Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39679.t1 | GAU20271.1 | 47.4 | 325 | 22 | 1 | 1 | 176 | 1 | 325 | 9.40E-67 | 263.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39679.t1 | Q9LTH7 | 54.0 | 113 | 47 | 2 | 17 | 125 | 14 | 125 | 3.3e-28 | 126.3 |
| MS.gene39679.t1 | Q9LTH7 | 50.0 | 52 | 26 | 0 | 125 | 176 | 315 | 366 | 2.6e-09 | 63.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39679.t1 | G7LCM0 | 44.2 | 364 | 15 | 1 | 1 | 176 | 1 | 364 | 2.9e-65 | 257.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene39679 | 0.8059 | 1.07E-49 | -1.69E-46 |
| MS.gene049153 | MS.gene39679 | 0.812154 | 4.89E-51 | -1.69E-46 |
| MS.gene049346 | MS.gene39679 | 0.84442 | 7.64E-59 | -1.69E-46 |
| MS.gene049356 | MS.gene39679 | 0.806471 | 8.10E-50 | -1.69E-46 |
| MS.gene049661 | MS.gene39679 | 0.812327 | 4.48E-51 | -1.69E-46 |
| MS.gene049662 | MS.gene39679 | 0.812416 | 4.29E-51 | -1.69E-46 |
| MS.gene049758 | MS.gene39679 | 0.820221 | 7.69E-53 | -1.69E-46 |
| MS.gene049910 | MS.gene39679 | 0.830189 | 3.38E-55 | -1.69E-46 |
| MS.gene050060 | MS.gene39679 | 0.823928 | 1.06E-53 | -1.69E-46 |
| MS.gene050128 | MS.gene39679 | 0.824265 | 8.86E-54 | -1.69E-46 |
| MS.gene050301 | MS.gene39679 | 0.854965 | 8.66E-62 | -1.69E-46 |
| MS.gene050397 | MS.gene39679 | 0.818853 | 1.58E-52 | -1.69E-46 |
| MS.gene050404 | MS.gene39679 | 0.837906 | 3.94E-57 | -1.69E-46 |
| MS.gene050406 | MS.gene39679 | 0.884749 | 1.47E-71 | -1.69E-46 |
| MS.gene050426 | MS.gene39679 | -0.811147 | 8.09E-51 | -1.69E-46 |
| MS.gene050464 | MS.gene39679 | 0.826458 | 2.68E-54 | -1.69E-46 |
| MS.gene050529 | MS.gene39679 | 0.833133 | 6.35E-56 | -1.69E-46 |
| MS.gene050670 | MS.gene39679 | 0.840211 | 9.97E-58 | -1.69E-46 |
| MS.gene050812 | MS.gene39679 | 0.819085 | 1.40E-52 | -1.69E-46 |
| MS.gene05101 | MS.gene39679 | 0.800192 | 1.62E-48 | -1.69E-46 |
| MS.gene05105 | MS.gene39679 | 0.81138 | 7.21E-51 | -1.69E-46 |
| MS.gene051471 | MS.gene39679 | 0.831625 | 1.50E-55 | -1.69E-46 |
| MS.gene051525 | MS.gene39679 | 0.820271 | 7.49E-53 | -1.69E-46 |
| MS.gene051582 | MS.gene39679 | 0.844773 | 6.14E-59 | -1.69E-46 |
| MS.gene051860 | MS.gene39679 | 0.801536 | 8.60E-49 | -1.69E-46 |
| MS.gene051983 | MS.gene39679 | 0.821842 | 3.26E-53 | -1.69E-46 |
| MS.gene052011 | MS.gene39679 | -0.819353 | 1.21E-52 | -1.69E-46 |
| MS.gene052077 | MS.gene39679 | 0.841395 | 4.88E-58 | -1.69E-46 |
| MS.gene052134 | MS.gene39679 | 0.808608 | 2.85E-50 | -1.69E-46 |
| MS.gene052135 | MS.gene39679 | 0.825479 | 4.58E-54 | -1.69E-46 |
| MS.gene052178 | MS.gene39679 | 0.808804 | 2.59E-50 | -1.69E-46 |
| MS.gene052188 | MS.gene39679 | 0.85817 | 9.90E-63 | -1.69E-46 |
| MS.gene052253 | MS.gene39679 | 0.861096 | 1.30E-63 | -1.69E-46 |
| MS.gene052310 | MS.gene39679 | 0.851326 | 9.55E-61 | -1.69E-46 |
| MS.gene052340 | MS.gene39679 | 0.888403 | 6.09E-73 | -1.69E-46 |
| MS.gene052421 | MS.gene39679 | 0.808038 | 3.77E-50 | -1.69E-46 |
| MS.gene052485 | MS.gene39679 | 0.810679 | 1.02E-50 | -1.69E-46 |
| MS.gene052758 | MS.gene39679 | 0.800253 | 1.57E-48 | -1.69E-46 |
| MS.gene052762 | MS.gene39679 | 0.807721 | 4.40E-50 | -1.69E-46 |
| MS.gene053073 | MS.gene39679 | 0.846822 | 1.71E-59 | -1.69E-46 |
| MS.gene05316 | MS.gene39679 | 0.818049 | 2.40E-52 | -1.69E-46 |
| MS.gene053330 | MS.gene39679 | 0.813428 | 2.57E-51 | -1.69E-46 |
| MS.gene053557 | MS.gene39679 | 0.865846 | 4.39E-65 | -1.69E-46 |
| MS.gene053836 | MS.gene39679 | 0.846345 | 2.30E-59 | -1.69E-46 |
| MS.gene053928 | MS.gene39679 | 0.863869 | 1.83E-64 | -1.69E-46 |
| MS.gene054102 | MS.gene39679 | 0.805196 | 1.50E-49 | -1.69E-46 |
| MS.gene054123 | MS.gene39679 | 0.866064 | 3.74E-65 | -1.69E-46 |
| MS.gene05412 | MS.gene39679 | 0.800715 | 1.27E-48 | -1.69E-46 |
| MS.gene05413 | MS.gene39679 | 0.803223 | 3.86E-49 | -1.69E-46 |
| MS.gene054183 | MS.gene39679 | 0.827052 | 1.94E-54 | -1.69E-46 |
| MS.gene054349 | MS.gene39679 | 0.846157 | 2.59E-59 | -1.69E-46 |
| MS.gene054918 | MS.gene39679 | 0.8069 | 6.57E-50 | -1.69E-46 |
| MS.gene054930 | MS.gene39679 | 0.818875 | 1.56E-52 | -1.69E-46 |
| MS.gene054983 | MS.gene39679 | 0.813468 | 2.52E-51 | -1.69E-46 |
| MS.gene055116 | MS.gene39679 | 0.875148 | 3.87E-68 | -1.69E-46 |
| MS.gene055369 | MS.gene39679 | 0.812614 | 3.88E-51 | -1.69E-46 |
| MS.gene055422 | MS.gene39679 | 0.815579 | 8.60E-52 | -1.69E-46 |
| MS.gene055428 | MS.gene39679 | 0.806885 | 6.62E-50 | -1.69E-46 |
| MS.gene055539 | MS.gene39679 | 0.811128 | 8.17E-51 | -1.69E-46 |
| MS.gene05553 | MS.gene39679 | 0.881067 | 3.27E-70 | -1.69E-46 |
| MS.gene056191 | MS.gene39679 | 0.808315 | 3.29E-50 | -1.69E-46 |
| MS.gene056233 | MS.gene39679 | 0.819084 | 1.40E-52 | -1.69E-46 |
| MS.gene056407 | MS.gene39679 | 0.850938 | 1.23E-60 | -1.69E-46 |
| MS.gene056451 | MS.gene39679 | 0.805899 | 1.07E-49 | -1.69E-46 |
| MS.gene056609 | MS.gene39679 | 0.802212 | 6.25E-49 | -1.69E-46 |
| MS.gene056612 | MS.gene39679 | 0.844742 | 6.26E-59 | -1.69E-46 |
| MS.gene056659 | MS.gene39679 | 0.854044 | 1.60E-61 | -1.69E-46 |
| MS.gene056719 | MS.gene39679 | 0.803913 | 2.78E-49 | -1.69E-46 |
| MS.gene056723 | MS.gene39679 | 0.839588 | 1.45E-57 | -1.69E-46 |
| MS.gene056899 | MS.gene39679 | -0.819253 | 1.28E-52 | -1.69E-46 |
| MS.gene056979 | MS.gene39679 | 0.813681 | 2.26E-51 | -1.69E-46 |
| MS.gene05702 | MS.gene39679 | 0.87156 | 6.23E-67 | -1.69E-46 |
| MS.gene057124 | MS.gene39679 | 0.820873 | 5.45E-53 | -1.69E-46 |
| MS.gene057396 | MS.gene39679 | 0.883878 | 3.09E-71 | -1.69E-46 |
| MS.gene057448 | MS.gene39679 | 0.840698 | 7.43E-58 | -1.69E-46 |
| MS.gene057449 | MS.gene39679 | 0.825017 | 5.90E-54 | -1.69E-46 |
| MS.gene057450 | MS.gene39679 | 0.845799 | 3.24E-59 | -1.69E-46 |
| MS.gene057749 | MS.gene39679 | 0.813478 | 2.51E-51 | -1.69E-46 |
| MS.gene057754 | MS.gene39679 | 0.800579 | 1.35E-48 | -1.69E-46 |
| MS.gene057823 | MS.gene39679 | 0.809063 | 2.28E-50 | -1.69E-46 |
| MS.gene057825 | MS.gene39679 | 0.822586 | 2.19E-53 | -1.69E-46 |
| MS.gene058002 | MS.gene39679 | 0.852675 | 3.95E-61 | -1.69E-46 |
| MS.gene058007 | MS.gene39679 | 0.822868 | 1.88E-53 | -1.69E-46 |
| MS.gene05811 | MS.gene39679 | 0.815261 | 1.01E-51 | -1.69E-46 |
| MS.gene058142 | MS.gene39679 | 0.856661 | 2.77E-62 | -1.69E-46 |
| MS.gene058233 | MS.gene39679 | 0.818238 | 2.18E-52 | -1.69E-46 |
| MS.gene058276 | MS.gene39679 | 0.843099 | 1.73E-58 | -1.69E-46 |
| MS.gene058293 | MS.gene39679 | 0.816671 | 4.90E-52 | -1.69E-46 |
| MS.gene058365 | MS.gene39679 | 0.820904 | 5.36E-53 | -1.69E-46 |
| MS.gene058371 | MS.gene39679 | 0.800268 | 1.56E-48 | -1.69E-46 |
| MS.gene058660 | MS.gene39679 | 0.803869 | 2.84E-49 | -1.69E-46 |
| MS.gene058700 | MS.gene39679 | 0.814971 | 1.17E-51 | -1.69E-46 |
| MS.gene05886 | MS.gene39679 | 0.808979 | 2.37E-50 | -1.69E-46 |
| MS.gene058928 | MS.gene39679 | 0.826811 | 2.21E-54 | -1.69E-46 |
| MS.gene058949 | MS.gene39679 | 0.823598 | 1.27E-53 | -1.69E-46 |
| MS.gene059011 | MS.gene39679 | 0.843484 | 1.36E-58 | -1.69E-46 |
| MS.gene05907 | MS.gene39679 | 0.847766 | 9.40E-60 | -1.69E-46 |
| MS.gene059082 | MS.gene39679 | 0.813354 | 2.67E-51 | -1.69E-46 |
| MS.gene059141 | MS.gene39679 | 0.800633 | 1.32E-48 | -1.69E-46 |
| MS.gene059285 | MS.gene39679 | 0.825518 | 4.49E-54 | -1.69E-46 |
| MS.gene059420 | MS.gene39679 | 0.839301 | 1.72E-57 | -1.69E-46 |
| MS.gene059462 | MS.gene39679 | 0.830138 | 3.48E-55 | -1.69E-46 |
| MS.gene059597 | MS.gene39679 | 0.837912 | 3.93E-57 | -1.69E-46 |
| MS.gene05959 | MS.gene39679 | 0.806265 | 8.95E-50 | -1.69E-46 |
| MS.gene059676 | MS.gene39679 | 0.811064 | 8.44E-51 | -1.69E-46 |
| MS.gene059688 | MS.gene39679 | 0.853453 | 2.37E-61 | -1.69E-46 |
| MS.gene059692 | MS.gene39679 | 0.86019 | 2.45E-63 | -1.69E-46 |
| MS.gene059695 | MS.gene39679 | 0.860515 | 1.96E-63 | -1.69E-46 |
| MS.gene059807 | MS.gene39679 | 0.820372 | 7.10E-53 | -1.69E-46 |
| MS.gene05984 | MS.gene39679 | 0.808936 | 2.42E-50 | -1.69E-46 |
| MS.gene059894 | MS.gene39679 | 0.872418 | 3.23E-67 | -1.69E-46 |
| MS.gene060247 | MS.gene39679 | 0.82956 | 4.81E-55 | -1.69E-46 |
| MS.gene06037 | MS.gene39679 | 0.819432 | 1.16E-52 | -1.69E-46 |
| MS.gene060403 | MS.gene39679 | 0.824826 | 6.54E-54 | -1.69E-46 |
| MS.gene060407 | MS.gene39679 | 0.854923 | 8.91E-62 | -1.69E-46 |
| MS.gene060495 | MS.gene39679 | 0.82017 | 7.90E-53 | -1.69E-46 |
| MS.gene061049 | MS.gene39679 | 0.893182 | 7.98E-75 | -1.69E-46 |
| MS.gene061051 | MS.gene39679 | -0.842846 | 2.01E-58 | -1.69E-46 |
| MS.gene061112 | MS.gene39679 | 0.813589 | 2.37E-51 | -1.69E-46 |
| MS.gene061154 | MS.gene39679 | 0.825928 | 3.59E-54 | -1.69E-46 |
| MS.gene061159 | MS.gene39679 | 0.877479 | 6.08E-69 | -1.69E-46 |
| MS.gene061265 | MS.gene39679 | 0.816916 | 4.32E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39679.t1 | MTR_8g009160 | 89.683 | 126 | 13 | 0 | 1 | 126 | 1 | 126 | 4.19e-79 | 239 |
| MS.gene39679.t1 | MTR_8g009160 | 94.231 | 52 | 3 | 0 | 125 | 176 | 313 | 364 | 4.19e-26 | 102 |
| MS.gene39679.t1 | MTR_8g009170 | 90.476 | 126 | 12 | 0 | 1 | 126 | 1 | 126 | 1.22e-78 | 236 |
| MS.gene39679.t1 | MTR_8g009170 | 90.476 | 126 | 12 | 0 | 1 | 126 | 1 | 126 | 5.28e-78 | 237 |
| MS.gene39679.t1 | MTR_8g009170 | 90.385 | 52 | 4 | 1 | 126 | 176 | 315 | 366 | 1.12e-23 | 95.9 |
| MS.gene39679.t1 | MTR_8g009110 | 88.889 | 126 | 14 | 0 | 1 | 126 | 1 | 126 | 2.20e-77 | 235 |
| MS.gene39679.t1 | MTR_8g009110 | 80.392 | 51 | 10 | 0 | 126 | 176 | 315 | 365 | 1.10e-21 | 90.5 |
| MS.gene39679.t1 | MTR_8g008930 | 90.323 | 124 | 12 | 0 | 1 | 124 | 1 | 124 | 1.05e-76 | 233 |
| MS.gene39679.t1 | MTR_8g008930 | 82.353 | 51 | 9 | 0 | 126 | 176 | 315 | 365 | 2.66e-21 | 89.4 |
| MS.gene39679.t1 | MTR_8g009090 | 89.516 | 124 | 13 | 0 | 1 | 124 | 1 | 124 | 4.98e-76 | 231 |
| MS.gene39679.t1 | MTR_8g009090 | 82.353 | 51 | 9 | 0 | 126 | 176 | 314 | 364 | 4.30e-22 | 91.7 |
| MS.gene39679.t1 | MTR_8g028435 | 87.302 | 126 | 16 | 0 | 1 | 126 | 1 | 126 | 1.46e-75 | 230 |
| MS.gene39679.t1 | MTR_8g028435 | 86.000 | 50 | 7 | 0 | 127 | 176 | 315 | 364 | 4.71e-22 | 91.3 |
| MS.gene39679.t1 | MTR_8g009120 | 84.677 | 124 | 19 | 0 | 1 | 124 | 1 | 124 | 3.64e-71 | 219 |
| MS.gene39679.t1 | MTR_8g009120 | 81.633 | 49 | 9 | 0 | 128 | 176 | 305 | 353 | 2.52e-20 | 86.7 |
| MS.gene39679.t1 | MTR_8g009150 | 83.871 | 124 | 20 | 0 | 1 | 124 | 1 | 124 | 4.19e-71 | 218 |
| MS.gene39679.t1 | MTR_8g009150 | 82.000 | 50 | 9 | 0 | 127 | 176 | 296 | 345 | 1.90e-21 | 89.7 |
| MS.gene39679.t1 | MTR_4g117880 | 75.397 | 126 | 31 | 0 | 1 | 126 | 1 | 126 | 1.25e-65 | 205 |
| MS.gene39679.t1 | MTR_4g117880 | 66.667 | 51 | 16 | 1 | 127 | 176 | 316 | 366 | 7.44e-14 | 68.6 |
| MS.gene39679.t1 | MTR_2g069090 | 69.565 | 115 | 31 | 2 | 15 | 126 | 20 | 133 | 5.63e-49 | 162 |
| MS.gene39679.t1 | MTR_2g069090 | 62.963 | 54 | 20 | 0 | 123 | 176 | 319 | 372 | 5.41e-17 | 77.4 |
| MS.gene39679.t1 | MTR_2g069210 | 63.281 | 128 | 42 | 3 | 2 | 126 | 4 | 129 | 1.32e-46 | 156 |
| MS.gene39679.t1 | MTR_2g069210 | 70.000 | 50 | 15 | 0 | 127 | 176 | 318 | 367 | 1.08e-18 | 82.0 |
| MS.gene39679.t1 | MTR_2g069190 | 63.478 | 115 | 38 | 2 | 15 | 126 | 20 | 133 | 1.26e-44 | 151 |
| MS.gene39679.t1 | MTR_2g069190 | 70.370 | 54 | 16 | 0 | 123 | 176 | 318 | 371 | 1.46e-19 | 84.7 |
| MS.gene39679.t1 | MTR_2g069300 | 53.521 | 142 | 58 | 3 | 15 | 153 | 6 | 142 | 1.30e-43 | 148 |
| MS.gene39679.t1 | MTR_2g069300 | 61.364 | 44 | 17 | 0 | 133 | 176 | 315 | 358 | 4.90e-15 | 72.0 |
| MS.gene39679.t1 | MTR_1g043770 | 59.813 | 107 | 41 | 2 | 19 | 124 | 11 | 116 | 8.29e-39 | 134 |
| MS.gene39679.t1 | MTR_1g043770 | 59.813 | 107 | 41 | 2 | 19 | 124 | 11 | 116 | 1.29e-38 | 135 |
| MS.gene39679.t1 | MTR_1g043770 | 33.628 | 113 | 66 | 3 | 66 | 176 | 250 | 355 | 4.22e-14 | 69.3 |
| MS.gene39679.t1 | MTR_1g043775 | 48.611 | 144 | 68 | 3 | 17 | 155 | 9 | 151 | 2.34e-37 | 130 |
| MS.gene39679.t1 | MTR_1g043760 | 59.091 | 110 | 42 | 2 | 17 | 124 | 9 | 117 | 3.56e-37 | 131 |
| MS.gene39679.t1 | MTR_1g043775 | 48.611 | 144 | 68 | 3 | 17 | 155 | 9 | 151 | 6.98e-37 | 130 |
| MS.gene39679.t1 | MTR_1g044105 | 53.913 | 115 | 45 | 2 | 17 | 124 | 9 | 122 | 1.24e-36 | 125 |
| MS.gene39679.t1 | MTR_8g009080 | 53.521 | 142 | 57 | 5 | 6 | 144 | 38 | 173 | 3.40e-36 | 128 |
| MS.gene39679.t1 | MTR_8g009080 | 53.521 | 142 | 57 | 5 | 6 | 144 | 38 | 173 | 5.17e-36 | 128 |
| MS.gene39679.t1 | MTR_8g009080 | 53.521 | 142 | 57 | 5 | 6 | 144 | 38 | 173 | 1.08e-35 | 128 |
| MS.gene39679.t1 | MTR_8g009080 | 65.385 | 52 | 18 | 0 | 125 | 176 | 346 | 397 | 7.01e-17 | 77.4 |
| MS.gene39679.t1 | MTR_1g043810 | 45.139 | 144 | 73 | 3 | 17 | 155 | 9 | 151 | 1.56e-34 | 124 |
| MS.gene39679.t1 | MTR_1g043810 | 45.139 | 144 | 73 | 3 | 17 | 155 | 9 | 151 | 2.71e-34 | 124 |
| MS.gene39679.t1 | MTR_1g093140 | 45.255 | 137 | 56 | 5 | 4 | 124 | 3 | 136 | 9.45e-32 | 117 |
| MS.gene39679.t1 | MTR_7g078010 | 50.000 | 110 | 52 | 2 | 17 | 124 | 22 | 130 | 4.49e-31 | 114 |
| MS.gene39679.t1 | MTR_7g078010 | 50.000 | 110 | 52 | 2 | 17 | 124 | 22 | 130 | 1.91e-30 | 114 |
| MS.gene39679.t1 | MTR_8g063070 | 45.902 | 122 | 60 | 4 | 10 | 126 | 12 | 132 | 2.33e-30 | 114 |
| MS.gene39679.t1 | MTR_4g024660 | 48.305 | 118 | 55 | 3 | 12 | 124 | 14 | 130 | 3.15e-30 | 113 |
| MS.gene39679.t1 | MTR_4g024660 | 54.000 | 50 | 23 | 0 | 127 | 176 | 324 | 373 | 1.17e-11 | 62.4 |
| MS.gene39679.t1 | MTR_8g006930 | 42.958 | 142 | 71 | 4 | 17 | 151 | 22 | 160 | 3.46e-30 | 113 |
| MS.gene39679.t1 | MTR_8g006930 | 32.432 | 111 | 59 | 3 | 73 | 176 | 272 | 373 | 2.58e-12 | 64.3 |
| MS.gene39679.t1 | MTR_1g093120 | 46.087 | 115 | 53 | 4 | 17 | 124 | 18 | 130 | 5.13e-30 | 112 |
| MS.gene39679.t1 | MTR_2g068950 | 39.645 | 169 | 88 | 5 | 1 | 162 | 1 | 162 | 9.15e-30 | 112 |
| MS.gene39679.t1 | MTR_8g062600 | 46.457 | 127 | 52 | 4 | 10 | 126 | 12 | 132 | 1.11e-29 | 112 |
| MS.gene39679.t1 | MTR_8g062600 | 52.000 | 50 | 24 | 0 | 127 | 176 | 324 | 373 | 3.95e-12 | 63.5 |
| MS.gene39679.t1 | MTR_7g056347 | 48.214 | 112 | 55 | 3 | 15 | 124 | 20 | 130 | 1.47e-29 | 111 |
| MS.gene39679.t1 | MTR_7g056347 | 46.296 | 54 | 29 | 0 | 123 | 176 | 320 | 373 | 8.18e-13 | 65.9 |
| MS.gene39679.t1 | MTR_8g041600 | 53.509 | 114 | 45 | 3 | 17 | 124 | 22 | 133 | 1.90e-29 | 110 |
| MS.gene39679.t1 | MTR_4g119410 | 47.458 | 118 | 56 | 4 | 12 | 124 | 14 | 130 | 3.69e-29 | 110 |
| MS.gene39679.t1 | MTR_4g119410 | 54.348 | 46 | 21 | 0 | 131 | 176 | 328 | 373 | 4.39e-12 | 63.5 |
| MS.gene39679.t1 | MTR_4g099380 | 48.649 | 111 | 45 | 3 | 19 | 124 | 129 | 232 | 5.26e-29 | 108 |
| MS.gene39679.t1 | MTR_8g041600 | 53.509 | 114 | 45 | 3 | 17 | 124 | 22 | 133 | 6.77e-29 | 110 |
| MS.gene39679.t1 | MTR_8g041600 | 58.696 | 46 | 19 | 0 | 131 | 176 | 329 | 374 | 3.31e-12 | 63.9 |
| MS.gene39679.t1 | MTR_2g068960 | 41.420 | 169 | 85 | 6 | 1 | 162 | 1 | 162 | 1.09e-28 | 109 |
| MS.gene39679.t1 | MTR_8g041620 | 53.509 | 114 | 45 | 3 | 17 | 124 | 22 | 133 | 1.45e-28 | 109 |
| MS.gene39679.t1 | MTR_8g041620 | 58.696 | 46 | 19 | 0 | 131 | 176 | 329 | 374 | 1.84e-11 | 61.6 |
| MS.gene39679.t1 | MTR_1g093110 | 45.299 | 117 | 53 | 4 | 17 | 124 | 19 | 133 | 5.13e-27 | 105 |
| MS.gene39679.t1 | MTR_1g093110 | 33.019 | 106 | 63 | 2 | 73 | 176 | 275 | 374 | 2.88e-11 | 61.2 |
| MS.gene39679.t1 | MTR_7g029655 | 43.966 | 116 | 54 | 2 | 15 | 123 | 15 | 126 | 1.00e-24 | 99.0 |
| MS.gene39679.t1 | MTR_7g029655 | 56.250 | 48 | 21 | 0 | 129 | 176 | 323 | 370 | 7.93e-13 | 65.9 |
| MS.gene39679.t1 | MTR_2g069020 | 42.478 | 113 | 60 | 2 | 16 | 124 | 19 | 130 | 3.97e-24 | 97.1 |
| MS.gene39679.t1 | MTR_2g069010 | 40.708 | 113 | 62 | 2 | 16 | 124 | 21 | 132 | 4.10e-24 | 97.4 |
| MS.gene39679.t1 | MTR_7g056393 | 44.545 | 110 | 58 | 2 | 17 | 124 | 22 | 130 | 5.08e-24 | 97.1 |
| MS.gene39679.t1 | MTR_7g056393 | 50.000 | 54 | 27 | 0 | 123 | 176 | 320 | 373 | 2.01e-13 | 67.4 |
| MS.gene39679.t1 | MTR_2g069020 | 42.478 | 113 | 60 | 2 | 16 | 124 | 19 | 130 | 6.50e-24 | 96.7 |
| MS.gene39679.t1 | MTR_1g070185 | 41.667 | 108 | 63 | 0 | 17 | 124 | 23 | 130 | 1.91e-23 | 95.1 |
| MS.gene39679.t1 | MTR_8g009180 | 88.235 | 51 | 6 | 0 | 126 | 176 | 244 | 294 | 7.58e-23 | 92.4 |
| MS.gene39679.t1 | MTR_8g469400 | 43.307 | 127 | 54 | 4 | 5 | 126 | 7 | 120 | 8.62e-23 | 93.6 |
| MS.gene39679.t1 | MTR_8g469400 | 54.000 | 50 | 23 | 0 | 127 | 176 | 311 | 360 | 6.28e-12 | 63.2 |
| MS.gene39679.t1 | MTR_7g056370 | 34.266 | 143 | 80 | 5 | 18 | 151 | 2 | 139 | 1.26e-22 | 90.5 |
| MS.gene39679.t1 | MTR_0032s0040 | 45.378 | 119 | 51 | 2 | 15 | 123 | 15 | 129 | 2.39e-22 | 92.4 |
| MS.gene39679.t1 | MTR_7g105070 | 39.815 | 108 | 60 | 2 | 19 | 123 | 15 | 120 | 8.64e-20 | 85.1 |
| MS.gene39679.t1 | MTR_1g032250 | 38.182 | 110 | 60 | 2 | 19 | 124 | 28 | 133 | 1.90e-19 | 84.3 |
| MS.gene39679.t1 | MTR_1g032140 | 37.600 | 125 | 70 | 2 | 4 | 124 | 6 | 126 | 2.13e-19 | 84.3 |
| MS.gene39679.t1 | MTR_1g032220 | 38.182 | 110 | 60 | 2 | 19 | 124 | 28 | 133 | 9.51e-19 | 82.4 |
| MS.gene39679.t1 | MTR_8g008960 | 65.385 | 52 | 18 | 0 | 125 | 176 | 51 | 102 | 1.03e-18 | 77.4 |
| MS.gene39679.t1 | MTR_7g068650 | 34.426 | 122 | 73 | 3 | 19 | 133 | 6 | 127 | 3.47e-18 | 80.9 |
| MS.gene39679.t1 | MTR_1g043840 | 61.111 | 54 | 21 | 0 | 71 | 124 | 256 | 309 | 8.27e-18 | 79.7 |
| MS.gene39679.t1 | MTR_2g069070 | 40.541 | 111 | 45 | 3 | 16 | 124 | 21 | 112 | 1.79e-17 | 76.3 |
| MS.gene39679.t1 | MTR_2g069060 | 40.541 | 111 | 45 | 3 | 16 | 124 | 21 | 112 | 5.24e-16 | 74.7 |
| MS.gene39679.t1 | MTR_2g069060 | 60.000 | 45 | 17 | 1 | 132 | 176 | 306 | 349 | 5.74e-11 | 60.5 |
| MS.gene39679.t1 | MTR_2g068850 | 36.792 | 106 | 61 | 3 | 27 | 130 | 21 | 122 | 7.36e-16 | 72.8 |
| MS.gene39679.t1 | MTR_2g068840 | 36.792 | 106 | 61 | 3 | 27 | 130 | 21 | 122 | 9.14e-15 | 71.2 |
| MS.gene39679.t1 | MTR_2g068800 | 39.560 | 91 | 51 | 2 | 27 | 116 | 21 | 108 | 3.75e-14 | 68.9 |
| MS.gene39679.t1 | MTR_3g091350 | 31.429 | 140 | 82 | 3 | 3 | 137 | 6 | 136 | 3.78e-14 | 69.3 |
| MS.gene39679.t1 | MTR_2g069060 | 45.070 | 71 | 38 | 1 | 54 | 124 | 21 | 90 | 1.04e-12 | 64.7 |
| MS.gene39679.t1 | MTR_4g015790 | 28.244 | 131 | 78 | 2 | 19 | 133 | 5 | 135 | 1.49e-12 | 65.1 |
| MS.gene39679.t1 | MTR_1g034140 | 45.588 | 68 | 31 | 1 | 60 | 127 | 27 | 88 | 2.07e-12 | 64.3 |
| MS.gene39679.t1 | MTR_3g070860 | 27.966 | 118 | 82 | 1 | 19 | 133 | 6 | 123 | 3.79e-12 | 63.5 |
| MS.gene39679.t1 | MTR_5g082750 | 35.897 | 78 | 50 | 0 | 56 | 133 | 45 | 122 | 3.45e-11 | 60.8 |
| MS.gene39679.t1 | MTR_4g087130 | 41.176 | 68 | 37 | 1 | 60 | 124 | 26 | 93 | 3.60e-11 | 60.8 |
| MS.gene39679.t1 | MTR_7g056353 | 30.597 | 134 | 63 | 4 | 21 | 151 | 28 | 134 | 3.74e-11 | 61.2 |
| MS.gene39679.t1 | MTR_3g043900 | 35.455 | 110 | 57 | 3 | 27 | 129 | 17 | 119 | 3.79e-11 | 60.8 |
| MS.gene39679.t1 | MTR_3g045230 | 35.135 | 111 | 52 | 3 | 27 | 127 | 17 | 117 | 4.26e-11 | 60.8 |
| MS.gene39679.t1 | MTR_4g087120 | 41.429 | 70 | 38 | 1 | 60 | 126 | 26 | 95 | 5.49e-11 | 60.5 |
| MS.gene39679.t1 | MTR_5g055800 | 34.314 | 102 | 61 | 3 | 27 | 126 | 12 | 109 | 5.92e-11 | 60.1 |
| MS.gene39679.t1 | MTR_1g034060 | 40.789 | 76 | 40 | 1 | 60 | 130 | 26 | 101 | 8.82e-11 | 59.7 |
| MS.gene39679.t1 | MTR_1g034120 | 40.789 | 76 | 40 | 1 | 60 | 130 | 26 | 101 | 9.17e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39679.t1 | AT5G59540 | 53.509 | 114 | 48 | 2 | 17 | 126 | 14 | 126 | 9.62e-35 | 123 |
| MS.gene39679.t1 | AT5G59540 | 53.509 | 114 | 48 | 2 | 17 | 126 | 14 | 126 | 3.08e-34 | 124 |
| MS.gene39679.t1 | AT5G59540 | 50.000 | 52 | 26 | 0 | 125 | 176 | 315 | 366 | 8.65e-12 | 62.8 |
| MS.gene39679.t1 | AT1G06640 | 48.872 | 133 | 55 | 5 | 4 | 126 | 1 | 130 | 5.01e-31 | 114 |
| MS.gene39679.t1 | AT5G59530 | 52.632 | 114 | 46 | 4 | 17 | 125 | 13 | 123 | 5.99e-31 | 115 |
| MS.gene39679.t1 | AT5G59530 | 50.000 | 52 | 26 | 0 | 125 | 176 | 313 | 364 | 2.05e-11 | 61.6 |
| MS.gene39679.t1 | AT1G06640 | 48.872 | 133 | 55 | 5 | 4 | 126 | 1 | 130 | 7.21e-31 | 114 |
| MS.gene39679.t1 | AT1G06620 | 51.376 | 109 | 49 | 2 | 19 | 124 | 18 | 125 | 1.70e-30 | 112 |
| MS.gene39679.t1 | AT1G06640 | 48.872 | 133 | 55 | 5 | 4 | 126 | 1 | 130 | 1.85e-30 | 114 |
| MS.gene39679.t1 | AT1G06640 | 58.824 | 51 | 21 | 0 | 126 | 176 | 319 | 369 | 2.24e-14 | 70.1 |
| MS.gene39679.t1 | AT1G06645 | 48.361 | 122 | 56 | 2 | 9 | 124 | 21 | 141 | 4.57e-30 | 113 |
| MS.gene39679.t1 | AT1G06645 | 62.745 | 51 | 19 | 0 | 126 | 176 | 329 | 379 | 5.26e-17 | 77.8 |
| MS.gene39679.t1 | AT1G06620 | 51.376 | 109 | 49 | 2 | 19 | 124 | 18 | 125 | 6.02e-30 | 112 |
| MS.gene39679.t1 | AT1G06620 | 52.941 | 51 | 24 | 0 | 126 | 176 | 315 | 365 | 2.22e-13 | 67.4 |
| MS.gene39679.t1 | AT1G04350 | 48.276 | 116 | 52 | 2 | 14 | 125 | 8 | 119 | 1.05e-29 | 112 |
| MS.gene39679.t1 | AT1G03410 | 48.246 | 114 | 53 | 2 | 16 | 124 | 8 | 120 | 2.62e-29 | 110 |
| MS.gene39679.t1 | AT1G03410 | 48.246 | 114 | 53 | 2 | 16 | 124 | 45 | 157 | 3.27e-29 | 111 |
| MS.gene39679.t1 | AT5G43440 | 47.107 | 121 | 56 | 2 | 15 | 129 | 11 | 129 | 3.71e-29 | 109 |
| MS.gene39679.t1 | AT2G30830 | 47.748 | 111 | 57 | 1 | 17 | 126 | 10 | 120 | 9.59e-29 | 109 |
| MS.gene39679.t1 | AT2G30830 | 56.522 | 46 | 20 | 0 | 131 | 176 | 313 | 358 | 2.96e-12 | 63.9 |
| MS.gene39679.t1 | AT5G43440 | 47.107 | 121 | 56 | 2 | 15 | 129 | 11 | 129 | 1.35e-28 | 108 |
| MS.gene39679.t1 | AT1G06650 | 47.826 | 115 | 54 | 2 | 16 | 124 | 14 | 128 | 3.37e-28 | 107 |
| MS.gene39679.t1 | AT1G06650 | 47.826 | 115 | 54 | 2 | 16 | 124 | 14 | 128 | 6.52e-28 | 107 |
| MS.gene39679.t1 | AT1G06650 | 62.745 | 51 | 19 | 0 | 126 | 176 | 319 | 369 | 2.90e-17 | 78.2 |
| MS.gene39679.t1 | AT3G61400 | 41.406 | 128 | 68 | 2 | 4 | 124 | 1 | 128 | 2.01e-27 | 104 |
| MS.gene39679.t1 | AT2G30840 | 46.491 | 114 | 56 | 2 | 16 | 124 | 9 | 122 | 3.65e-27 | 104 |
| MS.gene39679.t1 | AT3G61400 | 41.406 | 128 | 68 | 2 | 4 | 124 | 1 | 128 | 4.16e-27 | 105 |
| MS.gene39679.t1 | AT2G30840 | 46.491 | 114 | 56 | 2 | 16 | 124 | 9 | 122 | 7.33e-27 | 104 |
| MS.gene39679.t1 | AT2G30840 | 54.167 | 48 | 22 | 0 | 129 | 176 | 315 | 362 | 3.78e-11 | 60.8 |
| MS.gene39679.t1 | AT2G30840 | 46.491 | 114 | 56 | 2 | 16 | 124 | 9 | 122 | 7.43e-27 | 104 |
| MS.gene39679.t1 | AT2G30840 | 54.167 | 48 | 22 | 0 | 129 | 176 | 309 | 356 | 3.96e-11 | 60.8 |
| MS.gene39679.t1 | AT2G25450 | 46.018 | 113 | 58 | 2 | 16 | 126 | 9 | 120 | 2.78e-26 | 102 |
| MS.gene39679.t1 | AT5G43450 | 44.828 | 116 | 54 | 3 | 15 | 124 | 11 | 122 | 4.60e-26 | 100 |
| MS.gene39679.t1 | AT5G43450 | 44.828 | 116 | 54 | 3 | 15 | 124 | 11 | 122 | 9.08e-26 | 101 |
| MS.gene39679.t1 | AT1G03400 | 43.363 | 113 | 51 | 3 | 16 | 124 | 8 | 111 | 1.86e-22 | 92.4 |
| MS.gene39679.t1 | AT1G03400 | 43.363 | 113 | 51 | 3 | 16 | 124 | 8 | 111 | 1.86e-22 | 92.8 |
| MS.gene39679.t1 | AT1G04380 | 40.541 | 111 | 48 | 3 | 16 | 125 | 13 | 106 | 2.80e-20 | 85.5 |
| MS.gene39679.t1 | AT1G04380 | 40.541 | 111 | 48 | 3 | 16 | 125 | 13 | 106 | 5.69e-20 | 85.5 |
| MS.gene39679.t1 | AT1G04380 | 51.923 | 52 | 25 | 0 | 125 | 176 | 294 | 345 | 6.19e-12 | 63.2 |
| MS.gene39679.t1 | AT3G13610 | 36.538 | 104 | 51 | 4 | 27 | 124 | 26 | 120 | 2.35e-13 | 67.4 |
| MS.gene39679.t1 | AT1G55290 | 39.048 | 105 | 48 | 5 | 27 | 124 | 25 | 120 | 2.74e-13 | 67.0 |
| MS.gene39679.t1 | AT2G38240 | 29.661 | 118 | 74 | 2 | 20 | 133 | 4 | 116 | 2.48e-12 | 64.3 |
| MS.gene39679.t1 | AT3G19010 | 43.836 | 73 | 39 | 1 | 55 | 127 | 23 | 93 | 2.87e-12 | 63.9 |
| MS.gene39679.t1 | AT3G19010 | 43.836 | 73 | 39 | 1 | 55 | 127 | 23 | 93 | 2.94e-12 | 63.9 |
| MS.gene39679.t1 | AT3G19010 | 43.836 | 73 | 39 | 1 | 55 | 127 | 23 | 93 | 2.94e-12 | 63.9 |
| MS.gene39679.t1 | AT3G19010 | 43.836 | 73 | 39 | 1 | 55 | 127 | 23 | 93 | 3.33e-12 | 63.5 |
| MS.gene39679.t1 | AT3G12900 | 29.412 | 153 | 93 | 4 | 27 | 174 | 21 | 163 | 6.92e-12 | 63.2 |
| MS.gene39679.t1 | AT2G44800 | 28.099 | 121 | 80 | 3 | 21 | 137 | 9 | 126 | 5.29e-11 | 60.5 |
Find 39 sgRNAs with CRISPR-Local
Find 111 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACACTAGTTTCTCTGTATT+TGG | 0.065835 | 8.3:+79843966 | None:intergenic |
| CTTTATTATCAATATCTTTA+AGG | 0.122806 | 8.3:+79845357 | None:intergenic |
| CATAGGTCCATAGAGCTTTA+TGG | 0.201246 | 8.3:+79844017 | None:intergenic |
| CCTCATATTTGTCTGGTTGA+TGG | 0.257369 | 8.3:+79845417 | None:intergenic |
| ACACTAGTTTCTCTGTATTT+GGG | 0.354261 | 8.3:+79843967 | None:intergenic |
| TTGGCTTCCTCATATTTGTC+TGG | 0.377614 | 8.3:+79845410 | None:intergenic |
| GTTAGGTTTGGTTGTATCAA+TGG | 0.379115 | 8.3:+79845541 | None:intergenic |
| AAAGCATCCATAAAGCTCTA+TGG | 0.389751 | 8.3:-79844024 | MS.gene39679:CDS |
| TCTGATAATAATTCCTTCAT+AGG | 0.414561 | 8.3:+79844000 | None:intergenic |
| ACAATTCCTTGATGAATACT+TGG | 0.419418 | 8.3:+79845332 | None:intergenic |
| TCAAGGAAGCATGTGAAACT+TGG | 0.431792 | 8.3:-79845301 | MS.gene39679:CDS |
| TTGAATGTGGAATCAAGGTT+AGG | 0.444552 | 8.3:+79845524 | None:intergenic |
| TTTCGAGCAAAAGGACTAGA+TGG | 0.446957 | 8.3:-79843925 | MS.gene39679:CDS |
| GTGGCCTACTTTCGAGCAAA+AGG | 0.449952 | 8.3:-79843934 | MS.gene39679:CDS |
| GTTCTTGAGGAGGTGAAAGA+TGG | 0.464397 | 8.3:-79845239 | MS.gene39679:CDS |
| GTTCATTGAATGTGGAATCA+AGG | 0.469424 | 8.3:+79845519 | None:intergenic |
| AATAACATGACTTGTGTTGT+TGG | 0.488088 | 8.3:+79845391 | None:intergenic |
| TGTGGAATCAAGGTTAGGTT+TGG | 0.492547 | 8.3:+79845529 | None:intergenic |
| CCCTTTGAGTGTTCTTGAGG+AGG | 0.493576 | 8.3:-79845249 | MS.gene39679:CDS |
| CAAGGAAGCATGTGAAACTT+GGG | 0.494320 | 8.3:-79845300 | MS.gene39679:CDS |
| AAAGCTCTATGGACCTATGA+AGG | 0.518301 | 8.3:-79844013 | MS.gene39679:CDS |
| AGGAATTGTTGACGATATCA+AGG | 0.530296 | 8.3:-79845318 | MS.gene39679:CDS |
| GAAACAAAAGCAGGTGTGAA+AGG | 0.532657 | 8.3:-79845482 | MS.gene39679:CDS |
| CATATTTGTCTGGTTGATGG+TGG | 0.543038 | 8.3:+79845420 | None:intergenic |
| TGCTTTGCGTTCATTGAATG+TGG | 0.544374 | 8.3:+79845511 | None:intergenic |
| AATCCCTTTGAGTGTTCTTG+AGG | 0.545874 | 8.3:-79845252 | MS.gene39679:CDS |
| ACCTCCTCAAGAACACTCAA+AGG | 0.547379 | 8.3:+79845248 | None:intergenic |
| CCTCCTCAAGAACACTCAAA+GGG | 0.551009 | 8.3:+79845249 | None:intergenic |
| CCATCAACCAGACAAATATG+AGG | 0.555026 | 8.3:-79845417 | MS.gene39679:CDS |
| AGGTGAAAGATGGAGTGAAG+AGG | 0.558342 | 8.3:-79845229 | MS.gene39679:CDS |
| AACTAGTGTTGCTGATTATG+TGG | 0.561302 | 8.3:-79843953 | MS.gene39679:CDS |
| CAATTCCTTGATGAATACTT+GGG | 0.576394 | 8.3:+79845333 | None:intergenic |
| CTAGTTTCTCTGTATTTGGG+AGG | 0.580147 | 8.3:+79843970 | None:intergenic |
| ATATCTTTAAGGTCGATGAC+AGG | 0.590653 | 8.3:+79845368 | None:intergenic |
| GTGAAAGGACTTGTTGATGC+AGG | 0.590786 | 8.3:-79845467 | MS.gene39679:CDS |
| GCATTTGATGAAACAAAAGC+AGG | 0.595830 | 8.3:-79845491 | MS.gene39679:CDS |
| AAAGACCCAAGTATTCATCA+AGG | 0.600194 | 8.3:-79845338 | MS.gene39679:CDS |
| GGTTGATGGTGGAATAAGCT+TGG | 0.607514 | 8.3:+79845431 | None:intergenic |
| AAGGAAGCATGTGAAACTTG+GGG | 0.628246 | 8.3:-79845299 | MS.gene39679:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCATAAAACAAATAAATATT+AGG | - | chr8.3:79844616-79844635 | MS.gene39679:intron | 10.0% |
| !! | CTTTATTATCAATATCTTTA+AGG | + | chr8.3:79844088-79844107 | None:intergenic | 15.0% |
| !! | TTTGAAGATATTAAATATGA+AGG | - | chr8.3:79845244-79845263 | MS.gene39679:CDS | 15.0% |
| !!! | AAAATTGCTATTGTAAATAA+AGG | + | chr8.3:79844297-79844316 | None:intergenic | 15.0% |
| !! | AAGATATTAAATATGAAGGA+TGG | - | chr8.3:79845248-79845267 | MS.gene39679:CDS | 20.0% |
| !! | AAGTTCTTTATGAAGATAAA+TGG | - | chr8.3:79844986-79845005 | MS.gene39679:intron | 20.0% |
| !! | ATTTATCTTCATAAAGAACT+TGG | + | chr8.3:79844987-79845006 | None:intergenic | 20.0% |
| !! | GTAAGGATTAAATTCAATTT+CGG | + | chr8.3:79844681-79844700 | None:intergenic | 20.0% |
| !!! | CATTATTGAATCTAAGATAA+AGG | - | chr8.3:79845194-79845213 | MS.gene39679:intron | 20.0% |
| !!! | GTTTTATATTTTGTATCAGT+TGG | + | chr8.3:79844656-79844675 | None:intergenic | 20.0% |
| !!! | TTTTTTCAAGTTGTTAATCA+TGG | - | chr8.3:79844167-79844186 | MS.gene39679:intron | 20.0% |
| ! | AGAGATGTAATACTAGAATA+TGG | - | chr8.3:79844742-79844761 | MS.gene39679:intron | 25.0% |
| ! | AGCAACAAAAAAAAACAGTA+AGG | + | chr8.3:79844698-79844717 | None:intergenic | 25.0% |
| ! | AGTGCATTACTAATAGTTTA+AGG | + | chr8.3:79845100-79845119 | None:intergenic | 25.0% |
| ! | ATCTTATAAATAGATCTTCC+TGG | + | chr8.3:79844591-79844610 | None:intergenic | 25.0% |
| ! | GAGATGTAATACTAGAATAT+GGG | - | chr8.3:79844743-79844762 | MS.gene39679:intron | 25.0% |
| ! | TCTGATAATAATTCCTTCAT+AGG | + | chr8.3:79845445-79845464 | None:intergenic | 25.0% |
| !!! | AAATATGAAGGATGGATTAT+AGG | - | chr8.3:79845256-79845275 | MS.gene39679:CDS | 25.0% |
| !!! | CACTTTAAGATGTGAAATTA+TGG | - | chr8.3:79844513-79844532 | MS.gene39679:intron | 25.0% |
| AAACATGCAACAGATATTCT+TGG | + | chr8.3:79845382-79845401 | None:intergenic | 30.0% | |
| AATACTAGAATATGGGAAAC+AGG | - | chr8.3:79844750-79844769 | MS.gene39679:intron | 30.0% | |
| ACAATTCCTTGATGAATACT+TGG | + | chr8.3:79844113-79844132 | None:intergenic | 30.0% | |
| ACTTATTGAGCAATCAGAAT+CGG | - | chr8.3:79845161-79845180 | MS.gene39679:intron | 30.0% | |
| CAATTCCTTGATGAATACTT+GGG | + | chr8.3:79844112-79844131 | None:intergenic | 30.0% | |
| CACATCTTAAAGTGAATAAG+TGG | + | chr8.3:79844507-79844526 | None:intergenic | 30.0% | |
| GCATGTGTGTAAAATTTATG+CGG | - | chr8.3:79844427-79844446 | MS.gene39679:intron | 30.0% | |
| TATGGATATTGCAACATGTA+GGG | - | chr8.3:79844458-79844477 | MS.gene39679:intron | 30.0% | |
| TCCAAACCATCTAAAAGATA+TGG | - | chr8.3:79844828-79844847 | MS.gene39679:intron | 30.0% | |
| ! | AAAGATATGGATTGTGCTAA+AGG | - | chr8.3:79844841-79844860 | MS.gene39679:intron | 30.0% |
| ! | AACACTAGTTTCTCTGTATT+TGG | + | chr8.3:79845479-79845498 | None:intergenic | 30.0% |
| ! | AATAACATGACTTGTGTTGT+TGG | + | chr8.3:79844054-79844073 | None:intergenic | 30.0% |
| ! | ACACTAGTTTCTCTGTATTT+GGG | + | chr8.3:79845478-79845497 | None:intergenic | 30.0% |
| ! | ATGAAATGCATATTTTCTCC+AGG | - | chr8.3:79844570-79844589 | MS.gene39679:intron | 30.0% |
| ! | CACAATCCATATCTTTTAGA+TGG | + | chr8.3:79844837-79844856 | None:intergenic | 30.0% |
| ! | TCCATATCTTTTAGATGGTT+TGG | + | chr8.3:79844832-79844851 | None:intergenic | 30.0% |
| !!! | GGATAGTTTTAGTTGTTACT+TGG | - | chr8.3:79844349-79844368 | MS.gene39679:intron | 30.0% |
| AAAGACCCAAGTATTCATCA+AGG | - | chr8.3:79844104-79844123 | MS.gene39679:intron | 35.0% | |
| AGACTACTTGACTAAGAAGA+AGG | - | chr8.3:79844541-79844560 | MS.gene39679:intron | 35.0% | |
| AGGAATTGTTGACGATATCA+AGG | - | chr8.3:79844124-79844143 | MS.gene39679:intron | 35.0% | |
| ATTGATATAACACCTGTTCC+TGG | - | chr8.3:79845009-79845028 | MS.gene39679:intron | 35.0% | |
| GATTCTGATTGCTCAATAAG+TGG | + | chr8.3:79845162-79845181 | None:intergenic | 35.0% | |
| GCATTTGATGAAACAAAAGC+AGG | - | chr8.3:79843951-79843970 | MS.gene39679:CDS | 35.0% | |
| GTAAAATTTATGCGGTCAGT+TGG | - | chr8.3:79844435-79844454 | MS.gene39679:intron | 35.0% | |
| GTATGGATATTGCAACATGT+AGG | - | chr8.3:79844457-79844476 | MS.gene39679:intron | 35.0% | |
| GTTCATTGAATGTGGAATCA+AGG | + | chr8.3:79843926-79843945 | None:intergenic | 35.0% | |
| TTGAATGTGGAATCAAGGTT+AGG | + | chr8.3:79843921-79843940 | None:intergenic | 35.0% | |
| ! | AAAGCATCCATAAAGCTCTA+TGG | - | chr8.3:79845418-79845437 | MS.gene39679:CDS | 35.0% |
| ! | AACTAGTGTTGCTGATTATG+TGG | - | chr8.3:79845489-79845508 | MS.gene39679:CDS | 35.0% |
| ! | GTTAGGTTTGGTTGTATCAA+TGG | + | chr8.3:79843904-79843923 | None:intergenic | 35.0% |
| !! | ATATCTTTAAGGTCGATGAC+AGG | + | chr8.3:79844077-79844096 | None:intergenic | 35.0% |
| !! | GAATTGATGTCAGAAGCATT+AGG | - | chr8.3:79844799-79844818 | MS.gene39679:intron | 35.0% |
| !!! | TAATGTTGGTGATCTTTTGC+AGG | - | chr8.3:79845044-79845063 | MS.gene39679:intron | 35.0% |
| AAAGCTCTATGGACCTATGA+AGG | - | chr8.3:79845429-79845448 | MS.gene39679:CDS | 40.0% | |
| AATCCCTTTGAGTGTTCTTG+AGG | - | chr8.3:79844190-79844209 | MS.gene39679:intron | 40.0% | |
| ACAAACATACCTGCATACTG+CGG | + | chr8.3:79844405-79844424 | None:intergenic | 40.0% | |
| ACAGATATTCTTGGACCAAC+TGG | + | chr8.3:79845373-79845392 | None:intergenic | 40.0% | |
| ACATTAACTATGAGAGCTCC+AGG | + | chr8.3:79845030-79845049 | None:intergenic | 40.0% | |
| CAGGACAAGAAGGATAGTAA+TGG | + | chr8.3:79844882-79844901 | None:intergenic | 40.0% | |
| CATAGGTCCATAGAGCTTTA+TGG | + | chr8.3:79845428-79845447 | None:intergenic | 40.0% | |
| CCATCAACCAGACAAATATG+AGG | - | chr8.3:79844025-79844044 | MS.gene39679:CDS | 40.0% | |
| CCTCATATTTGTCTGGTTGA+TGG | + | chr8.3:79844028-79844047 | None:intergenic | 40.0% | |
| CTAGTTTCTCTGTATTTGGG+AGG | + | chr8.3:79845475-79845494 | None:intergenic | 40.0% | |
| CTTCTACAAGACCATATTGG+TGG | - | chr8.3:79844958-79844977 | MS.gene39679:intron | 40.0% | |
| GAAACAAAAGCAGGTGTGAA+AGG | - | chr8.3:79843960-79843979 | MS.gene39679:CDS | 40.0% | |
| GGAGCTCTCATAGTTAATGT+TGG | - | chr8.3:79845030-79845049 | MS.gene39679:intron | 40.0% | |
| GTGCTTCTACAAGACCATAT+TGG | - | chr8.3:79844955-79844974 | MS.gene39679:intron | 40.0% | |
| TAGGGTTGTGGTTCAAATCT+GGG | - | chr8.3:79844476-79844495 | MS.gene39679:intron | 40.0% | |
| TATTCTTGGACCAACTGGAT+TGG | + | chr8.3:79845368-79845387 | None:intergenic | 40.0% | |
| TATTGCAACATGTAGGGTTG+TGG | - | chr8.3:79844464-79844483 | MS.gene39679:intron | 40.0% | |
| TGCTTTGCGTTCATTGAATG+TGG | + | chr8.3:79843934-79843953 | None:intergenic | 40.0% | |
| TGTGGAATCAAGGTTAGGTT+TGG | + | chr8.3:79843916-79843935 | None:intergenic | 40.0% | |
| TTGGCTTCCTCATATTTGTC+TGG | + | chr8.3:79844035-79844054 | None:intergenic | 40.0% | |
| TTTCGAGCAAAAGGACTAGA+TGG | - | chr8.3:79845517-79845536 | MS.gene39679:CDS | 40.0% | |
| ! | AAGGAAGCATGTGAAACTTG+GGG | - | chr8.3:79844143-79844162 | MS.gene39679:intron | 40.0% |
| ! | ATTTATGCGGTCAGTTGGTA+TGG | - | chr8.3:79844440-79844459 | MS.gene39679:intron | 40.0% |
| ! | CAAGGAAGCATGTGAAACTT+GGG | - | chr8.3:79844142-79844161 | MS.gene39679:intron | 40.0% |
| ! | TAGTCCTTTTGCTCGAAAGT+AGG | + | chr8.3:79845515-79845534 | None:intergenic | 40.0% |
| ! | TATGGATGCTTTAAGTGCTG+TGG | + | chr8.3:79845410-79845429 | None:intergenic | 40.0% |
| ! | TCAAGGAAGCATGTGAAACT+TGG | - | chr8.3:79844141-79844160 | MS.gene39679:intron | 40.0% |
| !! | AATTCTGGTTCAGGACAAGA+AGG | + | chr8.3:79844892-79844911 | None:intergenic | 40.0% |
| !! | CATATTTGTCTGGTTGATGG+TGG | + | chr8.3:79844025-79844044 | None:intergenic | 40.0% |
| !! | CATTGATTCGATTGTTGGTC+AGG | - | chr8.3:79845220-79845239 | MS.gene39679:CDS | 40.0% |
| !! | GGTCTCATTGATTCGATTGT+TGG | - | chr8.3:79845215-79845234 | MS.gene39679:CDS | 40.0% |
| ACCTCCTCAAGAACACTCAA+AGG | + | chr8.3:79844197-79844216 | None:intergenic | 45.0% | |
| AGGTGAAAGATGGAGTGAAG+AGG | - | chr8.3:79844213-79844232 | MS.gene39679:intron | 45.0% | |
| ATAGCTCTCCAGCACTCAAT+TGG | - | chr8.3:79844324-79844343 | MS.gene39679:intron | 45.0% | |
| CAAACATACCTGCATACTGC+GGG | + | chr8.3:79844404-79844423 | None:intergenic | 45.0% | |
| CATACTGCGGGAAAATCTTC+TGG | + | chr8.3:79844392-79844411 | None:intergenic | 45.0% | |
| CCTCCTCAAGAACACTCAAA+GGG | + | chr8.3:79844196-79844215 | None:intergenic | 45.0% | |
| CCTGAACCAGAATTGACTGT+GGG | - | chr8.3:79844898-79844917 | MS.gene39679:intron | 45.0% | |
| GAACTTGGAGACCACCAATA+TGG | + | chr8.3:79844972-79844991 | None:intergenic | 45.0% | |
| GGGAAACAGGTGATGAATCT+TGG | - | chr8.3:79844763-79844782 | MS.gene39679:intron | 45.0% | |
| GTAGGGTTGTGGTTCAAATC+TGG | - | chr8.3:79844475-79844494 | MS.gene39679:intron | 45.0% | |
| GTTCTTGAGGAGGTGAAAGA+TGG | - | chr8.3:79844203-79844222 | MS.gene39679:intron | 45.0% | |
| GTTGTTCCCACAGTCAATTC+TGG | + | chr8.3:79844907-79844926 | None:intergenic | 45.0% | |
| TCCTGAACCAGAATTGACTG+TGG | - | chr8.3:79844897-79844916 | MS.gene39679:intron | 45.0% | |
| ! | AAGATTTTCCCGCAGTATGC+AGG | - | chr8.3:79844393-79844412 | MS.gene39679:intron | 45.0% |
| ! | AGAGTACTTGCCAATCCAGT+TGG | - | chr8.3:79845355-79845374 | MS.gene39679:CDS | 45.0% |
| ! | TGCGGGAAAATCTTCTGGTT+TGG | + | chr8.3:79844387-79844406 | None:intergenic | 45.0% |
| !! | GCGGGAAAATCTTCTGGTTT+GGG | + | chr8.3:79844386-79844405 | None:intergenic | 45.0% |
| !! | GGAAAATCTTCTGGTTTGGG+AGG | + | chr8.3:79844383-79844402 | None:intergenic | 45.0% |
| !! | GGTTGATGGTGGAATAAGCT+TGG | + | chr8.3:79844014-79844033 | None:intergenic | 45.0% |
| !! | GTGAAAGGACTTGTTGATGC+AGG | - | chr8.3:79843975-79843994 | MS.gene39679:CDS | 45.0% |
| ACTATGAGAGCTCCAGGAAC+AGG | + | chr8.3:79845024-79845043 | None:intergenic | 50.0% | |
| CCCTTTGAGTGTTCTTGAGG+AGG | - | chr8.3:79844193-79844212 | MS.gene39679:intron | 50.0% | |
| CTATCCCTCCAATTGAGTGC+TGG | + | chr8.3:79844335-79844354 | None:intergenic | 50.0% | |
| CTCTCCAGCACTCAATTGGA+GGG | - | chr8.3:79844328-79844347 | MS.gene39679:intron | 50.0% | |
| GTGGCCTACTTTCGAGCAAA+AGG | - | chr8.3:79845508-79845527 | MS.gene39679:CDS | 50.0% | |
| !! | CCCACAGTCAATTCTGGTTC+AGG | + | chr8.3:79844901-79844920 | None:intergenic | 50.0% |
| !! | TCTTCTGGTTTGGGAGGATC+AGG | + | chr8.3:79844377-79844396 | None:intergenic | 50.0% |
| GCTCTCCAGCACTCAATTGG+AGG | - | chr8.3:79844327-79844346 | MS.gene39679:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 79843894 | 79845570 | 79843894 | ID=MS.gene39679 |
| chr8.3 | mRNA | 79843894 | 79845570 | 79843894 | ID=MS.gene39679.t1;Parent=MS.gene39679 |
| chr8.3 | exon | 79845198 | 79845570 | 79845198 | ID=MS.gene39679.t1.exon1;Parent=MS.gene39679.t1 |
| chr8.3 | CDS | 79845198 | 79845570 | 79845198 | ID=cds.MS.gene39679.t1;Parent=MS.gene39679.t1 |
| chr8.3 | exon | 79843894 | 79844051 | 79843894 | ID=MS.gene39679.t1.exon2;Parent=MS.gene39679.t1 |
| chr8.3 | CDS | 79843894 | 79844051 | 79843894 | ID=cds.MS.gene39679.t1;Parent=MS.gene39679.t1 |
| Gene Sequence |
| Protein sequence |
