG | 0.453174 | 4.4:+85771403 | MS.gene052762:CDS |
ACTCATTGCTTCCTCGGTGT+TGG | 0.455639 | 4.4:+85771369 | MS.gene052762:CDS |
CACAAACTTCTCACAGCATC+AGG | 0.456811 | 4.4:-85772394 | None:intergenic |
GTGCAGAGCCTCCATGGATT+CGG | 0.457325 | 4.4:-85771878 | None:intergenic |
GCTATCAGTGATGCCCAAAC+GGG | 0.459760 | 4.4:-85771944 | None:intergenic |
ATGCATACTTGGGAAGATAC+TGG | 0.462100 | 4.4:+85770372 | MS.gene052762:CDS |
GATGAATGTCGGATGGGGAT+GGG | 0.465810 | 4.4:+85771402 | MS.gene052762:CDS |
AAGCCTTCATGTGATACTAA+TGG | 0.469977 | 4.4:+85771157 | MS.gene052762:CDS |
GCTGTGTGAATCCGTGTTCA+TGG | 0.471308 | 4.4:-85772153 | None:intergenic |
CTATGGCATGAGTACAAACT+TGG | 0.471382 | 4.4:+85770238 | None:intergenic |
AACTATCTCGAAGACCGTTA+CGG | 0.475606 | 4.4:+85770263 | MS.gene052762:CDS |
AGATGAATGTCGGATGGGGA+TGG | 0.477086 | 4.4:+85771401 | MS.gene052762:CDS |
GCACTCTACTTGATTGCGCT+TGG | 0.477461 | 4.4:+85771220 | MS.gene052762:CDS |
ACTACAAGAAATGGAAGTCT+TGG | 0.484536 | 4.4:+85772493 | MS.gene052762:CDS |
TTCACACAGCTTCAAAGAAT+CGG | 0.484967 | 4.4:+85772166 | MS.gene052762:CDS |
TGTTACATCACACCATTGCT+TGG | 0.490210 | 4.4:+85770335 | MS.gene052762:CDS |
GGAACCATGTTTGTGTTACA+AGG | 0.495089 | 4.4:+85771992 | MS.gene052762:CDS |
CAAGAAATGGAAGTCTTGGT+TGG | 0.496663 | 4.4:+85772497 | MS.gene052762:CDS |
AAGTGTCATCTTCTGGGTCC+CGG | 0.499628 | 4.4:+85772087 | MS.gene052762:CDS |
TCAAAGAATCGGAATCGGTC+TGG | 0.502170 | 4.4:+85772177 | MS.gene052762:CDS |
CTGCAAATACTGTCACAACT+TGG | 0.505268 | 4.4:+85770303 | MS.gene052762:CDS |
ATCATTTCCACAATCGTGGC+AGG | 0.507388 | 4.4:+85772208 | MS.gene052762:CDS |
GATGTAGAATCTAAAATCAA+AGG | 0.508174 | 4.4:+85771610 | MS.gene052762:CDS |
AATGGCTGCCATCCGACGTC+AGG | 0.509307 | 4.4:+85771175 | MS.gene052762:CDS |
GCAACAGTATACAGTCAAAT+GGG | 0.512639 | 4.4:+85771971 | MS.gene052762:CDS |
GACACTTAGAGTGTCGAAAA+CGG | 0.513721 | 4.4:-85772071 | None:intergenic |
CGGTGAACTTTCTTGCGAAA+GGG | 0.518248 | 4.4:-85772129 | None:intergenic |
AATACTGTCACAACTTGGTC+GGG | 0.519066 | 4.4:+85770308 | MS.gene052762:CDS |
TAGAATACCTGCCACGATTG+TGG | 0.520094 | 4.4:-85772215 | None:intergenic |
TAAAAGATTTACCGAATCCA+TGG | 0.520585 | 4.4:+85771867 | MS.gene052762:CDS |
ACGATGAGACGGTCGTAGAC+CGG | 0.520668 | 4.4:-85772106 | None:intergenic |
GCGGACAATGTCGAGGCGGA+CGG | 0.521632 | 4.4:-85772242 | None:intergenic |
GTTACTGTGCAGAGCCTCCA+TGG | 0.528525 | 4.4:-85771884 | None:intergenic |
CCGGTGAACTTTCTTGCGAA+AGG | 0.533554 | 4.4:-85772130 | None:intergenic |
ATGTAGAATCTAAAATCAAA+GGG | 0.533682 | 4.4:+85771611 | MS.gene052762:CDS |
CGATGAGACGGTCGTAGACC+GGG | 0.534778 | 4.4:-85772105 | None:intergenic |
AAATACTGTCACAACTTGGT+CGG | 0.534850 | 4.4:+85770307 | MS.gene052762:CDS |
CAGTTTGTCCTGACGTCGGA+TGG | 0.535426 | 4.4:-85771183 | None:intergenic |
ACTTGCCATAAGATCGACAT+AGG | 0.537349 | 4.4:-85772295 | None:intergenic |
TGGAGTGCCTGGAGTTGCAA+TGG | 0.539760 | 4.4:+85771429 | MS.gene052762:CDS |
TTGCAGCATTTAGGAAACTT+GGG | 0.546918 | 4.4:+85771545 | MS.gene052762:CDS |
TTGCGAAAGGGACGATGAGA+CGG | 0.547490 | 4.4:-85772117 | None:intergenic |
AATCTAAAATCAAAGGGAGC+CGG | 0.549085 | 4.4:+85771617 | MS.gene052762:CDS |
TGTGAATCCGTGTTCATGGC+CGG | 0.553955 | 4.4:-85772149 | None:intergenic |
GCGATAACCATTGCAACTCC+AGG | 0.558801 | 4.4:-85771436 | None:intergenic |
CAGCTTCAAAGAATCGGAAT+CGG | 0.559892 | 4.4:+85772172 | MS.gene052762:CDS |
AAAACGGAGAGGGAAGCTGA+TGG | 0.567952 | 4.4:-85772055 | None:intergenic |
TCACATGAAGGCTTTAGTCC+AGG | 0.568348 | 4.4:-85771148 | None:intergenic |
CTTTAGTCCAGGTGCAATTG+CGG | 0.570201 | 4.4:-85771137 | None:intergenic |
GGATACAGATGAATGTCGGA+TGG | 0.573725 | 4.4:+85771395 | MS.gene052762:CDS |
TGCCACGATTGTGGAAATGA+TGG | 0.574754 | 4.4:-85772206 | None:intergenic |
CTTGTAAGAGGACTTCCACC+AGG | 0.576288 | 4.4:-85771505 | None:intergenic |
TTGACTGTATACTGTTGCAA+AGG | 0.587730 | 4.4:-85771966 | None:intergenic |
GTTCCGCAGTATTTCCTCGT+AGG | 0.589176 | 4.4:+85772316 | MS.gene052762:CDS |
GATACAGATGAATGTCGGAT+GGG | 0.590289 | 4.4:+85771396 | MS.gene052762:CDS |
TTGATTGCGCTTGGAACTGG+CGG | 0.595031 | 4.4:+85771229 | MS.gene052762:CDS |
CAGTAGAGACAGAATCCGAC+CGG | 0.595827 | 4.4:+85771843 | MS.gene052762:CDS |
TGGTATAGACTTCAAATACC+TGG | 0.596885 | 4.4:+85771487 | MS.gene052762:CDS |
CTCCATCATTTCCACAATCG+TGG | 0.608133 | 4.4:+85772204 | MS.gene052762:CDS |
CCATAAGATCGACATAGGGA+TGG | 0.610175 | 4.4:-85772290 | None:intergenic |
AAGTTCACCGGCCATGAACA+CGG | 0.612897 | 4.4:+85772142 | MS.gene052762:CDS |
CAGCCATTAGTATCACATGA+AGG | 0.621135 | 4.4:-85771160 | None:intergenic |
ACCGATATAAGTGAAAACTT+CGG | 0.623785 | 4.4:-85772344 | None:intergenic |
TAGAGTGTCGAAAACGGAGA+GGG | 0.623960 | 4.4:-85772065 | None:intergenic |
CTGCATTTCCAAGTCCGTAA+CGG | 0.628403 | 4.4:-85770277 | None:intergenic |
ATTCCAGATAATATGAATAG+GGG | 0.635841 | 4.4:+85772520 | MS.gene052762:CDS |
CCTTTCGCAAGAAAGTTCAC+CGG | 0.638836 | 4.4:+85772130 | MS.gene052762:CDS |
GTTTGGATACAGATGAATGT+CGG | 0.639388 | 4.4:+85771391 | MS.gene052762:CDS |
ATACAGATGAATGTCGGATG+GGG | 0.656151 | 4.4:+85771397 | MS.gene052762:CDS |
AACACAATGGATCAACACAT+TGG | 0.661215 | 4.4:+85772016 | MS.gene052762:CDS |
TGTGTTACAAGGCAACACAA+TGG | 0.665398 | 4.4:+85772003 | MS.gene052762:CDS |
CTTGCCATAAGATCGACATA+GGG | 0.668062 | 4.4:-85772294 | None:intergenic |
TATAGACTTCAAATACCTGG+TGG | 0.669427 | 4.4:+85771490 | MS.gene052762:CDS |
GCTGCAGTTTGTCCTGACGT+CGG | 0.674367 | 4.4:-85771187 | None:intergenic |
GTTGCCTTGTAACACAAACA+TGG | 0.693293 | 4.4:-85771996 | None:intergenic |
CTATCAGTGATGCCCAAACG+GGG | 0.694144 | 4.4:-85771943 | None:intergenic |
AAACTTCGGCAGCACCTACG+AGG | 0.701293 | 4.4:-85772330 | None:intergenic |
TTAGAGTGTCGAAAACGGAG+AGG | 0.710645 | 4.4:-85772066 | None:intergenic |
AAGATTTACCGAATCCATGG+AGG | 0.715910 | 4.4:+85771870 | MS.gene052762:CDS |
GCACCAAAAGATGAAACACA+CGG | 0.721405 | 4.4:-85771259 | None:intergenic |
GCACCTACGAGGAAATACTG+CGG | 0.779487 | 4.4:-85772319 | None:intergenic |
CTGTATCCAAACCAACACCG+AGG | 0.799571 | 4.4:-85771380 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CATAAAGATAAATATAAAAA+TGG | - | chr4.4:85771683-85771702 | None:intergenic | 10.0% |
!!! | TTGTTAAAATGTTTTGATAA+AGG | + | chr4.4:85770459-85770478 | MS.gene052762:intron | 15.0% |
!!! | TTTTACTTCTCAATTAATAT+CGG | + | chr4.4:85771343-85771362 | MS.gene052762:CDS | 15.0% |
!! | TCACTTAAAAATATTGCATT+GGG | + | chr4.4:85772427-85772446 | MS.gene052762:CDS | 20.0% |
!! | TTCACTTAAAAATATTGCAT+TGG | + | chr4.4:85772426-85772445 | MS.gene052762:CDS | 20.0% |
!!! | ATGAAGTTTAGAATAAGAAA+AGG | - | chr4.4:85771725-85771744 | None:intergenic | 20.0% |
!!! | ATGTAGAATCTAAAATCAAA+GGG | + | chr4.4:85771611-85771630 | MS.gene052762:CDS | 20.0% |
!!! | TTACTTGAATTTCAAGTAAA+CGG | - | chr4.4:85770686-85770705 | None:intergenic | 20.0% |
! | ACAAAAAAGTGAATCATCTT+AGG | + | chr4.4:85772629-85772648 | MS.gene052762:CDS | 25.0% |
! | ACAAAAGTTACTACAAGAAA+TGG | + | chr4.4:85772484-85772503 | MS.gene052762:CDS | 25.0% |
! | ACATTAACAAGTTAATTGAC+AGG | - | chr4.4:85771071-85771090 | None:intergenic | 25.0% |
! | ACCGATGAAGAAAAATATAA+TGG | - | chr4.4:85771461-85771480 | None:intergenic | 25.0% |
! | ATAGAAGAGAAATTAAAGGA+GGG | - | chr4.4:85770865-85770884 | None:intergenic | 25.0% |
! | ATTCCAGATAATATGAATAG+GGG | + | chr4.4:85772520-85772539 | MS.gene052762:CDS | 25.0% |
! | CGATATAGAAGAGAAATTAA+AGG | - | chr4.4:85770869-85770888 | None:intergenic | 25.0% |
! | GAAGTAAAACCAATTGAAAA+AGG | - | chr4.4:85771332-85771351 | None:intergenic | 25.0% |
! | GATTCCAGATAATATGAATA+GGG | + | chr4.4:85772519-85772538 | MS.gene052762:CDS | 25.0% |
! | TATAGAAGAGAAATTAAAGG+AGG | - | chr4.4:85770866-85770885 | None:intergenic | 25.0% |
!! | GATGTAGAATCTAAAATCAA+AGG | + | chr4.4:85771610-85771629 | MS.gene052762:CDS | 25.0% |
!! | GCCATTATATTTTTCTTCAT+CGG | + | chr4.4:85771457-85771476 | MS.gene052762:CDS | 25.0% |
!!! | GTTTTTGAAGTACATGAAAA+TGG | + | chr4.4:85770929-85770948 | MS.gene052762:intron | 25.0% |
AAACAAATTTCCCTGATTTC+AGG | + | chr4.4:85771804-85771823 | MS.gene052762:intron | 30.0% | |
AAGTTATTGTTGCAGCATTT+AGG | + | chr4.4:85771536-85771555 | MS.gene052762:CDS | 30.0% | |
ACCGATATAAGTGAAAACTT+CGG | - | chr4.4:85772347-85772366 | None:intergenic | 30.0% | |
ACTTGACAAATTCTTGTAAG+AGG | - | chr4.4:85771520-85771539 | None:intergenic | 30.0% | |
AGTTCAAAAGAATACACTGA+TGG | - | chr4.4:85770620-85770639 | None:intergenic | 30.0% | |
AGTTCATATTTAAACGTCTG+AGG | + | chr4.4:85770509-85770528 | MS.gene052762:intron | 30.0% | |
GACAATTCTATTCTACTTTG+AGG | + | chr4.4:85770953-85770972 | MS.gene052762:intron | 30.0% | |
GGATTCCAGATAATATGAAT+AGG | + | chr4.4:85772518-85772537 | MS.gene052762:CDS | 30.0% | |
TAAAAGATTTACCGAATCCA+TGG | + | chr4.4:85771867-85771886 | MS.gene052762:CDS | 30.0% | |
TAAAGAAGAGACTTATCATC+TGG | - | chr4.4:85771580-85771599 | None:intergenic | 30.0% | |
TTTCACTTATATCGGTCAAA+TGG | + | chr4.4:85772351-85772370 | MS.gene052762:CDS | 30.0% | |
! | ATTTCAAGTAAACGGTTCAT+TGG | - | chr4.4:85770678-85770697 | None:intergenic | 30.0% |
! | CAAGTAGAGTGCTATAAAAA+GGG | - | chr4.4:85771212-85771231 | None:intergenic | 30.0% |
! | CATTTGTGTGTTTAAGTTTC+CGG | - | chr4.4:85771639-85771658 | None:intergenic | 30.0% |
! | GCTGATGGAATTTTGAATTT+TGG | - | chr4.4:85772043-85772062 | None:intergenic | 30.0% |
! | TCAAGTAGAGTGCTATAAAA+AGG | - | chr4.4:85771213-85771232 | None:intergenic | 30.0% |
! | TCTCATCGTTTTCATCAAAT+TGG | - | chr4.4:85771288-85771307 | None:intergenic | 30.0% |
!! | GATTCGGTAAATCTTTTATC+CGG | - | chr4.4:85771865-85771884 | None:intergenic | 30.0% |
!! | GTCATCTTGATTACTTTTAC+TGG | + | chr4.4:85772542-85772561 | MS.gene052762:CDS | 30.0% |
!!! | AGAAAAGCTCCTTTTTCAAT+TGG | + | chr4.4:85771320-85771339 | MS.gene052762:CDS | 30.0% |
!!! | GATCATAGTAGTTGTTTTTG+CGG | - | chr4.4:85772264-85772283 | None:intergenic | 30.0% |
!!! | TCTTAGCTCTAGTTTCATTT+TGG | + | chr4.4:85770991-85771010 | MS.gene052762:intron | 30.0% |
!!! | TGATTACTTTTACTGGCTTT+TGG | + | chr4.4:85772549-85772568 | MS.gene052762:CDS | 30.0% |
!!! | TTTTTAGCTGATGCATACTT+GGG | + | chr4.4:85770362-85770381 | MS.gene052762:CDS | 30.0% |
AAATACTGTCACAACTTGGT+CGG | + | chr4.4:85770307-85770326 | MS.gene052762:CDS | 35.0% | |
AACACAATGGATCAACACAT+TGG | + | chr4.4:85772016-85772035 | MS.gene052762:CDS | 35.0% | |
AAGCCTTCATGTGATACTAA+TGG | + | chr4.4:85771157-85771176 | MS.gene052762:CDS | 35.0% | |
ACTACAAGAAATGGAAGTCT+TGG | + | chr4.4:85772493-85772512 | MS.gene052762:CDS | 35.0% | |
CAAGTATGCATCAGCTAAAA+AGG | - | chr4.4:85770363-85770382 | None:intergenic | 35.0% | |
GACATAGATACTTGAGAAAC+TGG | - | chr4.4:85770405-85770424 | None:intergenic | 35.0% | |
GCAACAGTATACAGTCAAAT+GGG | + | chr4.4:85771971-85771990 | MS.gene052762:CDS | 35.0% | |
GTTTGGATACAGATGAATGT+CGG | + | chr4.4:85771391-85771410 | MS.gene052762:CDS | 35.0% | |
TATAGACTTCAAATACCTGG+TGG | + | chr4.4:85771490-85771509 | MS.gene052762:CDS | 35.0% | |
TATCCAAACACCTGAAATCA+GGG | - | chr4.4:85771817-85771836 | None:intergenic | 35.0% | |
TGACCCCTATTCATATTATC+TGG | - | chr4.4:85772526-85772545 | None:intergenic | 35.0% | |
TGCAACAGTATACAGTCAAA+TGG | + | chr4.4:85771970-85771989 | MS.gene052762:CDS | 35.0% | |
TGGTATAGACTTCAAATACC+TGG | + | chr4.4:85771487-85771506 | MS.gene052762:CDS | 35.0% | |
TTATCCAAACACCTGAAATC+AGG | - | chr4.4:85771818-85771837 | None:intergenic | 35.0% | |
TTCACACAGCTTCAAAGAAT+CGG | + | chr4.4:85772166-85772185 | MS.gene052762:CDS | 35.0% | |
TTGACTGTATACTGTTGCAA+AGG | - | chr4.4:85771969-85771988 | None:intergenic | 35.0% | |
TTGCAGCATTTAGGAAACTT+GGG | + | chr4.4:85771545-85771564 | MS.gene052762:CDS | 35.0% | |
! | AAACCGTGTGTTTCATCTTT+TGG | + | chr4.4:85771256-85771275 | MS.gene052762:CDS | 35.0% |
! | AATCTAAAATCAAAGGGAGC+CGG | + | chr4.4:85771617-85771636 | MS.gene052762:CDS | 35.0% |
! | AATGGAGTTCTTTTATGGTC+AGG | + | chr4.4:85772369-85772388 | MS.gene052762:CDS | 35.0% |
! | GCCGAAGTTTTCACTTATAT+CGG | + | chr4.4:85772343-85772362 | MS.gene052762:CDS | 35.0% |
! | GGTCAAATGGAGTTCTTTTA+TGG | + | chr4.4:85772364-85772383 | MS.gene052762:CDS | 35.0% |
! | TGATTTCAGGTGTTTGGATA+AGG | + | chr4.4:85771817-85771836 | MS.gene052762:intron | 35.0% |
!!! | CTTTTTAGCTGATGCATACT+TGG | + | chr4.4:85770361-85770380 | MS.gene052762:CDS | 35.0% |
AACTATCTCGAAGACCGTTA+CGG | + | chr4.4:85770263-85770282 | MS.gene052762:CDS | 40.0% | |
AAGATTTACCGAATCCATGG+AGG | + | chr4.4:85771870-85771889 | MS.gene052762:CDS | 40.0% | |
AATACTGTCACAACTTGGTC+GGG | + | chr4.4:85770308-85770327 | MS.gene052762:CDS | 40.0% | |
ACACTCTAAGTGTCATCTTC+TGG | + | chr4.4:85772080-85772099 | MS.gene052762:CDS | 40.0% | |
ACTTGCCATAAGATCGACAT+AGG | - | chr4.4:85772298-85772317 | None:intergenic | 40.0% | |
ATACAGATGAATGTCGGATG+GGG | + | chr4.4:85771397-85771416 | MS.gene052762:CDS | 40.0% | |
ATGCATACTTGGGAAGATAC+TGG | + | chr4.4:85770372-85770391 | MS.gene052762:CDS | 40.0% | |
CAAGAAATGGAAGTCTTGGT+TGG | + | chr4.4:85772497-85772516 | MS.gene052762:CDS | 40.0% | |
CACTCTAAGTGTCATCTTCT+GGG | + | chr4.4:85772081-85772100 | MS.gene052762:CDS | 40.0% | |
CAGCCATTAGTATCACATGA+AGG | - | chr4.4:85771163-85771182 | None:intergenic | 40.0% | |
CAGCTTCAAAGAATCGGAAT+CGG | + | chr4.4:85772172-85772191 | MS.gene052762:CDS | 40.0% | |
CAGGTCATGAGTTAATTGAC+AGG | - | chr4.4:85771052-85771071 | None:intergenic | 40.0% | |
CGTTGTTTGTGTACTTTCCA+GGG | + | chr4.4:85771094-85771113 | MS.gene052762:intron | 40.0% | |
CTGCAAATACTGTCACAACT+TGG | + | chr4.4:85770303-85770322 | MS.gene052762:CDS | 40.0% | |
CTTGCCATAAGATCGACATA+GGG | - | chr4.4:85772297-85772316 | None:intergenic | 40.0% | |
GATACAGATGAATGTCGGAT+GGG | + | chr4.4:85771396-85771415 | MS.gene052762:CDS | 40.0% | |
GCACCAAAAGATGAAACACA+CGG | - | chr4.4:85771262-85771281 | None:intergenic | 40.0% | |
GGAACCATGTTTGTGTTACA+AGG | + | chr4.4:85771992-85772011 | MS.gene052762:CDS | 40.0% | |
GTTGCAGCATTTAGGAAACT+TGG | + | chr4.4:85771544-85771563 | MS.gene052762:CDS | 40.0% | |
GTTGCCTTGTAACACAAACA+TGG | - | chr4.4:85771999-85772018 | None:intergenic | 40.0% | |
TCGTTGTTTGTGTACTTTCC+AGG | + | chr4.4:85771093-85771112 | MS.gene052762:intron | 40.0% | |
TGTGTTACAAGGCAACACAA+TGG | + | chr4.4:85772003-85772022 | MS.gene052762:CDS | 40.0% | |
TGTTACATCACACCATTGCT+TGG | + | chr4.4:85770335-85770354 | MS.gene052762:CDS | 40.0% | |
TTTGTGTACTTTCCAGGGAA+TGG | + | chr4.4:85771099-85771118 | MS.gene052762:intron | 40.0% | |
! | CGGTAAATCTTTTATCCGGT+CGG | - | chr4.4:85771861-85771880 | None:intergenic | 40.0% |
! | GTCTGAGGTTCATAGTCAAA+AGG | + | chr4.4:85770524-85770543 | MS.gene052762:intron | 40.0% |
! | TTTCCCTGATTTCAGGTGTT+TGG | + | chr4.4:85771811-85771830 | MS.gene052762:intron | 40.0% |
! | TTTTCTTCATCGGTCGTAGA+TGG | + | chr4.4:85771467-85771486 | MS.gene052762:CDS | 40.0% |
!! | ATGTTAAAAGTGCCATTCCC+TGG | - | chr4.4:85771114-85771133 | None:intergenic | 40.0% |
!! | GACACTTAGAGTGTCGAAAA+CGG | - | chr4.4:85772074-85772093 | None:intergenic | 40.0% |
ATCATTTCCACAATCGTGGC+AGG | + | chr4.4:85772208-85772227 | MS.gene052762:CDS | 45.0% | |
CACAAACTTCTCACAGCATC+AGG | - | chr4.4:85772397-85772416 | None:intergenic | 45.0% | |
CCATAAGATCGACATAGGGA+TGG | - | chr4.4:85772293-85772312 | None:intergenic | 45.0% | |
CCATCCCTATGTCGATCTTA+TGG | + | chr4.4:85772290-85772309 | MS.gene052762:CDS | 45.0% | |
CCTTTCGCAAGAAAGTTCAC+CGG | + | chr4.4:85772130-85772149 | MS.gene052762:CDS | 45.0% | |
CGGTGAACTTTCTTGCGAAA+GGG | - | chr4.4:85772132-85772151 | None:intergenic | 45.0% | |
CTCCATCATTTCCACAATCG+TGG | + | chr4.4:85772204-85772223 | MS.gene052762:CDS | 45.0% | |
CTGCATTTCCAAGTCCGTAA+CGG | - | chr4.4:85770280-85770299 | None:intergenic | 45.0% | |
CTTTAGTCCAGGTGCAATTG+CGG | - | chr4.4:85771140-85771159 | None:intergenic | 45.0% | |
GAATTGAACTCTCGACAGAC+AGG | - | chr4.4:85770648-85770667 | None:intergenic | 45.0% | |
GCTAAAAAGGCTCCAAGCAA+TGG | - | chr4.4:85770350-85770369 | None:intergenic | 45.0% | |
GGATACAGATGAATGTCGGA+TGG | + | chr4.4:85771395-85771414 | MS.gene052762:CDS | 45.0% | |
TACTTGATTGCGCTTGGAAC+TGG | + | chr4.4:85771226-85771245 | MS.gene052762:CDS | 45.0% | |
TAGAATACCTGCCACGATTG+TGG | - | chr4.4:85772218-85772237 | None:intergenic | 45.0% | |
TCAAAGAATCGGAATCGGTC+TGG | + | chr4.4:85772177-85772196 | MS.gene052762:CDS | 45.0% | |
TGCCACGATTGTGGAAATGA+TGG | - | chr4.4:85772209-85772228 | None:intergenic | 45.0% | |
! | ACATTTTCCGCAATTGCACC+TGG | + | chr4.4:85771130-85771149 | MS.gene052762:CDS | 45.0% |
! | TCACATGAAGGCTTTAGTCC+AGG | - | chr4.4:85771151-85771170 | None:intergenic | 45.0% |
!! | TAGAGTGTCGAAAACGGAGA+GGG | - | chr4.4:85772068-85772087 | None:intergenic | 45.0% |
!! | TGTTTTTGCGGACAATGTCG+AGG | - | chr4.4:85772252-85772271 | None:intergenic | 45.0% |
!! | TTAGAGTGTCGAAAACGGAG+AGG | - | chr4.4:85772069-85772088 | None:intergenic | 45.0% |
AAAACGGAGAGGGAAGCTGA+TGG | - | chr4.4:85772058-85772077 | None:intergenic | 50.0% | |
AAGTGTCATCTTCTGGGTCC+CGG | + | chr4.4:85772087-85772106 | MS.gene052762:CDS | 50.0% | |
AAGTTCACCGGCCATGAACA+CGG | + | chr4.4:85772142-85772161 | MS.gene052762:CDS | 50.0% | |
AGATGAATGTCGGATGGGGA+TGG | + | chr4.4:85771401-85771420 | MS.gene052762:CDS | 50.0% | |
ATGAATGTCGGATGGGGATG+GGG | + | chr4.4:85771403-85771422 | MS.gene052762:CDS | 50.0% | |
CAGTAGAGACAGAATCCGAC+CGG | + | chr4.4:85771843-85771862 | MS.gene052762:CDS | 50.0% | |
CCGGTGAACTTTCTTGCGAA+AGG | - | chr4.4:85772133-85772152 | None:intergenic | 50.0% | |
CGTTCGTTTACTCCCCGTTT+GGG | + | chr4.4:85771931-85771950 | MS.gene052762:CDS | 50.0% | |
CTATCAGTGATGCCCAAACG+GGG | - | chr4.4:85771946-85771965 | None:intergenic | 50.0% | |
CTGTATCCAAACCAACACCG+AGG | - | chr4.4:85771383-85771402 | None:intergenic | 50.0% | |
CTTGTAAGAGGACTTCCACC+AGG | - | chr4.4:85771508-85771527 | None:intergenic | 50.0% | |
GATGAATGTCGGATGGGGAT+GGG | + | chr4.4:85771402-85771421 | MS.gene052762:CDS | 50.0% | |
GCACCTACGAGGAAATACTG+CGG | - | chr4.4:85772322-85772341 | None:intergenic | 50.0% | |
GCACTCTACTTGATTGCGCT+TGG | + | chr4.4:85771220-85771239 | MS.gene052762:CDS | 50.0% | |
GCGATAACCATTGCAACTCC+AGG | - | chr4.4:85771439-85771458 | None:intergenic | 50.0% | |
GCTATCAGTGATGCCCAAAC+GGG | - | chr4.4:85771947-85771966 | None:intergenic | 50.0% | |
GCTGTGTGAATCCGTGTTCA+TGG | - | chr4.4:85772156-85772175 | None:intergenic | 50.0% | |
GGCTATCAGTGATGCCCAAA+CGG | - | chr4.4:85771948-85771967 | None:intergenic | 50.0% | |
GTTCCGCAGTATTTCCTCGT+AGG | + | chr4.4:85772316-85772335 | MS.gene052762:CDS | 50.0% | |
TCGTTCGTTTACTCCCCGTT+TGG | + | chr4.4:85771930-85771949 | MS.gene052762:CDS | 50.0% | |
TGTGAATCCGTGTTCATGGC+CGG | - | chr4.4:85772152-85772171 | None:intergenic | 50.0% | |
TTGATTGCGCTTGGAACTGG+CGG | + | chr4.4:85771229-85771248 | MS.gene052762:CDS | 50.0% | |
TTGCGAAAGGGACGATGAGA+CGG | - | chr4.4:85772120-85772139 | None:intergenic | 50.0% | |
! | ACTCATTGCTTCCTCGGTGT+TGG | + | chr4.4:85771369-85771388 | MS.gene052762:CDS | 50.0% |
! | TTTTGCGGACAATGTCGAGG+CGG | - | chr4.4:85772249-85772268 | None:intergenic | 50.0% |
!! | TTGCTTCCTCGGTGTTGGTT+TGG | + | chr4.4:85771374-85771393 | MS.gene052762:CDS | 50.0% |
AAACTTCGGCAGCACCTACG+AGG | - | chr4.4:85772333-85772352 | None:intergenic | 55.0% | |
ACGATGAGACGGTCGTAGAC+CGG | - | chr4.4:85772109-85772128 | None:intergenic | 55.0% | |
CAGTTTGTCCTGACGTCGGA+TGG | - | chr4.4:85771186-85771205 | None:intergenic | 55.0% | |
CGGTGCACTCATTGCTTCCT+CGG | + | chr4.4:85771363-85771382 | MS.gene052762:CDS | 55.0% | |
CTCGAAGACCGTTACGGACT+TGG | + | chr4.4:85770269-85770288 | MS.gene052762:CDS | 55.0% | |
GCTGCAGTTTGTCCTGACGT+CGG | - | chr4.4:85771190-85771209 | None:intergenic | 55.0% | |
GTGCAGAGCCTCCATGGATT+CGG | - | chr4.4:85771881-85771900 | None:intergenic | 55.0% | |
GTTACTGTGCAGAGCCTCCA+TGG | - | chr4.4:85771887-85771906 | None:intergenic | 55.0% | |
! | TGGAGTGCCTGGAGTTGCAA+TGG | + | chr4.4:85771429-85771448 | MS.gene052762:CDS | 55.0% |
AATGGCTGCCATCCGACGTC+AGG | + | chr4.4:85771175-85771194 | MS.gene052762:CDS | 60.0% | |
CGATGAGACGGTCGTAGACC+GGG | - | chr4.4:85772108-85772127 | None:intergenic | 60.0% | |
! | GTCGGATGGGGATGGGGTTT+TGG | + | chr4.4:85771409-85771428 | MS.gene052762:CDS | 60.0% |
!!! | GGATGGGGTTTTGGAGTGCC+TGG | + | chr4.4:85771418-85771437 | MS.gene052762:CDS | 60.0% |
GCGGACAATGTCGAGGCGGA+CGG | - | chr4.4:85772245-85772264 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 85770245 | 85772654 | 85770245 | ID=MS.gene052762 |
chr4.4 | mRNA | 85770245 | 85772654 | 85770245 | ID=MS.gene052762.t1;Parent=MS.gene052762 |
chr4.4 | exon | 85770245 | 85770427 | 85770245 | ID=MS.gene052762.t1.exon1;Parent=MS.gene052762.t1 |
chr4.4 | CDS | 85770245 | 85770427 | 85770245 | ID=cds.MS.gene052762.t1;Parent=MS.gene052762.t1 |
chr4.4 | exon | 85771115 | 85771665 | 85771115 | ID=MS.gene052762.t1.exon2;Parent=MS.gene052762.t1 |
chr4.4 | CDS | 85771115 | 85771665 | 85771115 | ID=cds.MS.gene052762.t1;Parent=MS.gene052762.t1 |
chr4.4 | exon | 85771826 | 85772654 | 85771826 | ID=MS.gene052762.t1.exon3;Parent=MS.gene052762.t1 |
chr4.4 | CDS | 85771826 | 85772654 | 85771826 | ID=cds.MS.gene052762.t1;Parent=MS.gene052762.t1 |
Gene Sequence |
Protein sequence |