AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene064519


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene064519.t1 MTR_5g078290 97.658 427 10 0 1 427 1 427 0.0 853
MS.gene064519.t1 MTR_5g078290 97.895 380 8 0 1 380 1 380 0.0 760
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene064519.t1 AT1G66330 68.405 326 86 2 104 418 81 400 6.25e-135 394
MS.gene064519.t1 AT1G66330 68.405 326 86 2 104 418 81 400 6.25e-135 394

Find 93 sgRNAs with CRISPR-Local

Find 310 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGAAATTCTGTCCCTAAAA+AGG 0.241678 5.3:-63265810 None:intergenic
AGAACCACAAATTCCTTTCT+TGG 0.277347 5.3:+63268132 MS.gene064519:CDS
GAGAAACTTTGCATCGTTAC+AGG 0.311814 5.3:-63265305 None:intergenic
GATCCCTTATCTCTGAAAAT+AGG 0.313256 5.3:-63268060 None:intergenic
CCGAAACCAGTCATTGAATA+AGG 0.321628 5.3:-63264874 None:intergenic
CTGGAGTGACGGGGCCTTAG+AGG 0.337435 5.3:+63266238 MS.gene064519:CDS
TCAAGGGTTAGACTCGAAAA+TGG 0.338957 5.3:+63264813 MS.gene064519:CDS
GAAGCTAAACTAACCTCTTC+AGG 0.339327 5.3:-63268367 None:intergenic
CCTTATTCAATGACTGGTTT+CGG 0.341454 5.3:+63264874 MS.gene064519:CDS
GAACCACAAATTCCTTTCTT+GGG 0.342712 5.3:+63268133 MS.gene064519:CDS
ATCTTCCATGGCACGTTGCT+TGG 0.348175 5.3:-63267314 None:intergenic
GTCTTGGAGATTAAACTAAC+TGG 0.351920 5.3:-63264915 None:intergenic
ACAGAATTTCTCAAACTTGA+TGG 0.355828 5.3:+63265821 MS.gene064519:CDS
GATCGTATTCGTTCTGTTCG+TGG 0.356798 5.3:+63265259 MS.gene064519:CDS
ATACAGTAGCAATACGATTA+AGG 0.363525 5.3:-63266065 None:intergenic
ATTTAACAGATTTACCTCTA+AGG 0.373384 5.3:-63266252 None:intergenic
AGTATCTATAGGAAGCTTAC+TGG 0.373975 5.3:+63268296 MS.gene064519:intron
GATGCTGCAGCTGCAATGGC+TGG 0.379748 5.3:-63269721 None:intergenic
TGATCTTCTGATGGCACTTA+CGG 0.391058 5.3:+63264695 None:intergenic
ATAGGAAGCTTACTGGAGTA+TGG 0.402823 5.3:+63268303 MS.gene064519:intron
CTCTCAGAAAATAATGTTAG+AGG 0.404947 5.3:+63268084 MS.gene064519:CDS
TTTCAGTTCATATATAGCTT+TGG 0.412176 5.3:-63269743 None:intergenic
ATATCACCTCCAAGGACATA+AGG 0.415173 5.3:-63267339 None:intergenic
ATATCCACTGCAGATCTTGA+AGG 0.418058 5.3:+63266175 MS.gene064519:intron
CCTTACCTGGTACCGACATC+AGG 0.418804 5.3:-63268553 None:intergenic
AAATAGAAGAAGGGGATAGT+TGG 0.418919 5.3:+63269776 MS.gene064519:CDS
GACTGGTTTCGGTTCATCAA+TGG 0.425130 5.3:+63264885 MS.gene064519:CDS
TTTGGATGCTGCAGCTGCAA+TGG 0.432658 5.3:-63269725 None:intergenic
CTCTTGGAAACGCAGGGATG+GGG 0.434985 5.3:+63269259 MS.gene064519:CDS
CCGATGAGCACTGGAGTGAC+GGG 0.435635 5.3:+63266228 MS.gene064519:CDS
AGAACGGATTACTGCTCTTC+AGG 0.442816 5.3:+63268167 MS.gene064519:CDS
TCTGTCTCATGTAAATCAAC+AGG 0.443072 5.3:+63264942 MS.gene064519:CDS
GGATAGTTGGAGGTTTATGA+TGG 0.443543 5.3:+63269789 MS.gene064519:CDS
AACTGTATTCTGTTTATCCT+TGG 0.449791 5.3:-63264789 None:intergenic
ACTCTTGGAAACGCAGGGAT+GGG 0.451755 5.3:+63269258 MS.gene064519:CDS
CGAATCATGCTTGAAAAGAA+TGG 0.454171 5.3:+63268108 MS.gene064519:CDS
CTGCATAGCTCGGGCAAGAA+AGG 0.454178 5.3:+63265999 MS.gene064519:intron
TAGAAGAAGGGGATAGTTGG+AGG 0.461239 5.3:+63269779 MS.gene064519:CDS
GGAAGATGCCCTTATGTCCT+TGG 0.463046 5.3:+63267330 MS.gene064519:CDS
TAAACACAGTGTATCTTTGT+TGG 0.464348 5.3:+63268513 MS.gene064519:CDS
TTTCCAAGAGTCCACATAGA+TGG 0.475502 5.3:-63269246 None:intergenic
GCACCATCTATGTGGACTCT+TGG 0.478002 5.3:+63269243 MS.gene064519:CDS
GATCAACCTTATTCAATGAC+TGG 0.479668 5.3:+63264868 MS.gene064519:CDS
ACATGAGACAGAAGATGTCT+TGG 0.481154 5.3:-63264931 None:intergenic
TATCACCTCCAAGGACATAA+GGG 0.487860 5.3:-63267338 None:intergenic
GACTCTTGGAAACGCAGGGA+TGG 0.489246 5.3:+63269257 MS.gene064519:CDS
GCCGATGAGCACTGGAGTGA+CGG 0.489465 5.3:+63266227 MS.gene064519:CDS
GTTGCTCTATTAGTCAAGAT+AGG 0.494347 5.3:-63264738 None:intergenic
ACGTTGCTTGGCACGGAAGT+CGG 0.495141 5.3:-63267302 None:intergenic
ATCCCCAAGAAAGGAATTTG+TGG 0.496739 5.3:-63268136 None:intergenic
TGCCGTCACATCCCCAAGAA+AGG 0.509048 5.3:-63268145 None:intergenic
AGCAATGGGAAATAGAAGAA+GGG 0.512568 5.3:+63269767 MS.gene064519:CDS
ATTTCTTCAGTGGCATAATG+AGG 0.515220 5.3:+63265759 MS.gene064519:intron
AAGCAATGGGAAATAGAAGA+AGG 0.516781 5.3:+63269766 MS.gene064519:CDS
AACCACAAATTCCTTTCTTG+GGG 0.522590 5.3:+63268134 MS.gene064519:CDS
CCATGGCACGTTGCTTGGCA+CGG 0.523891 5.3:-63267309 None:intergenic
AAAGTGCTGCCGATGAGCAC+TGG 0.524125 5.3:+63266219 MS.gene064519:CDS
TTCCTTTCTTGGGGATGTGA+CGG 0.526745 5.3:+63268143 MS.gene064519:CDS
GTTCCCCTGATGTCGGTACC+AGG 0.542379 5.3:+63268548 MS.gene064519:CDS
CTTCAGTGGCATAATGAGGA+TGG 0.542595 5.3:+63265763 MS.gene064519:intron
GGACATAAGGGCATCTTCCA+TGG 0.546770 5.3:-63267326 None:intergenic
CCCGTCACTCCAGTGCTCAT+CGG 0.553203 5.3:-63266228 None:intergenic
TCTTGGAAACGCAGGGATGG+GGG 0.560998 5.3:+63269260 MS.gene064519:CDS
TCTTATAGACCTTGATGCAA+TGG 0.567724 5.3:+63268486 MS.gene064519:CDS
CCGTGCCAAGCAACGTGCCA+TGG 0.568141 5.3:+63267309 MS.gene064519:CDS
TCTGCACTTTCTGAAGCAGA+TGG 0.572909 5.3:+63268328 MS.gene064519:CDS
TGATTACACTGATCCTGAAG+AGG 0.574801 5.3:+63268354 MS.gene064519:CDS
ACGAGCTTTAGCGAAGGCAC+TGG 0.575429 5.3:+63269215 MS.gene064519:CDS
CTTACCTGGTACCGACATCA+GGG 0.576473 5.3:-63268552 None:intergenic
CTTGTTGTAGAGGCTGGCCG+AGG 0.577303 5.3:+63269690 MS.gene064519:intron
ATGTGGACTCTTGGAAACGC+AGG 0.578590 5.3:+63269252 MS.gene064519:CDS
GTTTACCGTCCATTGCATCA+AGG 0.580602 5.3:-63268495 None:intergenic
GCAATGGGAAATAGAAGAAG+GGG 0.584212 5.3:+63269768 MS.gene064519:CDS
CGATGAGCACTGGAGTGACG+GGG 0.596211 5.3:+63266229 MS.gene064519:CDS
AGTATAAAATATCACCTCCA+AGG 0.600169 5.3:-63267347 None:intergenic
GCTTGGCACGGAAGTCGGCA+AGG 0.602685 5.3:-63267297 None:intergenic
TGGCAGCAGCACCATCTATG+TGG 0.613054 5.3:+63269235 MS.gene064519:CDS
TGTTCTAGTTCCCCTGATGT+CGG 0.616561 5.3:+63268541 MS.gene064519:CDS
TCTTGCTCACCATCATGTCA+TGG 0.617464 5.3:-63267513 None:intergenic
TTGGGGATGTGACGGCAGAA+CGG 0.619552 5.3:+63268151 MS.gene064519:CDS
TGTGGACTCTTGGAAACGCA+GGG 0.628626 5.3:+63269253 MS.gene064519:CDS
GCAACACTTTGTAGATCACA+TGG 0.633717 5.3:+63264756 MS.gene064519:CDS
TTCTAGACGAGCTTTAGCGA+AGG 0.635480 5.3:+63269209 MS.gene064519:intron
AGATGCCCTTATGTCCTTGG+AGG 0.646483 5.3:+63267333 MS.gene064519:CDS
ATAGACCTTGATGCAATGGA+CGG 0.648829 5.3:+63268490 MS.gene064519:CDS
AATGGCTGGATTGCTATCCT+CGG 0.650744 5.3:-63269707 None:intergenic
ACGGCAAACAAAGTTTCAAG+CGG 0.658042 5.3:+63264714 MS.gene064519:CDS
ATGATGTTTCTGATTTGACT+CGG 0.661077 5.3:+63265006 MS.gene064519:CDS
ACGATGCAAAGTTTCTCTCA+CGG 0.666602 5.3:+63265311 MS.gene064519:CDS
CACATGGATCTTCATCACCA+AGG 0.668703 5.3:+63264772 MS.gene064519:CDS
TATGATGGATGAAAGCAGCA+AGG 0.691727 5.3:+63269804 MS.gene064519:CDS
TTACCTGGTACCGACATCAG+GGG 0.705857 5.3:-63268551 None:intergenic
GATACTGAGAAAATCGACCG+TGG 0.757796 5.3:+63266021 MS.gene064519:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAAAAAAA+AGG - chr5.3:63267412-63267431 None:intergenic 0.0%
!! ATAGAACAAATTTATTTATT+TGG - chr5.3:63267463-63267482 None:intergenic 10.0%
!! GTTTAAATAATTAAATACTA+CGG - chr5.3:63267851-63267870 None:intergenic 10.0%
!! TTATTTATAATTCATATGAA+TGG + chr5.3:63267218-63267237 MS.gene064519:intron 10.0%
!!! AATATATTTCTAAAAAGATA+TGG - chr5.3:63265446-63265465 None:intergenic 10.0%
!!! ACATTTAATTATTTAGAATA+TGG - chr5.3:63265669-63265688 None:intergenic 10.0%
!!! TTCTAAAAAAAATGATTTTA+AGG - chr5.3:63269463-63269482 None:intergenic 10.0%
!! AAAAAATAGTTACATTTCAA+TGG - chr5.3:63265911-63265930 None:intergenic 15.0%
!! AGTTTGACATATAATAAAAT+TGG - chr5.3:63265107-63265126 None:intergenic 15.0%
!! TATATCACATTATTTAAACA+AGG - chr5.3:63265859-63265878 None:intergenic 15.0%
!! TTAAAACCTTATAATTGAAA+TGG + chr5.3:63269127-63269146 MS.gene064519:intron 15.0%
!!! AAAAAAATGATTTTAAGGAA+TGG - chr5.3:63269458-63269477 None:intergenic 15.0%
!!! AAAAAATGATTTTAAGGAAT+GGG - chr5.3:63269457-63269476 None:intergenic 15.0%
!!! ATTTTATTATATGTCAAACT+AGG + chr5.3:63265107-63265126 MS.gene064519:intron 15.0%
!!! TCTTTTTAGAAATATATTGT+TGG + chr5.3:63265448-63265467 MS.gene064519:intron 15.0%
!! AAAATTGGCAACTAAAAAAA+TGG - chr5.3:63265092-63265111 None:intergenic 20.0%
!! AGTTTAAAAGTTATGTCAAA+AGG - chr5.3:63267261-63267280 None:intergenic 20.0%
!! ATATTTGTGTAACAATTTGT+TGG + chr5.3:63266360-63266379 MS.gene064519:intron 20.0%
!! CTAAAAAAATGGTAACAAAA+TGG - chr5.3:63265081-63265100 None:intergenic 20.0%
!! CTTTCTATTAATCAAGTTTA+TGG - chr5.3:63267893-63267912 None:intergenic 20.0%
!! GAAAGAATACTATTTATCAA+TGG + chr5.3:63266125-63266144 MS.gene064519:intron 20.0%
!! TAATTCAATATTGCATAACT+TGG - chr5.3:63268767-63268786 None:intergenic 20.0%
!! TTTCAATTACAATTGAAAAC+TGG + chr5.3:63265169-63265188 MS.gene064519:intron 20.0%
!!! AAAAATGATTTTAAGGAATG+GGG - chr5.3:63269456-63269475 None:intergenic 20.0%
!!! ACTAAGATTTTAGTATCTAT+AGG + chr5.3:63268285-63268304 MS.gene064519:intron 20.0%
!!! AGTGAAAATAGATTTTATAC+AGG + chr5.3:63266494-63266513 MS.gene064519:intron 20.0%
!!! CTCTATTTCTAAAAAATATG+TGG + chr5.3:63268827-63268846 MS.gene064519:intron 20.0%
!!! CTTAAAAATTGCTTTTATTG+TGG - chr5.3:63266882-63266901 None:intergenic 20.0%
!!! TACTCAAAAACTATTTTGAA+CGG + chr5.3:63265536-63265555 MS.gene064519:intron 20.0%
!!! TCTAGAATTTTCAATTTTTC+TGG + chr5.3:63266094-63266113 MS.gene064519:intron 20.0%
!!! TTAAAAAAAAGCATTTCTAG+TGG - chr5.3:63269574-63269593 None:intergenic 20.0%
!!! TTAACTAATTATTTCTTCAG+TGG + chr5.3:63265749-63265768 MS.gene064519:intron 20.0%
! AAAAATTGATCAAAAGTGAG+AGG + chr5.3:63266790-63266809 MS.gene064519:intron 25.0%
! AATAGAACCTGAAAAGAAAA+TGG - chr5.3:63268206-63268225 None:intergenic 25.0%
! AATCATACTAACAAACATCA+TGG - chr5.3:63268641-63268660 None:intergenic 25.0%
! AATTTAGCAATCATGATTAG+AGG + chr5.3:63265567-63265586 MS.gene064519:intron 25.0%
! AATTTCCGATACTATATTGT+TGG + chr5.3:63266293-63266312 MS.gene064519:intron 25.0%
! ACAAAAATTAGACTCATTGA+TGG + chr5.3:63266989-63267008 MS.gene064519:intron 25.0%
! ACAGATTAAAAGGATAAACA+AGG + chr5.3:63267014-63267033 MS.gene064519:intron 25.0%
! ACTAACCAACAATATAGTAT+CGG - chr5.3:63266301-63266320 None:intergenic 25.0%
! AGTGTAAAATATGTGAGTAT+AGG + chr5.3:63268908-63268927 MS.gene064519:intron 25.0%
! ATATGAACTGAAAAAGCAAT+GGG + chr5.3:63269753-63269772 MS.gene064519:CDS 25.0%
! ATATGAGATGATAATATGCT+AGG - chr5.3:63269041-63269060 None:intergenic 25.0%
! ATGAATGCATAAATAGTGAT+AGG - chr5.3:63268418-63268437 None:intergenic 25.0%
! ATTTAACAGATTTACCTCTA+AGG - chr5.3:63266255-63266274 None:intergenic 25.0%
! CTCATTATAGAAATCTGTAT+GGG - chr5.3:63267181-63267200 None:intergenic 25.0%
! CTGGAAAAGAATTCTTTAAT+CGG + chr5.3:63265482-63265501 MS.gene064519:intron 25.0%
! GATTGTATAGTGGTTATTAA+AGG - chr5.3:63265513-63265532 None:intergenic 25.0%
! GTTAGCATATAATTAGAATC+AGG - chr5.3:63265349-63265368 None:intergenic 25.0%
! TAAAATACTAATCCCTATTC+AGG - chr5.3:63269003-63269022 None:intergenic 25.0%
! TATATGAACTGAAAAAGCAA+TGG + chr5.3:63269752-63269771 MS.gene064519:CDS 25.0%
! TCATGATATATATGAACGTA+TGG - chr5.3:63268942-63268961 None:intergenic 25.0%
! TCCATTCAAAAAGAAAACTA+TGG - chr5.3:63267707-63267726 None:intergenic 25.0%
! TCTCATTATAGAAATCTGTA+TGG - chr5.3:63267182-63267201 None:intergenic 25.0%
! TGATTAGAGGAGTTATAATA+TGG + chr5.3:63265580-63265599 MS.gene064519:intron 25.0%
! TGTATGGGATAGTAATATAA+AGG - chr5.3:63267166-63267185 None:intergenic 25.0%
! TTAATATTTACTCATTCACC+CGG + chr5.3:63267750-63267769 MS.gene064519:intron 25.0%
! TTGAGTAATTGATTGTATAG+TGG - chr5.3:63265523-63265542 None:intergenic 25.0%
! TTGATACCATCTTAGAATAT+AGG - chr5.3:63266651-63266670 None:intergenic 25.0%
! TTTCAGTTCATATATAGCTT+TGG - chr5.3:63269746-63269765 None:intergenic 25.0%
!! AAACAGAATACAGTTTTCAA+GGG + chr5.3:63264797-63264816 MS.gene064519:CDS 25.0%
!! ACCATAGTTTTCTTTTTGAA+TGG + chr5.3:63267703-63267722 MS.gene064519:intron 25.0%
!! ATGATGTTTGTTAGTATGAT+TGG + chr5.3:63268640-63268659 MS.gene064519:intron 25.0%
!! TAAACAGAATACAGTTTTCA+AGG + chr5.3:63264796-63264815 MS.gene064519:CDS 25.0%
!! TTCTTTTCCATTTTCTTTTC+AGG + chr5.3:63268196-63268215 MS.gene064519:intron 25.0%
!! TTTTACACTTGCTCTTTATT+TGG - chr5.3:63268897-63268916 None:intergenic 25.0%
!!! AACAGAGACAACATTTTTTT+TGG - chr5.3:63265395-63265414 None:intergenic 25.0%
AAAAACCAATTTACAAGGTG+AGG - chr5.3:63266607-63266626 None:intergenic 30.0%
AAAACCAATTTACAAGGTGA+GGG - chr5.3:63266606-63266625 None:intergenic 30.0%
AAATATGAAAAACGCAGACA+AGG - chr5.3:63267992-63268011 None:intergenic 30.0%
AAATGTGTCAACTTTGCTAA+AGG - chr5.3:63269666-63269685 None:intergenic 30.0%
AACAATTATTTCCACACATG+AGG - chr5.3:63265731-63265750 None:intergenic 30.0%
AACTGTATTCTGTTTATCCT+TGG - chr5.3:63264792-63264811 None:intergenic 30.0%
AATGTGTCAACTTTGCTAAA+GGG - chr5.3:63269665-63269684 None:intergenic 30.0%
ACAATATTAGAACTTGGGTT+TGG - chr5.3:63266858-63266877 None:intergenic 30.0%
ACAGAATTTCTCAAACTTGA+TGG + chr5.3:63265821-63265840 MS.gene064519:CDS 30.0%
AGTATAAAATATCACCTCCA+AGG - chr5.3:63267350-63267369 None:intergenic 30.0%
ATACAGTAGCAATACGATTA+AGG - chr5.3:63266068-63266087 None:intergenic 30.0%
ATGTTTCATTCGATGTTTGT+TGG + chr5.3:63267596-63267615 MS.gene064519:intron 30.0%
ATTGTTGGAGATATATGAAC+TGG + chr5.3:63265463-63265482 MS.gene064519:intron 30.0%
CAATATTATATCCTCATGTG+TGG + chr5.3:63265717-63265736 MS.gene064519:intron 30.0%
CCTACAAAAACCAATTTACA+AGG - chr5.3:63266612-63266631 None:intergenic 30.0%
CTCTCAGAAAATAATGTTAG+AGG + chr5.3:63268084-63268103 MS.gene064519:CDS 30.0%
CTGAAAGATCTTAACATCAA+AGG - chr5.3:63268581-63268600 None:intergenic 30.0%
CTTTGATGTTAAGATCTTTC+AGG + chr5.3:63268579-63268598 MS.gene064519:intron 30.0%
GAATAGTACAAACTCATACT+AGG - chr5.3:63268668-63268687 None:intergenic 30.0%
GAATCATTTGGATGTGATAT+GGG + chr5.3:63266764-63266783 MS.gene064519:intron 30.0%
GTCGATCATAAAACTTTATC+AGG - chr5.3:63268392-63268411 None:intergenic 30.0%
GTGGTACAATATTAGAACTT+GGG - chr5.3:63266863-63266882 None:intergenic 30.0%
TAAACACAGTGTATCTTTGT+TGG + chr5.3:63268513-63268532 MS.gene064519:CDS 30.0%
TAACAAACATCATGGCATAT+AGG - chr5.3:63268633-63268652 None:intergenic 30.0%
TAACATTCATAGAGATCACT+TGG + chr5.3:63268860-63268879 MS.gene064519:intron 30.0%
TAATATTTACTCATTCACCC+GGG + chr5.3:63267751-63267770 MS.gene064519:intron 30.0%
TATGCTAACAGTATTGTTTC+TGG + chr5.3:63265360-63265379 MS.gene064519:intron 30.0%
TCCTGATTCATACTGAATTA+GGG - chr5.3:63268246-63268265 None:intergenic 30.0%
TGAATCATTTGGATGTGATA+TGG + chr5.3:63266763-63266782 MS.gene064519:intron 30.0%
TGTACATTATCAGTGTAAAC+AGG - chr5.3:63266953-63266972 None:intergenic 30.0%
TGTGGTACAATATTAGAACT+TGG - chr5.3:63266864-63266883 None:intergenic 30.0%
TTCCTGATTCATACTGAATT+AGG - chr5.3:63268247-63268266 None:intergenic 30.0%
TTTAGCAAAGTTGACACATT+TGG + chr5.3:63269665-63269684 MS.gene064519:intron 30.0%
! AAATGTAAGTTGACCATGTA+AGG - chr5.3:63265968-63265987 None:intergenic 30.0%
! AATGTAAGTTGACCATGTAA+GGG - chr5.3:63265967-63265986 None:intergenic 30.0%
! AGTCCTATTTTCAGAGATAA+GGG + chr5.3:63268057-63268076 MS.gene064519:intron 30.0%
! ATATTGCATAACTTGGTTTG+AGG - chr5.3:63268760-63268779 None:intergenic 30.0%
! ATGATGTTTCTGATTTGACT+CGG + chr5.3:63265006-63265025 MS.gene064519:CDS 30.0%
! ATTGATGGACACAGATTAAA+AGG + chr5.3:63267004-63267023 MS.gene064519:intron 30.0%
! ATTTTCGTCATTCTTTGACA+AGG + chr5.3:63268699-63268718 MS.gene064519:intron 30.0%
! CTCATAGTGTATTGATAAGA+AGG + chr5.3:63267625-63267644 MS.gene064519:intron 30.0%
! GACATAACTTTTAAACTGTC+AGG + chr5.3:63267264-63267283 MS.gene064519:intron 30.0%
! GTCTAATGTTTGAAGTGATA+TGG + chr5.3:63266550-63266569 MS.gene064519:intron 30.0%
! TACTTAAAGAGAGAGTACAA+AGG - chr5.3:63269092-63269111 None:intergenic 30.0%
! TATAATTAGAATCAGGTTGC+TGG - chr5.3:63265342-63265361 None:intergenic 30.0%
! TATTGCATAACTTGGTTTGA+GGG - chr5.3:63268759-63268778 None:intergenic 30.0%
! TGTCTTTCTTCTTATCGTTT+TGG + chr5.3:63265133-63265152 MS.gene064519:intron 30.0%
!! AAAAGGAGTCTTGTATTTTC+TGG - chr5.3:63267244-63267263 None:intergenic 30.0%
!! AATGAGAGATAAGAAGTGTT+TGG + chr5.3:63267195-63267214 MS.gene064519:intron 30.0%
!! ACGATCATTTTTCTCATCTT+CGG - chr5.3:63265245-63265264 None:intergenic 30.0%
!! CTGAAAAGGTGTTTATAAGA+GGG + chr5.3:63266574-63266593 MS.gene064519:intron 30.0%
!!! AGAGACAACATTTTTTTTGG+TGG - chr5.3:63265392-63265411 None:intergenic 30.0%
!!! CCTTGTAAATTGGTTTTTGT+AGG + chr5.3:63266609-63266628 MS.gene064519:intron 30.0%
AAATAGAAGAAGGGGATAGT+TGG + chr5.3:63269776-63269795 MS.gene064519:CDS 35.0%
AACCACAAATTCCTTTCTTG+GGG + chr5.3:63268134-63268153 MS.gene064519:CDS 35.0%
AACCTACAAAACAGGTTTGT+AGG - chr5.3:63266826-63266845 None:intergenic 35.0%
AAGCAATGGGAAATAGAAGA+AGG + chr5.3:63269766-63269785 MS.gene064519:CDS 35.0%
ACATCCAAATGATTCACTGT+GGG - chr5.3:63266759-63266778 None:intergenic 35.0%
ACCTACAAAACAGGTTTGTA+GGG - chr5.3:63266825-63266844 None:intergenic 35.0%
ACTGTCACATTAATCTGCAA+TGG - chr5.3:63266477-63266496 None:intergenic 35.0%
AGAACCACAAATTCCTTTCT+TGG + chr5.3:63268132-63268151 MS.gene064519:CDS 35.0%
AGCAACTCTGTAATTAAGTG+TGG - chr5.3:63267123-63267142 None:intergenic 35.0%
AGCAATGGGAAATAGAAGAA+GGG + chr5.3:63269767-63269786 MS.gene064519:CDS 35.0%
AGTATCTATAGGAAGCTTAC+TGG + chr5.3:63268296-63268315 MS.gene064519:intron 35.0%
ATATCCCTCACCTTGTAAAT+TGG + chr5.3:63266599-63266618 MS.gene064519:intron 35.0%
ATTTCTTCAGTGGCATAATG+AGG + chr5.3:63265759-63265778 MS.gene064519:intron 35.0%
CAAAAACATCCATGACATGA+TGG + chr5.3:63267504-63267523 MS.gene064519:CDS 35.0%
CACTGTAGTTGTCTAATACT+TGG + chr5.3:63266719-63266738 MS.gene064519:intron 35.0%
CATTGTCAGAAAAGCAAACT+CGG - chr5.3:63268028-63268047 None:intergenic 35.0%
CCTGATTCATACTGAATTAG+GGG - chr5.3:63268245-63268264 None:intergenic 35.0%
CGAATCATGCTTGAAAAGAA+TGG + chr5.3:63268108-63268127 MS.gene064519:CDS 35.0%
CGCTAGCCATTTCAATTATA+AGG - chr5.3:63269136-63269155 None:intergenic 35.0%
GAACCACAAATTCCTTTCTT+GGG + chr5.3:63268133-63268152 MS.gene064519:CDS 35.0%
GAGAAATTCTGTCCCTAAAA+AGG - chr5.3:63265813-63265832 None:intergenic 35.0%
GATCAACCTTATTCAATGAC+TGG + chr5.3:63264868-63264887 MS.gene064519:CDS 35.0%
GTCAAAACATTCTCAATTGC+AGG + chr5.3:63268721-63268740 MS.gene064519:intron 35.0%
GTCTTGGAGATTAAACTAAC+TGG - chr5.3:63264918-63264937 None:intergenic 35.0%
GTTGCTCTATTAGTCAAGAT+AGG - chr5.3:63264741-63264760 None:intergenic 35.0%
TAAATACTACGGTCCAGTTT+GGG - chr5.3:63267840-63267859 None:intergenic 35.0%
TCTGTCTCATGTAAATCAAC+AGG + chr5.3:63264942-63264961 MS.gene064519:CDS 35.0%
TCTTATAGACCTTGATGCAA+TGG + chr5.3:63268486-63268505 MS.gene064519:CDS 35.0%
TGAGATGATAATATGCTAGG+TGG - chr5.3:63269038-63269057 None:intergenic 35.0%
TGGACAAGGAAAATAAGCAA+AGG - chr5.3:63269178-63269197 None:intergenic 35.0%
TTAAATACTACGGTCCAGTT+TGG - chr5.3:63267841-63267860 None:intergenic 35.0%
! AAAGGATAAACAAGGTGTTC+TGG + chr5.3:63267022-63267041 MS.gene064519:intron 35.0%
! ACTCGAGCTGACTTAAATAT+TGG + chr5.3:63265609-63265628 MS.gene064519:intron 35.0%
! ATGTAAGTTGACCATGTAAG+GGG - chr5.3:63265966-63265985 None:intergenic 35.0%
! CAGTCCTATTTTCAGAGATA+AGG + chr5.3:63268056-63268075 MS.gene064519:intron 35.0%
! CCTCTTATAAACACCTTTTC+AGG - chr5.3:63266576-63266595 None:intergenic 35.0%
! GATCCCTTATCTCTGAAAAT+AGG - chr5.3:63268063-63268082 None:intergenic 35.0%
! GCTGAACCTATATTCTAAGA+TGG + chr5.3:63266642-63266661 MS.gene064519:intron 35.0%
!! ACATTTGGTTCTTGTTGTAG+AGG + chr5.3:63269680-63269699 MS.gene064519:intron 35.0%
!! CCTGAAAAGGTGTTTATAAG+AGG + chr5.3:63266573-63266592 MS.gene064519:intron 35.0%
!! CCTTATTCAATGACTGGTTT+CGG + chr5.3:63264874-63264893 MS.gene064519:CDS 35.0%
!! GGTTTTTGTAGGTTTGAGTT+AGG + chr5.3:63266620-63266639 MS.gene064519:intron 35.0%
!! TAGCTTTTTCTTTGACACCA+CGG - chr5.3:63266041-63266060 None:intergenic 35.0%
!! TTGCTTTTCTGACAATGTTG+TGG + chr5.3:63268031-63268050 MS.gene064519:intron 35.0%
AAATACTACGGTCCAGTTTG+GGG - chr5.3:63267839-63267858 None:intergenic 40.0%
AACATCAAAGGAACCTTACC+TGG - chr5.3:63268569-63268588 None:intergenic 40.0%
AAGGTTCCTAAGTGAACACA+TGG - chr5.3:63267394-63267413 None:intergenic 40.0%
ACATGAGACAGAAGATGTCT+TGG - chr5.3:63264934-63264953 None:intergenic 40.0%
ACGATGCAAAGTTTCTCTCA+CGG + chr5.3:63265311-63265330 MS.gene064519:CDS 40.0%
ACGGCAAACAAAGTTTCAAG+CGG + chr5.3:63264714-63264733 MS.gene064519:CDS 40.0%
AGCCAATTGTGTCTACATCT+CGG - chr5.3:63267937-63267956 None:intergenic 40.0%
ATAGACCTTGATGCAATGGA+CGG + chr5.3:63268490-63268509 MS.gene064519:CDS 40.0%
ATAGGAAGCTTACTGGAGTA+TGG + chr5.3:63268303-63268322 MS.gene064519:intron 40.0%
ATATCACCTCCAAGGACATA+AGG - chr5.3:63267342-63267361 None:intergenic 40.0%
ATATCCACTGCAGATCTTGA+AGG + chr5.3:63266175-63266194 MS.gene064519:intron 40.0%
ATATCCTTCAAGATCTGCAG+TGG - chr5.3:63266182-63266201 None:intergenic 40.0%
ATCATGGCATATAGGTGCAT+TGG - chr5.3:63268625-63268644 None:intergenic 40.0%
ATCCCCAAGAAAGGAATTTG+TGG - chr5.3:63268139-63268158 None:intergenic 40.0%
ATGTCTCCTGTACATGTGAA+AGG - chr5.3:63265221-63265240 None:intergenic 40.0%
CACATCCAAATGATTCACTG+TGG - chr5.3:63266760-63266779 None:intergenic 40.0%
CCAACTCAAACCTACAAAAC+AGG - chr5.3:63266834-63266853 None:intergenic 40.0%
CCCCTAATTCAGTATGAATC+AGG + chr5.3:63268242-63268261 MS.gene064519:intron 40.0%
CCGAAACCAGTCATTGAATA+AGG - chr5.3:63264877-63264896 None:intergenic 40.0%
CGTCTAGAAGTTTACATGCA+TGG - chr5.3:63269198-63269217 None:intergenic 40.0%
GAAGCTAAACTAACCTCTTC+AGG - chr5.3:63268370-63268389 None:intergenic 40.0%
GAAGTTTACATGCATGGACA+AGG - chr5.3:63269192-63269211 None:intergenic 40.0%
GAGAAACTTTGCATCGTTAC+AGG - chr5.3:63265308-63265327 None:intergenic 40.0%
GCAACACTTTGTAGATCACA+TGG + chr5.3:63264756-63264775 MS.gene064519:CDS 40.0%
GCAATGGGAAATAGAAGAAG+GGG + chr5.3:63269768-63269787 MS.gene064519:CDS 40.0%
GGATAGTTGGAGGTTTATGA+TGG + chr5.3:63269789-63269808 MS.gene064519:CDS 40.0%
GTCACATTAATCTGCAATGG+AGG - chr5.3:63266474-63266493 None:intergenic 40.0%
TACACTACATTCCCCTTACA+TGG + chr5.3:63265952-63265971 MS.gene064519:intron 40.0%
TACTTCGCATGTGTTCACTT+AGG + chr5.3:63267366-63267385 MS.gene064519:intron 40.0%
TAGGAACCATGTGTTCACTT+AGG + chr5.3:63267385-63267404 MS.gene064519:intron 40.0%
TATCACCTCCAAGGACATAA+GGG - chr5.3:63267341-63267360 None:intergenic 40.0%
TCAAGGGTTAGACTCGAAAA+TGG + chr5.3:63264813-63264832 MS.gene064519:CDS 40.0%
TCCCTAAAAAGGCAACATCT+TGG - chr5.3:63265802-63265821 None:intergenic 40.0%
TGAAAAACGCAGACAAGGAA+AGG - chr5.3:63267987-63268006 None:intergenic 40.0%
TGAAGTGATATGGCCTGAAA+AGG + chr5.3:63266560-63266579 MS.gene064519:intron 40.0%
TGATTACACTGATCCTGAAG+AGG + chr5.3:63268354-63268373 MS.gene064519:CDS 40.0%
TGCAATGGAGGAGAAAAACT+AGG - chr5.3:63266462-63266481 None:intergenic 40.0%
TGTCTCCTGTACATGTGAAA+GGG - chr5.3:63265220-63265239 None:intergenic 40.0%
TTCCGAGATGTAGACACAAT+TGG + chr5.3:63267932-63267951 MS.gene064519:intron 40.0%
TTTCCAAGAGTCCACATAGA+TGG - chr5.3:63269249-63269268 None:intergenic 40.0%
! ACACTTGCTCTTTATTTGGC+AGG - chr5.3:63268893-63268912 None:intergenic 40.0%
! ACCCTACAAACCTGTTTTGT+AGG + chr5.3:63266821-63266840 MS.gene064519:intron 40.0%
! CCTGTTTTGTAGGTTTGAGT+TGG + chr5.3:63266831-63266850 MS.gene064519:intron 40.0%
! GCCAAGATGTTGCCTTTTTA+GGG + chr5.3:63265798-63265817 MS.gene064519:CDS 40.0%
!! TATGATGGATGAAAGCAGCA+AGG + chr5.3:63269804-63269823 MS.gene064519:CDS 40.0%
AATACTACGGTCCAGTTTGG+GGG - chr5.3:63267838-63267857 None:intergenic 45.0%
AATGGCTGGATTGCTATCCT+CGG - chr5.3:63269710-63269729 None:intergenic 45.0%
AGAGACCCTTTCACATGTAC+AGG + chr5.3:63265212-63265231 MS.gene064519:intron 45.0%
CACATGGATCTTCATCACCA+AGG + chr5.3:63264772-63264791 MS.gene064519:CDS 45.0%
CCAGGGGTAATCTTGTAAAC+TGG + chr5.3:63267680-63267699 MS.gene064519:intron 45.0%
CCAGTTTACAAGATTACCCC+TGG - chr5.3:63267683-63267702 None:intergenic 45.0%
CTACATCTCGGAATTCAGAG+CGG - chr5.3:63267925-63267944 None:intergenic 45.0%
CTCTACTATGCTGCATAGCT+CGG + chr5.3:63265989-63266008 MS.gene064519:intron 45.0%
CTTCAGTGGCATAATGAGGA+TGG + chr5.3:63265763-63265782 MS.gene064519:intron 45.0%
GAGGTCTTGAATTCAAACCC+GGG - chr5.3:63267771-63267790 None:intergenic 45.0%
GAGTCCCACAGTGAATCATT+TGG + chr5.3:63266752-63266771 MS.gene064519:intron 45.0%
GATACTGAGAAAATCGACCG+TGG + chr5.3:63266021-63266040 MS.gene064519:CDS 45.0%
GATCGTATTCGTTCTGTTCG+TGG + chr5.3:63265259-63265278 MS.gene064519:CDS 45.0%
GGAGGTCTTGAATTCAAACC+CGG - chr5.3:63267772-63267791 None:intergenic 45.0%
GTGTGGCATGACATCTTGTT+GGG + chr5.3:63267077-63267096 MS.gene064519:intron 45.0%
GTTTACCGTCCATTGCATCA+AGG - chr5.3:63268498-63268517 None:intergenic 45.0%
TAGAAGAAGGGGATAGTTGG+AGG + chr5.3:63269779-63269798 MS.gene064519:CDS 45.0%
TCTACTATGCTGCATAGCTC+GGG + chr5.3:63265990-63266009 MS.gene064519:intron 45.0%
TCTTGCTCACCATCATGTCA+TGG - chr5.3:63267516-63267535 None:intergenic 45.0%
TTCCTTTCTTGGGGATGTGA+CGG + chr5.3:63268143-63268162 MS.gene064519:CDS 45.0%
! AGGTGTTCTGGTAATGAGCA+TGG + chr5.3:63267034-63267053 MS.gene064519:intron 45.0%
! ATCCGTGAGCCACTCATTTT+CGG + chr5.3:63266683-63266702 MS.gene064519:intron 45.0%
! ATCGGCAGCACTTTTCAATC+TGG - chr5.3:63266213-63266232 None:intergenic 45.0%
! CGCCAAGATGTTGCCTTTTT+AGG + chr5.3:63265797-63265816 MS.gene064519:CDS 45.0%
! GGTGTTCTGGTAATGAGCAT+GGG + chr5.3:63267035-63267054 MS.gene064519:intron 45.0%
! GTATTGATAAGAAGGCTGCG+TGG + chr5.3:63267633-63267652 MS.gene064519:intron 45.0%
! TTCTAGACGAGCTTTAGCGA+AGG + chr5.3:63269209-63269228 MS.gene064519:intron 45.0%
! TTCTGGTAATGAGCATGGGT+TGG + chr5.3:63267039-63267058 MS.gene064519:intron 45.0%
! TTGGTTCTTGTTGTAGAGGC+TGG + chr5.3:63269684-63269703 MS.gene064519:intron 45.0%
!! AGAACGGATTACTGCTCTTC+AGG + chr5.3:63268167-63268186 MS.gene064519:CDS 45.0%
!! GACTGGTTTCGGTTCATCAA+TGG + chr5.3:63264885-63264904 MS.gene064519:CDS 45.0%
!! TCTGCACTTTCTGAAGCAGA+TGG + chr5.3:63268328-63268347 MS.gene064519:CDS 45.0%
!! TGTTCTAGTTCCCCTGATGT+CGG + chr5.3:63268541-63268560 MS.gene064519:CDS 45.0%
ACTCTTGGAAACGCAGGGAT+GGG + chr5.3:63269258-63269277 MS.gene064519:CDS 50.0%
AGATGCCCTTATGTCCTTGG+AGG + chr5.3:63267333-63267352 MS.gene064519:CDS 50.0%
ATACTACGGTCCAGTTTGGG+GGG - chr5.3:63267837-63267856 None:intergenic 50.0%
ATCTTCCATGGCACGTTGCT+TGG - chr5.3:63267317-63267336 None:intergenic 50.0%
ATGTGGACTCTTGGAAACGC+AGG + chr5.3:63269252-63269271 MS.gene064519:CDS 50.0%
ATTACCCCTGGACCATACCA+CGG - chr5.3:63267671-63267690 None:intergenic 50.0%
CCTCCAACTCCTTTAACCCT+CGG + chr5.3:63267787-63267806 MS.gene064519:intron 50.0%
GCACCATCTATGTGGACTCT+TGG + chr5.3:63269243-63269262 MS.gene064519:CDS 50.0%
GGAAGATGCCCTTATGTCCT+TGG + chr5.3:63267330-63267349 MS.gene064519:CDS 50.0%
GGTGTGGCATGACATCTTGT+TGG + chr5.3:63267076-63267095 MS.gene064519:intron 50.0%
GTCCGAAAATGAGTGGCTCA+CGG - chr5.3:63266688-63266707 None:intergenic 50.0%
GTGGCTCACGGATCTTTGAT+AGG - chr5.3:63266676-63266695 None:intergenic 50.0%
TGATAAGAAGGCTGCGTGGA+GGG + chr5.3:63267637-63267656 MS.gene064519:intron 50.0%
TGGTTTGAGCCGAGGGTTAA+AGG - chr5.3:63267799-63267818 None:intergenic 50.0%
TGTGGACTCTTGGAAACGCA+GGG + chr5.3:63269253-63269272 MS.gene064519:CDS 50.0%
TTGATAAGAAGGCTGCGTGG+AGG + chr5.3:63267636-63267655 MS.gene064519:intron 50.0%
TTTGGATGCTGCAGCTGCAA+TGG - chr5.3:63269728-63269747 None:intergenic 50.0%
! CACTCATTTTCGGACCACTC+GGG + chr5.3:63266693-63266712 MS.gene064519:intron 50.0%
! CCACTCATTTTCGGACCACT+CGG + chr5.3:63266692-63266711 MS.gene064519:intron 50.0%
!! AACTCAACTGGTTTGAGCCG+AGG - chr5.3:63267807-63267826 None:intergenic 50.0%
!! ACTCAACTGGTTTGAGCCGA+GGG - chr5.3:63267806-63267825 None:intergenic 50.0%
!! CTTACCTGGTACCGACATCA+GGG - chr5.3:63268555-63268574 None:intergenic 50.0%
!! GGACATAAGGGCATCTTCCA+TGG - chr5.3:63267329-63267348 None:intergenic 50.0%
!! GGGTTGGTGTTGTCACACAT+GGG + chr5.3:63267055-63267074 MS.gene064519:intron 50.0%
!! TGGGTTGGTGTTGTCACACA+TGG + chr5.3:63267054-63267073 MS.gene064519:intron 50.0%
!! TTACCTGGTACCGACATCAG+GGG - chr5.3:63268554-63268573 None:intergenic 50.0%
ACGTTGCTTGGCACGGAAGT+CGG - chr5.3:63267305-63267324 None:intergenic 55.0%
CAACTACAGTGTGACCCGAG+TGG - chr5.3:63266710-63266729 None:intergenic 55.0%
CCGAGGGTTAAAGGAGTTGG+AGG - chr5.3:63267790-63267809 None:intergenic 55.0%
CCGAGTGGTCCGAAAATGAG+TGG - chr5.3:63266695-63266714 None:intergenic 55.0%
CCTGATGTCGGTACCAGGTA+AGG + chr5.3:63268553-63268572 MS.gene064519:intron 55.0%
CTCTTGGAAACGCAGGGATG+GGG + chr5.3:63269259-63269278 MS.gene064519:CDS 55.0%
CTGCATAGCTCGGGCAAGAA+AGG + chr5.3:63265999-63266018 MS.gene064519:intron 55.0%
GACTCTTGGAAACGCAGGGA+TGG + chr5.3:63269257-63269276 MS.gene064519:CDS 55.0%
GAGCCGAGGGTTAAAGGAGT+TGG - chr5.3:63267793-63267812 None:intergenic 55.0%
TACTACGGTCCAGTTTGGGG+GGG - chr5.3:63267836-63267855 None:intergenic 55.0%
TCTTGGAAACGCAGGGATGG+GGG + chr5.3:63269260-63269279 MS.gene064519:CDS 55.0%
TGCCGTCACATCCCCAAGAA+AGG - chr5.3:63268148-63268167 None:intergenic 55.0%
TGGCAGCAGCACCATCTATG+TGG + chr5.3:63269235-63269254 MS.gene064519:CDS 55.0%
TTACCCCTGGACCATACCAC+GGG - chr5.3:63267670-63267689 None:intergenic 55.0%
TTGGGGATGTGACGGCAGAA+CGG + chr5.3:63268151-63268170 MS.gene064519:CDS 55.0%
! ACGAGCTTTAGCGAAGGCAC+TGG + chr5.3:63269215-63269234 MS.gene064519:CDS 55.0%
! GGTGTTGTCACACATGGGTG+TGG + chr5.3:63267060-63267079 MS.gene064519:intron 55.0%
!! AAAGTGCTGCCGATGAGCAC+TGG + chr5.3:63266219-63266238 MS.gene064519:CDS 55.0%
!! CCTTACCTGGTACCGACATC+AGG - chr5.3:63268556-63268575 None:intergenic 55.0%
CCATGGCACGTTGCTTGGCA+CGG - chr5.3:63267312-63267331 None:intergenic 60.0%
CCCGTCACTCCAGTGCTCAT+CGG - chr5.3:63266231-63266250 None:intergenic 60.0%
GATGCTGCAGCTGCAATGGC+TGG - chr5.3:63269724-63269743 None:intergenic 60.0%
GGGGGGTTGGGTAACTCAAC+TGG - chr5.3:63267819-63267838 None:intergenic 60.0%
GTTACCCAACCCCCCCAAAC+TGG + chr5.3:63267824-63267843 MS.gene064519:intron 60.0%
GTTCCCCTGATGTCGGTACC+AGG + chr5.3:63268548-63268567 MS.gene064519:CDS 60.0%
TACCCCTGGACCATACCACG+GGG - chr5.3:63267669-63267688 None:intergenic 60.0%
! CTTGTTGTAGAGGCTGGCCG+AGG + chr5.3:63269690-63269709 MS.gene064519:intron 60.0%
!! CCGATGAGCACTGGAGTGAC+GGG + chr5.3:63266228-63266247 MS.gene064519:CDS 60.0%
!! CGATGAGCACTGGAGTGACG+GGG + chr5.3:63266229-63266248 MS.gene064519:CDS 60.0%
!! GCCGATGAGCACTGGAGTGA+CGG + chr5.3:63266227-63266246 MS.gene064519:CDS 60.0%
AAGCCCCCGTGGTATGGTCC+AGG + chr5.3:63267662-63267681 MS.gene064519:intron 65.0%
ACCCCTGGACCATACCACGG+GGG - chr5.3:63267668-63267687 None:intergenic 65.0%
ACGGTCCAGTTTGGGGGGGT+TGG - chr5.3:63267832-63267851 None:intergenic 65.0%
AGCCCCCGTGGTATGGTCCA+GGG + chr5.3:63267663-63267682 MS.gene064519:intron 65.0%
AGGGTGAAGCCCCCGTGGTA+TGG + chr5.3:63267656-63267675 MS.gene064519:intron 65.0%
CCGTGCCAAGCAACGTGCCA+TGG + chr5.3:63267309-63267328 MS.gene064519:CDS 65.0%
CGGTCCAGTTTGGGGGGGTT+GGG - chr5.3:63267831-63267850 None:intergenic 65.0%
GCTTGGCACGGAAGTCGGCA+AGG - chr5.3:63267300-63267319 None:intergenic 65.0%
! CTGGAGTGACGGGGCCTTAG+AGG + chr5.3:63266238-63266257 MS.gene064519:CDS 65.0%
!! CGCAGGGATGGGGGCATTAC+AGG + chr5.3:63269269-63269288 MS.gene064519:CDS 65.0%
GCCCCCGTGGTATGGTCCAG+GGG + chr5.3:63267664-63267683 MS.gene064519:intron 70.0%
CGTGGAGGGTGAAGCCCCCG+TGG + chr5.3:63267651-63267670 MS.gene064519:intron 75.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 63264705 63269843 63264705 ID=MS.gene064519
chr5.3 mRNA 63264705 63269843 63264705 ID=MS.gene064519.t1;Parent=MS.gene064519
chr5.3 exon 63264705 63265027 63264705 ID=MS.gene064519.t1.exon1;Parent=MS.gene064519.t1
chr5.3 CDS 63264705 63265027 63264705 ID=cds.MS.gene064519.t1;Parent=MS.gene064519.t1
chr5.3 exon 63265234 63265332 63265234 ID=MS.gene064519.t1.exon2;Parent=MS.gene064519.t1
chr5.3 CDS 63265234 63265332 63265234 ID=cds.MS.gene064519.t1;Parent=MS.gene064519.t1
chr5.3 exon 63265769 63265842 63265769 ID=MS.gene064519.t1.exon3;Parent=MS.gene064519.t1
chr5.3 CDS 63265769 63265842 63265769 ID=cds.MS.gene064519.t1;Parent=MS.gene064519.t1
chr5.3 exon 63266007 63266083 63266007 ID=MS.gene064519.t1.exon4;Parent=MS.gene064519.t1
chr5.3 CDS 63266007 63266083 63266007 ID=cds.MS.gene064519.t1;Parent=MS.gene064519.t1
chr5.3 exon 63266188 63266259 63266188 ID=MS.gene064519.t1.exon5;Parent=MS.gene064519.t1
chr5.3 CDS 63266188 63266259 63266188 ID=cds.MS.gene064519.t1;Parent=MS.gene064519.t1
chr5.3 exon 63267286 63267354 63267286 ID=MS.gene064519.t1.exon6;Parent=MS.gene064519.t1
chr5.3 CDS 63267286 63267354 63267286 ID=cds.MS.gene064519.t1;Parent=MS.gene064519.t1
chr5.3 exon 63267499 63267545 63267499 ID=MS.gene064519.t1.exon7;Parent=MS.gene064519.t1
chr5.3 CDS 63267499 63267545 63267499 ID=cds.MS.gene064519.t1;Parent=MS.gene064519.t1
chr5.3 exon 63268059 63268188 63268059 ID=MS.gene064519.t1.exon8;Parent=MS.gene064519.t1
chr5.3 CDS 63268059 63268188 63268059 ID=cds.MS.gene064519.t1;Parent=MS.gene064519.t1
chr5.3 exon 63268307 63268375 63268307 ID=MS.gene064519.t1.exon9;Parent=MS.gene064519.t1
chr5.3 CDS 63268307 63268375 63268307 ID=cds.MS.gene064519.t1;Parent=MS.gene064519.t1
chr5.3 exon 63268466 63268569 63268466 ID=MS.gene064519.t1.exon10;Parent=MS.gene064519.t1
chr5.3 CDS 63268466 63268569 63268466 ID=cds.MS.gene064519.t1;Parent=MS.gene064519.t1
chr5.3 exon 63269215 63269290 63269215 ID=MS.gene064519.t1.exon11;Parent=MS.gene064519.t1
chr5.3 CDS 63269215 63269290 63269215 ID=cds.MS.gene064519.t1;Parent=MS.gene064519.t1
chr5.3 exon 63269700 63269843 63269700 ID=MS.gene064519.t1.exon12;Parent=MS.gene064519.t1
chr5.3 CDS 63269700 63269843 63269700 ID=cds.MS.gene064519.t1;Parent=MS.gene064519.t1
Gene Sequence

>MS.gene064519

ATGGCACTTACGGCAAACAAAGTTTCAAGCGGTCCTATCTTGACTAATAGAGCAACACTTTGTAGATCACATGGATCTTCATCACCAAGGATAAACAGAATACAGTTTTCAAGGGTTAGACTCGAAAATGGACATTTGAACAACGATTCTGTTCTCAATGAGAGATCAACCTTATTCAATGACTGGTTTCGGTTCATCAATGGAAGAAATCCAGTTAGTTTAATCTCCAAGACATCTTCTGTCTCATGTAAATCAACAGGAGCAAATAATACTGAAGAAAAAGAATGTGTTACAACTTATGATGATGTTTCTGATTTGACTCGGTAAAAAACATAAAATATCGATGATAATACACGTGCAATACAAAGTTCATCCATTTTGTTACCATTTTTTTAGTTGCCAATTTTATTATATGTCAAACTAGGATGTGTCTTTCTTCTTATCGTTTTGGCGATGACATGTAATTTCAATTACAATTGAAAACTGGAAGATACAAATTTACTTATTAGAGACCCTTTCACATGTACAGGAGACATGCCGAAGATGAGAAAAATGATCGTATTCGTTCTGTTCGTGGCTTGTCTGAAGCTTATAGATTTGCCTGTAACGATGCAAAGTTTCTCTCACGGTACTTCCAGCAACCTGATTCTAATTATATGCTAACAGTATTGTTTCTGGTTGAGTCCACCAAAAAAAATGTTGTCTCTGTTGAAGTTTACTTTCACTACTGTTCATCTGCCATATCTTTTTAGAAATATATTGTTGGAGATATATGAACTGGAAAAGAATTCTTTAATCGGAAAATCCTTTAATAACCACTATACAATCAATTACTCAAAAACTATTTTGAACGGAGCAAGATAATTTAGCAATCATGATTAGAGGAGTTATAATATGGAAAACGACTCGAGCTGACTTAAATATTGGTTCTCAACACATTTTTTAGTAATTTTATGCAATGCCATATTCTAAATAATTAAATGTCTTTGATTTAAGAAATAACAGTAAGAAACAATATTATATCCTCATGTGTGGAAATAATTGTTAACTAATTATTTCTTCAGTGGCATAATGAGGATGGATGAGCGTGCGCGCCAAGATGTTGCCTTTTTAGGGACAGAATTTCTCAAACTTGATGGTTAGCTCATATACCTTGTTTAAATAATGTGATATATTACATTAACATTACACAACTAAATTCATCCATTGAAATGTAACTATTTTTTTTAGTATTAAATTTTTAAATATACACTACATTCCCCTTACATGGTCAACTTACATTTTCTCTACTATGCTGCATAGCTCGGGCAAGAAAGGATACTGAGAAAATCGACCGTGGTGTCAAAGAAAAAGCTAAGCGCCTTAATCGTATTGCTACTGTATGTATCGTCTAGAATTTTCAATTTTTCTGGTTGAAGATGAAAGAATACTATTTATCAATGGTATAATGTTCTTCTTTGTTTATTTTTTATATCCACTGCAGATCTTGAAGGATATCGCTCAGACCAGATTGAAAAGTGCTGCCGATGAGCACTGGAGTGACGGGGCCTTAGAGGTAAATCTGTTAAATCTCTAATCTATCAATTCTAATTTCCGATACTATATTGTTGGTTAGTTTGAAGTGTAATCAGTACTGATATAATTTGCATTATGTGATATTTGTGTAACAATTTGTTGGTTTTTGTGTATTTTATACTGTTTAACTTTTTTAAAAAAAAGCATAAAATGCTACAAACTATCTTAAAATAAGAACTCCTAGTTTTTCTCCTCCATTGCAGATTAATGTGACAGTGAAAATAGATTTTATACAGGCGTACAATCACACTTATCTATCTTATGTTGAGAGTCTAATGTTTGAAGTGATATGGCCTGAAAAGGTGTTTATAAGAGGGAGATATCCCTCACCTTGTAAATTGGTTTTTGTAGGTTTGAGTTAGGCTGAACCTATATTCTAAGATGGTATCAAAGCCTATCAAAGATCCGTGAGCCACTCATTTTCGGACCACTCGGGTCACACTGTAGTTGTCTAATACTTGGTGTGTGTTGAGAGTCCCACAGTGAATCATTTGGATGTGATATGGGCTAAAAAATTGATCAAAAGTGAGAGGCATCTCTCACCCTACAAACCTGTTTTGTAGGTTTGAGTTGGACCAAACCCAAGTTCTAATATTGTACCACAATAAAAGCAATTTTTAAGAAATAATATCATGACACGACTATGTTGTGCATTGTTTGTATGTGAAAACCTGTTTACACTGATAATGTACATTTATAAATTTATTTAACAAAAATTAGACTCATTGATGGACACAGATTAAAAGGATAAACAAGGTGTTCTGGTAATGAGCATGGGTTGGTGTTGTCACACATGGGTGTGGCATGACATCTTGTTGGGTTAGAGTTTGTTTTTTCTCACCACACTTAATTACAGAGTTGCTTTCTTGAATTATAGACGTTTCCTTTATATTACTATCCCATACAGATTTCTATAATGAGAGATAAGAAGTGTTTGGTTATTTATAATTCATATGAATGGCCAGAAAATACAAGACTCCTTTTGACATAACTTTTAAACTGTCAGGCTGATTTGCGCCTTGCCGACTTCCGTGCCAAGCAACGTGCCATGGAAGATGCCCTTATGTCCTTGGAGGTGATATTTTATACTTCGCATGTGTTCACTTAGGAACCATGTGTTCACTTAGGAACCTTTTTTTTTTTTTTTTTTTTTTTTTTTATAAAAACAAAAGTTTAAGCTCCAAATAAATAAATTTGTTCTATTGCATCATTATTGCAGCTGATCAAAAACATCCATGACATGATGGTGAGCAAGACTTATAACTTGTAAGTCAAGTAACTTTAAATTACTTCTTATACATGCAATAAATTCTATAATGTTTCATTCGATGTTTGTTGGATGTGACTCATAGTGTATTGATAAGAAGGCTGCGTGGAGGGTGAAGCCCCCGTGGTATGGTCCAGGGGTAATCTTGTAAACTGGACCATAGTTTTCTTTTTGAATGGAAAATGTTAGTATTAGTTGTTAGATTAATATTTACTCATTCACCCGGGTTTGAATTCAAGACCTCCAACTCCTTTAACCCTCGGCTCAAACCAGTTGAGTTACCCAACCCCCCCAAACTGGACCGTAGTATTTAATTATTTAAACACAAGTTGTACTATGTAAACCATAAACTTGATTAATAGAAAGATACTGCAGCCGCTCTGAATTCCGAGATGTAGACACAATTGGCTGAACTCTGTGATAAAAAATTGTGTGTTCCTTTCCTTGTCTGCGTTTTTCATATTTGTTTTCTTTTGAACCGAGTTTGCTTTTCTGACAATGTTGTGGTGCAGTCCTATTTTCAGAGATAAGGGATCTCTCTCAGAAAATAATGTTAGAGGTCGAATCATGCTTGAAAAGAATGGAAGAACCACAAATTCCTTTCTTGGGGATGTGACGGCAGAACGGATTACTGCTCTTCAGGTCTTTCTTCTTTTCCATTTTCTTTTCAGGTTCTATTTCAATACGAAACAGTTCCCCTAATTCAGTATGAATCAGGAAACATATCAATCATCACGTACTAAGATTTTAGTATCTATAGGAAGCTTACTGGAGTATGGCATCTGCACTTTCTGAAGCAGATGGAATTGATTACACTGATCCTGAAGAGGTTAGTTTAGCTTCCTGATAAAGTTTTATGATCGACATTCCTATCACTATTTATGCATTCATAGTAAACACACTTTTCTACTTTGAGCAGCTTGAATTGTTAATCACAACTCTTATAGACCTTGATGCAATGGACGGTAAACACAGTGTATCTTTGTTGGCAGAGTGTTCTAGTTCCCCTGATGTCGGTACCAGGTAAGGTTCCTTTGATGTTAAGATCTTTCAGGAATCAGATCACATTCTCTATCCAATGCACCTATATGCCATGATGTTTGTTAGTATGATTGGCACCTAGTATGAGTTTGTACTATTCATAATTGACATATTTTCGTCATTCTTTGACAAGGTCAAAACATTCTCAATTGCAGGAAAATTAGAATTCCCTCAAACCAAGTTATGCAATATTGAATTAGTAATTAAGAAGTAGTAAAAAATAGTTAGCTAACTGATTACTCTATTTCTAAAAAATATGTGGTAATGAGTAGTAACATTCATAGAGATCACTTGGAAATAAACCTGCCAAATAAAGAGCAAGTGTAAAATATGTGAGTATAGGATTATTCTCCATACGTTCATATATATCATGATTTATGTTGTAAAAAATAGTGTATAGTATCAATATGAATATGAATAGGGATTAGTATTTTATCGTTTCTAATTCCACCTAGCATATTATCATCTCATATTAAATATCAATTTCAGTTTATATCATCTCCTTTGTACTCTCTCTTTAAGTATATAATAACTAAAACTTAAAACCTTATAATTGAAATGGCTAGCGTGAATGCAAAATATTACGACCTTTGCTTATTTTCCTTGTCCATGCATGTAAACTTCTAGACGAGCTTTAGCGAAGGCACTGGCAGCAGCACCATCTATGTGGACTCTTGGAAACGCAGGGATGGGGGCATTACAGGTCTGTGATTTGTCATTTTTCGTAGAAAGTACTTTTCAAGAACAGTGATTATCAGATAAAATAATCTCGAGAATATTTTTAGAGATTTTTATTTGAAGCTGAAGTTGATTTGTGTTTGTTTATAATAGTGAAAATCACTTCTTTAATATTTTCTCTCATATACCCCATTCCTTAAAATCATTTTTTTTAGAAGCTACTATAAATTATAGCTTCTCATTTTAATCAAAAGTAGTTATTTTTTAGATTCTGATTAGTTTAGAAAACTTAAACACACATAAAACCACTAGAAATGCTTTTTTTTAATTAAAAAAAAAAAAGTTAATTTTCTTTTGAATAGTCTAAAAAGACGATCTCATATAGTTTCAAATTTTCCCTTTAGCAAAGTTGACACATTTGGTTCTTGTTGTAGAGGCTGGCCGAGGATAGCAATCCAGCCATTGCAGCTGCAGCATCCAAAGCTATATATGAACTGAAAAAGCAATGGGAAATAGAAGAAGGGGATAGTTGGAGGTTTATGATGGATGAAAGCAGCAAGGAAGAAAATGAAACCTGA

Protein sequence

>MS.gene064519.t1

MALTANKVSSGPILTNRATLCRSHGSSSPRINRIQFSRVRLENGHLNNDSVLNERSTLFNDWFRFINGRNPVSLISKTSSVSCKSTGANNTEEKECVTTYDDVSDLTRRHAEDEKNDRIRSVRGLSEAYRFACNDAKFLSRGIMRMDERARQDVAFLGTEFLKLDARARKDTEKIDRGVKEKAKRLNRIATILKDIAQTRLKSAADEHWSDGALEADLRLADFRAKQRAMEDALMSLELIKNIHDMMVSKTYNFPIFRDKGSLSENNVRGRIMLEKNGRTTNSFLGDVTAERITALQEAYWSMASALSEADGIDYTDPEELELLITTLIDLDAMDGKHSVSLLAECSSSPDVGTRRALAKALAAAPSMWTLGNAGMGALQRLAEDSNPAIAAAASKAIYELKKQWEIEEGDSWRFMMDESSKEENET