Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene42798.t1 | XP_003626868.2 | 97 | 433 | 13 | 0 | 135 | 567 | 12 | 444 | 2.20E-250 | 874.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene42798.t1 | Q39202 | 41.1 | 431 | 225 | 14 | 156 | 567 | 31 | 451 | 7.5e-82 | 306.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene42798.t1 | G7LEC0 | 97.0 | 433 | 13 | 0 | 135 | 567 | 12 | 444 | 1.6e-250 | 874.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049170 | MS.gene42798 | 0.809062 | 2.28E-50 | -1.69E-46 |
MS.gene049346 | MS.gene42798 | 0.837909 | 3.94E-57 | -1.69E-46 |
MS.gene049910 | MS.gene42798 | 0.81298 | 3.23E-51 | -1.69E-46 |
MS.gene049993 | MS.gene42798 | 0.889821 | 1.72E-73 | -1.69E-46 |
MS.gene050060 | MS.gene42798 | 0.807163 | 5.78E-50 | -1.69E-46 |
MS.gene050133 | MS.gene42798 | -0.814451 | 1.53E-51 | -1.69E-46 |
MS.gene050315 | MS.gene42798 | 0.841931 | 3.52E-58 | -1.69E-46 |
MS.gene050397 | MS.gene42798 | 0.846298 | 2.37E-59 | -1.69E-46 |
MS.gene050400 | MS.gene42798 | 0.800535 | 1.38E-48 | -1.69E-46 |
MS.gene050406 | MS.gene42798 | 0.833591 | 4.88E-56 | -1.69E-46 |
MS.gene050426 | MS.gene42798 | -0.883647 | 3.76E-71 | -1.69E-46 |
MS.gene050464 | MS.gene42798 | 0.836636 | 8.33E-57 | -1.69E-46 |
MS.gene050529 | MS.gene42798 | 0.829738 | 4.35E-55 | -1.69E-46 |
MS.gene050640 | MS.gene42798 | 0.800395 | 1.47E-48 | -1.69E-46 |
MS.gene050642 | MS.gene42798 | 0.830182 | 3.39E-55 | -1.69E-46 |
MS.gene050670 | MS.gene42798 | 0.872963 | 2.12E-67 | -1.69E-46 |
MS.gene05105 | MS.gene42798 | 0.81865 | 1.75E-52 | -1.69E-46 |
MS.gene051158 | MS.gene42798 | -0.805674 | 1.19E-49 | -1.69E-46 |
MS.gene051171 | MS.gene42798 | 0.817268 | 3.60E-52 | -1.69E-46 |
MS.gene051208 | MS.gene42798 | 0.874961 | 4.48E-68 | -1.69E-46 |
MS.gene051242 | MS.gene42798 | 0.801603 | 8.33E-49 | -1.69E-46 |
MS.gene051525 | MS.gene42798 | 0.906167 | 1.98E-80 | -1.69E-46 |
MS.gene051582 | MS.gene42798 | 0.877234 | 7.40E-69 | -1.69E-46 |
MS.gene051588 | MS.gene42798 | 0.817014 | 4.11E-52 | -1.69E-46 |
MS.gene051860 | MS.gene42798 | 0.809208 | 2.12E-50 | -1.69E-46 |
MS.gene051983 | MS.gene42798 | 0.824645 | 7.21E-54 | -1.69E-46 |
MS.gene052011 | MS.gene42798 | -0.927763 | 7.46E-92 | -1.69E-46 |
MS.gene052077 | MS.gene42798 | 0.854817 | 9.56E-62 | -1.69E-46 |
MS.gene052128 | MS.gene42798 | -0.817873 | 2.63E-52 | -1.69E-46 |
MS.gene052134 | MS.gene42798 | 0.871367 | 7.21E-67 | -1.69E-46 |
MS.gene052135 | MS.gene42798 | 0.874905 | 4.69E-68 | -1.69E-46 |
MS.gene052136 | MS.gene42798 | 0.822599 | 2.17E-53 | -1.69E-46 |
MS.gene052188 | MS.gene42798 | 0.820352 | 7.18E-53 | -1.69E-46 |
MS.gene052223 | MS.gene42798 | -0.820656 | 6.11E-53 | -1.69E-46 |
MS.gene052253 | MS.gene42798 | 0.878212 | 3.37E-69 | -1.69E-46 |
MS.gene052310 | MS.gene42798 | 0.821757 | 3.41E-53 | -1.69E-46 |
MS.gene052340 | MS.gene42798 | 0.846614 | 1.94E-59 | -1.69E-46 |
MS.gene052389 | MS.gene42798 | 0.817043 | 4.05E-52 | -1.69E-46 |
MS.gene052414 | MS.gene42798 | 0.805083 | 1.58E-49 | -1.69E-46 |
MS.gene052469 | MS.gene42798 | 0.804017 | 2.64E-49 | -1.69E-46 |
MS.gene052481 | MS.gene42798 | 0.828547 | 8.46E-55 | -1.69E-46 |
MS.gene052485 | MS.gene42798 | 0.810085 | 1.37E-50 | -1.69E-46 |
MS.gene052501 | MS.gene42798 | 0.816821 | 4.54E-52 | -1.69E-46 |
MS.gene052505 | MS.gene42798 | 0.834981 | 2.19E-56 | -1.69E-46 |
MS.gene052589 | MS.gene42798 | 0.875184 | 3.76E-68 | -1.69E-46 |
MS.gene052590 | MS.gene42798 | 0.857367 | 1.71E-62 | -1.69E-46 |
MS.gene052758 | MS.gene42798 | 0.833509 | 5.12E-56 | -1.69E-46 |
MS.gene052762 | MS.gene42798 | 0.802558 | 5.30E-49 | -1.69E-46 |
MS.gene052982 | MS.gene42798 | 0.812487 | 4.14E-51 | -1.69E-46 |
MS.gene053330 | MS.gene42798 | 0.905595 | 3.64E-80 | -1.69E-46 |
MS.gene053836 | MS.gene42798 | 0.837438 | 5.20E-57 | -1.69E-46 |
MS.gene053873 | MS.gene42798 | 0.817513 | 3.17E-52 | -1.69E-46 |
MS.gene053907 | MS.gene42798 | 0.800282 | 1.55E-48 | -1.69E-46 |
MS.gene053971 | MS.gene42798 | 0.837612 | 4.69E-57 | -1.69E-46 |
MS.gene054102 | MS.gene42798 | 0.870777 | 1.13E-66 | -1.69E-46 |
MS.gene054107 | MS.gene42798 | 0.810793 | 9.66E-51 | -1.69E-46 |
MS.gene054110 | MS.gene42798 | 0.868021 | 8.90E-66 | -1.69E-46 |
MS.gene05412 | MS.gene42798 | 0.801885 | 7.29E-49 | -1.69E-46 |
MS.gene05413 | MS.gene42798 | 0.820516 | 6.58E-53 | -1.69E-46 |
MS.gene054173 | MS.gene42798 | 0.809572 | 1.77E-50 | -1.69E-46 |
MS.gene054183 | MS.gene42798 | 0.8923 | 1.80E-74 | -1.69E-46 |
MS.gene054349 | MS.gene42798 | 0.84396 | 1.02E-58 | -1.69E-46 |
MS.gene054473 | MS.gene42798 | 0.817567 | 3.08E-52 | -1.69E-46 |
MS.gene054556 | MS.gene42798 | 0.815239 | 1.02E-51 | -1.69E-46 |
MS.gene054719 | MS.gene42798 | 0.893427 | 6.35E-75 | -1.69E-46 |
MS.gene054742 | MS.gene42798 | -0.81523 | 1.03E-51 | -1.69E-46 |
MS.gene054918 | MS.gene42798 | 0.85334 | 2.55E-61 | -1.69E-46 |
MS.gene054920 | MS.gene42798 | 0.8209 | 5.37E-53 | -1.69E-46 |
MS.gene054983 | MS.gene42798 | 0.827477 | 1.53E-54 | -1.69E-46 |
MS.gene055116 | MS.gene42798 | 0.858242 | 9.42E-63 | -1.69E-46 |
MS.gene055217 | MS.gene42798 | 0.868241 | 7.56E-66 | -1.69E-46 |
MS.gene055277 | MS.gene42798 | 0.80384 | 2.88E-49 | -1.69E-46 |
MS.gene055369 | MS.gene42798 | 0.865153 | 7.26E-65 | -1.69E-46 |
MS.gene055370 | MS.gene42798 | 0.866598 | 2.54E-65 | -1.69E-46 |
MS.gene055428 | MS.gene42798 | 0.818207 | 2.21E-52 | -1.69E-46 |
MS.gene055488 | MS.gene42798 | -0.812049 | 5.16E-51 | -1.69E-46 |
MS.gene055539 | MS.gene42798 | 0.822706 | 2.05E-53 | -1.69E-46 |
MS.gene05553 | MS.gene42798 | 0.896054 | 5.33E-76 | -1.69E-46 |
MS.gene05556 | MS.gene42798 | 0.806412 | 8.33E-50 | -1.69E-46 |
MS.gene055601 | MS.gene42798 | -0.813857 | 2.07E-51 | -1.69E-46 |
MS.gene05569 | MS.gene42798 | 0.800241 | 1.58E-48 | -1.69E-46 |
MS.gene05594 | MS.gene42798 | 0.84953 | 3.05E-60 | -1.69E-46 |
MS.gene056191 | MS.gene42798 | 0.822765 | 1.99E-53 | -1.69E-46 |
MS.gene056330 | MS.gene42798 | -0.818154 | 2.27E-52 | -1.69E-46 |
MS.gene056337 | MS.gene42798 | 0.874309 | 7.47E-68 | -1.69E-46 |
MS.gene056351 | MS.gene42798 | 0.821056 | 4.95E-53 | -1.69E-46 |
MS.gene056407 | MS.gene42798 | 0.833057 | 6.64E-56 | -1.69E-46 |
MS.gene056451 | MS.gene42798 | 0.836757 | 7.76E-57 | -1.69E-46 |
MS.gene056513 | MS.gene42798 | 0.805433 | 1.34E-49 | -1.69E-46 |
MS.gene056514 | MS.gene42798 | 0.852887 | 3.44E-61 | -1.69E-46 |
MS.gene056612 | MS.gene42798 | 0.81258 | 3.95E-51 | -1.69E-46 |
MS.gene056633 | MS.gene42798 | 0.869437 | 3.10E-66 | -1.69E-46 |
MS.gene056659 | MS.gene42798 | 0.844766 | 6.17E-59 | -1.69E-46 |
MS.gene056664 | MS.gene42798 | 0.801571 | 8.46E-49 | -1.69E-46 |
MS.gene056723 | MS.gene42798 | 0.860506 | 1.97E-63 | -1.69E-46 |
MS.gene056782 | MS.gene42798 | 0.815243 | 1.02E-51 | -1.69E-46 |
MS.gene056877 | MS.gene42798 | 0.802654 | 5.06E-49 | -1.69E-46 |
MS.gene056899 | MS.gene42798 | -0.855609 | 5.63E-62 | -1.69E-46 |
MS.gene056920 | MS.gene42798 | -0.807293 | 5.43E-50 | -1.69E-46 |
MS.gene056979 | MS.gene42798 | 0.814283 | 1.67E-51 | -1.69E-46 |
MS.gene05702 | MS.gene42798 | 0.854285 | 1.36E-61 | -1.69E-46 |
MS.gene057048 | MS.gene42798 | 0.802388 | 5.75E-49 | -1.69E-46 |
MS.gene057121 | MS.gene42798 | 0.800147 | 1.65E-48 | -1.69E-46 |
MS.gene057124 | MS.gene42798 | 0.815929 | 7.19E-52 | -1.69E-46 |
MS.gene057196 | MS.gene42798 | 0.813888 | 2.04E-51 | -1.69E-46 |
MS.gene057310 | MS.gene42798 | 0.809873 | 1.53E-50 | -1.69E-46 |
MS.gene057396 | MS.gene42798 | 0.817177 | 3.77E-52 | -1.69E-46 |
MS.gene057476 | MS.gene42798 | 0.86538 | 6.16E-65 | -1.69E-46 |
MS.gene057749 | MS.gene42798 | 0.862595 | 4.53E-64 | -1.69E-46 |
MS.gene057823 | MS.gene42798 | 0.853203 | 2.79E-61 | -1.69E-46 |
MS.gene057825 | MS.gene42798 | 0.845281 | 4.48E-59 | -1.69E-46 |
MS.gene057833 | MS.gene42798 | 0.823318 | 1.48E-53 | -1.69E-46 |
MS.gene057843 | MS.gene42798 | 0.823008 | 1.75E-53 | -1.69E-46 |
MS.gene057888 | MS.gene42798 | 0.857547 | 1.51E-62 | -1.69E-46 |
MS.gene058002 | MS.gene42798 | 0.840066 | 1.09E-57 | -1.69E-46 |
MS.gene058007 | MS.gene42798 | 0.807148 | 5.82E-50 | -1.69E-46 |
MS.gene05811 | MS.gene42798 | 0.818541 | 1.86E-52 | -1.69E-46 |
MS.gene058142 | MS.gene42798 | 0.853315 | 2.59E-61 | -1.69E-46 |
MS.gene058220 | MS.gene42798 | 0.808845 | 2.53E-50 | -1.69E-46 |
MS.gene058233 | MS.gene42798 | 0.862425 | 5.12E-64 | -1.69E-46 |
MS.gene058276 | MS.gene42798 | 0.837172 | 6.08E-57 | -1.69E-46 |
MS.gene058376 | MS.gene42798 | 0.816196 | 6.27E-52 | -1.69E-46 |
MS.gene058444 | MS.gene42798 | 0.852147 | 5.59E-61 | -1.69E-46 |
MS.gene058700 | MS.gene42798 | 0.82577 | 3.91E-54 | -1.69E-46 |
MS.gene058710 | MS.gene42798 | 0.844096 | 9.34E-59 | -1.69E-46 |
MS.gene058746 | MS.gene42798 | 0.868051 | 8.70E-66 | -1.69E-46 |
MS.gene05886 | MS.gene42798 | 0.860067 | 2.67E-63 | -1.69E-46 |
MS.gene058885 | MS.gene42798 | 0.817175 | 3.78E-52 | -1.69E-46 |
MS.gene059011 | MS.gene42798 | 0.874954 | 4.51E-68 | -1.69E-46 |
MS.gene05907 | MS.gene42798 | 0.843883 | 1.07E-58 | -1.69E-46 |
MS.gene059082 | MS.gene42798 | 0.827819 | 1.27E-54 | -1.69E-46 |
MS.gene059141 | MS.gene42798 | 0.848845 | 4.73E-60 | -1.69E-46 |
MS.gene059247 | MS.gene42798 | 0.843871 | 1.07E-58 | -1.69E-46 |
MS.gene059285 | MS.gene42798 | 0.820338 | 7.23E-53 | -1.69E-46 |
MS.gene059420 | MS.gene42798 | 0.896001 | 5.61E-76 | -1.69E-46 |
MS.gene059462 | MS.gene42798 | 0.835017 | 2.14E-56 | -1.69E-46 |
MS.gene059512 | MS.gene42798 | 0.87597 | 2.02E-68 | -1.69E-46 |
MS.gene059683 | MS.gene42798 | 0.80683 | 6.80E-50 | -1.69E-46 |
MS.gene059688 | MS.gene42798 | 0.819113 | 1.38E-52 | -1.69E-46 |
MS.gene059692 | MS.gene42798 | 0.810831 | 9.48E-51 | -1.69E-46 |
MS.gene059695 | MS.gene42798 | 0.814875 | 1.23E-51 | -1.69E-46 |
MS.gene05984 | MS.gene42798 | 0.825424 | 4.72E-54 | -1.69E-46 |
MS.gene059894 | MS.gene42798 | 0.801932 | 7.13E-49 | -1.69E-46 |
MS.gene060038 | MS.gene42798 | 0.826449 | 2.70E-54 | -1.69E-46 |
MS.gene060087 | MS.gene42798 | -0.806081 | 9.78E-50 | -1.69E-46 |
MS.gene060247 | MS.gene42798 | 0.821357 | 4.21E-53 | -1.69E-46 |
MS.gene060403 | MS.gene42798 | 0.841081 | 5.90E-58 | -1.69E-46 |
MS.gene060407 | MS.gene42798 | 0.829044 | 6.41E-55 | -1.69E-46 |
MS.gene061049 | MS.gene42798 | 0.85993 | 2.94E-63 | -1.69E-46 |
MS.gene061114 | MS.gene42798 | -0.847895 | 8.66E-60 | -1.69E-46 |
MS.gene061154 | MS.gene42798 | 0.852322 | 4.98E-61 | -1.69E-46 |
MS.gene061159 | MS.gene42798 | 0.821761 | 3.40E-53 | -1.69E-46 |
MS.gene061214 | MS.gene42798 | 0.819018 | 1.45E-52 | -1.69E-46 |
MS.gene061215 | MS.gene42798 | 0.817421 | 3.33E-52 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene074164 | MS.gene42798 | PPI |
MS.gene47070 | MS.gene42798 | PPI |
MS.gene55432 | MS.gene42798 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene42798.t1 | MTR_8g011430 | 96.998 | 433 | 13 | 0 | 135 | 567 | 12 | 444 | 0.0 | 874 |
MS.gene42798.t1 | MTR_8g011430 | 44.586 | 157 | 29 | 2 | 22 | 120 | 28 | 184 | 4.59e-25 | 108 |
MS.gene42798.t1 | MTR_8g011370 | 79.137 | 417 | 82 | 2 | 151 | 566 | 23 | 435 | 0.0 | 694 |
MS.gene42798.t1 | MTR_8g011370 | 40.854 | 164 | 34 | 4 | 16 | 120 | 17 | 176 | 8.73e-20 | 94.0 |
MS.gene42798.t1 | MTR_8g011410 | 77.698 | 417 | 88 | 2 | 151 | 566 | 23 | 435 | 0.0 | 675 |
MS.gene42798.t1 | MTR_8g011410 | 39.375 | 160 | 34 | 4 | 20 | 120 | 21 | 176 | 2.40e-17 | 86.3 |
MS.gene42798.t1 | MTR_8g011377 | 66.425 | 414 | 80 | 3 | 150 | 563 | 257 | 611 | 0.0 | 540 |
MS.gene42798.t1 | MTR_8g011377 | 58.719 | 281 | 68 | 3 | 286 | 566 | 14 | 246 | 3.81e-100 | 317 |
MS.gene42798.t1 | MTR_8g011440 | 64.048 | 420 | 111 | 6 | 151 | 563 | 39 | 425 | 3.47e-168 | 509 |
MS.gene42798.t1 | MTR_8g011440 | 71.549 | 355 | 90 | 5 | 170 | 521 | 828 | 1174 | 3.55e-164 | 499 |
MS.gene42798.t1 | MTR_8g011440 | 39.716 | 141 | 43 | 2 | 22 | 120 | 39 | 179 | 1.22e-16 | 84.3 |
MS.gene42798.t1 | MTR_8g011440 | 57.647 | 85 | 27 | 3 | 45 | 120 | 883 | 967 | 6.69e-16 | 82.0 |
MS.gene42798.t1 | MTR_2g067990 | 43.961 | 414 | 227 | 5 | 156 | 566 | 237 | 648 | 4.86e-115 | 365 |
MS.gene42798.t1 | MTR_2g067980 | 43.765 | 409 | 225 | 5 | 157 | 563 | 261 | 666 | 5.50e-111 | 355 |
MS.gene42798.t1 | MTR_5g013130 | 41.832 | 404 | 209 | 12 | 174 | 561 | 40 | 433 | 1.35e-99 | 320 |
MS.gene42798.t1 | MTR_5g013070 | 40.097 | 414 | 221 | 13 | 164 | 561 | 32 | 434 | 1.61e-94 | 306 |
MS.gene42798.t1 | MTR_2g068650 | 38.889 | 414 | 193 | 7 | 156 | 566 | 30 | 386 | 4.73e-93 | 301 |
MS.gene42798.t1 | MTR_2g067970 | 43.077 | 325 | 173 | 8 | 156 | 470 | 196 | 518 | 2.14e-77 | 262 |
MS.gene42798.t1 | MTR_5g006160 | 32.536 | 418 | 244 | 18 | 157 | 564 | 24 | 413 | 2.79e-45 | 171 |
MS.gene42798.t1 | MTR_4g114270 | 32.593 | 405 | 242 | 16 | 174 | 565 | 54 | 440 | 9.28e-43 | 164 |
MS.gene42798.t1 | MTR_4g114250 | 30.266 | 413 | 247 | 16 | 174 | 567 | 54 | 444 | 4.35e-40 | 156 |
MS.gene42798.t1 | MTR_4g114240 | 30.918 | 414 | 240 | 18 | 157 | 546 | 37 | 428 | 1.03e-33 | 137 |
MS.gene42798.t1 | MTR_3g031490 | 27.512 | 418 | 267 | 12 | 162 | 566 | 24 | 418 | 9.13e-32 | 131 |
MS.gene42798.t1 | MTR_1g104555 | 27.532 | 385 | 199 | 13 | 174 | 547 | 13 | 328 | 1.61e-31 | 130 |
MS.gene42798.t1 | MTR_3g031600 | 28.537 | 417 | 266 | 12 | 162 | 566 | 24 | 420 | 3.70e-30 | 126 |
MS.gene42798.t1 | MTR_3g102400 | 27.273 | 418 | 271 | 15 | 160 | 565 | 29 | 425 | 5.65e-30 | 125 |
MS.gene42798.t1 | MTR_3g031640 | 28.744 | 414 | 260 | 12 | 162 | 562 | 24 | 415 | 7.28e-30 | 125 |
MS.gene42798.t1 | MTR_4g114280 | 29.464 | 448 | 249 | 18 | 157 | 561 | 37 | 460 | 5.89e-29 | 122 |
MS.gene42798.t1 | MTR_3g031580 | 28.467 | 411 | 241 | 15 | 173 | 566 | 38 | 412 | 7.60e-29 | 122 |
MS.gene42798.t1 | MTR_3g031610 | 29.017 | 417 | 253 | 12 | 162 | 562 | 24 | 413 | 1.02e-28 | 121 |
MS.gene42798.t1 | MTR_3g031480 | 29.111 | 371 | 236 | 12 | 162 | 524 | 27 | 378 | 2.12e-27 | 117 |
MS.gene42798.t1 | MTR_7g092050 | 28.205 | 390 | 233 | 16 | 174 | 552 | 45 | 398 | 6.45e-26 | 113 |
MS.gene42798.t1 | MTR_3g031470 | 27.614 | 373 | 226 | 10 | 173 | 525 | 37 | 385 | 6.50e-26 | 113 |
MS.gene42798.t1 | MTR_1g099400 | 25.670 | 448 | 272 | 19 | 155 | 563 | 13 | 438 | 1.49e-25 | 112 |
MS.gene42798.t1 | MTR_3g031500 | 28.767 | 365 | 218 | 13 | 211 | 566 | 2 | 333 | 6.27e-21 | 97.4 |
MS.gene42798.t1 | MTR_4g094858 | 24.661 | 442 | 283 | 17 | 142 | 564 | 11 | 421 | 5.24e-20 | 94.7 |
MS.gene42798.t1 | MTR_7g058550 | 26.044 | 407 | 258 | 16 | 173 | 564 | 43 | 421 | 8.02e-20 | 94.0 |
MS.gene42798.t1 | MTR_2g089360 | 25.990 | 404 | 234 | 17 | 151 | 525 | 24 | 391 | 1.59e-19 | 93.2 |
MS.gene42798.t1 | MTR_7g058530 | 24.631 | 406 | 261 | 12 | 173 | 562 | 44 | 420 | 5.73e-19 | 91.3 |
MS.gene42798.t1 | MTR_4g081650 | 26.171 | 363 | 228 | 14 | 175 | 524 | 42 | 377 | 9.00e-19 | 90.9 |
MS.gene42798.t1 | MTR_7g053050 | 23.963 | 434 | 286 | 17 | 147 | 564 | 16 | 421 | 1.76e-18 | 89.7 |
MS.gene42798.t1 | MTR_7g058830 | 23.944 | 426 | 280 | 16 | 155 | 564 | 25 | 422 | 2.36e-18 | 89.4 |
MS.gene42798.t1 | MTR_8g465580 | 27.441 | 379 | 215 | 17 | 173 | 525 | 39 | 383 | 1.14e-17 | 87.0 |
MS.gene42798.t1 | MTR_3g107070 | 27.446 | 368 | 218 | 18 | 172 | 530 | 33 | 360 | 1.26e-17 | 87.0 |
MS.gene42798.t1 | MTR_2g011170 | 26.053 | 380 | 219 | 18 | 173 | 525 | 38 | 382 | 1.27e-16 | 83.6 |
MS.gene42798.t1 | MTR_0280s0040 | 23.896 | 385 | 236 | 14 | 173 | 529 | 42 | 397 | 1.98e-16 | 83.2 |
MS.gene42798.t1 | MTR_5g013050 | 36.893 | 103 | 58 | 3 | 353 | 449 | 55 | 156 | 2.41e-16 | 77.0 |
MS.gene42798.t1 | MTR_2g011170 | 26.053 | 380 | 219 | 18 | 173 | 525 | 38 | 382 | 2.45e-16 | 83.2 |
MS.gene42798.t1 | MTR_8g465410 | 27.154 | 383 | 211 | 17 | 173 | 525 | 39 | 383 | 6.18e-16 | 81.6 |
MS.gene42798.t1 | MTR_2g011210 | 25.123 | 406 | 252 | 16 | 150 | 535 | 27 | 400 | 1.04e-15 | 81.3 |
MS.gene42798.t1 | MTR_4g081750 | 25.205 | 365 | 233 | 13 | 173 | 524 | 40 | 377 | 1.89e-15 | 80.5 |
MS.gene42798.t1 | MTR_2g011160 | 26.221 | 389 | 232 | 18 | 161 | 526 | 27 | 383 | 2.56e-15 | 79.7 |
MS.gene42798.t1 | MTR_2g011160 | 25.806 | 434 | 262 | 20 | 161 | 567 | 27 | 427 | 3.18e-15 | 79.7 |
MS.gene42798.t1 | MTR_2g011150 | 24.668 | 377 | 223 | 16 | 173 | 524 | 43 | 383 | 3.56e-15 | 79.3 |
MS.gene42798.t1 | MTR_4g091760 | 27.763 | 389 | 229 | 18 | 173 | 534 | 39 | 402 | 3.56e-15 | 79.3 |
MS.gene42798.t1 | MTR_3g020230 | 25.132 | 378 | 225 | 17 | 173 | 526 | 44 | 387 | 6.27e-15 | 78.6 |
MS.gene42798.t1 | MTR_4g081665 | 24.725 | 364 | 237 | 12 | 173 | 524 | 39 | 377 | 6.75e-15 | 78.6 |
MS.gene42798.t1 | MTR_2g011190 | 25.984 | 381 | 233 | 15 | 173 | 535 | 45 | 394 | 7.75e-15 | 78.2 |
MS.gene42798.t1 | MTR_3g051420 | 23.869 | 398 | 242 | 16 | 150 | 525 | 27 | 385 | 1.11e-14 | 77.8 |
MS.gene42798.t1 | MTR_8g465990 | 25.781 | 384 | 246 | 13 | 156 | 525 | 29 | 387 | 1.43e-14 | 77.0 |
MS.gene42798.t1 | MTR_8g465990 | 25.581 | 387 | 252 | 13 | 154 | 525 | 22 | 387 | 2.03e-14 | 77.0 |
MS.gene42798.t1 | MTR_8g465990 | 25.581 | 387 | 252 | 13 | 154 | 525 | 22 | 387 | 2.31e-14 | 76.6 |
MS.gene42798.t1 | MTR_8g465470 | 23.387 | 372 | 238 | 13 | 173 | 525 | 71 | 414 | 2.58e-14 | 76.6 |
MS.gene42798.t1 | MTR_2g011280 | 23.557 | 433 | 258 | 19 | 174 | 567 | 45 | 443 | 4.72e-14 | 75.9 |
MS.gene42798.t1 | MTR_2g081470 | 26.768 | 396 | 232 | 17 | 151 | 525 | 20 | 378 | 9.96e-14 | 74.7 |
MS.gene42798.t1 | MTR_2g089440 | 23.861 | 373 | 235 | 13 | 180 | 529 | 52 | 398 | 1.30e-13 | 74.3 |
MS.gene42798.t1 | MTR_3g007510 | 27.013 | 385 | 219 | 21 | 173 | 524 | 40 | 395 | 1.36e-13 | 74.3 |
MS.gene42798.t1 | MTR_4g091680 | 28.351 | 388 | 210 | 21 | 173 | 534 | 63 | 408 | 1.40e-13 | 74.3 |
MS.gene42798.t1 | MTR_3g007510 | 27.013 | 385 | 219 | 21 | 173 | 524 | 40 | 395 | 1.52e-13 | 74.3 |
MS.gene42798.t1 | MTR_3g007510 | 27.013 | 385 | 219 | 21 | 173 | 524 | 40 | 395 | 1.68e-13 | 73.9 |
MS.gene42798.t1 | MTR_1g012550 | 27.056 | 377 | 208 | 19 | 172 | 530 | 57 | 384 | 1.72e-13 | 73.9 |
MS.gene42798.t1 | MTR_3g019420 | 23.360 | 381 | 226 | 15 | 173 | 525 | 41 | 383 | 2.00e-13 | 73.9 |
MS.gene42798.t1 | MTR_7g056420 | 23.111 | 450 | 281 | 19 | 149 | 563 | 355 | 774 | 2.28e-13 | 73.9 |
MS.gene42798.t1 | MTR_8g465570 | 25.581 | 301 | 188 | 10 | 173 | 459 | 40 | 318 | 2.37e-13 | 73.6 |
MS.gene42798.t1 | MTR_2g011340 | 24.235 | 425 | 252 | 21 | 180 | 566 | 53 | 445 | 2.53e-13 | 73.6 |
MS.gene42798.t1 | MTR_0090s0020 | 25.132 | 378 | 248 | 15 | 161 | 525 | 25 | 380 | 2.69e-13 | 73.2 |
MS.gene42798.t1 | MTR_3g019580 | 24.865 | 370 | 233 | 14 | 173 | 525 | 57 | 398 | 2.97e-13 | 73.2 |
MS.gene42798.t1 | MTR_7g056430 | 23.111 | 450 | 281 | 19 | 149 | 563 | 355 | 774 | 3.05e-13 | 73.6 |
MS.gene42798.t1 | MTR_3g019580 | 24.865 | 370 | 233 | 14 | 173 | 525 | 57 | 398 | 3.40e-13 | 72.8 |
MS.gene42798.t1 | MTR_3g020320 | 24.021 | 383 | 221 | 16 | 173 | 525 | 44 | 386 | 3.75e-13 | 72.8 |
MS.gene42798.t1 | MTR_0090s0020 | 25.132 | 378 | 248 | 15 | 161 | 525 | 25 | 380 | 3.95e-13 | 72.8 |
MS.gene42798.t1 | MTR_5g067290 | 25.538 | 372 | 223 | 15 | 173 | 529 | 45 | 377 | 4.54e-13 | 71.6 |
MS.gene42798.t1 | MTR_0090s0020 | 25.132 | 378 | 248 | 15 | 161 | 525 | 25 | 380 | 4.63e-13 | 72.4 |
MS.gene42798.t1 | MTR_2g081500 | 26.738 | 374 | 220 | 17 | 173 | 525 | 41 | 381 | 5.17e-13 | 72.4 |
MS.gene42798.t1 | MTR_2g011270 | 24.672 | 381 | 236 | 15 | 180 | 535 | 31 | 385 | 5.42e-13 | 72.4 |
MS.gene42798.t1 | MTR_4g091690 | 27.070 | 314 | 185 | 14 | 173 | 464 | 61 | 352 | 5.54e-13 | 72.4 |
MS.gene42798.t1 | MTR_0090s0020 | 25.132 | 378 | 248 | 15 | 161 | 525 | 25 | 380 | 5.85e-13 | 72.0 |
MS.gene42798.t1 | MTR_2g080080 | 26.161 | 409 | 239 | 21 | 170 | 563 | 53 | 413 | 1.56e-12 | 70.9 |
MS.gene42798.t1 | MTR_3g019490 | 23.325 | 403 | 232 | 16 | 156 | 525 | 22 | 380 | 2.60e-12 | 70.1 |
MS.gene42798.t1 | MTR_8g013610 | 31.361 | 169 | 101 | 7 | 158 | 314 | 28 | 193 | 3.38e-12 | 69.7 |
MS.gene42798.t1 | MTR_2g081520 | 24.599 | 374 | 228 | 16 | 173 | 525 | 38 | 378 | 3.60e-12 | 69.7 |
MS.gene42798.t1 | MTR_3g020280 | 22.340 | 376 | 237 | 13 | 173 | 524 | 41 | 385 | 3.72e-12 | 69.7 |
MS.gene42798.t1 | MTR_4g081655 | 24.804 | 383 | 226 | 18 | 173 | 525 | 39 | 389 | 3.80e-12 | 69.7 |
MS.gene42798.t1 | MTR_4g081655 | 24.804 | 383 | 226 | 18 | 173 | 525 | 74 | 424 | 3.84e-12 | 69.7 |
MS.gene42798.t1 | MTR_2g081520 | 24.599 | 374 | 228 | 16 | 173 | 525 | 38 | 378 | 3.87e-12 | 69.3 |
MS.gene42798.t1 | MTR_2g081520 | 24.599 | 374 | 228 | 16 | 173 | 525 | 38 | 378 | 3.96e-12 | 69.3 |
MS.gene42798.t1 | MTR_2g081520 | 24.599 | 374 | 228 | 16 | 173 | 525 | 38 | 378 | 4.10e-12 | 69.7 |
MS.gene42798.t1 | MTR_2g081520 | 24.599 | 374 | 228 | 16 | 173 | 525 | 38 | 378 | 4.32e-12 | 69.3 |
MS.gene42798.t1 | MTR_2g089290 | 31.492 | 181 | 111 | 6 | 155 | 325 | 26 | 203 | 4.49e-12 | 69.7 |
MS.gene42798.t1 | MTR_2g081520 | 24.599 | 374 | 228 | 16 | 173 | 525 | 38 | 378 | 5.22e-12 | 68.9 |
MS.gene42798.t1 | MTR_4g081655 | 24.804 | 383 | 226 | 18 | 173 | 525 | 74 | 424 | 5.48e-12 | 69.3 |
MS.gene42798.t1 | MTR_2g103810 | 26.225 | 408 | 236 | 19 | 172 | 560 | 51 | 412 | 5.64e-12 | 69.3 |
MS.gene42798.t1 | MTR_7g058860 | 23.716 | 409 | 266 | 18 | 173 | 564 | 42 | 421 | 7.40e-12 | 68.9 |
MS.gene42798.t1 | MTR_8g465980 | 24.679 | 389 | 243 | 16 | 155 | 525 | 21 | 377 | 7.47e-12 | 68.9 |
MS.gene42798.t1 | MTR_8g013560 | 31.361 | 169 | 101 | 7 | 158 | 314 | 27 | 192 | 1.01e-11 | 68.2 |
MS.gene42798.t1 | MTR_4g091840 | 25.840 | 387 | 217 | 19 | 173 | 525 | 56 | 406 | 1.17e-11 | 68.2 |
MS.gene42798.t1 | MTR_7g056663 | 22.603 | 438 | 278 | 20 | 157 | 563 | 25 | 432 | 2.21e-11 | 67.4 |
MS.gene42798.t1 | MTR_3g019530 | 23.747 | 379 | 224 | 14 | 173 | 525 | 44 | 383 | 2.34e-11 | 67.0 |
MS.gene42798.t1 | MTR_3g019530 | 23.747 | 379 | 224 | 14 | 173 | 525 | 44 | 383 | 2.69e-11 | 66.6 |
MS.gene42798.t1 | MTR_3g019530 | 23.747 | 379 | 224 | 14 | 173 | 525 | 44 | 383 | 2.90e-11 | 67.0 |
MS.gene42798.t1 | MTR_3g019530 | 23.747 | 379 | 224 | 14 | 173 | 525 | 44 | 383 | 2.92e-11 | 67.0 |
MS.gene42798.t1 | MTR_3g019530 | 23.747 | 379 | 224 | 14 | 173 | 525 | 44 | 383 | 2.97e-11 | 67.0 |
MS.gene42798.t1 | MTR_3g007630 | 26.702 | 382 | 223 | 21 | 173 | 524 | 41 | 395 | 3.44e-11 | 66.6 |
MS.gene42798.t1 | MTR_2g080100 | 23.636 | 385 | 216 | 18 | 170 | 530 | 54 | 384 | 4.56e-11 | 66.2 |
MS.gene42798.t1 | MTR_8g013580 | 29.139 | 151 | 96 | 4 | 173 | 314 | 51 | 199 | 4.64e-11 | 66.2 |
MS.gene42798.t1 | MTR_2g080090 | 24.802 | 379 | 219 | 20 | 170 | 530 | 53 | 383 | 5.93e-11 | 65.9 |
MS.gene42798.t1 | MTR_2g076590 | 25.507 | 345 | 217 | 15 | 208 | 536 | 93 | 413 | 6.56e-11 | 65.1 |
MS.gene42798.t1 | MTR_3g072800 | 28.621 | 290 | 171 | 14 | 159 | 436 | 28 | 293 | 7.92e-11 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene42798.t1 | AT5G60900 | 45.122 | 246 | 116 | 9 | 156 | 386 | 31 | 272 | 4.22e-52 | 181 |
MS.gene42798.t1 | AT5G24080 | 27.438 | 441 | 269 | 20 | 153 | 561 | 26 | 447 | 4.50e-29 | 123 |
MS.gene42798.t1 | AT2G41890 | 27.604 | 384 | 242 | 14 | 155 | 529 | 24 | 380 | 1.10e-17 | 87.4 |
MS.gene42798.t1 | AT3G12000 | 26.178 | 382 | 239 | 13 | 164 | 525 | 40 | 398 | 1.96e-17 | 85.5 |
MS.gene42798.t1 | AT1G65790 | 24.682 | 393 | 239 | 13 | 155 | 526 | 28 | 384 | 1.99e-17 | 86.3 |
MS.gene42798.t1 | AT1G65790 | 24.682 | 393 | 239 | 13 | 155 | 526 | 28 | 384 | 1.99e-17 | 86.3 |
MS.gene42798.t1 | AT1G34300 | 24.936 | 393 | 247 | 16 | 155 | 539 | 25 | 377 | 3.49e-17 | 85.9 |
MS.gene42798.t1 | AT1G65790 | 25.255 | 392 | 236 | 13 | 155 | 525 | 28 | 383 | 3.96e-17 | 85.5 |
MS.gene42798.t1 | AT1G11340 | 27.154 | 383 | 211 | 18 | 173 | 524 | 34 | 379 | 2.13e-16 | 83.2 |
MS.gene42798.t1 | AT1G11330 | 25.897 | 390 | 246 | 15 | 168 | 535 | 42 | 410 | 2.53e-16 | 83.2 |
MS.gene42798.t1 | AT1G11330 | 25.897 | 390 | 246 | 15 | 168 | 535 | 42 | 410 | 2.74e-16 | 83.2 |
MS.gene42798.t1 | AT4G21390 | 25.000 | 416 | 257 | 15 | 151 | 540 | 23 | 409 | 3.44e-16 | 82.4 |
MS.gene42798.t1 | AT1G11330 | 25.897 | 390 | 246 | 15 | 168 | 535 | 42 | 410 | 3.55e-16 | 82.4 |
MS.gene42798.t1 | AT4G21390 | 25.000 | 416 | 257 | 15 | 151 | 540 | 23 | 409 | 3.70e-16 | 82.4 |
MS.gene42798.t1 | AT1G11340 | 27.154 | 383 | 211 | 18 | 173 | 524 | 102 | 447 | 5.17e-16 | 82.0 |
MS.gene42798.t1 | AT1G11340 | 27.415 | 383 | 210 | 19 | 173 | 524 | 102 | 447 | 5.36e-16 | 82.0 |
MS.gene42798.t1 | AT1G11410 | 24.865 | 370 | 236 | 16 | 173 | 524 | 44 | 389 | 7.38e-15 | 78.6 |
MS.gene42798.t1 | AT1G11410 | 24.865 | 370 | 236 | 16 | 173 | 524 | 37 | 382 | 7.81e-15 | 78.6 |
MS.gene42798.t1 | AT1G11410 | 24.865 | 370 | 236 | 16 | 173 | 524 | 13 | 358 | 8.75e-15 | 78.2 |
MS.gene42798.t1 | AT1G11300 | 23.869 | 398 | 249 | 16 | 163 | 535 | 32 | 400 | 8.94e-14 | 75.1 |
MS.gene42798.t1 | AT1G11300 | 23.869 | 398 | 249 | 16 | 163 | 535 | 32 | 400 | 1.06e-13 | 74.7 |
MS.gene42798.t1 | AT4G21380 | 22.194 | 392 | 258 | 13 | 153 | 526 | 28 | 390 | 1.26e-13 | 74.3 |
MS.gene42798.t1 | AT1G78860 | 23.280 | 378 | 247 | 15 | 183 | 536 | 52 | 410 | 2.11e-13 | 72.8 |
MS.gene42798.t1 | AT4G21380 | 22.251 | 391 | 257 | 13 | 153 | 525 | 28 | 389 | 2.41e-13 | 73.6 |
MS.gene42798.t1 | AT1G65800 | 24.935 | 385 | 228 | 17 | 168 | 526 | 39 | 388 | 2.61e-13 | 73.2 |
MS.gene42798.t1 | AT1G78850 | 23.607 | 377 | 247 | 15 | 183 | 536 | 52 | 410 | 2.84e-13 | 72.4 |
MS.gene42798.t1 | AT1G65800 | 25.000 | 384 | 227 | 17 | 168 | 525 | 39 | 387 | 3.46e-13 | 73.2 |
MS.gene42798.t1 | AT1G11303 | 24.038 | 416 | 238 | 16 | 163 | 540 | 32 | 407 | 7.55e-13 | 72.0 |
MS.gene42798.t1 | AT1G16905 | 24.528 | 371 | 214 | 16 | 191 | 536 | 69 | 398 | 3.49e-12 | 68.9 |
MS.gene42798.t1 | AT4G03230 | 23.393 | 389 | 243 | 16 | 195 | 560 | 68 | 424 | 5.58e-12 | 69.3 |
MS.gene42798.t1 | AT4G03230 | 23.393 | 389 | 243 | 16 | 195 | 560 | 68 | 424 | 9.78e-12 | 68.6 |
MS.gene42798.t1 | AT4G03230 | 23.393 | 389 | 243 | 16 | 195 | 560 | 68 | 424 | 9.78e-12 | 68.6 |
MS.gene42798.t1 | AT1G61400 | 24.165 | 389 | 244 | 14 | 173 | 540 | 48 | 406 | 1.36e-11 | 68.2 |
MS.gene42798.t1 | AT1G61380 | 23.155 | 393 | 249 | 17 | 173 | 540 | 35 | 399 | 1.43e-11 | 67.8 |
MS.gene42798.t1 | AT1G11350 | 25.882 | 425 | 212 | 21 | 162 | 535 | 26 | 398 | 1.75e-11 | 67.8 |
MS.gene42798.t1 | AT1G61400 | 24.165 | 389 | 244 | 14 | 173 | 540 | 48 | 406 | 1.78e-11 | 67.8 |
MS.gene42798.t1 | AT1G61550 | 22.384 | 411 | 265 | 14 | 155 | 540 | 10 | 391 | 2.05e-11 | 67.4 |
MS.gene42798.t1 | AT4G32300 | 33.858 | 127 | 78 | 3 | 172 | 297 | 47 | 168 | 4.21e-11 | 66.2 |
MS.gene42798.t1 | AT5G24080 | 24.629 | 337 | 206 | 17 | 256 | 561 | 1 | 320 | 6.19e-11 | 65.9 |
MS.gene42798.t1 | AT5G24080 | 24.629 | 337 | 206 | 17 | 256 | 561 | 1 | 320 | 6.19e-11 | 65.9 |
Find 127 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCATGGTTGCTTTCACCTTC+TGG | 0.162410 | 8.2:+80576099 | MS.gene42798:CDS |
GTCAGGGTACTTGTATGTTT+TGG | 0.212495 | 8.2:+80576656 | MS.gene42798:CDS |
CTACACTGCTCTTCAGTAAA+AGG | 0.260924 | 8.2:-80577110 | None:intergenic |
ATGGTGAACTTAACAGTCTT+TGG | 0.262148 | 8.2:+80574152 | MS.gene42798:CDS |
TGGCATCATTGGGACGAAAA+TGG | 0.262828 | 8.2:+80574998 | MS.gene42798:CDS |
ACCAATCGCTATAGTGCTTT+TGG | 0.264293 | 8.2:-80573871 | None:intergenic |
ACCAATGGCTATGGTACTTT+TGG | 0.266017 | 8.2:-80576046 | None:intergenic |
AGTATAAGTACATATATTAA+AGG | 0.280779 | 8.2:-80576841 | None:intergenic |
CCTTCTGGTGACTTTGCCTT+TGG | 0.284286 | 8.2:+80576114 | MS.gene42798:CDS |
CAGCTTCCATATGGATCATT+AGG | 0.288789 | 8.2:-80576966 | None:intergenic |
GCAAAGAAGGTTGGCATCAT+TGG | 0.289158 | 8.2:+80574987 | MS.gene42798:CDS |
TCAATCAGTGAGTAATGTTT+TGG | 0.296727 | 8.2:-80576942 | None:intergenic |
CCTTCTCAAGTTGTGGATAA+AGG | 0.297314 | 8.2:+80576441 | MS.gene42798:CDS |
CACTGGCAACTTTGTGCTTC+AGG | 0.298549 | 8.2:+80576362 | MS.gene42798:CDS |
ACCTTCTTTGCCACGCCGTC+CGG | 0.308246 | 8.2:-80574975 | None:intergenic |
TCACTCTTAGTTGAACTCTT+AGG | 0.318025 | 8.2:-80576792 | None:intergenic |
TCCATAACCTGACACCATTT+GGG | 0.321032 | 8.2:-80576293 | None:intergenic |
AAAGCTTTCTTCAAGGCTTA+AGG | 0.324891 | 8.2:+80576467 | MS.gene42798:CDS |
CCCCAAATGGTGTCAGGTTA+TGG | 0.333819 | 8.2:+80576292 | MS.gene42798:CDS |
TTCCATAACCTGACACCATT+TGG | 0.334304 | 8.2:-80576294 | None:intergenic |
TATAATAGCTTCTGCACTTT+GGG | 0.334674 | 8.2:+80576891 | MS.gene42798:CDS |
GCACATCCTTGGATGAAATC+TGG | 0.356014 | 8.2:-80576993 | None:intergenic |
TTCCATAGCATGTCACCATT+TGG | 0.368612 | 8.2:-80574061 | None:intergenic |
CACAACTTGAGAAGGCAATA+AGG | 0.378374 | 8.2:-80576433 | None:intergenic |
GATCATCTTCTGCACATCCT+TGG | 0.382950 | 8.2:-80577004 | None:intergenic |
CATTCTATTAATTTACCATC+TGG | 0.385953 | 8.2:+80576552 | MS.gene42798:CDS |
TGACGCCTTCTTGCCTTCTC+AGG | 0.401906 | 8.2:+80574195 | MS.gene42798:CDS |
AAGAAGTTACCACTCTCAAA+TGG | 0.410332 | 8.2:+80577200 | MS.gene42798:CDS |
AAGGAAGAAAGCTTTCTTCA+AGG | 0.414940 | 8.2:+80576460 | MS.gene42798:CDS |
TGGTGAACTTAACAGTCTTT+GGG | 0.415246 | 8.2:+80574153 | MS.gene42798:CDS |
TTTGCCACGCCGTCCGGCGC+CGG | 0.418418 | 8.2:-80574969 | None:intergenic |
ATCAAGTGCTGGAGCTCAAT+TGG | 0.420184 | 8.2:+80576623 | MS.gene42798:CDS |
GGCATCATTGGGACGAAAAT+GGG | 0.421626 | 8.2:+80574999 | MS.gene42798:CDS |
AGAGTTGATGCAACTCTTAA+TGG | 0.425621 | 8.2:+80577224 | MS.gene42798:CDS |
AGCTCCAGCACTTGATGTAC+TGG | 0.427066 | 8.2:-80576616 | None:intergenic |
CTCCAAATGGTGACATGCTA+TGG | 0.432332 | 8.2:+80574059 | MS.gene42798:CDS |
TCAGGTTAGGTGATAGTTGT+TGG | 0.437474 | 8.2:+80577174 | MS.gene42798:CDS |
ACTCTATCACCAAGCCCCTC+AGG | 0.442069 | 8.2:-80574085 | None:intergenic |
CAAAGAAGGTTGGCATCATT+GGG | 0.442108 | 8.2:+80574988 | MS.gene42798:CDS |
TCTGGCTTGCAGCTTCCATA+TGG | 0.442901 | 8.2:-80576975 | None:intergenic |
ATTGATCCTAATGATCCATA+TGG | 0.445850 | 8.2:+80576960 | MS.gene42798:CDS |
CAATTGGTCTTTGACAAGTC+AGG | 0.449002 | 8.2:+80576639 | MS.gene42798:CDS |
GTGGAACTCACTGCCAATGA+TGG | 0.454151 | 8.2:+80576255 | MS.gene42798:CDS |
GAATCAGTGAGTAGAGGAGA+AGG | 0.455286 | 8.2:-80573821 | None:intergenic |
AAAGAGACTAATTTCAGTAA+AGG | 0.455417 | 8.2:+80574232 | MS.gene42798:CDS |
CTTATTGCCTTCTCAAGTTG+TGG | 0.458043 | 8.2:+80576434 | MS.gene42798:CDS |
ACTGTTGTGTGGTATGCTAA+TGG | 0.458658 | 8.2:+80576204 | MS.gene42798:CDS |
TGCCTTCTCAGGTTGTTGAA+AGG | 0.468344 | 8.2:+80574206 | MS.gene42798:CDS |
GTGAAGGTTGGACCACAGTA+TGG | 0.468347 | 8.2:+80576811 | MS.gene42798:CDS |
CTATGGAACCCTGAGGGGCT+TGG | 0.468655 | 8.2:+80574076 | MS.gene42798:CDS |
GTGGCCGGCGCCGGACGGCG+TGG | 0.473100 | 8.2:+80574965 | MS.gene42798:intron |
ATCAGTGAGTAGAGGAGAAG+GGG | 0.473970 | 8.2:-80573819 | None:intergenic |
CTGGTGCTAGCTTCTCCAAA+TGG | 0.475850 | 8.2:+80574046 | MS.gene42798:intron |
AAGGAGACAGATTTCAGTAA+AGG | 0.482797 | 8.2:+80576486 | MS.gene42798:CDS |
AATCAGTGAGTAGAGGAGAA+GGG | 0.485968 | 8.2:-80573820 | None:intergenic |
ATGCAGTGGCCGGCGCCGGA+CGG | 0.487154 | 8.2:+80574960 | MS.gene42798:intron |
ATATAATAGCTTCTGCACTT+TGG | 0.487312 | 8.2:+80576890 | MS.gene42798:CDS |
GTATAAGTACATATATTAAA+GGG | 0.488197 | 8.2:-80576840 | None:intergenic |
GCCGGACGGCGTGGCAAAGA+AGG | 0.490441 | 8.2:+80574974 | MS.gene42798:CDS |
CCTTTATCCACAACTTGAGA+AGG | 0.492964 | 8.2:-80576441 | None:intergenic |
AGAGACTCACCCTGTCGTCT+TGG | 0.497938 | 8.2:-80575042 | None:intergenic |
AGTTAGCACCAACCCATCAT+TGG | 0.498106 | 8.2:-80576268 | None:intergenic |
AGGTATGCAGTGGCCGGCGC+CGG | 0.501976 | 8.2:+80574956 | MS.gene42798:intron |
GAGGAGAAGGGGAAGTAGAG+AGG | 0.502798 | 8.2:-80573808 | None:intergenic |
GCAGTGTAGGAAATCTTGTA+TGG | 0.504417 | 8.2:+80577124 | MS.gene42798:CDS |
TGAAGTGGCTCCAAGACGAC+AGG | 0.508441 | 8.2:+80575032 | MS.gene42798:CDS |
GGATGATTGTTTGTGTTCTG+TGG | 0.510059 | 8.2:+80577145 | MS.gene42798:CDS |
AAAAGAATCACCAATGGCTA+TGG | 0.516781 | 8.2:-80576055 | None:intergenic |
AGTGCAGGTAGTGGTGTTTG+TGG | 0.518931 | 8.2:+80576867 | MS.gene42798:CDS |
AGAAGTTACCACTCTCAAAT+GGG | 0.519368 | 8.2:+80577201 | MS.gene42798:CDS |
TAACTTCCCCAAATGGTGTC+AGG | 0.521731 | 8.2:+80576286 | MS.gene42798:CDS |
TATCAGATTATGTGCTTCAA+AGG | 0.523234 | 8.2:+80577087 | MS.gene42798:CDS |
TGCAACTCTTAATGGTGCTA+AGG | 0.523300 | 8.2:+80577232 | MS.gene42798:CDS |
AGATGAAAACAACCATGAAA+AGG | 0.524867 | 8.2:-80573919 | None:intergenic |
TTGGTGCTAACTTCCCCAAA+TGG | 0.527112 | 8.2:+80576279 | MS.gene42798:CDS |
TGTGGTGTGTTCAATGACAT+TGG | 0.533191 | 8.2:+80574112 | MS.gene42798:CDS |
AGCCTTTCAACAACCTGAGA+AGG | 0.536142 | 8.2:-80574208 | None:intergenic |
TGAAGCACATAATCTGATAG+AGG | 0.536988 | 8.2:-80577083 | None:intergenic |
CATTGGAAACTCTGTGCTTG+AGG | 0.537589 | 8.2:+80574129 | MS.gene42798:CDS |
AGACAGATTTCAGTAAAGGA+AGG | 0.543432 | 8.2:+80576490 | MS.gene42798:CDS |
GGTTTGAGCTACAACACTGA+TGG | 0.545146 | 8.2:-80573850 | None:intergenic |
AAATCCAGTACATCAAGTGC+TGG | 0.547246 | 8.2:+80576612 | MS.gene42798:CDS |
GGAGACAGTCCTGCACCAAA+AGG | 0.549672 | 8.2:+80576225 | MS.gene42798:CDS |
AAACAACCATGAAAAGGAGT+TGG | 0.550103 | 8.2:-80573913 | None:intergenic |
ACCAAAAGCACTATAGCGAT+TGG | 0.553243 | 8.2:+80573870 | MS.gene42798:CDS |
ATGGGCGGAAGCTGCTGAAG+TGG | 0.562548 | 8.2:+80575017 | MS.gene42798:CDS |
TGCACCAAAAGGATCAAAAG+TGG | 0.563251 | 8.2:+80576236 | MS.gene42798:CDS |
ACCAAAAGTACCATAGCCAT+TGG | 0.565235 | 8.2:+80576045 | MS.gene42798:CDS |
TATACTGTTAGTGCAGGTAG+TGG | 0.565930 | 8.2:+80576858 | MS.gene42798:CDS |
CTCTATCACCAAGCCCCTCA+GGG | 0.566871 | 8.2:-80574084 | None:intergenic |
AAAAGATTAGTGTCTTTGAG+TGG | 0.569176 | 8.2:-80576144 | None:intergenic |
AAGCAACCATGGAGATGTGC+TGG | 0.569700 | 8.2:-80576088 | None:intergenic |
ATGGTAAATTCAACAGTCTG+TGG | 0.569947 | 8.2:+80576385 | MS.gene42798:CDS |
AATTGGTCTTTGACAAGTCA+GGG | 0.572130 | 8.2:+80576640 | MS.gene42798:CDS |
TGCAAGCCAGATTTCATCCA+AGG | 0.573649 | 8.2:+80576987 | MS.gene42798:CDS |
GGAAACTCTGTGCTTGAGGA+TGG | 0.575358 | 8.2:+80574133 | MS.gene42798:CDS |
GACGGCGTGGCAAAGAAGGT+TGG | 0.575721 | 8.2:+80574978 | MS.gene42798:CDS |
GGCAACTTTGTGCTTCAGGA+TGG | 0.577553 | 8.2:+80576366 | MS.gene42798:CDS |
TGTACTTATACTGTTAGTGC+AGG | 0.578443 | 8.2:+80576852 | MS.gene42798:CDS |
CGCGGTGTATTGAATGACAC+TGG | 0.581627 | 8.2:+80576345 | MS.gene42798:CDS |
ATTGAAGAATCAGTGAGTAG+AGG | 0.587377 | 8.2:-80573827 | None:intergenic |
TGGTAAATTCAACAGTCTGT+GGG | 0.591832 | 8.2:+80576386 | MS.gene42798:CDS |
CTTGGTGATAGAGTTTCTTG+TGG | 0.592795 | 8.2:+80574094 | MS.gene42798:CDS |
AGACTAATTTCAGTAAAGGA+AGG | 0.594962 | 8.2:+80574236 | MS.gene42798:CDS |
CACAAGCCAGCACATCTCCA+TGG | 0.597254 | 8.2:+80576082 | MS.gene42798:CDS |
CCAGAAGGTGAAAGCAACCA+TGG | 0.600409 | 8.2:-80576099 | None:intergenic |
GAAGGCAATAAGGTGTCACT+AGG | 0.602021 | 8.2:-80576423 | None:intergenic |
GACATGCTATGGAACCCTGA+GGG | 0.606652 | 8.2:+80574070 | MS.gene42798:CDS |
ACTCACTGCCAATGATGGGT+TGG | 0.610259 | 8.2:+80576260 | MS.gene42798:CDS |
AAGAGTTCAACTAAGAGTGA+AGG | 0.613595 | 8.2:+80576795 | MS.gene42798:CDS |
AACAACCTGAGAAGGCAAGA+AGG | 0.614766 | 8.2:-80574200 | None:intergenic |
GTTCAACTAAGAGTGAAGGT+TGG | 0.619862 | 8.2:+80576799 | MS.gene42798:CDS |
CTCAATGTTAAAGTTTCTCG+CGG | 0.620103 | 8.2:+80576327 | MS.gene42798:CDS |
TTTCCGAGAAAACTGTTGTG+TGG | 0.627609 | 8.2:+80576193 | MS.gene42798:CDS |
TGCAGTAAAAGAATCACCAA+TGG | 0.629150 | 8.2:-80576061 | None:intergenic |
TGGAACTCACTGCCAATGAT+GGG | 0.629211 | 8.2:+80576256 | MS.gene42798:CDS |
GTCAGGTTATGGAATACTGA+AGG | 0.629411 | 8.2:+80576303 | MS.gene42798:CDS |
CCAAAGGCAAAGTCACCAGA+AGG | 0.636933 | 8.2:-80576114 | None:intergenic |
CCATAACCTGACACCATTTG+GGG | 0.639256 | 8.2:-80576292 | None:intergenic |
ATCATTGGGACGAAAATGGG+CGG | 0.651386 | 8.2:+80575002 | MS.gene42798:CDS |
TTTGAGTGGAAGAAAACCAA+AGG | 0.654690 | 8.2:-80576130 | None:intergenic |
TGCTCTAAGATAAAATTGTG+TGG | 0.657315 | 8.2:-80576730 | None:intergenic |
TCAACTCTCCCATTTGAGAG+TGG | 0.665246 | 8.2:-80577209 | None:intergenic |
ACATGCTATGGAACCCTGAG+GGG | 0.673116 | 8.2:+80574071 | MS.gene42798:CDS |
GAAGTGGCTCCAAGACGACA+GGG | 0.680623 | 8.2:+80575033 | MS.gene42798:CDS |
AAAGGGCTTAGACCATACTG+TGG | 0.757626 | 8.2:-80576823 | None:intergenic |
TGACATGCTATGGAACCCTG+AGG | 0.767248 | 8.2:+80574069 | MS.gene42798:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAATCTATAAAATCATA+TGG | + | chr8.2:80575849-80575868 | MS.gene42798:intron | 10.0% |
!!! | TTTTTTGTTAATTTAACATT+TGG | + | chr8.2:80574298-80574317 | MS.gene42798:intron | 10.0% |
!! | AAAAATAATAAACATATAGC+TGG | + | chr8.2:80575627-80575646 | MS.gene42798:intron | 15.0% |
!! | AGTATAAGTACATATATTAA+AGG | - | chr8.2:80576844-80576863 | None:intergenic | 15.0% |
!! | GTATAAGTACATATATTAAA+GGG | - | chr8.2:80576843-80576862 | None:intergenic | 15.0% |
!!! | ACTTTTATTTTCTATGAAAA+AGG | + | chr8.2:80575718-80575737 | MS.gene42798:intron | 15.0% |
!!! | CTTTTATTTTCTATGAAAAA+GGG | + | chr8.2:80575719-80575738 | MS.gene42798:intron | 15.0% |
!! | ATATGATAATATCTGCAAAA+GGG | - | chr8.2:80575075-80575094 | None:intergenic | 20.0% |
!! | ATTAGATAAATATTCCTGTT+TGG | + | chr8.2:80575573-80575592 | MS.gene42798:intron | 20.0% |
!! | TATATGATAATATCTGCAAA+AGG | - | chr8.2:80575076-80575095 | None:intergenic | 20.0% |
!!! | ATACATTACAATTTTGACAT+AGG | - | chr8.2:80575694-80575713 | None:intergenic | 20.0% |
!!! | ATCTTTTTTTGCTTTCAATT+TGG | + | chr8.2:80576160-80576179 | MS.gene42798:CDS | 20.0% |
!!! | TGATTATTGAATATGTTTTC+AGG | - | chr8.2:80575338-80575357 | None:intergenic | 20.0% |
! | AAAGAGACTAATTTCAGTAA+AGG | + | chr8.2:80574232-80574251 | MS.gene42798:CDS | 25.0% |
! | AAATGGAAAGCAAAAAAACA+TGG | - | chr8.2:80573985-80574004 | None:intergenic | 25.0% |
! | AGAAAGACATGTTTATAATG+TGG | - | chr8.2:80575966-80575985 | None:intergenic | 25.0% |
! | ATCACAGAAAATAGGTAATT+AGG | + | chr8.2:80575230-80575249 | MS.gene42798:intron | 25.0% |
! | ATTGATGTTAACATGAGTAT+TGG | - | chr8.2:80575512-80575531 | None:intergenic | 25.0% |
! | CATTCTATTAATTTACCATC+TGG | + | chr8.2:80576552-80576571 | MS.gene42798:CDS | 25.0% |
! | TAACAGACAAAATTAGTGAA+CGG | + | chr8.2:80575167-80575186 | MS.gene42798:intron | 25.0% |
!! | AATTACCTATTTTCTGTGAT+GGG | - | chr8.2:80575230-80575249 | None:intergenic | 25.0% |
!! | AGATCATTTCTCTTTTTACT+TGG | - | chr8.2:80577029-80577048 | None:intergenic | 25.0% |
!! | TAATTACCTATTTTCTGTGA+TGG | - | chr8.2:80575231-80575250 | None:intergenic | 25.0% |
!! | TTTTCATTAACATAACCAGA+TGG | - | chr8.2:80576570-80576589 | None:intergenic | 25.0% |
!!! | ATCGACTTTTTAACTATCTT+AGG | - | chr8.2:80575424-80575443 | None:intergenic | 25.0% |
!!! | ATCTTAGGTTATAGTTTTAC+AGG | - | chr8.2:80575409-80575428 | None:intergenic | 25.0% |
!!! | ATGTTTTTTTGCTTTCCATT+TGG | + | chr8.2:80573984-80574003 | MS.gene42798:intron | 25.0% |
!!! | TCTTAGGTTATAGTTTTACA+GGG | - | chr8.2:80575408-80575427 | None:intergenic | 25.0% |
!!! | TGTTTGCTATAAAAAGCATA+TGG | + | chr8.2:80575928-80575947 | MS.gene42798:intron | 25.0% |
AAAAGATTAGTGTCTTTGAG+TGG | - | chr8.2:80576147-80576166 | None:intergenic | 30.0% | |
AAAGTCGATAACAAAAAGAG+AGG | + | chr8.2:80575435-80575454 | MS.gene42798:intron | 30.0% | |
AAGAGAGGAATTTGTAGATA+TGG | + | chr8.2:80575450-80575469 | MS.gene42798:intron | 30.0% | |
AATTTACTGATACCAAATCC+AGG | - | chr8.2:80575479-80575498 | None:intergenic | 30.0% | |
AATTTGTAGATATGGTTACC+TGG | + | chr8.2:80575458-80575477 | MS.gene42798:intron | 30.0% | |
AGAAATGTTTGCATACCAAA+TGG | - | chr8.2:80574002-80574021 | None:intergenic | 30.0% | |
AGACTAATTTCAGTAAAGGA+AGG | + | chr8.2:80574236-80574255 | MS.gene42798:CDS | 30.0% | |
AGATGAAAACAACCATGAAA+AGG | - | chr8.2:80573922-80573941 | None:intergenic | 30.0% | |
ATATAATAGCTTCTGCACTT+TGG | + | chr8.2:80576890-80576909 | MS.gene42798:CDS | 30.0% | |
ATTGATCCTAATGATCCATA+TGG | + | chr8.2:80576960-80576979 | MS.gene42798:CDS | 30.0% | |
CTAAAAATCAACACACAAGT+TGG | - | chr8.2:80575780-80575799 | None:intergenic | 30.0% | |
TACGAATTAAAGTTCCAAAC+AGG | - | chr8.2:80575590-80575609 | None:intergenic | 30.0% | |
TATAATAGCTTCTGCACTTT+GGG | + | chr8.2:80576891-80576910 | MS.gene42798:CDS | 30.0% | |
TATCAGATTATGTGCTTCAA+AGG | + | chr8.2:80577087-80577106 | MS.gene42798:CDS | 30.0% | |
TTGAATGTAATAACATGTGC+CGG | - | chr8.2:80574496-80574515 | None:intergenic | 30.0% | |
! | AACAGTTTTCTCGGAAATTT+TGG | - | chr8.2:80576190-80576209 | None:intergenic | 30.0% |
! | ACAGTTTTCTCGGAAATTTT+GGG | - | chr8.2:80576189-80576208 | None:intergenic | 30.0% |
! | ACCAAGTGCTTTAAATTTGA+TGG | + | chr8.2:80575818-80575837 | MS.gene42798:intron | 30.0% |
! | ACTATGAAAGTGTAAAACTG+TGG | + | chr8.2:80574344-80574363 | MS.gene42798:intron | 30.0% |
! | AGAGCAACTCTTAATTTTGA+CGG | + | chr8.2:80574666-80574685 | MS.gene42798:intron | 30.0% |
! | AGAGCAACTCTTAATTTTGA+TGG | + | chr8.2:80574666-80574685 | MS.gene42798:intron | 30.0% |
! | GATTACCATCATTTTGTAGA+AGG | - | chr8.2:80574270-80574289 | None:intergenic | 30.0% |
! | TCAATCAGTGAGTAATGTTT+TGG | - | chr8.2:80576945-80576964 | None:intergenic | 30.0% |
! | TCCATCAAATTTAAAGCACT+TGG | - | chr8.2:80575822-80575841 | None:intergenic | 30.0% |
! | TCTTCTAGTAACTTTTCGTT+AGG | + | chr8.2:80573939-80573958 | MS.gene42798:CDS | 30.0% |
!! | TGCTCTAAGATAAAATTGTG+TGG | - | chr8.2:80576733-80576752 | None:intergenic | 30.0% |
!!! | AGATTTTGATTGACACTGAT+TGG | + | chr8.2:80577060-80577079 | MS.gene42798:CDS | 30.0% |
!!! | CAACTAGTCTGTTATTTTCT+CGG | + | chr8.2:80574787-80574806 | MS.gene42798:intron | 30.0% |
AAAAGAATCACCAATGGCTA+TGG | - | chr8.2:80576058-80576077 | None:intergenic | 35.0% | |
AAACAACCATGAAAAGGAGT+TGG | - | chr8.2:80573916-80573935 | None:intergenic | 35.0% | |
AAAGCTTTCTTCAAGGCTTA+AGG | + | chr8.2:80576467-80576486 | MS.gene42798:CDS | 35.0% | |
AACATTGAGATGATTCGATG+TGG | - | chr8.2:80575137-80575156 | None:intergenic | 35.0% | |
AAGAAGTTACCACTCTCAAA+TGG | + | chr8.2:80577200-80577219 | MS.gene42798:CDS | 35.0% | |
AAGAGTTCAACTAAGAGTGA+AGG | + | chr8.2:80576795-80576814 | MS.gene42798:CDS | 35.0% | |
AAGGAAGAAAGCTTTCTTCA+AGG | + | chr8.2:80576460-80576479 | MS.gene42798:CDS | 35.0% | |
AAGGAGACAGATTTCAGTAA+AGG | + | chr8.2:80576486-80576505 | MS.gene42798:CDS | 35.0% | |
AATCAGTAAGTAGAGGAGAA+AGG | - | chr8.2:80575998-80576017 | None:intergenic | 35.0% | |
AGAAGTTACCACTCTCAAAT+GGG | + | chr8.2:80577201-80577220 | MS.gene42798:CDS | 35.0% | |
AGACAGATTTCAGTAAAGGA+AGG | + | chr8.2:80576490-80576509 | MS.gene42798:CDS | 35.0% | |
AGTTGTTCCAAATTCATGGA+CGG | + | chr8.2:80574820-80574839 | MS.gene42798:intron | 35.0% | |
ATCAGGTTACTTGTATGTCT+TGG | + | chr8.2:80574400-80574419 | MS.gene42798:intron | 35.0% | |
ATCAGTAAGTAGAGGAGAAA+GGG | - | chr8.2:80575997-80576016 | None:intergenic | 35.0% | |
ATGGTAAATTCAACAGTCTG+TGG | + | chr8.2:80576385-80576404 | MS.gene42798:CDS | 35.0% | |
ATGGTGAACTTAACAGTCTT+TGG | + | chr8.2:80574152-80574171 | MS.gene42798:CDS | 35.0% | |
ATTGAAGAATCAGTGAGTAG+AGG | - | chr8.2:80573830-80573849 | None:intergenic | 35.0% | |
ATTGCAGAATCAGTAAGTAG+AGG | - | chr8.2:80576005-80576024 | None:intergenic | 35.0% | |
CTCAATGTTAAAGTTTCTCG+CGG | + | chr8.2:80576327-80576346 | MS.gene42798:CDS | 35.0% | |
GAGATCCTTCTACAAAATGA+TGG | + | chr8.2:80574262-80574281 | MS.gene42798:intron | 35.0% | |
TAGATATGGTTACCTGGATT+TGG | + | chr8.2:80575464-80575483 | MS.gene42798:intron | 35.0% | |
TATTATCTGTGTCAACGTGT+TGG | + | chr8.2:80574535-80574554 | MS.gene42798:intron | 35.0% | |
TCACATTACTAGAGTAACAG+TGG | - | chr8.2:80575369-80575388 | None:intergenic | 35.0% | |
TCACTCTTAGTTGAACTCTT+AGG | - | chr8.2:80576795-80576814 | None:intergenic | 35.0% | |
TCAGGTTACTTGTATGTCTT+GGG | + | chr8.2:80574401-80574420 | MS.gene42798:intron | 35.0% | |
TGAAGCACATAATCTGATAG+AGG | - | chr8.2:80577086-80577105 | None:intergenic | 35.0% | |
TGCAAGTTGTTCCAAATTCA+TGG | + | chr8.2:80574816-80574835 | MS.gene42798:intron | 35.0% | |
TGCAGTAAAAGAATCACCAA+TGG | - | chr8.2:80573889-80573908 | None:intergenic | 35.0% | |
TGGTAAATTCAACAGTCTGT+GGG | + | chr8.2:80576386-80576405 | MS.gene42798:CDS | 35.0% | |
TGGTGAACTTAACAGTCTTT+GGG | + | chr8.2:80574153-80574172 | MS.gene42798:CDS | 35.0% | |
TGTACTTATACTGTTAGTGC+AGG | + | chr8.2:80576852-80576871 | MS.gene42798:CDS | 35.0% | |
TTTGAGTGGAAGAAAACCAA+AGG | - | chr8.2:80576133-80576152 | None:intergenic | 35.0% | |
! | ATACCACACAACAGTTTTCT+CGG | - | chr8.2:80576199-80576218 | None:intergenic | 35.0% |
! | GAACTCGTTTTACAAAGTGA+TGG | + | chr8.2:80576516-80576535 | MS.gene42798:CDS | 35.0% |
! | TGGCGATTCTAGTGATTTTA+AGG | - | chr8.2:80575117-80575136 | None:intergenic | 35.0% |
!! | AATTGGTCTTTGACAAGTCA+GGG | + | chr8.2:80576640-80576659 | MS.gene42798:CDS | 35.0% |
!! | AGAGTTGATGCAACTCTTAA+TGG | + | chr8.2:80577224-80577243 | MS.gene42798:CDS | 35.0% |
!! | AGCAACTCTTAATTTTGACG+GGG | + | chr8.2:80574668-80574687 | MS.gene42798:intron | 35.0% |
!! | AGTTCCACTTTTGATCCTTT+TGG | - | chr8.2:80576243-80576262 | None:intergenic | 35.0% |
!! | CAATTAGTCTTTGACAGATC+AGG | + | chr8.2:80574383-80574402 | MS.gene42798:intron | 35.0% |
!! | CTTCTTAAGTGGACTTTTCA+GGG | - | chr8.2:80575662-80575681 | None:intergenic | 35.0% |
!! | GAGCAACTCTTAATTTTGAC+GGG | + | chr8.2:80574667-80574686 | MS.gene42798:intron | 35.0% |
!! | GCTCAGTGCTTTAATTTTGA+TGG | + | chr8.2:80575891-80575910 | MS.gene42798:intron | 35.0% |
!! | TAGTTTTACAGGGTTGAAGT+TGG | - | chr8.2:80575398-80575417 | None:intergenic | 35.0% |
!! | TCAGGGTACTTGTATGTTTT+GGG | + | chr8.2:80576657-80576676 | MS.gene42798:CDS | 35.0% |
!! | TCTTCTTAAGTGGACTTTTC+AGG | - | chr8.2:80575663-80575682 | None:intergenic | 35.0% |
!! | TGAGCACTAGTCTTTCAATT+TGG | - | chr8.2:80575876-80575895 | None:intergenic | 35.0% |
!! | TGTTTTGGACACTGACATTT+TGG | - | chr8.2:80576930-80576949 | None:intergenic | 35.0% |
AAATCCAGTACATCAAGTGC+TGG | + | chr8.2:80576612-80576631 | MS.gene42798:CDS | 40.0% | |
AAGAGTTCAACTGAGAGTGA+AGG | + | chr8.2:80574714-80574733 | MS.gene42798:intron | 40.0% | |
AATCAGTGAGTAGAGGAGAA+GGG | - | chr8.2:80573823-80573842 | None:intergenic | 40.0% | |
ACATGACATGACAGAAGAAG+AGG | + | chr8.2:80574920-80574939 | MS.gene42798:intron | 40.0% | |
ACTGTTGTGTGGTATGCTAA+TGG | + | chr8.2:80576204-80576223 | MS.gene42798:CDS | 40.0% | |
AGAAACTCACTGCCAATGAT+GGG | + | chr8.2:80574023-80574042 | MS.gene42798:intron | 40.0% | |
AGTAAATAGGTGGAAACCGA+AGG | + | chr8.2:80574847-80574866 | MS.gene42798:intron | 40.0% | |
ATGCCTTAGATCATAGGTGT+CGG | - | chr8.2:80574437-80574456 | None:intergenic | 40.0% | |
CAAAGAAGGTTGGCATCATT+GGG | + | chr8.2:80574988-80575007 | MS.gene42798:CDS | 40.0% | |
CACAACTTGAGAAGGCAATA+AGG | - | chr8.2:80576436-80576455 | None:intergenic | 40.0% | |
CAGACAAAATTAGTGAACGG+TGG | + | chr8.2:80575170-80575189 | MS.gene42798:intron | 40.0% | |
CAGCTTCCATATGGATCATT+AGG | - | chr8.2:80576969-80576988 | None:intergenic | 40.0% | |
CATGGACGGCAAAAGTAAAT+AGG | + | chr8.2:80574834-80574853 | MS.gene42798:intron | 40.0% | |
CCTTTATCCACAACTTGAGA+AGG | - | chr8.2:80576444-80576463 | None:intergenic | 40.0% | |
CTACACTGCTCTTCAGTAAA+AGG | - | chr8.2:80577113-80577132 | None:intergenic | 40.0% | |
GAAACCGAAGGAAATTCAGA+CGG | + | chr8.2:80574859-80574878 | MS.gene42798:intron | 40.0% | |
GACTAATTGAGTTCCAGAAC+TGG | - | chr8.2:80574372-80574391 | None:intergenic | 40.0% | |
GCAGTGTAGGAAATCTTGTA+TGG | + | chr8.2:80577124-80577143 | MS.gene42798:CDS | 40.0% | |
GCTATGAATGTAGTGCTTCA+TGG | - | chr8.2:80575256-80575275 | None:intergenic | 40.0% | |
GGACTTGTGTTCTTCTTAAG+TGG | - | chr8.2:80575673-80575692 | None:intergenic | 40.0% | |
GGATGATTGTTTGTGTTCTG+TGG | + | chr8.2:80577145-80577164 | MS.gene42798:CDS | 40.0% | |
GTCAGGTTATGGAATACTGA+AGG | + | chr8.2:80576303-80576322 | MS.gene42798:CDS | 40.0% | |
GTTCAACTAAGAGTGAAGGT+TGG | + | chr8.2:80576799-80576818 | MS.gene42798:CDS | 40.0% | |
TAAAACTGTGGATCCAGTTC+TGG | + | chr8.2:80574356-80574375 | MS.gene42798:intron | 40.0% | |
TACTCCGTCTGAATTTCCTT+CGG | - | chr8.2:80574866-80574885 | None:intergenic | 40.0% | |
TATACTGTTAGTGCAGGTAG+TGG | + | chr8.2:80576858-80576877 | MS.gene42798:CDS | 40.0% | |
TCACTCTCAGTTGAACTCTT+TGG | - | chr8.2:80574714-80574733 | None:intergenic | 40.0% | |
TCAGGTTAGGTGATAGTTGT+TGG | + | chr8.2:80577174-80577193 | MS.gene42798:CDS | 40.0% | |
TCCATAACCTGACACCATTT+GGG | - | chr8.2:80576296-80576315 | None:intergenic | 40.0% | |
TGCACCAAAAGGATCAAAAG+TGG | + | chr8.2:80576236-80576255 | MS.gene42798:CDS | 40.0% | |
TGTGGTGTGTTCAATGACAT+TGG | + | chr8.2:80574112-80574131 | MS.gene42798:CDS | 40.0% | |
TTCCATAACCTGACACCATT+TGG | - | chr8.2:80576297-80576316 | None:intergenic | 40.0% | |
TTCCATAGCATGTCACCATT+TGG | - | chr8.2:80574064-80574083 | None:intergenic | 40.0% | |
TTTCCGAGAAAACTGTTGTG+TGG | + | chr8.2:80576193-80576212 | MS.gene42798:CDS | 40.0% | |
! | ACCAATCGCTATAGTGCTTT+TGG | - | chr8.2:80573874-80573893 | None:intergenic | 40.0% |
! | ACCAATGGCTATGGTACTTT+TGG | - | chr8.2:80576049-80576068 | None:intergenic | 40.0% |
! | ACTTTTGCCGTCCATGAATT+TGG | - | chr8.2:80574830-80574849 | None:intergenic | 40.0% |
! | CACAAACCAACTCCTTTTCA+TGG | + | chr8.2:80573907-80573926 | MS.gene42798:CDS | 40.0% |
! | CACACAAGTTGGCTTAACTT+TGG | - | chr8.2:80575769-80575788 | None:intergenic | 40.0% |
! | CCTTCTCAAGTTGTGGATAA+AGG | + | chr8.2:80576441-80576460 | MS.gene42798:CDS | 40.0% |
! | CTTATTGCCTTCTCAAGTTG+TGG | + | chr8.2:80576434-80576453 | MS.gene42798:CDS | 40.0% |
! | CTTGGTGATAGAGTTTCTTG+TGG | + | chr8.2:80574094-80574113 | MS.gene42798:CDS | 40.0% |
! | CTTTTACTGAAGAGCAGTGT+AGG | + | chr8.2:80577111-80577130 | MS.gene42798:CDS | 40.0% |
! | TGCAACTCTTAATGGTGCTA+AGG | + | chr8.2:80577232-80577251 | MS.gene42798:CDS | 40.0% |
!! | ACCAAAAGCACTATAGCGAT+TGG | + | chr8.2:80573870-80573889 | MS.gene42798:CDS | 40.0% |
!! | ACCAAAAGTACCATAGCCAT+TGG | + | chr8.2:80576045-80576064 | MS.gene42798:CDS | 40.0% |
!! | ACTTTTGATCCTTTTGGTGC+AGG | - | chr8.2:80576237-80576256 | None:intergenic | 40.0% |
!! | CAATTGGTCTTTGACAAGTC+AGG | + | chr8.2:80576639-80576658 | MS.gene42798:CDS | 40.0% |
!! | GTCAGGGTACTTGTATGTTT+TGG | + | chr8.2:80576656-80576675 | MS.gene42798:CDS | 40.0% |
!! | TGTGTTCTGTGGCTATTTTC+AGG | + | chr8.2:80577156-80577175 | MS.gene42798:CDS | 40.0% |
!!! | TCTGTGGCTATTTTCAGGTT+AGG | + | chr8.2:80577161-80577180 | MS.gene42798:CDS | 40.0% |
AAAGGGCTTAGACCATACTG+TGG | - | chr8.2:80576826-80576845 | None:intergenic | 45.0% | |
AACAACCTGAGAAGGCAAGA+AGG | - | chr8.2:80574203-80574222 | None:intergenic | 45.0% | |
ACATGACAGAAGAAGAGGTG+AGG | + | chr8.2:80574925-80574944 | MS.gene42798:intron | 45.0% | |
AGCCTTTCAACAACCTGAGA+AGG | - | chr8.2:80574211-80574230 | None:intergenic | 45.0% | |
AGTTAGCACCAACCCATCAT+TGG | - | chr8.2:80576271-80576290 | None:intergenic | 45.0% | |
ATCAGTGAGTAGAGGAGAAG+GGG | - | chr8.2:80573822-80573841 | None:intergenic | 45.0% | |
ATCATTGGGACGAAAATGGG+CGG | + | chr8.2:80575002-80575021 | MS.gene42798:CDS | 45.0% | |
CATTGGAAACTCTGTGCTTG+AGG | + | chr8.2:80574129-80574148 | MS.gene42798:CDS | 45.0% | |
CCATAACCTGACACCATTTG+GGG | - | chr8.2:80576295-80576314 | None:intergenic | 45.0% | |
CGAAAACTCTAAGTTTGCGC+GGG | - | chr8.2:80575205-80575224 | None:intergenic | 45.0% | |
CTCCAAATGGTGACATGCTA+TGG | + | chr8.2:80574059-80574078 | MS.gene42798:CDS | 45.0% | |
GAATCAGTGAGTAGAGGAGA+AGG | - | chr8.2:80573824-80573843 | None:intergenic | 45.0% | |
GAGAAACTCACTGCCAATGA+TGG | + | chr8.2:80574022-80574041 | MS.gene42798:intron | 45.0% | |
GATCATCTTCTGCACATCCT+TGG | - | chr8.2:80577007-80577026 | None:intergenic | 45.0% | |
GCAAAGAAGGTTGGCATCAT+TGG | + | chr8.2:80574987-80575006 | MS.gene42798:CDS | 45.0% | |
GCACATCCTTGGATGAAATC+TGG | - | chr8.2:80576996-80577015 | None:intergenic | 45.0% | |
GCGAAAACTCTAAGTTTGCG+CGG | - | chr8.2:80575206-80575225 | None:intergenic | 45.0% | |
GGACGGCAAAAGTAAATAGG+TGG | + | chr8.2:80574837-80574856 | MS.gene42798:intron | 45.0% | |
GGCATCATTGGGACGAAAAT+GGG | + | chr8.2:80574999-80575018 | MS.gene42798:CDS | 45.0% | |
GGTTTGAGCTACAACACTGA+TGG | - | chr8.2:80573853-80573872 | None:intergenic | 45.0% | |
GTTCAACTGAGAGTGAAGGT+TGG | + | chr8.2:80574718-80574737 | MS.gene42798:intron | 45.0% | |
TAACTTCCCCAAATGGTGTC+AGG | + | chr8.2:80576286-80576305 | MS.gene42798:CDS | 45.0% | |
TCAACTCTCCCATTTGAGAG+TGG | - | chr8.2:80577212-80577231 | None:intergenic | 45.0% | |
TCGCACCCATCACAGAAAAT+AGG | + | chr8.2:80575222-80575241 | MS.gene42798:intron | 45.0% | |
TGCAAGCCAGATTTCATCCA+AGG | + | chr8.2:80576987-80577006 | MS.gene42798:CDS | 45.0% | |
TGGAACTCACTGCCAATGAT+GGG | + | chr8.2:80576256-80576275 | MS.gene42798:CDS | 45.0% | |
TGGCATCATTGGGACGAAAA+TGG | + | chr8.2:80574998-80575017 | MS.gene42798:CDS | 45.0% | |
! | ACCTATGATCTAAGGCATGC+CGG | + | chr8.2:80574439-80574458 | MS.gene42798:intron | 45.0% |
! | GAAGAGGTGAGGATGGTTTT+AGG | + | chr8.2:80574936-80574955 | MS.gene42798:intron | 45.0% |
! | TGCCTTCTCAGGTTGTTGAA+AGG | + | chr8.2:80574206-80574225 | MS.gene42798:CDS | 45.0% |
! | TGTCTATGTCGGTGCTTCAT+AGG | + | chr8.2:80574569-80574588 | MS.gene42798:intron | 45.0% |
!! | ATCAAGTGCTGGAGCTCAAT+TGG | + | chr8.2:80576623-80576642 | MS.gene42798:CDS | 45.0% |
!! | ATGAAGCACCGACATAGACA+CGG | - | chr8.2:80574569-80574588 | None:intergenic | 45.0% |
!! | GAAGGCAATAAGGTGTCACT+AGG | - | chr8.2:80576426-80576445 | None:intergenic | 45.0% |
!! | TTGGTGCTAACTTCCCCAAA+TGG | + | chr8.2:80576279-80576298 | MS.gene42798:CDS | 45.0% |
!!! | GGATGGTTTTAGGTATGCAG+TGG | + | chr8.2:80574946-80574965 | MS.gene42798:intron | 45.0% |
AAGCAACCATGGAGATGTGC+TGG | - | chr8.2:80576091-80576110 | None:intergenic | 50.0% | |
ACATGCTATGGAACCCTGAG+GGG | + | chr8.2:80574071-80574090 | MS.gene42798:CDS | 50.0% | |
ACCGGCATGCCTTAGATCAT+AGG | - | chr8.2:80574443-80574462 | None:intergenic | 50.0% | |
ACTCTAAGTTTGCGCGGGAA+TGG | - | chr8.2:80575200-80575219 | None:intergenic | 50.0% | |
AGCTCCAGCACTTGATGTAC+TGG | - | chr8.2:80576619-80576638 | None:intergenic | 50.0% | |
CACTGGCAACTTTGTGCTTC+AGG | + | chr8.2:80576362-80576381 | MS.gene42798:CDS | 50.0% | |
CCAAAGGCAAAGTCACCAGA+AGG | - | chr8.2:80576117-80576136 | None:intergenic | 50.0% | |
CCAGAAGGTGAAAGCAACCA+TGG | - | chr8.2:80576102-80576121 | None:intergenic | 50.0% | |
CCTTCTGGTGACTTTGCCTT+TGG | + | chr8.2:80576114-80576133 | MS.gene42798:CDS | 50.0% | |
CGCGGTGTATTGAATGACAC+TGG | + | chr8.2:80576345-80576364 | MS.gene42798:CDS | 50.0% | |
GACAGAAGAAGAGGTGAGGA+TGG | + | chr8.2:80574929-80574948 | MS.gene42798:intron | 50.0% | |
GACATGCTATGGAACCCTGA+GGG | + | chr8.2:80574070-80574089 | MS.gene42798:CDS | 50.0% | |
GGAAACTCTGTGCTTGAGGA+TGG | + | chr8.2:80574133-80574152 | MS.gene42798:CDS | 50.0% | |
GGCAACTTTGTGCTTCAGGA+TGG | + | chr8.2:80576366-80576385 | MS.gene42798:CDS | 50.0% | |
GGTTTGAGCTACAGCACAGA+TGG | - | chr8.2:80576028-80576047 | None:intergenic | 50.0% | |
GTGAAGGTTGGACCACAGTA+TGG | + | chr8.2:80576811-80576830 | MS.gene42798:CDS | 50.0% | |
GTGGAACTCACTGCCAATGA+TGG | + | chr8.2:80576255-80576274 | MS.gene42798:CDS | 50.0% | |
TGACATGCTATGGAACCCTG+AGG | + | chr8.2:80574069-80574088 | MS.gene42798:CDS | 50.0% | |
! | AGTGCAGGTAGTGGTGTTTG+TGG | + | chr8.2:80576867-80576886 | MS.gene42798:CDS | 50.0% |
! | CCATGGTTGCTTTCACCTTC+TGG | + | chr8.2:80576099-80576118 | MS.gene42798:CDS | 50.0% |
! | CCCCAAATGGTGTCAGGTTA+TGG | + | chr8.2:80576292-80576311 | MS.gene42798:CDS | 50.0% |
! | CTGGTGCTAGCTTCTCCAAA+TGG | + | chr8.2:80574046-80574065 | MS.gene42798:intron | 50.0% |
! | GCACCGACACCTATGATCTA+AGG | + | chr8.2:80574431-80574450 | MS.gene42798:intron | 50.0% |
! | GTCGGTGCTTCATAGGTCTT+GGG | + | chr8.2:80574576-80574595 | MS.gene42798:intron | 50.0% |
! | TCTGGCTTGCAGCTTCCATA+TGG | - | chr8.2:80576978-80576997 | None:intergenic | 50.0% |
! | TCTGTGTCAACGTGTTGGTG+CGG | + | chr8.2:80574540-80574559 | MS.gene42798:intron | 50.0% |
! | TGTCGGTGCTTCATAGGTCT+TGG | + | chr8.2:80574575-80574594 | MS.gene42798:intron | 50.0% |
!! | ACTCACTGCCAATGATGGGT+TGG | + | chr8.2:80576260-80576279 | MS.gene42798:CDS | 50.0% |
!!! | GGTTTTAGGTATGCAGTGGC+CGG | + | chr8.2:80574950-80574969 | MS.gene42798:intron | 50.0% |
AAGACGACAGGGTGAGTCTC+TGG | + | chr8.2:80575044-80575063 | MS.gene42798:intron | 55.0% | |
ACTCTATCACCAAGCCCCTC+AGG | - | chr8.2:80574088-80574107 | None:intergenic | 55.0% | |
AGAGACTCACCCTGTCGTCT+TGG | - | chr8.2:80575045-80575064 | None:intergenic | 55.0% | |
AGCTAGCACCAGCCCATCAT+TGG | - | chr8.2:80574038-80574057 | None:intergenic | 55.0% | |
CACAAGCCAGCACATCTCCA+TGG | + | chr8.2:80576082-80576101 | MS.gene42798:CDS | 55.0% | |
CTCTATCACCAAGCCCCTCA+GGG | - | chr8.2:80574087-80574106 | None:intergenic | 55.0% | |
GAAGTGGCTCCAAGACGACA+GGG | + | chr8.2:80575033-80575052 | MS.gene42798:CDS | 55.0% | |
GAGGAGAAGGGGAAGTAGAG+AGG | - | chr8.2:80573811-80573830 | None:intergenic | 55.0% | |
GGAGACAGTCCTGCACCAAA+AGG | + | chr8.2:80576225-80576244 | MS.gene42798:CDS | 55.0% | |
TGAAGTGGCTCCAAGACGAC+AGG | + | chr8.2:80575032-80575051 | MS.gene42798:CDS | 55.0% | |
TGACGCCTTCTTGCCTTCTC+AGG | + | chr8.2:80574195-80574214 | MS.gene42798:CDS | 55.0% | |
TGCGGTGTCCGTGTCTATGT+CGG | + | chr8.2:80574558-80574577 | MS.gene42798:intron | 55.0% | |
!! | AACATGTGCCGGTGTCGTGT+CGG | - | chr8.2:80574485-80574504 | None:intergenic | 55.0% |
!! | ACTCACTGCCAATGATGGGC+TGG | + | chr8.2:80574027-80574046 | MS.gene42798:intron | 55.0% |
ACCTTCTTTGCCACGCCGTC+CGG | - | chr8.2:80574978-80574997 | None:intergenic | 60.0% | |
ATGGGCGGAAGCTGCTGAAG+TGG | + | chr8.2:80575017-80575036 | MS.gene42798:CDS | 60.0% | |
CTATGGAACCCTGAGGGGCT+TGG | + | chr8.2:80574076-80574095 | MS.gene42798:CDS | 60.0% | |
GACGGCGTGGCAAAGAAGGT+TGG | + | chr8.2:80574978-80574997 | MS.gene42798:CDS | 60.0% | |
GACTGACACGTGTCGGACAC+CGG | - | chr8.2:80574461-80574480 | None:intergenic | 60.0% | |
TGTCGGGGACTGACACGTGT+CGG | - | chr8.2:80574468-80574487 | None:intergenic | 60.0% | |
!! | ACATGTGCCGGTGTCGTGTC+GGG | - | chr8.2:80574484-80574503 | None:intergenic | 60.0% |
GTCAGTCCCCGACACGACAC+CGG | + | chr8.2:80574474-80574493 | MS.gene42798:intron | 65.0% | |
!! | CATGTGCCGGTGTCGTGTCG+GGG | - | chr8.2:80574483-80574502 | None:intergenic | 65.0% |
AGGTATGCAGTGGCCGGCGC+CGG | + | chr8.2:80574956-80574975 | MS.gene42798:intron | 70.0% | |
GCCGGACGGCGTGGCAAAGA+AGG | + | chr8.2:80574974-80574993 | MS.gene42798:CDS | 70.0% | |
TTTGCCACGCCGTCCGGCGC+CGG | - | chr8.2:80574972-80574991 | None:intergenic | 75.0% | |
! | ATGCAGTGGCCGGCGCCGGA+CGG | + | chr8.2:80574960-80574979 | MS.gene42798:intron | 75.0% |
!! | GTGGCCGGCGCCGGACGGCG+TGG | + | chr8.2:80574965-80574984 | MS.gene42798:intron | 90.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 80573801 | 80577292 | 80573801 | ID=MS.gene42798 |
chr8.2 | mRNA | 80573801 | 80577292 | 80573801 | ID=MS.gene42798.t1;Parent=MS.gene42798 |
chr8.2 | exon | 80573801 | 80573960 | 80573801 | ID=MS.gene42798.t1.exon1;Parent=MS.gene42798.t1 |
chr8.2 | CDS | 80573801 | 80573960 | 80573801 | ID=cds.MS.gene42798.t1;Parent=MS.gene42798.t1 |
chr8.2 | exon | 80574056 | 80574257 | 80574056 | ID=MS.gene42798.t1.exon2;Parent=MS.gene42798.t1 |
chr8.2 | CDS | 80574056 | 80574257 | 80574056 | ID=cds.MS.gene42798.t1;Parent=MS.gene42798.t1 |
chr8.2 | exon | 80574966 | 80575054 | 80574966 | ID=MS.gene42798.t1.exon3;Parent=MS.gene42798.t1 |
chr8.2 | CDS | 80574966 | 80575054 | 80574966 | ID=cds.MS.gene42798.t1;Parent=MS.gene42798.t1 |
chr8.2 | exon | 80576040 | 80577292 | 80576040 | ID=MS.gene42798.t1.exon4;Parent=MS.gene42798.t1 |
chr8.2 | CDS | 80576040 | 80577292 | 80576040 | ID=cds.MS.gene42798.t1;Parent=MS.gene42798.t1 |
Gene Sequence |
Protein sequence |