AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene052758

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052758.t1 MTR_4g015080 91.214 387 30 1 18 404 25 407 0.0 733
MS.gene052758.t1 MTR_4g015080 98.438 64 1 0 405 468 514 577 4.95e-33 132
MS.gene052758.t1 MTR_7g067010 83.516 364 60 0 41 404 34 397 0.0 640
MS.gene052758.t1 MTR_7g067010 85.000 60 9 0 405 464 504 563 6.81e-26 111
MS.gene052758.t1 MTR_3g462710 69.755 367 109 2 41 405 34 400 1.36e-179 514
MS.gene052758.t1 MTR_3g462710 52.174 92 33 2 374 463 482 564 2.38e-20 94.4
MS.gene052758.t1 MTR_3g462710 70.103 291 85 2 117 405 1 291 4.98e-138 405
MS.gene052758.t1 MTR_3g462710 52.174 92 33 2 374 463 373 455 1.54e-20 94.4
MS.gene052758.t1 MTR_3g112470 49.041 365 180 4 44 405 36 397 1.05e-116 354
MS.gene052758.t1 MTR_3g112460 47.945 365 184 4 44 405 36 397 2.51e-114 348
MS.gene052758.t1 MTR_7g098200 44.865 370 192 3 41 404 39 402 1.84e-107 331
MS.gene052758.t1 MTR_3g112450 48.774 367 179 6 44 405 36 398 2.34e-106 327
MS.gene052758.t1 MTR_5g055000 44.909 383 203 6 27 404 14 393 2.64e-106 328
MS.gene052758.t1 MTR_5g055000 54.098 61 27 1 405 464 502 562 6.37e-13 71.2
MS.gene052758.t1 MTR_7g098230 42.365 406 211 5 8 404 8 399 7.22e-106 327
MS.gene052758.t1 MTR_7g098180 42.424 396 208 5 31 415 34 420 1.81e-104 323
MS.gene052758.t1 MTR_1g041815 47.091 361 180 4 45 400 41 395 2.06e-103 320
MS.gene052758.t1 MTR_7g098220 45.822 371 189 2 41 405 40 404 6.51e-103 319
MS.gene052758.t1 MTR_1g041835 45.628 366 188 4 45 405 41 400 8.00e-103 318
MS.gene052758.t1 MTR_7g098200 44.595 370 183 5 41 404 39 392 8.79e-103 319
MS.gene052758.t1 MTR_7g098040 44.262 366 192 3 45 404 48 407 3.10e-102 318
MS.gene052758.t1 MTR_7g098220 46.027 365 185 2 47 405 2 360 4.60e-102 316
MS.gene052758.t1 MTR_7g098150 42.049 371 203 3 41 405 43 407 6.77e-102 313
MS.gene052758.t1 MTR_1g075440 46.832 363 179 5 45 400 42 397 9.23e-102 316
MS.gene052758.t1 MTR_7g098160 42.432 370 201 3 41 404 43 406 9.72e-102 317
MS.gene052758.t1 MTR_7g098160 44.828 58 32 0 405 462 514 571 4.94e-11 65.5
MS.gene052758.t1 MTR_3g072300 42.347 392 213 6 18 405 15 397 6.08e-101 314
MS.gene052758.t1 MTR_3g072300 49.153 59 30 0 405 463 504 562 3.73e-11 65.9
MS.gene052758.t1 MTR_7g088825 41.623 382 218 4 28 404 19 400 4.68e-100 312
MS.gene052758.t1 MTR_5g012290 46.133 375 194 6 40 407 36 409 1.46e-98 308
MS.gene052758.t1 MTR_7g098090 41.867 375 201 4 41 404 43 411 9.60e-98 306
MS.gene052758.t1 MTR_4g101380 46.011 376 192 7 40 405 36 410 8.57e-97 303
MS.gene052758.t1 MTR_5g012270 43.085 376 204 5 40 407 38 411 3.14e-96 301
MS.gene052758.t1 MTR_1g041875 44.231 364 193 4 47 405 45 403 1.34e-95 300
MS.gene052758.t1 MTR_7g088790 41.979 374 210 4 37 404 35 407 2.30e-93 295
MS.gene052758.t1 MTR_7g088820 39.840 374 220 4 37 405 31 404 8.76e-93 293
MS.gene052758.t1 MTR_7g006540 42.480 379 200 8 41 406 73 446 2.28e-92 293
MS.gene052758.t1 MTR_1g116930 39.646 396 231 5 10 402 5 395 5.89e-91 288
MS.gene052758.t1 MTR_1g041885 42.936 361 196 4 50 405 1 356 1.37e-90 285
MS.gene052758.t1 MTR_7g010820 44.110 365 194 6 44 401 39 400 4.60e-90 286
MS.gene052758.t1 MTR_1g042310 42.618 359 196 4 47 400 5 358 5.01e-90 285
MS.gene052758.t1 MTR_4g019580 41.873 363 206 4 45 405 50 409 1.51e-89 285
MS.gene052758.t1 MTR_1g042310 42.618 359 196 4 47 400 42 395 2.26e-89 284
MS.gene052758.t1 MTR_5g014150 41.892 370 207 5 40 402 53 421 3.64e-89 284
MS.gene052758.t1 MTR_7g005930 40.431 371 214 6 37 403 41 408 2.62e-88 281
MS.gene052758.t1 MTR_3g069500 41.713 362 206 4 45 405 49 406 9.98e-88 280
MS.gene052758.t1 MTR_3g069500 46.032 63 33 1 405 467 504 565 6.31e-11 65.1
MS.gene052758.t1 MTR_1g042310 42.135 356 196 4 50 400 1 351 2.12e-87 278
MS.gene052758.t1 MTR_4g033375 40.489 368 195 6 41 405 42 388 7.43e-87 275
MS.gene052758.t1 MTR_7g088820 40.828 338 195 4 73 405 5 342 6.11e-86 273
MS.gene052758.t1 MTR_4g098800 40.256 390 221 4 19 401 28 412 1.15e-85 274
MS.gene052758.t1 MTR_4g098800 40.256 390 221 4 19 401 93 477 4.09e-85 275
MS.gene052758.t1 MTR_5g038060 38.119 404 236 6 14 405 14 415 4.57e-85 273
MS.gene052758.t1 MTR_7g065080 38.560 389 231 5 19 405 22 404 6.65e-85 272
MS.gene052758.t1 MTR_3g005010 42.308 364 178 6 45 405 44 378 7.15e-85 271
MS.gene052758.t1 MTR_7g013270 39.896 386 220 8 24 403 86 465 4.64e-84 271
MS.gene052758.t1 MTR_4g033395 40.054 367 196 6 41 404 42 387 3.92e-83 265
MS.gene052758.t1 MTR_8g038880 40.732 410 206 7 7 405 3 386 3.92e-82 265
MS.gene052758.t1 MTR_3g069420 40.331 362 211 5 45 405 48 405 5.96e-82 265
MS.gene052758.t1 MTR_3g014790 42.120 368 189 4 45 405 31 381 4.44e-81 261
MS.gene052758.t1 MTR_3g014790 50.000 62 29 2 402 463 489 548 1.45e-11 67.0
MS.gene052758.t1 MTR_4g033325 41.417 367 188 6 41 404 41 383 2.15e-80 259
MS.gene052758.t1 MTR_4g107580 37.076 383 230 5 30 404 26 405 5.48e-80 259
MS.gene052758.t1 MTR_4g033315 39.891 366 197 5 41 404 41 385 9.76e-80 258
MS.gene052758.t1 MTR_4g033310 39.891 366 197 5 41 404 41 385 9.76e-80 258
MS.gene052758.t1 MTR_4g107510 36.815 383 230 6 30 404 38 416 1.78e-79 258
MS.gene052758.t1 MTR_4g114340 44.054 370 193 6 40 402 33 395 7.35e-78 253
MS.gene052758.t1 MTR_3g069440 39.779 362 213 4 45 405 47 404 7.46e-78 254
MS.gene052758.t1 MTR_0294s0020 40.327 367 194 6 41 405 41 384 7.71e-78 253
MS.gene052758.t1 MTR_4g033330 40.164 366 196 5 41 404 41 385 1.26e-77 252
MS.gene052758.t1 MTR_7g111260 37.360 356 210 6 54 405 39 385 4.55e-77 252
MS.gene052758.t1 MTR_7g098200 43.197 294 155 3 117 404 1 288 7.86e-77 248
MS.gene052758.t1 MTR_8g469480 36.340 388 230 6 30 405 40 422 1.31e-76 251
MS.gene052758.t1 MTR_4g107530 36.528 386 227 8 30 404 35 413 7.01e-76 249
MS.gene052758.t1 MTR_3g100980 37.366 372 217 5 41 404 26 389 1.01e-75 248
MS.gene052758.t1 MTR_7g065080 40.439 319 185 4 89 405 2 317 2.49e-75 244
MS.gene052758.t1 MTR_2g017750 36.935 398 230 9 23 405 29 420 2.78e-75 247
MS.gene052758.t1 MTR_4g107610 36.165 412 243 7 20 423 23 422 2.79e-75 248
MS.gene052758.t1 MTR_4g107670 37.795 381 205 8 45 405 38 406 2.42e-74 244
MS.gene052758.t1 MTR_8g087780 36.968 376 227 5 40 405 30 405 5.67e-73 241
MS.gene052758.t1 MTR_1g085090 37.255 357 209 8 54 405 39 385 6.86e-73 241
MS.gene052758.t1 MTR_1g009200 37.105 380 216 8 35 402 31 399 1.08e-71 238
MS.gene052758.t1 MTR_2g005130 36.957 368 214 5 41 404 50 403 3.18e-71 236
MS.gene052758.t1 MTR_8g469470 34.913 401 244 7 15 402 20 416 4.00e-71 236
MS.gene052758.t1 MTR_5g038190 34.396 439 257 9 17 444 14 432 8.65e-71 235
MS.gene052758.t1 MTR_7g088820 40.136 294 171 4 117 405 1 294 1.82e-70 232
MS.gene052758.t1 MTR_3g100980 34.750 400 217 6 41 404 26 417 5.57e-70 233
MS.gene052758.t1 MTR_1g026740 36.559 372 222 8 37 401 23 387 7.71e-70 232
MS.gene052758.t1 MTR_7g064780 34.625 413 256 7 1 404 1 408 9.30e-70 233
MS.gene052758.t1 MTR_8g087810 38.032 376 222 5 40 404 30 405 2.06e-69 231
MS.gene052758.t1 MTR_5g085850 40.909 374 204 5 40 405 39 403 3.37e-69 231
MS.gene052758.t1 MTR_8g469310 38.147 367 218 6 45 404 40 404 3.83e-68 228
MS.gene052758.t1 MTR_7g064800 35.437 412 237 12 8 401 7 407 2.97e-66 223
MS.gene052758.t1 MTR_5g038380 36.486 370 225 6 45 404 42 411 4.70e-65 220
MS.gene052758.t1 MTR_1g026750 36.132 393 233 10 37 420 24 407 3.34e-64 217
MS.gene052758.t1 MTR_4g033325 40.411 292 147 6 116 404 18 285 2.29e-62 209
MS.gene052758.t1 MTR_4g123537 39.009 323 185 7 86 405 96 409 7.69e-62 212
MS.gene052758.t1 MTR_2g101640 34.190 389 240 10 25 403 16 398 2.68e-61 211
MS.gene052758.t1 MTR_2g101590 35.550 391 232 11 25 403 19 401 1.05e-59 207
MS.gene052758.t1 MTR_2g101610 35.751 386 229 10 29 403 25 402 1.15e-59 207
MS.gene052758.t1 MTR_1g026770 34.048 373 233 8 37 403 21 386 1.53e-59 205
MS.gene052758.t1 MTR_4g033325 40.449 267 139 4 141 404 10 259 4.25e-59 200
MS.gene052758.t1 MTR_1g057460 34.646 381 229 9 29 403 42 408 1.17e-58 202
MS.gene052758.t1 MTR_4g033385 37.987 308 163 7 100 404 4 286 1.36e-58 200
MS.gene052758.t1 MTR_8g103233 34.853 373 225 10 37 400 23 386 3.95e-58 201
MS.gene052758.t1 MTR_7g098210 35.635 362 156 9 50 404 1 292 6.79e-58 197
MS.gene052758.t1 MTR_2g101650 32.990 388 239 9 28 403 21 399 3.19e-57 199
MS.gene052758.t1 MTR_4g011280 31.095 402 260 7 28 420 29 422 5.50e-55 193
MS.gene052758.t1 MTR_1g057460 35.043 351 208 9 59 403 1 337 3.73e-54 189
MS.gene052758.t1 MTR_0236s0050 34.571 350 211 8 59 403 1 337 2.80e-50 179
MS.gene052758.t1 MTR_2g101560 31.688 385 246 7 29 403 25 402 8.72e-49 177
MS.gene052758.t1 MTR_6g008690 34.715 386 205 9 36 404 15 370 1.17e-48 175
MS.gene052758.t1 MTR_2g093160 30.833 360 236 6 50 401 40 394 2.92e-44 163
MS.gene052758.t1 MTR_7g051880 32.099 324 193 7 59 382 53 349 3.51e-42 157
MS.gene052758.t1 MTR_7g051830 32.099 324 193 7 59 382 53 349 6.17e-41 154
MS.gene052758.t1 MTR_2g093180 31.492 362 233 6 50 401 40 396 1.05e-39 150
MS.gene052758.t1 MTR_7g052600 30.000 340 211 7 59 398 53 365 1.79e-39 149
MS.gene052758.t1 MTR_2g093640 29.155 367 234 7 50 401 40 395 1.45e-38 147
MS.gene052758.t1 MTR_4g024930 31.266 387 229 11 24 401 32 390 2.41e-37 144
MS.gene052758.t1 MTR_4g033310 48.077 156 74 2 41 196 41 189 1.53e-34 135
MS.gene052758.t1 MTR_4g033310 33.333 126 78 1 279 404 202 321 1.70e-18 88.2
MS.gene052758.t1 MTR_1g009170 33.071 254 117 7 154 401 9 215 3.73e-30 121
MS.gene052758.t1 MTR_7g064160 35.802 81 49 1 23 103 24 101 1.66e-11 61.6
MS.gene052758.t1 MTR_8g091265 37.143 105 62 3 301 401 5 109 2.50e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052758.t1 AT3G54140 73.008 389 99 3 18 404 15 399 0.0 590
MS.gene052758.t1 AT3G54140 66.102 59 20 0 405 463 506 564 2.26e-19 91.3
MS.gene052758.t1 AT3G54140 73.008 389 99 3 18 404 15 399 0.0 590
MS.gene052758.t1 AT3G54140 66.102 59 20 0 405 463 506 564 2.26e-19 91.3
MS.gene052758.t1 AT5G01180 68.367 392 119 3 15 405 13 400 0.0 556
MS.gene052758.t1 AT5G01180 65.574 61 21 0 405 465 506 566 3.42e-17 84.7
MS.gene052758.t1 AT5G01180 68.367 392 119 3 15 405 13 400 0.0 556
MS.gene052758.t1 AT5G01180 65.574 61 21 0 405 465 506 566 3.42e-17 84.7
MS.gene052758.t1 AT5G01180 68.367 392 119 3 15 405 13 400 0.0 556
MS.gene052758.t1 AT5G01180 65.574 61 21 0 405 465 506 566 3.42e-17 84.7
MS.gene052758.t1 AT2G02040 60.789 380 145 4 29 405 39 417 3.27e-157 458
MS.gene052758.t1 AT2G02040 57.377 61 26 0 405 465 524 584 1.56e-15 79.3
MS.gene052758.t1 AT1G62200 56.658 383 159 4 29 405 50 431 1.43e-146 431
MS.gene052758.t1 AT1G62200 49.153 59 30 0 405 463 530 588 5.01e-12 68.6
MS.gene052758.t1 AT1G62200 52.913 412 158 6 29 405 50 460 3.14e-140 416
MS.gene052758.t1 AT1G62200 49.153 59 30 0 405 463 559 617 5.01e-12 68.6
MS.gene052758.t1 AT1G62200 52.913 412 158 6 29 405 64 474 5.67e-140 416
MS.gene052758.t1 AT1G62200 49.153 59 30 0 405 463 573 631 5.45e-12 68.6
MS.gene052758.t1 AT2G02020 50.636 393 151 6 15 405 30 381 1.46e-124 374
MS.gene052758.t1 AT1G68570 47.606 376 192 4 35 405 27 402 2.05e-104 323
MS.gene052758.t1 AT1G68570 41.489 94 50 2 372 464 481 570 1.99e-12 69.7
MS.gene052758.t1 AT2G02020 45.547 393 150 7 15 405 30 360 7.56e-104 320
MS.gene052758.t1 AT1G68570 47.709 371 189 4 40 405 2 372 3.25e-103 319
MS.gene052758.t1 AT1G68570 41.489 94 50 2 372 464 451 540 2.44e-12 69.3
MS.gene052758.t1 AT2G40460 42.559 383 206 5 25 405 21 391 3.28e-99 309
MS.gene052758.t1 AT5G46040 43.443 366 196 5 45 405 41 400 3.36e-98 307
MS.gene052758.t1 AT5G46050 43.443 366 196 5 45 405 41 400 8.94e-96 300
MS.gene052758.t1 AT2G37900 45.730 363 191 5 45 405 52 410 7.90e-95 298
MS.gene052758.t1 AT1G12110 45.946 370 190 6 45 405 41 409 9.13e-95 298
MS.gene052758.t1 AT5G19640 42.708 384 208 7 32 411 63 438 2.48e-94 297
MS.gene052758.t1 AT5G13400 40.554 397 220 6 18 404 54 444 7.08e-92 291
MS.gene052758.t1 AT2G37900 46.108 334 174 5 74 405 2 331 2.55e-88 278
MS.gene052758.t1 AT4G21680 41.425 379 208 6 36 404 33 407 6.18e-88 280
MS.gene052758.t1 AT4G21680 50.847 59 29 0 405 463 516 574 8.40e-12 67.8
MS.gene052758.t1 AT3G53960 42.338 385 212 8 25 405 34 412 1.12e-87 280
MS.gene052758.t1 AT2G26690 44.533 375 193 7 36 402 29 396 6.84e-85 272
MS.gene052758.t1 AT2G26690 54.545 55 25 0 402 456 498 552 2.83e-12 69.3
MS.gene052758.t1 AT2G26690 44.837 368 188 7 43 402 3 363 1.57e-84 270
MS.gene052758.t1 AT2G26690 54.545 55 25 0 402 456 465 519 2.48e-12 69.3
MS.gene052758.t1 AT3G54450 40.054 367 200 5 45 405 26 378 2.83e-84 270
MS.gene052758.t1 AT1G69870 38.462 377 221 5 38 405 58 432 7.52e-83 268
MS.gene052758.t1 AT1G59740 39.837 369 215 4 41 404 51 417 9.39e-83 267
MS.gene052758.t1 AT2G26690 44.818 357 182 7 54 402 2 351 3.62e-81 261
MS.gene052758.t1 AT2G26690 54.545 55 25 0 402 456 453 507 2.57e-12 69.3
MS.gene052758.t1 AT1G32450 41.081 370 207 7 44 403 50 418 2.00e-80 261
MS.gene052758.t1 AT1G72125 41.081 370 196 7 41 405 39 391 1.37e-77 253
MS.gene052758.t1 AT1G52190 37.949 390 221 8 29 403 19 402 2.61e-77 253
MS.gene052758.t1 AT1G69850 40.104 384 199 7 45 405 39 414 4.71e-77 252
MS.gene052758.t1 AT3G21670 41.534 378 197 7 40 404 38 404 4.99e-76 249
MS.gene052758.t1 AT1G27080 35.714 378 223 7 38 402 21 391 3.61e-74 244
MS.gene052758.t1 AT1G18880 35.236 403 234 12 30 422 21 406 2.01e-73 242
MS.gene052758.t1 AT1G72130 37.958 382 194 9 32 405 29 375 3.24e-73 240
MS.gene052758.t1 AT1G22540 40.489 368 196 6 41 405 40 387 6.42e-73 240
MS.gene052758.t1 AT1G22540 41.667 60 35 0 405 464 495 554 5.37e-11 65.1
MS.gene052758.t1 AT1G72140 37.600 375 185 6 45 405 48 387 3.18e-72 238
MS.gene052758.t1 AT3G16180 35.049 408 242 8 28 420 20 419 5.14e-72 239
MS.gene052758.t1 AT1G72120 38.043 368 204 4 41 404 39 386 9.76e-71 234
MS.gene052758.t1 AT1G27040 39.257 377 193 9 45 405 9 365 1.09e-70 234
MS.gene052758.t1 AT5G46050 42.517 294 158 5 117 405 1 288 1.61e-70 231
MS.gene052758.t1 AT1G27040 38.501 387 202 9 35 405 27 393 2.75e-70 233
MS.gene052758.t1 AT1G27040 38.501 387 202 9 35 405 31 397 2.76e-70 233
MS.gene052758.t1 AT1G33440 37.736 371 216 6 41 405 48 409 7.25e-69 231
MS.gene052758.t1 AT1G27080 35.876 354 207 7 62 402 3 349 1.30e-68 228
MS.gene052758.t1 AT1G22570 37.666 377 207 6 40 405 2 361 4.35e-68 226
MS.gene052758.t1 AT1G22570 37.500 376 207 6 41 405 40 398 1.28e-67 226
MS.gene052758.t1 AT5G62680 35.492 386 231 8 30 404 45 423 5.78e-67 226
MS.gene052758.t1 AT5G28470 32.683 410 256 7 21 422 7 404 6.33e-67 224
MS.gene052758.t1 AT5G28470 32.683 410 256 7 21 422 7 404 6.75e-67 224
MS.gene052758.t1 AT5G62730 35.467 375 201 7 45 406 11 357 7.28e-66 221
MS.gene052758.t1 AT5G62730 35.467 375 201 7 45 406 70 416 3.26e-65 221
MS.gene052758.t1 AT3G47960 35.248 383 234 10 30 404 63 439 1.51e-63 217
MS.gene052758.t1 AT1G22550 37.067 375 204 6 41 404 40 393 1.35e-62 213
MS.gene052758.t1 AT5G14940 32.821 390 222 9 33 405 12 378 7.67e-59 202
MS.gene052758.t1 AT3G45660 32.591 359 221 6 50 402 61 404 8.73e-59 203
MS.gene052758.t1 AT3G45660 32.591 359 221 6 50 402 40 383 1.11e-58 202
MS.gene052758.t1 AT3G45660 32.591 359 221 6 50 402 40 383 1.11e-58 202
MS.gene052758.t1 AT3G45650 32.312 359 222 6 50 402 41 384 1.43e-56 197
MS.gene052758.t1 AT1G69860 32.915 398 243 9 32 422 22 402 2.04e-56 196
MS.gene052758.t1 AT3G45650 32.312 359 222 6 50 402 41 384 2.57e-56 197
MS.gene052758.t1 AT3G25260 32.386 352 212 4 45 396 35 360 3.43e-55 192
MS.gene052758.t1 AT3G25280 32.665 349 208 5 48 396 38 359 8.84e-52 183
MS.gene052758.t1 AT3G45720 32.456 342 216 8 53 387 41 374 4.52e-51 182
MS.gene052758.t1 AT3G45690 31.157 337 217 6 50 382 37 362 8.48e-51 180
MS.gene052758.t1 AT3G01350 30.404 421 241 12 33 432 12 401 5.17e-50 179
MS.gene052758.t1 AT3G45680 32.641 337 213 7 53 382 42 371 1.48e-49 178
MS.gene052758.t1 AT1G72130 35.816 282 142 7 132 405 7 257 5.78e-49 173
MS.gene052758.t1 AT1G72130 35.816 282 142 7 132 405 7 257 5.78e-49 173
MS.gene052758.t1 AT3G45700 31.492 362 226 10 50 399 35 386 2.61e-48 174
MS.gene052758.t1 AT3G45710 30.663 362 229 8 53 399 43 397 1.31e-45 167
MS.gene052758.t1 AT5G11570 36.759 253 138 8 33 276 15 254 1.17e-42 157
MS.gene052758.t1 AT5G11570 38.889 90 54 1 314 402 233 322 2.08e-12 69.3
MS.gene052758.t1 AT2G38100 28.754 313 203 5 59 370 2 295 8.87e-31 125
MS.gene052758.t1 AT2G38100 28.754 313 203 5 59 370 24 317 1.35e-30 124
MS.gene052758.t1 AT2G38100 28.754 313 203 5 59 370 18 311 1.40e-30 124

Find 108 sgRNAs with CRISPR-Local

Find 309 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTTGTGTGTTCAAGTTTC+CGG 0.188591 4.4:-85729021 None:intergenic
GTCGGATGGGGATGGGGTTT+TGG 0.221483 4.4:+85728794 MS.gene052758:CDS
AAACCATGTGTTTCATCTTT+TGG 0.233525 4.4:+85728641 MS.gene052758:CDS
ACACTCTAAGTGTCATCTTC+TGG 0.233776 4.4:+85730028 MS.gene052758:CDS
TCAAGTAGAGTGCTATAAAA+AGG 0.238581 4.4:-85728595 None:intergenic
CAAGTATGCATCAGCTAAAA+AGG 0.280188 4.4:-85727764 None:intergenic
GGGAGGGAGCGTAGCGGCGG+GGG 0.285195 4.4:-85726506 None:intergenic
TTTGAAAGATTGGCTTACTA+TGG 0.306366 4.4:+85727625 MS.gene052758:CDS
AAGTTATTGTTGCAGCATTT+AGG 0.328500 4.4:+85728921 MS.gene052758:CDS
GAAGGGAGGGAGCGTAGCGG+CGG 0.344569 4.4:-85726509 None:intergenic
CTCGAAGACCGTTACGGACT+TGG 0.350415 4.4:+85727673 MS.gene052758:CDS
TTGCTTCCTCGGTGTTGGTT+TGG 0.353446 4.4:+85728759 MS.gene052758:CDS
TGACCCCTATTCATATTATC+TGG 0.356962 4.4:-85730471 None:intergenic
GAAGTAAAACCAATTGAAAA+AGG 0.359554 4.4:-85728714 None:intergenic
CACTCTAAGTGTCATCTTCT+GGG 0.360635 4.4:+85730029 MS.gene052758:CDS
ACAAAAGTTACTACAAGAAA+TGG 0.370351 4.4:+85730432 MS.gene052758:CDS
TTCAACAGTATACAGTCAAA+TGG 0.376719 4.4:+85729918 MS.gene052758:CDS
AATTCCCAGGTGTTTGGATA+AGG 0.388688 4.4:+85729765 MS.gene052758:intron
GTCACCTTGATTATTTCTAC+TGG 0.410269 4.4:+85730490 MS.gene052758:CDS
GGATTCCAGATAATATGAAT+AGG 0.414072 4.4:+85730466 MS.gene052758:CDS
TACTTGATTGCGCTTGGAAC+CGG 0.414135 4.4:+85728611 MS.gene052758:CDS
GGAGGGAGCGTAGCGGCGGG+GGG 0.428426 4.4:-85726505 None:intergenic
GTTGCAGCATTTAGGAAACT+TGG 0.431571 4.4:+85728929 MS.gene052758:CDS
CGGTGCACTCATTGCTTCCT+CGG 0.439767 4.4:+85728748 MS.gene052758:CDS
ACTTGACAAATCCTTGTAAG+AGG 0.442092 4.4:-85728902 None:intergenic
GATTCCAGATAATATGAATA+GGG 0.442981 4.4:+85730467 MS.gene052758:CDS
TAAAGAAGAGACTTATCATC+TGG 0.447791 4.4:-85728962 None:intergenic
AAGGGAGGGAGCGTAGCGGC+GGG 0.448074 4.4:-85726508 None:intergenic
ATGAATGTCGGATGGGGATG+GGG 0.453174 4.4:+85728788 MS.gene052758:CDS
ACTCATTGCTTCCTCGGTGT+TGG 0.455639 4.4:+85728754 MS.gene052758:CDS
ATGCATACTTGGGAAGATAC+TGG 0.462100 4.4:+85727776 MS.gene052758:CDS
TGACACTTAGAGTGTCGAAA+AGG 0.462376 4.4:-85730020 None:intergenic
GATGAATGTCGGATGGGGAT+GGG 0.465810 4.4:+85728787 MS.gene052758:CDS
CCTATCGTTGATGCCACAAT+GGG 0.470894 4.4:-85729892 None:intergenic
CTATGGCATGAGTACAAACT+TGG 0.471382 4.4:+85727642 MS.gene052758:CDS
GTACAGAGCCTCCATGGATT+CGG 0.472887 4.4:-85729826 None:intergenic
TGTATCTATTGATTGCTAAG+AGG 0.474542 4.4:+85730547 MS.gene052758:CDS
AGGGAGGGAGCGTAGCGGCG+GGG 0.475042 4.4:-85726507 None:intergenic
AACTATCTCGAAGACCGTTA+CGG 0.475606 4.4:+85727667 MS.gene052758:CDS
AGATGAATGTCGGATGGGGA+TGG 0.477086 4.4:+85728786 MS.gene052758:CDS
GCACTCTACTTGATTGCGCT+TGG 0.477461 4.4:+85728605 MS.gene052758:CDS
AGAGGGATGTAGCAGAAGGG+AGG 0.479969 4.4:-85726523 None:intergenic
ACATCCCTCTCCATCCGCTC+TGG 0.483736 4.4:+85726536 MS.gene052758:CDS
ACTACAAGAAATGGAAGTCT+TGG 0.484536 4.4:+85730441 MS.gene052758:CDS
AATGTCTGCCATCCGACGTC+AGG 0.487051 4.4:+85728560 MS.gene052758:CDS
TGTTACATCACACCATTGCT+TGG 0.490210 4.4:+85727739 MS.gene052758:CDS
TCAACAGTATACAGTCAAAT+GGG 0.492956 4.4:+85729919 MS.gene052758:CDS
GGAACCATGTTTGTGTTACA+AGG 0.495089 4.4:+85729940 MS.gene052758:CDS
CAAGAAATGGAAGTCTTGGT+TGG 0.496663 4.4:+85730445 MS.gene052758:CDS
ACGATGAGACGGTCGTAGAC+CGG 0.502734 4.4:-85730054 None:intergenic
CTGCAAATACTGTCACAACT+TGG 0.505268 4.4:+85727707 MS.gene052758:CDS
CGATGAGACGGTCGTAGACC+GGG 0.505276 4.4:-85730053 None:intergenic
AAGTGTCATCTTCTGGGCCC+CGG 0.506775 4.4:+85730035 MS.gene052758:CDS
AATACTGTCACAACTTGGTC+AGG 0.508375 4.4:+85727712 MS.gene052758:CDS
ATGTAGAATCTAACATCAAA+GGG 0.513359 4.4:+85728996 MS.gene052758:CDS
TAAAAGATGTGCCGAATCCA+TGG 0.514319 4.4:+85729815 MS.gene052758:CDS
GACACTTAGAGTGTCGAAAA+GGG 0.515286 4.4:-85730019 None:intergenic
CGGTGAACTTTCTTGCGAAA+GGG 0.518248 4.4:-85730077 None:intergenic
CCGGTGAACTTTCTTGCGAA+AGG 0.533554 4.4:-85730078 None:intergenic
GATGTAGAATCTAACATCAA+AGG 0.533602 4.4:+85728995 MS.gene052758:CDS
CAGTTTGTCCTGACGTCGGA+TGG 0.535426 4.4:-85728568 None:intergenic
CTGGTGGAAGTCCTCTTACA+AGG 0.537556 4.4:+85728891 MS.gene052758:CDS
TGGAGTGCCTGGAGTTGCAA+TGG 0.539760 4.4:+85728814 MS.gene052758:CDS
GTTACTGTACAGAGCCTCCA+TGG 0.542048 4.4:-85729832 None:intergenic
TGGCCATGCAAAAGCAGTCA+TGG 0.543193 4.4:+85726556 MS.gene052758:CDS
TTGCAGCATTTAGGAAACTT+GGG 0.546918 4.4:+85728930 MS.gene052758:CDS
TTGCGAAAGGGACGATGAGA+CGG 0.547490 4.4:-85730065 None:intergenic
GCCTATCGTTGATGCCACAA+TGG 0.550700 4.4:-85729893 None:intergenic
GAGGGATGTAGCAGAAGGGA+GGG 0.550876 4.4:-85726522 None:intergenic
AATCTAACATCAAAGGGAGC+CGG 0.551381 4.4:+85729002 MS.gene052758:CDS
AACACATGGTTTGATACCGC+CGG 0.557643 4.4:-85728630 None:intergenic
GCGATAACCATTGCAACTCC+AGG 0.558801 4.4:-85728821 None:intergenic
ATGGAGAGGGATGTAGCAGA+AGG 0.559823 4.4:-85726527 None:intergenic
AAAAGGGAGAGGGAAGCTGA+TGG 0.562385 4.4:-85730003 None:intergenic
AAAGCCAGTAGAAATAATCA+AGG 0.566307 4.4:-85730494 None:intergenic
TCACATGAAGGCTTTAGTCC+AGG 0.568348 4.4:-85728533 None:intergenic
GGATACAGATGAATGTCGGA+TGG 0.573725 4.4:+85728780 MS.gene052758:CDS
CGTTCGTTTACTCCCCATTG+TGG 0.581705 4.4:+85729879 MS.gene052758:CDS
GATACAGATGAATGTCGGAT+GGG 0.590289 4.4:+85728781 MS.gene052758:CDS
TTGATTGCGCTTGGAACCGG+CGG 0.592364 4.4:+85728614 MS.gene052758:CDS
CTGTACAGTAACACAAGTAG+AGG 0.593980 4.4:+85729843 MS.gene052758:CDS
CCCATTGTGGCATCAACGAT+AGG 0.595212 4.4:+85729892 MS.gene052758:CDS
CAGTAGAGACAGAATCCGAC+CGG 0.595827 4.4:+85729791 MS.gene052758:CDS
ATGGCCAGAGCGGATGGAGA+GGG 0.595828 4.4:-85726540 None:intergenic
TGGTATAGACTTCAAATACC+TGG 0.596885 4.4:+85728872 MS.gene052758:CDS
TAGAGTGTCGAAAAGGGAGA+GGG 0.597883 4.4:-85730013 None:intergenic
TTAGAGTGTCGAAAAGGGAG+AGG 0.602267 4.4:-85730014 None:intergenic
TGGAGAGGGATGTAGCAGAA+GGG 0.604071 4.4:-85726526 None:intergenic
CATGCAAAAGCAGTCATGGA+AGG 0.608448 4.4:+85726560 MS.gene052758:CDS
CTTGTAAGAGGACTTCCACC+AGG 0.614606 4.4:-85728890 None:intergenic
CATGGCCAGAGCGGATGGAG+AGG 0.618791 4.4:-85726541 None:intergenic
CTGCATTTCCAAGTCCGTAA+CGG 0.628403 4.4:-85727681 None:intergenic
CAGACATTAGAATCACATGA+AGG 0.633687 4.4:-85728545 None:intergenic
ATTCCAGATAATATGAATAG+GGG 0.635841 4.4:+85730468 MS.gene052758:CDS
GTTTGGATACAGATGAATGT+CGG 0.639388 4.4:+85728776 MS.gene052758:CDS
ATACAGATGAATGTCGGATG+GGG 0.656151 4.4:+85728782 MS.gene052758:CDS
AACACAATGGATCAACACAT+TGG 0.661215 4.4:+85729964 MS.gene052758:CDS
ATGAAAACGATGAGACTGAG+AGG 0.663289 4.4:+85728678 MS.gene052758:CDS
TGTGTTACAAGGCAACACAA+TGG 0.665398 4.4:+85729951 MS.gene052758:CDS
TATAGACTTCAAATACCTGG+TGG 0.669427 4.4:+85728875 MS.gene052758:CDS
GCTGCAGTTTGTCCTGACGT+CGG 0.674367 4.4:-85728572 None:intergenic
GATGAGACGGTCGTAGACCG+GGG 0.681272 4.4:-85730052 None:intergenic
GCAGAAGGGAGGGAGCGTAG+CGG 0.685780 4.4:-85726512 None:intergenic
GTTGCCTTGTAACACAAACA+TGG 0.693293 4.4:-85729944 None:intergenic
GCACCAAAAGATGAAACACA+TGG 0.722888 4.4:-85728644 None:intergenic
AAGATGTGCCGAATCCATGG+AGG 0.743597 4.4:+85729818 MS.gene052758:CDS
CTATCGTTGATGCCACAATG+GGG 0.763430 4.4:-85729891 None:intergenic
CTGTATCCAAACCAACACCG+AGG 0.799571 4.4:-85728765 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTGTTAGTTATTATA+AGG - chr4.4:85729748-85729767 None:intergenic 10.0%
!!! TATATTTATTTTTATGATGA+GGG + chr4.4:85729072-85729091 MS.gene052758:intron 10.0%
!!! TTATATTTATTTTTATGATG+AGG + chr4.4:85729071-85729090 MS.gene052758:intron 10.0%
!!! TTGATTTTATATAAACAATA+AGG - chr4.4:85728376-85728395 None:intergenic 10.0%
!!! TTTTTAAACAAAAAATATAG+TGG + chr4.4:85727397-85727416 MS.gene052758:intron 10.0%
!! TATGTTTGAATTTATGAAAA+GGG - chr4.4:85729235-85729254 None:intergenic 15.0%
!!! AGAAAATTTTAATAAAGATC+TGG + chr4.4:85727326-85727345 MS.gene052758:intron 15.0%
!!! ATAAATTTGTTGATATACTA+AGG - chr4.4:85729593-85729612 None:intergenic 15.0%
!!! TTTTACTCAAAATTTGATTT+AGG + chr4.4:85729340-85729359 MS.gene052758:intron 15.0%
!!! TTTTACTTCTCAATTAATAT+CGG + chr4.4:85728728-85728747 MS.gene052758:CDS 15.0%
!!! TTTTTTATAGAAATAGCTTA+GGG + chr4.4:85728411-85728430 MS.gene052758:intron 15.0%
!!! TTTTTTTATAGAAATAGCTT+AGG + chr4.4:85728410-85728429 MS.gene052758:intron 15.0%
!! AAAAAGAAACCTTCAAAATT+TGG - chr4.4:85729542-85729561 None:intergenic 20.0%
!! AAAAATGCTAAACTAATATG+AGG + chr4.4:85728436-85728455 MS.gene052758:intron 20.0%
!! AAAAGAAACCTTCAAAATTT+GGG - chr4.4:85729541-85729560 None:intergenic 20.0%
!! AAAATGCTAAACTAATATGA+GGG + chr4.4:85728437-85728456 MS.gene052758:intron 20.0%
!! AATATGGATTTGAATCATAA+TGG - chr4.4:85727455-85727474 None:intergenic 20.0%
!! ATAGCCTAAAAAAAATCATT+TGG + chr4.4:85727105-85727124 MS.gene052758:intron 20.0%
!! CATCCATTAAAATTTAGTAA+TGG + chr4.4:85727359-85727378 MS.gene052758:intron 20.0%
!! CTAAAAATGTGTTTAAAAGA+GGG + chr4.4:85729465-85729484 MS.gene052758:intron 20.0%
!! CTATGTTTGAATTTATGAAA+AGG - chr4.4:85729236-85729255 None:intergenic 20.0%
!! TCACTTAAAAATAATGCATT+GGG + chr4.4:85730375-85730394 MS.gene052758:intron 20.0%
!! TTCACTTAAAAATAATGCAT+TGG + chr4.4:85730374-85730393 MS.gene052758:intron 20.0%
!! TTTATTGTTAAGCAAAAGTA+TGG - chr4.4:85727954-85727973 None:intergenic 20.0%
!!! AAAAATATAGTGGATTGTAA+TGG + chr4.4:85727407-85727426 MS.gene052758:intron 20.0%
!!! AAATGAATGTTTTGAAAGAT+TGG + chr4.4:85727615-85727634 MS.gene052758:CDS 20.0%
!!! AAATTTAGTAATGGATGAAT+TGG + chr4.4:85727368-85727387 MS.gene052758:intron 20.0%
!!! AAGTCCAAATGATTTTTTTT+AGG - chr4.4:85727112-85727131 None:intergenic 20.0%
!!! ACCATCTTAATATTTGTTTT+GGG - chr4.4:85729314-85729333 None:intergenic 20.0%
!!! ATGAAGTTTAGAATAAGAAA+AGG - chr4.4:85729685-85729704 None:intergenic 20.0%
!!! ATTTTAATAAAGATCTGGAT+AGG + chr4.4:85727331-85727350 MS.gene052758:intron 20.0%
!!! CACTAAAAAACTATTTTAAG+AGG + chr4.4:85727136-85727155 MS.gene052758:intron 20.0%
!!! CATCCATTACTAAATTTTAA+TGG - chr4.4:85727365-85727384 None:intergenic 20.0%
!!! CATTACTAAATTTTAATGGA+TGG - chr4.4:85727361-85727380 None:intergenic 20.0%
!!! CTCTTAAAATAGTTTTTTAG+TGG - chr4.4:85727138-85727157 None:intergenic 20.0%
!!! TACCATCTTAATATTTGTTT+TGG - chr4.4:85729315-85729334 None:intergenic 20.0%
!!! TCATATTAGTTTAGCATTTT+TGG - chr4.4:85728437-85728456 None:intergenic 20.0%
!!! TCTGATTTTGACTTATATAT+AGG + chr4.4:85726967-85726986 MS.gene052758:intron 20.0%
!!! TTTTCAAGAAATTTCAACTA+AGG + chr4.4:85728156-85728175 MS.gene052758:intron 20.0%
! AAAGCAAACATTAGAGTTAA+TGG - chr4.4:85729711-85729730 None:intergenic 25.0%
! AACAAAAACCATGAATCATA+TGG - chr4.4:85729274-85729293 None:intergenic 25.0%
! AATATCTTGATAAGATGGAA+TGG + chr4.4:85729161-85729180 MS.gene052758:intron 25.0%
! ACAAAAGTTACTACAAGAAA+TGG + chr4.4:85730432-85730451 MS.gene052758:CDS 25.0%
! ACCGATGAAGAAAAATATAA+TGG - chr4.4:85728846-85728865 None:intergenic 25.0%
! ACTTATATATAGGACATGTT+CGG + chr4.4:85726977-85726996 MS.gene052758:intron 25.0%
! AGATTATATTTGTCGAACAA+AGG + chr4.4:85727024-85727043 MS.gene052758:intron 25.0%
! ATAACTAACAAAAAATTCCC+AGG + chr4.4:85729752-85729771 MS.gene052758:intron 25.0%
! ATCATACAATGTTAGGATTT+CGG + chr4.4:85726882-85726901 MS.gene052758:intron 25.0%
! ATGGATGAATTGAATGAATA+TGG - chr4.4:85727471-85727490 None:intergenic 25.0%
! ATGTAGAATCTAACATCAAA+GGG + chr4.4:85728996-85729015 MS.gene052758:CDS 25.0%
! CCTAAAAATGTGTTTAAAAG+AGG + chr4.4:85729464-85729483 MS.gene052758:intron 25.0%
! GAAGTAAAACCAATTGAAAA+AGG - chr4.4:85728717-85728736 None:intergenic 25.0%
! TCTCATGTATATAGAGATTA+CGG + chr4.4:85729135-85729154 MS.gene052758:intron 25.0%
! TCTGTCTACATTCTTTATAA+TGG - chr4.4:85729651-85729670 None:intergenic 25.0%
! TTTGAATTTATGAAAAGGGA+TGG - chr4.4:85729231-85729250 None:intergenic 25.0%
!! ATTCATGGTTTTTGTTGATA+GGG + chr4.4:85729278-85729297 MS.gene052758:intron 25.0%
!! CCTCTTTTAAACACATTTTT+AGG - chr4.4:85729467-85729486 None:intergenic 25.0%
!! GCCATTATATTTTTCTTCAT+CGG + chr4.4:85728842-85728861 MS.gene052758:CDS 25.0%
!!! ATTCTTTATAATGGATGTGA+AGG - chr4.4:85729642-85729661 None:intergenic 25.0%
AAAGCCAGTAGAAATAATCA+AGG - chr4.4:85730497-85730516 None:intergenic 30.0%
AAATTATGCCAAATTGTGAC+AGG - chr4.4:85728021-85728040 None:intergenic 30.0%
AAGTTATTGTTGCAGCATTT+AGG + chr4.4:85728921-85728940 MS.gene052758:CDS 30.0%
AATTCAAACATAGACTTAGC+AGG + chr4.4:85729243-85729262 MS.gene052758:intron 30.0%
AATTGTTAGAATAACAACGC+TGG - chr4.4:85727556-85727575 None:intergenic 30.0%
ACAAAAAAGTGACTCATCTT+AGG + chr4.4:85730577-85730596 MS.gene052758:CDS 30.0%
AGAGAGAGAGAGATTTATAT+TGG + chr4.4:85727273-85727292 MS.gene052758:intron 30.0%
AGGTAATTCCATATGATTCA+TGG + chr4.4:85729263-85729282 MS.gene052758:intron 30.0%
ATCACACTAAAAATTGTTGC+AGG + chr4.4:85727592-85727611 MS.gene052758:CDS 30.0%
CAGATCATTACTATCAAGTT+AGG + chr4.4:85728195-85728214 MS.gene052758:intron 30.0%
CAGTTATATTTAAATGTCCG+AGG + chr4.4:85727911-85727930 MS.gene052758:intron 30.0%
GAAAAATTGAAACCGTTCAA+GGG + chr4.4:85726935-85726954 MS.gene052758:intron 30.0%
GAACAAAATTTCTCATGGTT+CGG - chr4.4:85726714-85726733 None:intergenic 30.0%
GATGTAGAATCTAACATCAA+AGG + chr4.4:85728995-85729014 MS.gene052758:CDS 30.0%
GATTCAAGTAGAAAAAGAGA+AGG - chr4.4:85729571-85729590 None:intergenic 30.0%
GCCCAAAACAAATATTAAGA+TGG + chr4.4:85729310-85729329 MS.gene052758:intron 30.0%
GGCATAATATCTTGATAAGA+TGG + chr4.4:85729156-85729175 MS.gene052758:intron 30.0%
TAAAGAAGAGACTTATCATC+TGG - chr4.4:85728965-85728984 None:intergenic 30.0%
TAACATTGTATGATTCTTGC+CGG - chr4.4:85726876-85726895 None:intergenic 30.0%
TCAACAGTATACAGTCAAAT+GGG + chr4.4:85729919-85729938 MS.gene052758:CDS 30.0%
TCGGATTGTAAGGTTATAAA+TGG - chr4.4:85729493-85729512 None:intergenic 30.0%
TTACCGAACAAAATTTCTCA+TGG - chr4.4:85726719-85726738 None:intergenic 30.0%
TTCAACAGTATACAGTCAAA+TGG + chr4.4:85729918-85729937 MS.gene052758:CDS 30.0%
TTTATGAAAAGGGATGGAAT+AGG - chr4.4:85729225-85729244 None:intergenic 30.0%
TTTGAACTAGAAGACAATGT+TGG + chr4.4:85728040-85728059 MS.gene052758:intron 30.0%
! AAACCATGTGTTTCATCTTT+TGG + chr4.4:85728641-85728660 MS.gene052758:CDS 30.0%
! AATGTTAGGATTTCGGATTT+TGG + chr4.4:85726889-85726908 MS.gene052758:intron 30.0%
! AGCATCTTAATAGTTGGTTT+AGG - chr4.4:85729366-85729385 None:intergenic 30.0%
! ATTCAATTCATCCATTTTGC+CGG + chr4.4:85727476-85727495 MS.gene052758:intron 30.0%
! CAAGTAGAGTGCTATAAAAA+GGG - chr4.4:85728597-85728616 None:intergenic 30.0%
! GAACCATGAGAAATTTTGTT+CGG + chr4.4:85726713-85726732 MS.gene052758:intron 30.0%
! GATTCATGGTTTTTGTTGAT+AGG + chr4.4:85729277-85729296 MS.gene052758:intron 30.0%
! GCTGATGGAATTTTGAATTT+AGG - chr4.4:85729991-85730010 None:intergenic 30.0%
! TCAAGTAGAGTGCTATAAAA+AGG - chr4.4:85728598-85728617 None:intergenic 30.0%
! TCTCATCGTTTTCATCAAAT+TGG - chr4.4:85728673-85728692 None:intergenic 30.0%
! TGGATTTGAATCATAATGGA+TGG - chr4.4:85727451-85727470 None:intergenic 30.0%
! TGTATCTATTGATTGCTAAG+AGG + chr4.4:85730547-85730566 MS.gene052758:CDS 30.0%
! TTTGTTGATAGGGTTGATTT+AGG + chr4.4:85729288-85729307 MS.gene052758:intron 30.0%
! TTTTCATAAGCTATCCTGAA+GGG - chr4.4:85728343-85728362 None:intergenic 30.0%
!! ATCCTTTTTGAGCAAAAAAC+CGG + chr4.4:85726854-85726873 MS.gene052758:intron 30.0%
!! TCTTAGCACTAGTTTCATTT+TGG + chr4.4:85728094-85728113 MS.gene052758:intron 30.0%
!! TTTGAAAGATTGGCTTACTA+TGG + chr4.4:85727625-85727644 MS.gene052758:CDS 30.0%
!!! AGAAAAGCTCCTTTTTCAAT+TGG + chr4.4:85728705-85728724 MS.gene052758:CDS 30.0%
!!! GATCATAGTAGTTGTTTTTG+CGG - chr4.4:85730212-85730231 None:intergenic 30.0%
!!! TTTTTAGCTGATGCATACTT+GGG + chr4.4:85727766-85727785 MS.gene052758:CDS 30.0%
AACACAATGGATCAACACAT+TGG + chr4.4:85729964-85729983 MS.gene052758:CDS 35.0%
ACAAAAAATTCCCAGGTGTT+TGG + chr4.4:85729759-85729778 MS.gene052758:intron 35.0%
ACAATCCGATTCTGTAGAAT+TGG + chr4.4:85729504-85729523 MS.gene052758:intron 35.0%
ACTACAAGAAATGGAAGTCT+TGG + chr4.4:85730441-85730460 MS.gene052758:CDS 35.0%
ACTCAAACATTGAGAAATCG+AGG + chr4.4:85726783-85726802 MS.gene052758:intron 35.0%
ACTTGACAAATCCTTGTAAG+AGG - chr4.4:85728905-85728924 None:intergenic 35.0%
AGATGCTAGGTTTAGTTGTT+TGG - chr4.4:85729201-85729220 None:intergenic 35.0%
ATGAGGGAAAGACATGTTAA+TGG + chr4.4:85728453-85728472 MS.gene052758:intron 35.0%
ATTGTGACAGGAGTAAAGAT+AGG - chr4.4:85728009-85728028 None:intergenic 35.0%
CAAGTATGCATCAGCTAAAA+AGG - chr4.4:85727767-85727786 None:intergenic 35.0%
CAATCCGATTCTGTAGAATT+GGG + chr4.4:85729505-85729524 MS.gene052758:intron 35.0%
CAGACATTAGAATCACATGA+AGG - chr4.4:85728548-85728567 None:intergenic 35.0%
CTAACCCAATTCTACAGAAT+CGG - chr4.4:85729512-85729531 None:intergenic 35.0%
CTCAAACATTGAGAAATCGA+GGG + chr4.4:85726784-85726803 MS.gene052758:intron 35.0%
GATATTAGTGAAAACTTCCG+CGG - chr4.4:85730292-85730311 None:intergenic 35.0%
GGAAAAATTGAAACCGTTCA+AGG + chr4.4:85726934-85726953 MS.gene052758:intron 35.0%
GGCAAGAATCATACAATGTT+AGG + chr4.4:85726875-85726894 MS.gene052758:intron 35.0%
GTTTGGATACAGATGAATGT+CGG + chr4.4:85728776-85728795 MS.gene052758:CDS 35.0%
TATAGACTTCAAATACCTGG+TGG + chr4.4:85728875-85728894 MS.gene052758:CDS 35.0%
TCAAGTGTGTCAGTCATAAA+AGG - chr4.4:85728222-85728241 None:intergenic 35.0%
TCGGATAGCATCTTAATAGT+TGG - chr4.4:85729372-85729391 None:intergenic 35.0%
TCTTTACTCCTGTCACAATT+TGG + chr4.4:85728010-85728029 MS.gene052758:intron 35.0%
TGATGTTGCATGTTGCAATA+TGG - chr4.4:85726615-85726634 None:intergenic 35.0%
TGGTATAGACTTCAAATACC+TGG + chr4.4:85728872-85728891 MS.gene052758:CDS 35.0%
TTCACACAGCTTCAAAGAAT+CGG + chr4.4:85730114-85730133 MS.gene052758:intron 35.0%
TTCTACAGAATCGGATTGTA+AGG - chr4.4:85729503-85729522 None:intergenic 35.0%
TTGCAGCATTTAGGAAACTT+GGG + chr4.4:85728930-85728949 MS.gene052758:CDS 35.0%
TTTCACTAATATCGGTCAGA+TGG + chr4.4:85730299-85730318 MS.gene052758:intron 35.0%
! AGACTCAACCCAAATTTTGA+AGG + chr4.4:85729530-85729549 MS.gene052758:intron 35.0%
! CATTTGTGTGTTCAAGTTTC+CGG - chr4.4:85729024-85729043 None:intergenic 35.0%
! CTTTTCATAAGCTATCCTGA+AGG - chr4.4:85728344-85728363 None:intergenic 35.0%
! GCGGAAGTTTTCACTAATAT+CGG + chr4.4:85730291-85730310 MS.gene052758:intron 35.0%
! TTGTCGAACAAAGGTAGTTT+TGG + chr4.4:85727033-85727052 MS.gene052758:intron 35.0%
! TTTTCTTCATCGGTAGTAGA+TGG + chr4.4:85728852-85728871 MS.gene052758:CDS 35.0%
!! ATCCTTTTGAGTATGAACCT+CGG - chr4.4:85727931-85727950 None:intergenic 35.0%
!! GTCACCTTGATTATTTCTAC+TGG + chr4.4:85730490-85730509 MS.gene052758:CDS 35.0%
!! TTAGGATTTCGGATTTTGGT+GGG + chr4.4:85726893-85726912 MS.gene052758:intron 35.0%
!!! ACACAAGCATATGCTGTTTT+TGG - chr4.4:85726674-85726693 None:intergenic 35.0%
!!! CACAAGCATATGCTGTTTTT+GGG - chr4.4:85726673-85726692 None:intergenic 35.0%
!!! CTTTTTAGCTGATGCATACT+TGG + chr4.4:85727765-85727784 MS.gene052758:CDS 35.0%
AACTATCTCGAAGACCGTTA+CGG + chr4.4:85727667-85727686 MS.gene052758:CDS 40.0%
AAGCATTTGTGAGACTGTTC+CGG + chr4.4:85728258-85728277 MS.gene052758:intron 40.0%
AATACTGTCACAACTTGGTC+AGG + chr4.4:85727712-85727731 MS.gene052758:CDS 40.0%
AATCTAACATCAAAGGGAGC+CGG + chr4.4:85729002-85729021 MS.gene052758:CDS 40.0%
AATTCCCAGGTGTTTGGATA+AGG + chr4.4:85729765-85729784 MS.gene052758:intron 40.0%
AATTGAAACCGTTCAAGGGA+TGG + chr4.4:85726939-85726958 MS.gene052758:intron 40.0%
ACACTCTAAGTGTCATCTTC+TGG + chr4.4:85730028-85730047 MS.gene052758:CDS 40.0%
ACTTGCCATAAGATCGACAT+AGG - chr4.4:85730246-85730265 None:intergenic 40.0%
AGCTGAAACAGCTTATTGAC+AGG - chr4.4:85728308-85728327 None:intergenic 40.0%
AGGTAATGTCTCATCCATTG+TGG - chr4.4:85729447-85729466 None:intergenic 40.0%
AGTCTCACAAATGCTTATGC+AGG - chr4.4:85728254-85728273 None:intergenic 40.0%
ATACAGATGAATGTCGGATG+GGG + chr4.4:85728782-85728801 MS.gene052758:CDS 40.0%
ATGAAAACGATGAGACTGAG+AGG + chr4.4:85728678-85728697 MS.gene052758:CDS 40.0%
ATGCATACTTGGGAAGATAC+TGG + chr4.4:85727776-85727795 MS.gene052758:CDS 40.0%
ATGTTGCAATATGGACCACT+TGG - chr4.4:85726606-85726625 None:intergenic 40.0%
ATTGAAACCGTTCAAGGGAT+GGG + chr4.4:85726940-85726959 MS.gene052758:intron 40.0%
CAAGAAATGGAAGTCTTGGT+TGG + chr4.4:85730445-85730464 MS.gene052758:CDS 40.0%
CACAAACTTCTCATAGCATC+AGG - chr4.4:85730345-85730364 None:intergenic 40.0%
CACTCTAAGTGTCATCTTCT+GGG + chr4.4:85730029-85730048 MS.gene052758:CDS 40.0%
CAGCTTCAAAGAATCGGAAT+CGG + chr4.4:85730120-85730139 MS.gene052758:intron 40.0%
CATACATCTGCAGTGTGAAT+CGG - chr4.4:85729391-85729410 None:intergenic 40.0%
CTATGGCATGAGTACAAACT+TGG + chr4.4:85727642-85727661 MS.gene052758:CDS 40.0%
CTGCAAATACTGTCACAACT+TGG + chr4.4:85727707-85727726 MS.gene052758:CDS 40.0%
CTGTACAGTAACACAAGTAG+AGG + chr4.4:85729843-85729862 MS.gene052758:CDS 40.0%
CTTATTTCCATAAGCCCTTC+AGG + chr4.4:85728326-85728345 MS.gene052758:intron 40.0%
CTTGCCATAAGATCGACATA+GGG - chr4.4:85730245-85730264 None:intergenic 40.0%
GATACAGATGAATGTCGGAT+GGG + chr4.4:85728781-85728800 MS.gene052758:CDS 40.0%
GCACCAAAAGATGAAACACA+TGG - chr4.4:85728647-85728666 None:intergenic 40.0%
GGAACCATGTTTGTGTTACA+AGG + chr4.4:85729940-85729959 MS.gene052758:CDS 40.0%
GGTAATGTCTCATCCATTGT+GGG - chr4.4:85729446-85729465 None:intergenic 40.0%
GTTGCAGCATTTAGGAAACT+TGG + chr4.4:85728929-85728948 MS.gene052758:CDS 40.0%
GTTGCCTTGTAACACAAACA+TGG - chr4.4:85729947-85729966 None:intergenic 40.0%
TAAAAGATGTGCCGAATCCA+TGG + chr4.4:85729815-85729834 MS.gene052758:CDS 40.0%
TCACAAATGCTTATGCAGGT+AGG - chr4.4:85728250-85728269 None:intergenic 40.0%
TCTCTGTCATCGAACATGTT+CGG - chr4.4:85726749-85726768 None:intergenic 40.0%
TGTGTTACAAGGCAACACAA+TGG + chr4.4:85729951-85729970 MS.gene052758:CDS 40.0%
TGTTACATCACACCATTGCT+TGG + chr4.4:85727739-85727758 MS.gene052758:CDS 40.0%
! ACATTTTCTGCAATTGCACC+TGG + chr4.4:85728515-85728534 MS.gene052758:CDS 40.0%
! ATGTATGGTCTTTGCTGTGA+TGG + chr4.4:85729404-85729423 MS.gene052758:intron 40.0%
! CAGCATATGCTTGTGTTGTT+CGG + chr4.4:85726678-85726697 MS.gene052758:intron 40.0%
! GATGGAGTTCTTTTATGGTC+AGG + chr4.4:85730317-85730336 MS.gene052758:intron 40.0%
! GATTCGGCACATCTTTTATC+CGG - chr4.4:85729813-85729832 None:intergenic 40.0%
! GGTCAGATGGAGTTCTTTTA+TGG + chr4.4:85730312-85730331 MS.gene052758:intron 40.0%
! GTTAGGATTTCGGATTTTGG+TGG + chr4.4:85726892-85726911 MS.gene052758:intron 40.0%
!! ATGTTAAAAGTGCCATTCCC+TGG - chr4.4:85728499-85728518 None:intergenic 40.0%
!! GACACTTAGAGTGTCGAAAA+GGG - chr4.4:85730022-85730041 None:intergenic 40.0%
!! TGACACTTAGAGTGTCGAAA+AGG - chr4.4:85730023-85730042 None:intergenic 40.0%
!! TGTTAAAAGTGCCATTCCCT+GGG - chr4.4:85728498-85728517 None:intergenic 40.0%
!!! TGCCGGTTTTTTGCTCAAAA+AGG - chr4.4:85726859-85726878 None:intergenic 40.0%
AACACATGGTTTGATACCGC+CGG - chr4.4:85728633-85728652 None:intergenic 45.0%
AAGCTATCCTGAAGGGCTTA+TGG - chr4.4:85728336-85728355 None:intergenic 45.0%
AGAAACTCCCATCCCTTGAA+CGG - chr4.4:85726950-85726969 None:intergenic 45.0%
ATCATTTCCATGATCGTGGC+AGG + chr4.4:85730156-85730175 MS.gene052758:intron 45.0%
CATGCAAAAGCAGTCATGGA+AGG + chr4.4:85726560-85726579 MS.gene052758:CDS 45.0%
CCATAAGATCGACATAGGGA+TGG - chr4.4:85730241-85730260 None:intergenic 45.0%
CCATCCCTATGTCGATCTTA+TGG + chr4.4:85730238-85730257 MS.gene052758:intron 45.0%
CCTATCGTTGATGCCACAAT+GGG - chr4.4:85729895-85729914 None:intergenic 45.0%
CCTTTCGCAAGAAAGTTCAC+CGG + chr4.4:85730078-85730097 MS.gene052758:intron 45.0%
CGATTCACACTGCAGATGTA+TGG + chr4.4:85729389-85729408 MS.gene052758:intron 45.0%
CGGTGAACTTTCTTGCGAAA+GGG - chr4.4:85730080-85730099 None:intergenic 45.0%
CGTTGTTTGTGTACTTCCCA+GGG + chr4.4:85728479-85728498 MS.gene052758:intron 45.0%
CTATCGTTGATGCCACAATG+GGG - chr4.4:85729894-85729913 None:intergenic 45.0%
CTCCATCATTTCCATGATCG+TGG + chr4.4:85730152-85730171 MS.gene052758:intron 45.0%
CTGCATTTCCAAGTCCGTAA+CGG - chr4.4:85727684-85727703 None:intergenic 45.0%
GAACACATGACCAATTGTGC+CGG - chr4.4:85727498-85727517 None:intergenic 45.0%
GCTAAAAAGGCTCCAAGCAA+TGG - chr4.4:85727754-85727773 None:intergenic 45.0%
GGATACAGATGAATGTCGGA+TGG + chr4.4:85728780-85728799 MS.gene052758:CDS 45.0%
GGATGGAATAGGAAGATGCT+AGG - chr4.4:85729214-85729233 None:intergenic 45.0%
GGGTGAGAGAAGTTTGGATA+AGG + chr4.4:85726913-85726932 MS.gene052758:intron 45.0%
GTCCGAGGTTCATACTCAAA+AGG + chr4.4:85727926-85727945 MS.gene052758:intron 45.0%
TACTTGATTGCGCTTGGAAC+CGG + chr4.4:85728611-85728630 MS.gene052758:CDS 45.0%
TCATTTCCATGATCGTGGCA+GGG + chr4.4:85730157-85730176 MS.gene052758:intron 45.0%
TCGTTGTTTGTGTACTTCCC+AGG + chr4.4:85728478-85728497 MS.gene052758:intron 45.0%
TGCCACGATCATGGAAATGA+TGG - chr4.4:85730157-85730176 None:intergenic 45.0%
TGGAAGGTCTGTTGTTCCTA+AGG + chr4.4:85726576-85726595 MS.gene052758:intron 45.0%
TTTGTGTACTTCCCAGGGAA+TGG + chr4.4:85728484-85728503 MS.gene052758:intron 45.0%
! AGTTGTTTCCATAAGCGCTC+CGG - chr4.4:85728280-85728299 None:intergenic 45.0%
! ATCCATTTTGCCGGCACAAT+TGG + chr4.4:85727485-85727504 MS.gene052758:intron 45.0%
! TCACATGAAGGCTTTAGTCC+AGG - chr4.4:85728536-85728555 None:intergenic 45.0%
! TGGAAATGATGGAGATGACC+AGG - chr4.4:85730146-85730165 None:intergenic 45.0%
! TTTGGTGGGTGAGAGAAGTT+TGG + chr4.4:85726907-85726926 MS.gene052758:intron 45.0%
!! CTTCCATGACTGCTTTTGCA+TGG - chr4.4:85726562-85726581 None:intergenic 45.0%
!! TAGAGTGTCGAAAAGGGAGA+GGG - chr4.4:85730016-85730035 None:intergenic 45.0%
!! TGTTTTTGCGGACAATGTCG+AGG - chr4.4:85730200-85730219 None:intergenic 45.0%
!! TTAGAGTGTCGAAAAGGGAG+AGG - chr4.4:85730017-85730036 None:intergenic 45.0%
!! CATAAAAATAAATATAAAAA+TGG - chr4.4:85729068-85729087 None:intergenic 5.0%
AAAAGGGAGAGGGAAGCTGA+TGG - chr4.4:85730006-85730025 None:intergenic 50.0%
AAGATGTGCCGAATCCATGG+AGG + chr4.4:85729818-85729837 MS.gene052758:CDS 50.0%
AAGTTCACCGGCCATGAACA+CGG + chr4.4:85730090-85730109 MS.gene052758:intron 50.0%
AGAACGCGCGAGTAACACAT+GGG + chr4.4:85727070-85727089 MS.gene052758:intron 50.0%
AGATGAATGTCGGATGGGGA+TGG + chr4.4:85728786-85728805 MS.gene052758:CDS 50.0%
ATGAATGTCGGATGGGGATG+GGG + chr4.4:85728788-85728807 MS.gene052758:CDS 50.0%
ATGGAGAGGGATGTAGCAGA+AGG - chr4.4:85726530-85726549 None:intergenic 50.0%
CACCTACGAGGAAATACTGC+GGG - chr4.4:85730269-85730288 None:intergenic 50.0%
CAGTAGAGACAGAATCCGAC+CGG + chr4.4:85729791-85729810 MS.gene052758:CDS 50.0%
CCCATTGTGGCATCAACGAT+AGG + chr4.4:85729892-85729911 MS.gene052758:CDS 50.0%
CCGGTGAACTTTCTTGCGAA+AGG - chr4.4:85730081-85730100 None:intergenic 50.0%
CGTTCGTTTACTCCCCATTG+TGG + chr4.4:85729879-85729898 MS.gene052758:CDS 50.0%
CTGGTGGAAGTCCTCTTACA+AGG + chr4.4:85728891-85728910 MS.gene052758:CDS 50.0%
CTGTATCCAAACCAACACCG+AGG - chr4.4:85728768-85728787 None:intergenic 50.0%
CTTGTAAGAGGACTTCCACC+AGG - chr4.4:85728893-85728912 None:intergenic 50.0%
GATGAATGTCGGATGGGGAT+GGG + chr4.4:85728787-85728806 MS.gene052758:CDS 50.0%
GCACCTACGAGGAAATACTG+CGG - chr4.4:85730270-85730289 None:intergenic 50.0%
GCACTCTACTTGATTGCGCT+TGG + chr4.4:85728605-85728624 MS.gene052758:CDS 50.0%
GCCTATCGTTGATGCCACAA+TGG - chr4.4:85729896-85729915 None:intergenic 50.0%
GCGATAACCATTGCAACTCC+AGG - chr4.4:85728824-85728843 None:intergenic 50.0%
GCTGCCTTATCCAAACACCT+GGG - chr4.4:85729772-85729791 None:intergenic 50.0%
GCTGTGTGAATCCGTGTTCA+TGG - chr4.4:85730104-85730123 None:intergenic 50.0%
GTACAGAGCCTCCATGGATT+CGG - chr4.4:85729829-85729848 None:intergenic 50.0%
GTGTTGAGAGAGTCCCACAA+TGG + chr4.4:85729430-85729449 MS.gene052758:intron 50.0%
GTTACTGTACAGAGCCTCCA+TGG - chr4.4:85729835-85729854 None:intergenic 50.0%
TAGAACGCGCGAGTAACACA+TGG + chr4.4:85727069-85727088 MS.gene052758:intron 50.0%
TCAAAGAATCGGAATCGGCC+TGG + chr4.4:85730125-85730144 MS.gene052758:intron 50.0%
TGCTGCCTTATCCAAACACC+TGG - chr4.4:85729773-85729792 None:intergenic 50.0%
TGGAGAGGGATGTAGCAGAA+GGG - chr4.4:85726529-85726548 None:intergenic 50.0%
TGGCCATGCAAAAGCAGTCA+TGG + chr4.4:85726556-85726575 MS.gene052758:CDS 50.0%
TGTGAATCCGTGTTCATGGC+CGG - chr4.4:85730100-85730119 None:intergenic 50.0%
TGTTCCTAAGGCAGTCCAAG+TGG + chr4.4:85726588-85726607 MS.gene052758:intron 50.0%
TTGCGAAAGGGACGATGAGA+CGG - chr4.4:85730068-85730087 None:intergenic 50.0%
! ACTCATTGCTTCCTCGGTGT+TGG + chr4.4:85728754-85728773 MS.gene052758:CDS 50.0%
! CGGCACATCTTTTATCCGGT+CGG - chr4.4:85729809-85729828 None:intergenic 50.0%
! GACCAATTGTGCCGGCAAAA+TGG - chr4.4:85727490-85727509 None:intergenic 50.0%
! TTTTGCGGACAATGTCGAGG+CGG - chr4.4:85730197-85730216 None:intergenic 50.0%
!! TTGCTTCCTCGGTGTTGGTT+TGG + chr4.4:85728759-85728778 MS.gene052758:CDS 50.0%
AAGTGTCATCTTCTGGGCCC+CGG + chr4.4:85730035-85730054 MS.gene052758:CDS 55.0%
AATGTCTGCCATCCGACGTC+AGG + chr4.4:85728560-85728579 MS.gene052758:CDS 55.0%
ACGATGAGACGGTCGTAGAC+CGG - chr4.4:85730057-85730076 None:intergenic 55.0%
AGAGGGATGTAGCAGAAGGG+AGG - chr4.4:85726526-85726545 None:intergenic 55.0%
CAGTTTGTCCTGACGTCGGA+TGG - chr4.4:85728571-85728590 None:intergenic 55.0%
CGGTGCACTCATTGCTTCCT+CGG + chr4.4:85728748-85728767 MS.gene052758:CDS 55.0%
CTCGAAGACCGTTACGGACT+TGG + chr4.4:85727673-85727692 MS.gene052758:CDS 55.0%
GAACGCGCGAGTAACACATG+GGG + chr4.4:85727071-85727090 MS.gene052758:intron 55.0%
GAGGGATGTAGCAGAAGGGA+GGG - chr4.4:85726525-85726544 None:intergenic 55.0%
GCTGCAGTTTGTCCTGACGT+CGG - chr4.4:85728575-85728594 None:intergenic 55.0%
GTCCCGCAGTATTTCCTCGT+AGG + chr4.4:85730264-85730283 MS.gene052758:intron 55.0%
TAGAGTCCCTGCCACGATCA+TGG - chr4.4:85730166-85730185 None:intergenic 55.0%
TGGACCACTTGGACTGCCTT+AGG - chr4.4:85726595-85726614 None:intergenic 55.0%
TTGATTGCGCTTGGAACCGG+CGG + chr4.4:85728614-85728633 MS.gene052758:CDS 55.0%
! AGACTGTTCCGGAGCGCTTA+TGG + chr4.4:85728269-85728288 MS.gene052758:intron 55.0%
! GTATTTCCTCGTAGGTGCCG+CGG + chr4.4:85730272-85730291 MS.gene052758:intron 55.0%
! TGGAGTGCCTGGAGTTGCAA+TGG + chr4.4:85728814-85728833 MS.gene052758:CDS 55.0%
! TTTTGCATGGCCAGAGCGGA+TGG - chr4.4:85726549-85726568 None:intergenic 55.0%
!! CTGCTTTTGCATGGCCAGAG+CGG - chr4.4:85726553-85726572 None:intergenic 55.0%
AAACTTCCGCGGCACCTACG+AGG - chr4.4:85730281-85730300 None:intergenic 60.0%
ACATCCCTCTCCATCCGCTC+TGG + chr4.4:85726536-85726555 MS.gene052758:CDS 60.0%
ATGGCCAGAGCGGATGGAGA+GGG - chr4.4:85726543-85726562 None:intergenic 60.0%
CGATGAGACGGTCGTAGACC+GGG - chr4.4:85730056-85730075 None:intergenic 60.0%
GATGAGACGGTCGTAGACCG+GGG - chr4.4:85730055-85730074 None:intergenic 60.0%
GCGCGAGTAACACATGGGGT+GGG + chr4.4:85727075-85727094 MS.gene052758:intron 60.0%
! GTCGGATGGGGATGGGGTTT+TGG + chr4.4:85728794-85728813 MS.gene052758:CDS 60.0%
!!! GGATGGGGTTTTGGAGTGCC+TGG + chr4.4:85728803-85728822 MS.gene052758:CDS 60.0%
CATGGCCAGAGCGGATGGAG+AGG - chr4.4:85726544-85726563 None:intergenic 65.0%
CGCGCGAGTAACACATGGGG+TGG + chr4.4:85727074-85727093 MS.gene052758:intron 65.0%
! GCAGAAGGGAGGGAGCGTAG+CGG - chr4.4:85726515-85726534 None:intergenic 65.0%
! AAGGGAGGGAGCGTAGCGGC+GGG - chr4.4:85726511-85726530 None:intergenic 70.0%
! GAAGGGAGGGAGCGTAGCGG+CGG - chr4.4:85726512-85726531 None:intergenic 70.0%
CGTAGCGGCGGGGGGAGCTA+GGG - chr4.4:85726500-85726519 None:intergenic 75.0%
GCGGGGGGAGCTAGGGGAAG+GGG - chr4.4:85726493-85726512 None:intergenic 75.0%
GGCGGGGGGAGCTAGGGGAA+GGG - chr4.4:85726494-85726513 None:intergenic 75.0%
GTAGCGGCGGGGGGAGCTAG+GGG - chr4.4:85726499-85726518 None:intergenic 75.0%
! AGGGAGGGAGCGTAGCGGCG+GGG - chr4.4:85726510-85726529 None:intergenic 75.0%
! CGGCGGGGGGAGCTAGGGGA+AGG - chr4.4:85726495-85726514 None:intergenic 80.0%
! GCGTAGCGGCGGGGGGAGCT+AGG - chr4.4:85726501-85726520 None:intergenic 80.0%
!! GGAGGGAGCGTAGCGGCGGG+GGG - chr4.4:85726508-85726527 None:intergenic 80.0%
!! GGGAGGGAGCGTAGCGGCGG+GGG - chr4.4:85726509-85726528 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 85726483 85730602 85726483 ID=MS.gene052758
chr4.4 mRNA 85726483 85730602 85726483 ID=MS.gene052758.t1;Parent=MS.gene052758
chr4.4 exon 85726483 85726581 85726483 ID=MS.gene052758.t1.exon1;Parent=MS.gene052758.t1
chr4.4 CDS 85726483 85726581 85726483 ID=cds.MS.gene052758.t1;Parent=MS.gene052758.t1
chr4.4 exon 85727586 85727831 85727586 ID=MS.gene052758.t1.exon2;Parent=MS.gene052758.t1
chr4.4 CDS 85727586 85727831 85727586 ID=cds.MS.gene052758.t1;Parent=MS.gene052758.t1
chr4.4 exon 85728500 85729050 85728500 ID=MS.gene052758.t1.exon3;Parent=MS.gene052758.t1
chr4.4 CDS 85728500 85729050 85728500 ID=cds.MS.gene052758.t1;Parent=MS.gene052758.t1
chr4.4 exon 85729774 85730091 85729774 ID=MS.gene052758.t1.exon4;Parent=MS.gene052758.t1
chr4.4 CDS 85729774 85730091 85729774 ID=cds.MS.gene052758.t1;Parent=MS.gene052758.t1
chr4.4 exon 85730410 85730602 85730410 ID=MS.gene052758.t1.exon5;Parent=MS.gene052758.t1
chr4.4 CDS 85730410 85730602 85730410 ID=cds.MS.gene052758.t1;Parent=MS.gene052758.t1
Gene Sequence

>MS.gene052758

ATGGCGGCCCCTTCCCCTAGCTCCCCCCGCCGCTACGCTCCCTCCCTTCTGCTACATCCCTCTCCATCCGCTCTGGCCATGCAAAAGCAGTCATGGAAGGTCTGTTGTTCCTAAGGCAGTCCAAGTGGTCCATATTGCAACATGCAACATCACACGTACAAACAATTAACAAAAATCAACAAAAATACCCAAAAACAGCATATGCTTGTGTTGTTCGGATTATATTTACCGAACCATGAGAAATTTTGTTCGGTAAATATAATCCGAACATGTTCGATGACAGAGAAAGAAAAAAATGTGACTCAAACATTGAGAAATCGAGGGAGTGATATCTTACGCTGAGTTTGTTGTTTGAAAATGCTTGAAATATGATCCTTTTTGAGCAAAAAACCGGCAAGAATCATACAATGTTAGGATTTCGGATTTTGGTGGGTGAGAGAAGTTTGGATAAGGAAAAATTGAAACCGTTCAAGGGATGGGAGTTTCTGATTTTGACTTATATATAGGACATGTTCGGAAAATATAATCTGAACTGTAATTCAGATTATATTTGTCGAACAAAGGTAGTTTTGGAAAGAAAAAAAAATAGAACGCGCGAGTAACACATGGGGTGGGAAAAATAATAGCCTAAAAAAAATCATTTGGACTTAATCCACTAAAAAACTATTTTAAGAGGTTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTTATATTGGTAAAAAAATAATTAATTTTTTTTGTCAAAAAGAAAATTTTAATAAAGATCTGGATAGGATATCCATCCATTAAAATTTAGTAATGGATGAATTGGATGATTTTTTTAAACAAAAAATATAGTGGATTGTAATGGACTAATAGATTTTTTGATCCATCCATTATGATTCAAATCCATATTCATTCAATTCATCCATTTTGCCGGCACAATTGGTCATGTGTTCTCTGTTTGCTTTTTTAGTATATACTTACTTTTTAACCAGCGTTGTTATTCTAACAATTCTTGTACTAGAATTTGATCACACTAAAAATTGTTGCAGGAAATGAATGTTTTGAAAGATTGGCTTACTATGGCATGAGTACAAACTTGGTGAACTATCTCGAAGACCGTTACGGACTTGGAAATGCAGCTGCTGCAAATACTGTCACAACTTGGTCAGGAACATGTTACATCACACCATTGCTTGGAGCCTTTTTAGCTGATGCATACTTGGGAAGATACTGGACAATTGCTAGTTTCTCAAGTATCTATGTCATTGTAAGCTCATTTGAAGATAAGATTTTCTTTTTTGTTGAATGTTTTGATAAAGACTTTTAATCTGCATTCTTTTCAATATCAGTTATATTTAAATGTCCGAGGTTCATACTCAAAAGGATCCATACTTTTGCTTAACAATAAATTTCAATTTCAATTTAGATATTGTTAATTTTGCCTATCTTTACTCCTGTCACAATTTGGCATAATTTTTGAACTAGAAGACAATGTTGGCAACTCTATTCTACTTTGAGAACAGTATTAATCTTAGCACTAGTTTCATTTTGGAATCTTCAGTTTAATTCTAAACATTTACTACATTTCAAATTTTCAAGAAATTTCAACTAAGGTACTTGAACTGTGTTTCAGATCATTACTATCAAGTTAGGACCTTTTATGACTGACACACTTGAGTTCACCTACCTGCATAAGCATTTGTGAGACTGTTCCGGAGCGCTTATGGAAACAACTCATGACCTGTCAATAAGCTGTTTCAGCTTATTTCCATAAGCCCTTCAGGATAGCTTATGAAAAGTAGAAAACACCTTATTGTTTATATAAAATCAATATGATTTTATATTTTTTTTTATAGAAATAGCTTAGGGCCAAAAATGCTAAACTAATATGAGGGAAAGACATGTTAATGGAGTCGTTGTTTGTGTACTTCCCAGGGAATGGCACTTTTAACATTTTCTGCAATTGCACCTGGACTAAAGCCTTCATGTGATTCTAATGTCTGCCATCCGACGTCAGGACAAACTGCAGCCCTTTTTATAGCACTCTACTTGATTGCGCTTGGAACCGGCGGTATCAAACCATGTGTTTCATCTTTTGGTGCTGACCAATTTGATGAAAACGATGAGACTGAGAGGAAAAAGAAAAGCTCCTTTTTCAATTGGTTTTACTTCTCAATTAATATCGGTGCACTCATTGCTTCCTCGGTGTTGGTTTGGATACAGATGAATGTCGGATGGGGATGGGGTTTTGGAGTGCCTGGAGTTGCAATGGTTATCGCCATTATATTTTTCTTCATCGGTAGTAGATGGTATAGACTTCAAATACCTGGTGGAAGTCCTCTTACAAGGATTTGTCAAGTTATTGTTGCAGCATTTAGGAAACTTGGGCAACAAGTTCCAGATGATAAGTCTCTTCTTTATGAGACTACTGATGTAGAATCTAACATCAAAGGGAGCCGGAAACTTGAACACACAAATGAATTGAAGTAAGATATCAAAACCATTTTTATATTTATTTTTATGATGAGGGTTAGTAGTAGAAATGATATCTTCATATTCTGTTATGAACTTCTCATGTATATAGAGATTACGGCATAATATCTTGATAAGATGGAATGGACATTCTATGCAATCCAAACAACTAAACCTAGCATCTTCCTATTCCATCCCTTTTCATAAATTCAAACATAGACTTAGCAGGTAATTCCATATGATTCATGGTTTTTGTTGATAGGGTTGATTTAGGCCCAAAACAAATATTAAGATGGTATCAGATTTTACTCAAAATTTGATTTAGGCCTAAACCAACTATTAAGATGCTATCCGATTCACACTGCAGATGTATGGTCTTTGCTGTGATGGTTTGTGTTGAGAGAGTCCCACAATGGATGAGACATTACCTAAAAATGTGTTTAAAAGAGGGAACCATTTATAACCTTACAATCCGATTCTGTAGAATTGGGTTAGACTCAACCCAAATTTTGAAGGTTTCTTTTTTCTTTTCCTTCTCTTTTTCTACTTGAATCCTTAGTATATCAACAAATTTATAATCAAGACAAAAAACAAAGTTTAGTCCTTCACATCCATTATAAAGAATGTAGACAGACACTAGCATCTCCTTTTCTTATTCTAAACTTCATCATCCATTAACTCTAATGTTTGCTTTACGTTCTTATCTTACCTTATAATAACTAACAAAAAATTCCCAGGTGTTTGGATAAGGCAGCAGTAGAGACAGAATCCGACCGGATAAAAGATGTGCCGAATCCATGGAGGCTCTGTACAGTAACACAAGTAGAGGAACTCAAATCGATCGTTCGTTTACTCCCCATTGTGGCATCAACGATAGGCTTTTCAACAGTATACAGTCAAATGGGAACCATGTTTGTGTTACAAGGCAACACAATGGATCAACACATTGGTCCTAAATTCAAAATTCCATCAGCTTCCCTCTCCCTTTTCGACACTCTAAGTGTCATCTTCTGGGCCCCGGTCTACGACCGTCTCATCGTCCCTTTCGCAAGAAAGTTCACCGGCCATGAACACGGATTCACACAGCTTCAAAGAATCGGAATCGGCCTGGTCATCTCCATCATTTCCATGATCGTGGCAGGGACTCTAGAAGTCATCCGCCTCGACATTGTCCGCAAAAACAACTACTATGATCTCGAAACCATCCCTATGTCGATCTTATGGCAAGTCCCGCAGTATTTCCTCGTAGGTGCCGCGGAAGTTTTCACTAATATCGGTCAGATGGAGTTCTTTTATGGTCAGGCACCTGATGCTATGAGAAGTTTGTGTGCTGCACTTTCACTTAAAAATAATGCATTGGGAAATTATATCAGTACATTGCTTGTTACTATTGTCACAAAAGTTACTACAAGAAATGGAAGTCTTGGTTGGATTCCAGATAATATGAATAGGGGTCACCTTGATTATTTCTACTGGCTTTTGACAATTCTTAGTTTGATCAACTTCATTGTGTATCTATTGATTGCTAAGAGGTATACATACAAAAAAGTGACTCATCTTAGGTGA
Protein sequence

>MS.gene052758.t1

MAAPSPSSPRRYAPSLLLHPSPSALAMQKQSWKNLITLKIVAGNECFERLAYYGMSTNLVNYLEDRYGLGNAAAANTVTTWSGTCYITPLLGAFLADAYLGRYWTIASFSSIYVIGMALLTFSAIAPGLKPSCDSNVCHPTSGQTAALFIALYLIALGTGGIKPCVSSFGADQFDENDETERKKKSSFFNWFYFSINIGALIASSVLVWIQMNVGWGWGFGVPGVAMVIAIIFFFIGSRWYRLQIPGGSPLTRICQVIVAAFRKLGQQVPDDKSLLYETTDVESNIKGSRKLEHTNELKCLDKAAVETESDRIKDVPNPWRLCTVTQVEELKSIVRLLPIVASTIGFSTVYSQMGTMFVLQGNTMDQHIGPKFKIPSASLSLFDTLSVIFWAPVYDRLIVPFARNTLLVTIVTKVTTRNGSLGWIPDNMNRGHLDYFYWLLTILSLINFIVYLLIAKRYTYKKVTHLR