AlfalfaGEDB | MS.gene46956

M. sativa cultivar XinJiangDaYe / MS.gene46956

KEGG: -
GO: -
PFAM: PF00248.24

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene46956.t1	XP_013459612.1	91.3	69	6	0	28	96	298	366	2.60E-26	127.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene46956.t1	Q94A68	71.6	67	19	0	30	96	311	377	4.3e-22	105.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene46956.t1	A0A072UX32	91.3	69	6	0	28	96	298	366	1.9e-26	127.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049137	MS.gene46956	0.818774	1.64E-52	-1.69E-46
MS.gene049149	MS.gene46956	0.805336	1.40E-49	-1.69E-46
MS.gene049150	MS.gene46956	0.81647	5.44E-52	-1.69E-46
MS.gene049153	MS.gene46956	0.815781	7.75E-52	-1.69E-46
MS.gene049170	MS.gene46956	0.84124	5.36E-58	-1.69E-46
MS.gene049346	MS.gene46956	0.823516	1.33E-53	-1.69E-46
MS.gene049351	MS.gene46956	0.800546	1.37E-48	-1.69E-46
MS.gene049356	MS.gene46956	0.872825	2.36E-67	-1.69E-46
MS.gene049369	MS.gene46956	0.847469	1.13E-59	-1.69E-46
MS.gene049396	MS.gene46956	0.82031	7.34E-53	-1.69E-46
MS.gene049488	MS.gene46956	0.826138	3.20E-54	-1.69E-46
MS.gene049609	MS.gene46956	0.826125	3.22E-54	-1.69E-46
MS.gene049661	MS.gene46956	0.827013	1.98E-54	-1.69E-46
MS.gene049662	MS.gene46956	0.831933	1.26E-55	-1.69E-46
MS.gene049758	MS.gene46956	0.818963	1.49E-52	-1.69E-46
MS.gene049805	MS.gene46956	0.818136	2.29E-52	-1.69E-46
MS.gene049910	MS.gene46956	0.834792	2.44E-56	-1.69E-46
MS.gene049993	MS.gene46956	0.804743	1.87E-49	-1.69E-46
MS.gene050060	MS.gene46956	0.828689	7.82E-55	-1.69E-46
MS.gene050301	MS.gene46956	0.858563	7.56E-63	-1.69E-46
MS.gene050397	MS.gene46956	0.855168	7.56E-62	-1.69E-46
MS.gene050399	MS.gene46956	0.801564	8.49E-49	-1.69E-46
MS.gene050400	MS.gene46956	0.853836	1.84E-61	-1.69E-46
MS.gene050406	MS.gene46956	0.835115	2.02E-56	-1.69E-46
MS.gene050426	MS.gene46956	-0.865347	6.31E-65	-1.69E-46
MS.gene050464	MS.gene46956	0.868488	6.29E-66	-1.69E-46
MS.gene050529	MS.gene46956	0.864161	1.48E-64	-1.69E-46
MS.gene050593	MS.gene46956	0.84556	3.76E-59	-1.69E-46
MS.gene050625	MS.gene46956	0.832745	7.93E-56	-1.69E-46
MS.gene050670	MS.gene46956	0.926877	2.56E-91	-1.69E-46
MS.gene050772	MS.gene46956	0.806041	9.97E-50	-1.69E-46
MS.gene050812	MS.gene46956	0.820706	5.95E-53	-1.69E-46
MS.gene050971	MS.gene46956	0.860596	1.85E-63	-1.69E-46
MS.gene05105	MS.gene46956	0.922491	9.18E-89	-1.69E-46
MS.gene051360	MS.gene46956	0.845861	3.12E-59	-1.69E-46
MS.gene051387	MS.gene46956	0.840801	6.98E-58	-1.69E-46
MS.gene051521	MS.gene46956	0.804705	1.90E-49	-1.69E-46
MS.gene051525	MS.gene46956	0.901741	1.97E-78	-1.69E-46
MS.gene051582	MS.gene46956	0.847402	1.18E-59	-1.69E-46
MS.gene051588	MS.gene46956	0.819443	1.16E-52	-1.69E-46
MS.gene051605	MS.gene46956	0.834015	3.83E-56	-1.69E-46
MS.gene051666	MS.gene46956	0.820618	6.24E-53	-1.69E-46
MS.gene051692	MS.gene46956	0.809782	1.60E-50	-1.69E-46
MS.gene051860	MS.gene46956	0.854196	1.45E-61	-1.69E-46
MS.gene051983	MS.gene46956	0.809984	1.44E-50	-1.69E-46
MS.gene052011	MS.gene46956	-0.874896	4.72E-68	-1.69E-46
MS.gene052077	MS.gene46956	0.881159	3.03E-70	-1.69E-46
MS.gene052078	MS.gene46956	0.810223	1.28E-50	-1.69E-46
MS.gene052128	MS.gene46956	-0.840126	1.05E-57	-1.69E-46
MS.gene052134	MS.gene46956	0.855714	5.24E-62	-1.69E-46
MS.gene052135	MS.gene46956	0.864326	1.32E-64	-1.69E-46
MS.gene052136	MS.gene46956	0.852066	5.89E-61	-1.69E-46
MS.gene052178	MS.gene46956	0.804745	1.86E-49	-1.69E-46
MS.gene052188	MS.gene46956	0.910594	1.57E-82	-1.69E-46
MS.gene052253	MS.gene46956	0.911949	3.40E-83	-1.69E-46
MS.gene052255	MS.gene46956	0.807213	5.64E-50	-1.69E-46
MS.gene052310	MS.gene46956	0.88586	5.65E-72	-1.69E-46
MS.gene052322	MS.gene46956	0.829959	3.84E-55	-1.69E-46
MS.gene052340	MS.gene46956	0.896442	3.68E-76	-1.69E-46
MS.gene052346	MS.gene46956	0.851076	1.12E-60	-1.69E-46
MS.gene052414	MS.gene46956	0.889448	2.40E-73	-1.69E-46
MS.gene052421	MS.gene46956	0.866643	2.45E-65	-1.69E-46
MS.gene052469	MS.gene46956	0.807122	5.90E-50	-1.69E-46
MS.gene052481	MS.gene46956	0.875017	4.29E-68	-1.69E-46
MS.gene052484	MS.gene46956	0.826603	2.48E-54	-1.69E-46
MS.gene052485	MS.gene46956	0.876396	1.44E-68	-1.69E-46
MS.gene052501	MS.gene46956	0.832174	1.10E-55	-1.69E-46
MS.gene052505	MS.gene46956	0.844794	6.06E-59	-1.69E-46
MS.gene052758	MS.gene46956	0.805322	1.41E-49	-1.69E-46
MS.gene052762	MS.gene46956	0.817791	2.75E-52	-1.69E-46
MS.gene052784	MS.gene46956	0.815665	8.23E-52	-1.69E-46
MS.gene052982	MS.gene46956	0.857961	1.14E-62	-1.69E-46
MS.gene052999	MS.gene46956	0.823296	1.50E-53	-1.69E-46
MS.gene053103	MS.gene46956	0.828655	7.97E-55	-1.69E-46
MS.gene053169	MS.gene46956	0.851526	8.38E-61	-1.69E-46
MS.gene05316	MS.gene46956	0.834993	2.17E-56	-1.69E-46
MS.gene053209	MS.gene46956	0.859796	3.23E-63	-1.69E-46
MS.gene05335	MS.gene46956	0.823785	1.15E-53	-1.69E-46
MS.gene053449	MS.gene46956	0.870031	1.98E-66	-1.69E-46
MS.gene053557	MS.gene46956	0.85003	2.21E-60	-1.69E-46
MS.gene053574	MS.gene46956	0.80265	5.07E-49	-1.69E-46
MS.gene053758	MS.gene46956	0.867006	1.88E-65	-1.69E-46
MS.gene053813	MS.gene46956	0.803549	3.31E-49	-1.69E-46
MS.gene053836	MS.gene46956	0.845766	3.31E-59	-1.69E-46
MS.gene053912	MS.gene46956	0.853155	2.88E-61	-1.69E-46
MS.gene053928	MS.gene46956	0.831674	1.46E-55	-1.69E-46
MS.gene054010	MS.gene46956	0.824962	6.07E-54	-1.69E-46
MS.gene054011	MS.gene46956	0.828009	1.14E-54	-1.69E-46
MS.gene054012	MS.gene46956	0.820466	6.76E-53	-1.69E-46
MS.gene054013	MS.gene46956	0.814509	1.49E-51	-1.69E-46
MS.gene054102	MS.gene46956	0.810028	1.41E-50	-1.69E-46
MS.gene054123	MS.gene46956	0.827893	1.22E-54	-1.69E-46
MS.gene054183	MS.gene46956	0.86846	6.42E-66	-1.69E-46
MS.gene054349	MS.gene46956	0.882094	1.39E-70	-1.69E-46
MS.gene054556	MS.gene46956	0.873762	1.14E-67	-1.69E-46
MS.gene054719	MS.gene46956	0.849812	2.54E-60	-1.69E-46
MS.gene054742	MS.gene46956	-0.804902	1.73E-49	-1.69E-46
MS.gene054917	MS.gene46956	0.823732	1.18E-53	-1.69E-46
MS.gene054918	MS.gene46956	0.833483	5.20E-56	-1.69E-46
MS.gene054955	MS.gene46956	0.820586	6.34E-53	-1.69E-46
MS.gene05505	MS.gene46956	0.84868	5.25E-60	-1.69E-46
MS.gene055116	MS.gene46956	0.934645	2.93E-96	-1.69E-46
MS.gene055277	MS.gene46956	0.823804	1.14E-53	-1.69E-46
MS.gene055289	MS.gene46956	0.819479	1.14E-52	-1.69E-46
MS.gene055369	MS.gene46956	0.856849	2.44E-62	-1.69E-46
MS.gene055422	MS.gene46956	0.820299	7.38E-53	-1.69E-46
MS.gene055428	MS.gene46956	0.801057	1.08E-48	-1.69E-46
MS.gene055539	MS.gene46956	0.849679	2.77E-60	-1.69E-46
MS.gene05553	MS.gene46956	0.876977	9.09E-69	-1.69E-46
MS.gene055564	MS.gene46956	0.803981	2.69E-49	-1.69E-46
MS.gene05556	MS.gene46956	0.813649	2.30E-51	-1.69E-46
MS.gene055601	MS.gene46956	-0.805884	1.08E-49	-1.69E-46
MS.gene055604	MS.gene46956	0.821061	4.93E-53	-1.69E-46
MS.gene055666	MS.gene46956	0.826077	3.31E-54	-1.69E-46
MS.gene055722	MS.gene46956	0.802033	6.80E-49	-1.69E-46
MS.gene055741	MS.gene46956	0.861125	1.28E-63	-1.69E-46
MS.gene055744	MS.gene46956	0.871154	8.48E-67	-1.69E-46
MS.gene055859	MS.gene46956	0.813411	2.59E-51	-1.69E-46
MS.gene055909	MS.gene46956	0.84883	4.77E-60	-1.69E-46
MS.gene055911	MS.gene46956	0.855209	7.36E-62	-1.69E-46
MS.gene05594	MS.gene46956	0.812156	4.89E-51	-1.69E-46
MS.gene056191	MS.gene46956	0.860892	1.50E-63	-1.69E-46
MS.gene056233	MS.gene46956	0.821784	3.36E-53	-1.69E-46
MS.gene056407	MS.gene46956	0.873288	1.65E-67	-1.69E-46
MS.gene056410	MS.gene46956	0.815381	9.52E-52	-1.69E-46
MS.gene056422	MS.gene46956	0.833198	6.12E-56	-1.69E-46
MS.gene056511	MS.gene46956	0.908034	2.66E-81	-1.69E-46
MS.gene056514	MS.gene46956	0.843554	1.30E-58	-1.69E-46
MS.gene056609	MS.gene46956	0.802522	5.39E-49	-1.69E-46
MS.gene056612	MS.gene46956	0.804126	2.51E-49	-1.69E-46
MS.gene05664	MS.gene46956	0.817111	3.91E-52	-1.69E-46
MS.gene056659	MS.gene46956	0.860134	2.55E-63	-1.69E-46
MS.gene05666	MS.gene46956	0.802684	4.99E-49	-1.69E-46
MS.gene056723	MS.gene46956	0.832077	1.16E-55	-1.69E-46
MS.gene056796	MS.gene46956	0.810705	1.01E-50	-1.69E-46
MS.gene056899	MS.gene46956	-0.849526	3.06E-60	-1.69E-46
MS.gene056979	MS.gene46956	0.807294	5.42E-50	-1.69E-46
MS.gene05702	MS.gene46956	0.864942	8.46E-65	-1.69E-46
MS.gene057076	MS.gene46956	0.814896	1.22E-51	-1.69E-46
MS.gene057124	MS.gene46956	0.873275	1.67E-67	-1.69E-46
MS.gene057146	MS.gene46956	0.820284	7.44E-53	-1.69E-46
MS.gene057310	MS.gene46956	0.823566	1.29E-53	-1.69E-46
MS.gene057330	MS.gene46956	0.829395	5.27E-55	-1.69E-46
MS.gene057396	MS.gene46956	0.881258	2.79E-70	-1.69E-46
MS.gene057416	MS.gene46956	0.800641	1.31E-48	-1.69E-46
MS.gene057448	MS.gene46956	0.849661	2.80E-60	-1.69E-46
MS.gene057449	MS.gene46956	0.842664	2.25E-58	-1.69E-46
MS.gene057450	MS.gene46956	0.845446	4.04E-59	-1.69E-46
MS.gene057476	MS.gene46956	0.840457	8.60E-58	-1.69E-46
MS.gene057734	MS.gene46956	0.840418	8.80E-58	-1.69E-46
MS.gene057749	MS.gene46956	0.88352	4.19E-71	-1.69E-46
MS.gene057796	MS.gene46956	0.805921	1.06E-49	-1.69E-46
MS.gene057823	MS.gene46956	0.883191	5.53E-71	-1.69E-46
MS.gene057825	MS.gene46956	0.854551	1.14E-61	-1.69E-46
MS.gene057888	MS.gene46956	0.819084	1.40E-52	-1.69E-46
MS.gene058002	MS.gene46956	0.848684	5.24E-60	-1.69E-46
MS.gene058007	MS.gene46956	0.881738	1.87E-70	-1.69E-46
MS.gene058019	MS.gene46956	0.809147	2.18E-50	-1.69E-46
MS.gene058082	MS.gene46956	0.811002	8.70E-51	-1.69E-46
MS.gene05811	MS.gene46956	0.846694	1.85E-59	-1.69E-46
MS.gene058120	MS.gene46956	0.826308	2.91E-54	-1.69E-46
MS.gene058142	MS.gene46956	0.835588	1.54E-56	-1.69E-46
MS.gene058233	MS.gene46956	0.820275	7.47E-53	-1.69E-46
MS.gene058276	MS.gene46956	0.817511	3.17E-52	-1.69E-46
MS.gene058293	MS.gene46956	0.818086	2.35E-52	-1.69E-46
MS.gene058365	MS.gene46956	0.806627	7.51E-50	-1.69E-46
MS.gene058376	MS.gene46956	0.870878	1.05E-66	-1.69E-46
MS.gene05842	MS.gene46956	0.812333	4.47E-51	-1.69E-46
MS.gene058444	MS.gene46956	0.866259	3.25E-65	-1.69E-46
MS.gene058660	MS.gene46956	0.839333	1.69E-57	-1.69E-46
MS.gene058700	MS.gene46956	0.895799	6.80E-76	-1.69E-46
MS.gene058710	MS.gene46956	0.84269	2.22E-58	-1.69E-46
MS.gene05886	MS.gene46956	0.851103	1.10E-60	-1.69E-46
MS.gene058928	MS.gene46956	0.891611	3.39E-74	-1.69E-46
MS.gene058948	MS.gene46956	0.840192	1.01E-57	-1.69E-46
MS.gene058949	MS.gene46956	0.81623	6.15E-52	-1.69E-46
MS.gene058995	MS.gene46956	0.844285	8.31E-59	-1.69E-46
MS.gene059011	MS.gene46956	0.867641	1.18E-65	-1.69E-46
MS.gene05907	MS.gene46956	0.886389	3.57E-72	-1.69E-46
MS.gene059080	MS.gene46956	0.82051	6.60E-53	-1.69E-46
MS.gene059082	MS.gene46956	0.861434	1.03E-63	-1.69E-46
MS.gene059141	MS.gene46956	0.861904	7.39E-64	-1.69E-46
MS.gene059285	MS.gene46956	0.871137	8.59E-67	-1.69E-46
MS.gene059294	MS.gene46956	0.869895	2.20E-66	-1.69E-46
MS.gene059366	MS.gene46956	0.874847	4.90E-68	-1.69E-46
MS.gene059402	MS.gene46956	-0.803061	4.17E-49	-1.69E-46
MS.gene059420	MS.gene46956	0.908939	9.87E-82	-1.69E-46
MS.gene059455	MS.gene46956	0.825635	4.21E-54	-1.69E-46
MS.gene059462	MS.gene46956	0.856582	2.92E-62	-1.69E-46
MS.gene059536	MS.gene46956	0.819482	1.13E-52	-1.69E-46
MS.gene059597	MS.gene46956	0.845889	3.06E-59	-1.69E-46
MS.gene05959	MS.gene46956	0.807411	5.12E-50	-1.69E-46
MS.gene059674	MS.gene46956	0.83752	4.95E-57	-1.69E-46
MS.gene059676	MS.gene46956	0.85519	7.45E-62	-1.69E-46
MS.gene059688	MS.gene46956	0.914428	1.94E-84	-1.69E-46
MS.gene059692	MS.gene46956	0.897213	1.75E-76	-1.69E-46
MS.gene059695	MS.gene46956	0.900546	6.57E-78	-1.69E-46
MS.gene059711	MS.gene46956	0.823286	1.50E-53	-1.69E-46
MS.gene059807	MS.gene46956	0.905619	3.54E-80	-1.69E-46
MS.gene05984	MS.gene46956	0.858707	6.85E-63	-1.69E-46
MS.gene059876	MS.gene46956	0.853501	2.29E-61	-1.69E-46
MS.gene059894	MS.gene46956	0.817773	2.77E-52	-1.69E-46
MS.gene059933	MS.gene46956	0.854857	9.31E-62	-1.69E-46
MS.gene060247	MS.gene46956	0.826185	3.12E-54	-1.69E-46
MS.gene060372	MS.gene46956	0.835715	1.43E-56	-1.69E-46
MS.gene06037	MS.gene46956	0.820611	6.26E-53	-1.69E-46
MS.gene060401	MS.gene46956	0.800985	1.11E-48	-1.69E-46
MS.gene060403	MS.gene46956	0.905492	4.05E-80	-1.69E-46
MS.gene060407	MS.gene46956	0.810223	1.28E-50	-1.69E-46
MS.gene060495	MS.gene46956	0.810299	1.24E-50	-1.69E-46
MS.gene060804	MS.gene46956	0.826119	3.23E-54	-1.69E-46
MS.gene060818	MS.gene46956	0.801256	9.81E-49	-1.69E-46
MS.gene060835	MS.gene46956	0.832747	7.92E-56	-1.69E-46
MS.gene060837	MS.gene46956	0.874938	4.57E-68	-1.69E-46
MS.gene060986	MS.gene46956	0.856213	3.75E-62	-1.69E-46
MS.gene061041	MS.gene46956	0.826	3.45E-54	-1.69E-46
MS.gene061049	MS.gene46956	0.883461	4.40E-71	-1.69E-46
MS.gene061051	MS.gene46956	-0.845658	3.54E-59	-1.69E-46
MS.gene061154	MS.gene46956	0.922695	7.03E-89	-1.69E-46
MS.gene061159	MS.gene46956	0.868093	8.43E-66	-1.69E-46
MS.gene061214	MS.gene46956	0.800426	1.45E-48	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene46956.t1	MTR_3g449790	91.304	69	6	0	28	96	292	360	1.24e-37	129
MS.gene46956.t1	MTR_3g449790	91.304	69	6	0	28	96	298	366	1.35e-37	129
MS.gene46956.t1	MTR_3g092140	37.349	83	47	2	2	84	274	351	9.12e-11	57.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene46956.t1	AT1G06690	69.565	69	21	0	28	96	309	377	1.15e-28	106

Find 19 sgRNAs with CRISPR-Local

Find 46 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCGAAAATTAAGCCTGTTAT+TGG	0.217835	3.2:-37628825	MS.gene46956:CDS
TCAACTGGAAAGCCAATAAC+AGG	0.332654	3.2:+37628813	None:intergenic
GAACAAGCTGAAGAATTTAA+AGG	0.335134	3.2:-37628903	MS.gene46956:CDS
GGTAGCTGAGCTACGAAGTT+TGG	0.341379	3.2:-37628850	MS.gene46956:CDS
TTTGTTAGGTATCACTAAAC+TGG	0.342680	3.2:-37628974	MS.gene46956:intron
TTATATCGCCATGTGGTCAT+TGG	0.400355	3.2:-37629419	MS.gene46956:CDS
GGAAATGTTGTACCAATTCC+TGG	0.415471	3.2:-37628939	MS.gene46956:CDS
GAAGAATTTAAAGGTGCATT+GGG	0.420507	3.2:-37628894	MS.gene46956:CDS
TGAAGAATTTAAAGGTGCAT+TGG	0.443008	3.2:-37628895	MS.gene46956:CDS
AATTTAAAGGTGCATTGGGA+TGG	0.525566	3.2:-37628890	MS.gene46956:CDS
TTAGGTATCACTAAACTGGC+TGG	0.543245	3.2:-37628970	MS.gene46956:intron
CTAAACTGGCTGGTAGCTCA+AGG	0.571830	3.2:-37628960	MS.gene46956:CDS
ATGGAGATTGACTAATGAAG+AGG	0.577740	3.2:-37628871	MS.gene46956:CDS
AATTCGCTCAATTTGAACGT+GGG	0.581250	3.2:+37629353	None:intergenic
CAATTAAGCCAATGACCACA+TGG	0.625087	3.2:+37629411	None:intergenic
ATTCGCTCAATTTGAACGTG+GGG	0.640247	3.2:+37629354	None:intergenic
TAATTCGCTCAATTTGAACG+TGG	0.645872	3.2:+37629352	None:intergenic
ACAATAGTGATATTAGTGAG+AGG	0.660892	3.2:+37629381	None:intergenic
CATGGTGTTATATCGCCATG+TGG	0.736577	3.2:-37629426	MS.gene46956:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AAAGAATCAGTTTGTTTTTA+AGG	+	chr3.2:37629237-37629256	None:intergenic	20.0%
!!!	AAATATTTTTGGTATTCTCA+TGG	-	chr3.2:37628959-37628978	MS.gene46956:CDS	20.0%
!!!	AAGAATCAGTTTGTTTTTAA+GGG	+	chr3.2:37629236-37629255	None:intergenic	20.0%
!!!	AATATTTTTGGTATTCTCAT+GGG	-	chr3.2:37628960-37628979	MS.gene46956:CDS	20.0%
!!!	GTTGTCTAAGTAAATATTTT+TGG	-	chr3.2:37628948-37628967	MS.gene46956:CDS	20.0%
!	ACACAAGTATTATTATCTGA+AGG	+	chr3.2:37629208-37629227	None:intergenic	25.0%
!	GAGACTTAAATGTAATAAGA+GGG	+	chr3.2:37628919-37628938	None:intergenic	25.0%
!	GTGTTACAATTGTGTAATTT+CGG	+	chr3.2:37629144-37629163	None:intergenic	25.0%
!	TGAGACTTAAATGTAATAAG+AGG	+	chr3.2:37628920-37628939	None:intergenic	25.0%
!!	AAACAAACTGATTCTTTGTT+AGG	-	chr3.2:37629240-37629259	MS.gene46956:intron	25.0%
!!!	ATATTTTTGGTATTCTCATG+GGG	-	chr3.2:37628961-37628980	MS.gene46956:CDS	25.0%
	AATAAGAGGGTTACTTACTT+TGG	+	chr3.2:37628906-37628925	None:intergenic	30.0%
	ACAATAGTGATATTAGTGAG+AGG	+	chr3.2:37628850-37628869	None:intergenic	30.0%
	GAACAAGCTGAAGAATTTAA+AGG	-	chr3.2:37629325-37629344	MS.gene46956:intron	30.0%
	TCGAAAATTAAGCCTGTTAT+TGG	-	chr3.2:37629403-37629422	MS.gene46956:CDS	30.0%
	TTTGTTAGGTATCACTAAAC+TGG	-	chr3.2:37629254-37629273	MS.gene46956:intron	30.0%
!	AATTGCACTTTTAGTCTATC+AGG	+	chr3.2:37629166-37629185	None:intergenic	30.0%
!	GAAGAATTTAAAGGTGCATT+GGG	-	chr3.2:37629334-37629353	MS.gene46956:intron	30.0%
!	TGAAGAATTTAAAGGTGCAT+TGG	-	chr3.2:37629333-37629352	MS.gene46956:intron	30.0%
!!!	TATTTTTGGTATTCTCATGG+GGG	-	chr3.2:37628962-37628981	MS.gene46956:CDS	30.0%
	AATTCGCTCAATTTGAACGT+GGG	+	chr3.2:37628878-37628897	None:intergenic	35.0%
	ATGGAGATTGACTAATGAAG+AGG	-	chr3.2:37629357-37629376	MS.gene46956:CDS	35.0%
	TAATTCGCTCAATTTGAACG+TGG	+	chr3.2:37628879-37628898	None:intergenic	35.0%
	TGTAACAAGATGCATGCTTA+GGG	-	chr3.2:37629088-37629107	MS.gene46956:intron	35.0%
	TTGTAACAAGATGCATGCTT+AGG	-	chr3.2:37629087-37629106	MS.gene46956:intron	35.0%
!	AATTTAAAGGTGCATTGGGA+TGG	-	chr3.2:37629338-37629357	MS.gene46956:intron	35.0%
!	TAATTCCTGCATTTGAAACC+TGG	-	chr3.2:37629114-37629133	MS.gene46956:intron	35.0%
	ACAATCAAGTCCGTTGTCAT+TGG	+	chr3.2:37629071-37629090	None:intergenic	40.0%
	ATTCGCTCAATTTGAACGTG+GGG	+	chr3.2:37628877-37628896	None:intergenic	40.0%
	CAATTAAGCCAATGACCACA+TGG	+	chr3.2:37628820-37628839	None:intergenic	40.0%
	GGAAATGTTGTACCAATTCC+TGG	-	chr3.2:37629289-37629308	MS.gene46956:intron	40.0%
	TCAACTGGAAAGCCAATAAC+AGG	+	chr3.2:37629418-37629437	None:intergenic	40.0%
	TGCAGCACATGCACTAATAA+TGG	+	chr3.2:37629008-37629027	None:intergenic	40.0%
	TTAGGTATCACTAAACTGGC+TGG	-	chr3.2:37629258-37629277	MS.gene46956:intron	40.0%
	TTATATCGCCATGTGGTCAT+TGG	-	chr3.2:37628809-37628828	MS.gene46956:CDS	40.0%
	TTGTGTAATTTCGGTTCTCC+AGG	+	chr3.2:37629135-37629154	None:intergenic	40.0%
	GTATTCTCATGGGGGCAAAA+AGG	-	chr3.2:37628970-37628989	MS.gene46956:intron	45.0%
	GTCGACAATGCCAATGACAA+CGG	-	chr3.2:37629058-37629077	MS.gene46956:intron	45.0%
	GTTCTCCAGGTTTCAAATGC+AGG	+	chr3.2:37629122-37629141	None:intergenic	45.0%
	GTTGTCATTGGCATTGTCGA+CGG	+	chr3.2:37629059-37629078	None:intergenic	45.0%
!!!	GCTGTTTTAGCACCAGGAAT+TGG	+	chr3.2:37629304-37629323	None:intergenic	45.0%
!!!	TGTTCTGCTGTTTTAGCACC+AGG	+	chr3.2:37629310-37629329	None:intergenic	45.0%
	CTAAACTGGCTGGTAGCTCA+AGG	-	chr3.2:37629268-37629287	MS.gene46956:intron	50.0%
	GCATTGTCGACGGTTCACAA+GGG	+	chr3.2:37629049-37629068	None:intergenic	50.0%
	GGTAGCTGAGCTACGAAGTT+TGG	-	chr3.2:37629378-37629397	MS.gene46956:CDS	50.0%
	GGCATTGTCGACGGTTCACA+AGG	+	chr3.2:37629050-37629069	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.2	gene	37628803	37629447	37628803	ID=MS.gene46956
chr3.2	mRNA	37628803	37629447	37628803	ID=MS.gene46956.t1;Parent=MS.gene46956
chr3.2	exon	37629343	37629447	37629343	ID=MS.gene46956.t1.exon1;Parent=MS.gene46956.t1
chr3.2	CDS	37629343	37629447	37629343	ID=cds.MS.gene46956.t1;Parent=MS.gene46956.t1
chr3.2	exon	37628803	37628988	37628803	ID=MS.gene46956.t1.exon2;Parent=MS.gene46956.t1
chr3.2	CDS	37628803	37628988	37628803	ID=cds.MS.gene46956.t1;Parent=MS.gene46956.t1

Gene Sequence

>MS.gene46956

ATGGTGTTATATCGCCATGTGGTCATTGGCTTAATTGCACTTTTCCTCTCACTAATATCACTATTGTGCGTCCCCACGTTCAAATTGAGCGAATTAAGTTCCAAAGTAAGTAACCCTCTTATTACATTTAAGTCTCACTTATTGTGTTGTCTAAGTAAATATTTTTGGTATTCTCATGGGGGCAAAAAGGAGACAACATCAGCCATTATTAGTGCATGTGCTGCACTGCACGTGAAAATTCGTCCCTTGTGAACCGTCGACAATGCCAATGACAACGGACTTGATTGTAACAAGATGCATGCTTAGGGATTTAATTCCTGCATTTGAAACCTGGAGAACCGAAATTACACAATTGTAACACCTGATAGACTAAAAGTGCAATTAAGCTTTTAATTAGAATAGCCTTCAGATAATAATACTTGTGTGTTATCCCTTAAAAACAAACTGATTCTTTGTTAGGTATCACTAAACTGGCTGGTAGCTCAAGGAAATGTTGTACCAATTCCTGGTGCTAAAACAGCAGAACAAGCTGAAGAATTTAAAGGTGCATTGGGATGGAGATTGACTAATGAAGAGGTAGCTGAGCTACGAAGTTTGGCGTCGAAAATTAAGCCTGTTATTGGCTTTCCAGTTGAAAAACTCTGA

Protein sequence

>MS.gene46956.t1

MVLYRHVVIGLIALFLSLISLLCVPTFKLSELSSKVSLNWLVAQGNVVPIPGAKTAEQAEEFKGALGWRLTNEEVAELRSLASKIKPVIGFPVEKL