Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055413.t1 | XP_013443860.1 | 98 | 247 | 5 | 0 | 1 | 247 | 11 | 257 | 3.00E-135 | 491.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055413.t1 | Q54YW1 | 28.6 | 213 | 133 | 2 | 43 | 237 | 358 | 569 | 5.0e-22 | 106.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055413.t1 | A0A072TWK6 | 98.0 | 247 | 5 | 0 | 1 | 247 | 11 | 257 | 2.2e-135 | 491.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050762 | MS.gene055413 | 0.814406 | 1.57E-51 | -1.69E-46 |
| MS.gene050763 | MS.gene055413 | 0.815436 | 9.26E-52 | -1.69E-46 |
| MS.gene052970 | MS.gene055413 | -0.80102 | 1.10E-48 | -1.69E-46 |
| MS.gene055413 | MS.gene063544 | 0.813982 | 1.94E-51 | -1.69E-46 |
| MS.gene055413 | MS.gene072564 | 0.826467 | 2.67E-54 | -1.69E-46 |
| MS.gene055413 | MS.gene072565 | 0.830476 | 2.87E-55 | -1.69E-46 |
| MS.gene055413 | MS.gene34314 | -0.825664 | 4.14E-54 | -1.69E-46 |
| MS.gene055413 | MS.gene34316 | -0.824979 | 6.02E-54 | -1.69E-46 |
| MS.gene055413 | MS.gene34317 | -0.820035 | 8.48E-53 | -1.69E-46 |
| MS.gene055413 | MS.gene54356 | 0.805175 | 1.52E-49 | -1.69E-46 |
| MS.gene055413 | MS.gene68171 | 0.804109 | 2.53E-49 | -1.69E-46 |
| MS.gene055413 | MS.gene68877 | 0.826028 | 3.40E-54 | -1.69E-46 |
| MS.gene055413 | MS.gene68933 | 0.801373 | 9.28E-49 | -1.69E-46 |
| MS.gene055413 | MS.gene68959 | 0.819092 | 1.39E-52 | -1.69E-46 |
| MS.gene055413 | MS.gene70378 | 0.802674 | 5.02E-49 | -1.69E-46 |
| MS.gene055413 | MS.gene70819 | 0.805741 | 1.15E-49 | -1.69E-46 |
| MS.gene055413 | MS.gene76478 | 0.805624 | 1.22E-49 | -1.69E-46 |
| MS.gene055413 | MS.gene78973 | 0.800606 | 1.33E-48 | -1.69E-46 |
| MS.gene055413 | MS.gene99154 | 0.975162 | 1.89E-139 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055413.t1 | MTR_8g007175 | 97.976 | 247 | 5 | 0 | 1 | 247 | 11 | 257 | 0.0 | 498 |
| MS.gene055413.t1 | MTR_8g007175 | 96.721 | 244 | 8 | 0 | 4 | 247 | 19 | 262 | 4.81e-175 | 482 |
| MS.gene055413.t1 | MTR_8g007175 | 95.833 | 216 | 9 | 0 | 4 | 219 | 19 | 234 | 8.55e-154 | 427 |
| MS.gene055413.t1 | MTR_8g007175 | 97.170 | 212 | 6 | 0 | 4 | 215 | 19 | 230 | 7.40e-153 | 424 |
| MS.gene055413.t1 | MTR_7g081300 | 79.268 | 246 | 50 | 1 | 3 | 247 | 21 | 266 | 2.19e-141 | 397 |
| MS.gene055413.t1 | MTR_7g081300 | 82.160 | 213 | 38 | 0 | 3 | 215 | 21 | 233 | 1.12e-129 | 366 |
| MS.gene055413.t1 | MTR_8g007175 | 96.341 | 164 | 6 | 0 | 4 | 167 | 19 | 182 | 4.13e-114 | 325 |
| MS.gene055413.t1 | MTR_0258s0040 | 55.187 | 241 | 105 | 2 | 6 | 245 | 32 | 270 | 4.22e-96 | 282 |
| MS.gene055413.t1 | MTR_0258s0040 | 54.959 | 242 | 105 | 3 | 6 | 245 | 32 | 271 | 2.25e-94 | 278 |
| MS.gene055413.t1 | MTR_3g085460 | 59.746 | 236 | 93 | 2 | 13 | 246 | 26 | 261 | 5.60e-93 | 274 |
| MS.gene055413.t1 | MTR_0258s0040 | 55.983 | 234 | 99 | 3 | 14 | 245 | 1 | 232 | 8.08e-93 | 273 |
| MS.gene055413.t1 | MTR_3g085460 | 59.746 | 236 | 93 | 2 | 13 | 246 | 14 | 249 | 1.02e-92 | 273 |
| MS.gene055413.t1 | MTR_7g087440 | 55.510 | 245 | 93 | 3 | 10 | 245 | 80 | 317 | 1.46e-90 | 270 |
| MS.gene055413.t1 | MTR_3g085460 | 63.351 | 191 | 68 | 2 | 58 | 246 | 1 | 191 | 7.63e-86 | 253 |
| MS.gene055413.t1 | MTR_0258s0040 | 55.556 | 216 | 93 | 2 | 6 | 220 | 32 | 245 | 1.95e-83 | 249 |
| MS.gene055413.t1 | MTR_0258s0040 | 55.556 | 216 | 93 | 2 | 6 | 220 | 48 | 261 | 3.46e-83 | 249 |
| MS.gene055413.t1 | MTR_3g085460 | 59.135 | 208 | 84 | 1 | 13 | 219 | 14 | 221 | 4.26e-80 | 240 |
| MS.gene055413.t1 | MTR_0258s0040 | 55.625 | 160 | 69 | 1 | 6 | 165 | 48 | 205 | 3.31e-61 | 192 |
| MS.gene055413.t1 | MTR_3g085460 | 60.256 | 156 | 62 | 0 | 13 | 168 | 14 | 169 | 1.31e-57 | 181 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055413.t1 | AT2G44770 | 82.353 | 238 | 41 | 1 | 11 | 247 | 29 | 266 | 5.99e-146 | 409 |
| MS.gene055413.t1 | AT3G60260 | 77.731 | 238 | 52 | 1 | 11 | 247 | 29 | 266 | 2.31e-138 | 389 |
| MS.gene055413.t1 | AT3G60260 | 77.731 | 238 | 52 | 1 | 11 | 247 | 29 | 266 | 2.31e-138 | 389 |
| MS.gene055413.t1 | AT3G60260 | 77.731 | 238 | 52 | 1 | 11 | 247 | 29 | 266 | 2.31e-138 | 389 |
| MS.gene055413.t1 | AT3G60260 | 76.987 | 239 | 54 | 1 | 10 | 247 | 6 | 244 | 3.02e-138 | 388 |
| MS.gene055413.t1 | AT3G03610 | 58.091 | 241 | 97 | 3 | 10 | 247 | 96 | 335 | 1.43e-95 | 283 |
| MS.gene055413.t1 | AT3G03610 | 58.091 | 241 | 97 | 3 | 10 | 247 | 84 | 323 | 1.63e-95 | 283 |
| MS.gene055413.t1 | AT3G03610 | 58.091 | 241 | 97 | 3 | 10 | 247 | 84 | 323 | 1.63e-95 | 283 |
| MS.gene055413.t1 | AT3G03610 | 58.091 | 241 | 97 | 3 | 10 | 247 | 84 | 323 | 1.63e-95 | 283 |
| MS.gene055413.t1 | AT1G03620 | 56.250 | 240 | 100 | 4 | 8 | 245 | 27 | 263 | 2.40e-93 | 275 |
| MS.gene055413.t1 | AT1G03620 | 56.250 | 240 | 100 | 4 | 8 | 245 | 27 | 263 | 2.40e-93 | 275 |
| MS.gene055413.t1 | AT1G03620 | 56.250 | 240 | 100 | 4 | 8 | 245 | 27 | 263 | 2.40e-93 | 275 |
| MS.gene055413.t1 | AT1G03620 | 56.250 | 240 | 100 | 4 | 8 | 245 | 27 | 263 | 2.40e-93 | 275 |
| MS.gene055413.t1 | AT1G03620 | 56.250 | 240 | 100 | 4 | 8 | 245 | 27 | 263 | 2.40e-93 | 275 |
| MS.gene055413.t1 | AT1G03620 | 56.250 | 240 | 100 | 4 | 8 | 245 | 27 | 263 | 2.40e-93 | 275 |
| MS.gene055413.t1 | AT1G03620 | 56.250 | 240 | 100 | 4 | 8 | 245 | 27 | 263 | 2.40e-93 | 275 |
| MS.gene055413.t1 | AT1G03620 | 56.250 | 240 | 100 | 4 | 8 | 245 | 27 | 263 | 2.40e-93 | 275 |
| MS.gene055413.t1 | AT1G03620 | 56.250 | 240 | 100 | 4 | 8 | 245 | 27 | 263 | 2.40e-93 | 275 |
| MS.gene055413.t1 | AT1G67400 | 55.932 | 236 | 102 | 2 | 13 | 246 | 46 | 281 | 3.38e-93 | 275 |
| MS.gene055413.t1 | AT1G03620 | 57.265 | 234 | 95 | 4 | 14 | 245 | 1 | 231 | 8.01e-93 | 273 |
| MS.gene055413.t1 | AT1G03620 | 57.265 | 234 | 95 | 4 | 14 | 245 | 1 | 231 | 8.01e-93 | 273 |
| MS.gene055413.t1 | AT1G03620 | 57.265 | 234 | 95 | 4 | 14 | 245 | 1 | 231 | 8.01e-93 | 273 |
| MS.gene055413.t1 | AT1G03620 | 56.250 | 240 | 100 | 4 | 8 | 245 | 59 | 295 | 1.16e-92 | 275 |
| MS.gene055413.t1 | AT3G43400 | 61.429 | 140 | 50 | 1 | 80 | 219 | 72 | 207 | 2.20e-57 | 182 |
Find 61 sgRNAs with CRISPR-Local
Find 357 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGAGGCCCTTAAGGCTTTA+TGG | 0.246095 | 8.1:-86507307 | MS.gene055413:CDS |
| ATTGCAGCTGAGGCTGTTGC+AGG | 0.306569 | 8.1:-86508156 | MS.gene055413:intron |
| TACTTTGTAGAAATCCTTCC+AGG | 0.323437 | 8.1:-86506847 | MS.gene055413:intron |
| GAGTACCCGTTTGCCGTTGC+TGG | 0.351816 | 8.1:-86506786 | MS.gene055413:CDS |
| CATATTACAGGAGGCCCTTA+AGG | 0.367402 | 8.1:-86507315 | MS.gene055413:intron |
| GTTCTTTGCTAGGAATTTCC+CGG | 0.374040 | 8.1:-86507066 | MS.gene055413:intron |
| TTGACGAACCAATGCAAGTT+AGG | 0.377830 | 8.1:+86509673 | None:intergenic |
| AACCTTCCATAAAGCCTTAA+GGG | 0.393515 | 8.1:+86507301 | None:intergenic |
| CAACCTTCCATAAAGCCTTA+AGG | 0.400193 | 8.1:+86507300 | None:intergenic |
| TAAGCCACGAAGTTCTTCTT+CGG | 0.404370 | 8.1:+86507271 | None:intergenic |
| ATCTACCTAAAATCTGTTGA+TGG | 0.405572 | 8.1:+86507206 | None:intergenic |
| AAGCCACGAAGTTCTTCTTC+GGG | 0.407421 | 8.1:+86507272 | None:intergenic |
| ATCGGAGCAGTGGAAGGAAA+TGG | 0.419607 | 8.1:-86507246 | MS.gene055413:CDS |
| CAATCCTCAGGAGGAGTGCT+TGG | 0.425788 | 8.1:-86507523 | MS.gene055413:intron |
| AATCCTTCCAGGATCTGTTA+TGG | 0.430424 | 8.1:-86506836 | MS.gene055413:CDS |
| TTCTATGCGTGCCTCATACA+TGG | 0.433966 | 8.1:-86506084 | MS.gene055413:CDS |
| TTAACACCAGCAACGGCAAA+CGG | 0.441947 | 8.1:+86506780 | None:intergenic |
| CCCGCTTCCATAACAGATCC+TGG | 0.454139 | 8.1:+86506829 | None:intergenic |
| AGAACTTCGTGGCTTAATAT+CGG | 0.455601 | 8.1:-86507264 | MS.gene055413:CDS |
| TCGTGAAAGTAGTTTGTATG+AGG | 0.464656 | 8.1:+86504180 | None:intergenic |
| GATAATATCCTAACTTGCAT+TGG | 0.470685 | 8.1:-86509681 | MS.gene055413:intron |
| TACATTGAAATCCATGTATG+AGG | 0.482849 | 8.1:+86506073 | None:intergenic |
| CTGCATAGCTTTCAAGCTGA+TGG | 0.486549 | 8.1:-86506120 | MS.gene055413:CDS |
| TCGTGATCTATTCTGATGAT+TGG | 0.496429 | 8.1:-86509705 | None:intergenic |
| CCAGGATCTGTTATGGAAGC+GGG | 0.507175 | 8.1:-86506829 | MS.gene055413:CDS |
| CGAATAGAAGTTCCATATGA+TGG | 0.509767 | 8.1:-86507486 | MS.gene055413:CDS |
| TAACACCAGCAACGGCAAAC+GGG | 0.511885 | 8.1:+86506781 | None:intergenic |
| TACGTGTTTGTCAGGGGTGG+TGG | 0.512647 | 8.1:-86507113 | MS.gene055413:intron |
| TCGGAGCAGTGGAAGGAAAT+GGG | 0.513871 | 8.1:-86507245 | MS.gene055413:CDS |
| CAGATGCTTGATCTTGAAGC+AGG | 0.530750 | 8.1:-86506738 | MS.gene055413:intron |
| GGCCCTTAAGGCTTTATGGA+AGG | 0.535713 | 8.1:-86507303 | MS.gene055413:CDS |
| TCCAGGATCTGTTATGGAAG+CGG | 0.539765 | 8.1:-86506830 | MS.gene055413:CDS |
| CTTAATATCGGAGCAGTGGA+AGG | 0.541259 | 8.1:-86507252 | MS.gene055413:CDS |
| TCAGCAGCATGGCTTGGTAG+AGG | 0.553664 | 8.1:-86508132 | MS.gene055413:CDS |
| TCAACTATAGAACCATCATA+TGG | 0.554157 | 8.1:+86507474 | None:intergenic |
| TACAGTCAAGCCACGCACAT+TGG | 0.554540 | 8.1:-86506359 | MS.gene055413:intron |
| GCAGGATCAGCAGCATGGCT+TGG | 0.554647 | 8.1:-86508138 | MS.gene055413:CDS |
| TTTCCCGAAGAAGAACTTCG+TGG | 0.555604 | 8.1:-86507275 | MS.gene055413:CDS |
| CAGAGAAGAGATAGCGACGC+GGG | 0.556319 | 8.1:-86508090 | MS.gene055413:CDS |
| GGAAGGAAATGGGTTGGCAA+GGG | 0.557960 | 8.1:-86507235 | MS.gene055413:CDS |
| GTCAAGCCACGCACATTGGT+GGG | 0.558796 | 8.1:-86506355 | MS.gene055413:CDS |
| AGTCAAGCCACGCACATTGG+TGG | 0.560143 | 8.1:-86506356 | MS.gene055413:CDS |
| GGAAATGGGTTGGCAAGGGA+AGG | 0.561744 | 8.1:-86507231 | MS.gene055413:CDS |
| TCAAGCTGATGGATCACCAA+TGG | 0.564603 | 8.1:-86506109 | MS.gene055413:CDS |
| TGGAAGGAAATGGGTTGGCA+AGG | 0.569053 | 8.1:-86507236 | MS.gene055413:CDS |
| TGGTTCTATAGTTGAGCACC+AGG | 0.582856 | 8.1:-86507466 | MS.gene055413:intron |
| AGCAGTGGAAGGAAATGGGT+TGG | 0.590956 | 8.1:-86507241 | MS.gene055413:CDS |
| CGTGAAAGTAGTTTGTATGA+GGG | 0.600468 | 8.1:+86504181 | None:intergenic |
| AGGCACGCATAGAAAGCCAT+TGG | 0.608578 | 8.1:+86506093 | None:intergenic |
| GTGGCTTAATATCGGAGCAG+TGG | 0.619933 | 8.1:-86507256 | MS.gene055413:CDS |
| CTTCCATAACAGATCCTGGA+AGG | 0.623421 | 8.1:+86506833 | None:intergenic |
| TGTGATGTTAACACCAGCAA+CGG | 0.623780 | 8.1:+86506773 | None:intergenic |
| GGCAAACGGGTACTCCCACA+CGG | 0.625303 | 8.1:+86506794 | None:intergenic |
| CTGTTGCAGGATCAGCAGCA+TGG | 0.627647 | 8.1:-86508143 | MS.gene055413:CDS |
| GGAAGGAGATCGTTCCGTGT+GGG | 0.632019 | 8.1:-86506808 | MS.gene055413:CDS |
| TGTTAACATCACATTCATGC+TGG | 0.645069 | 8.1:-86506763 | MS.gene055413:CDS |
| GTTGCTCCCACCAATGTGCG+TGG | 0.646210 | 8.1:+86506349 | None:intergenic |
| CTCAGGAGGAGTGCTTGGAG+AGG | 0.653461 | 8.1:-86507518 | MS.gene055413:intron |
| GGGAAGGAGATCGTTCCGTG+TGG | 0.666337 | 8.1:-86506809 | MS.gene055413:CDS |
| GATCTGTTATGGAAGCGGGA+AGG | 0.674343 | 8.1:-86506825 | MS.gene055413:CDS |
| ACAGAGAAGAGATAGCGACG+CGG | 0.810969 | 8.1:-86508091 | MS.gene055413:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAAAACTC+TGG | + | chr8.1:86505937-86505956 | None:intergenic | 10.0% |
| !! | AATACTATAAAAATTAAGTA+AGG | + | chr8.1:86508271-86508290 | None:intergenic | 10.0% |
| !! | TAATTATAAAAATATTACCT+GGG | + | chr8.1:86505826-86505845 | None:intergenic | 10.0% |
| !! | TTAAAAAATTTAAGAGTTTA+AGG | - | chr8.1:86508593-86508612 | MS.gene055413:intron | 10.0% |
| !! | TTAATTATAAAAATATTACC+TGG | + | chr8.1:86505827-86505846 | None:intergenic | 10.0% |
| !!! | ATAAGTAAATTTTTTTTGTA+GGG | - | chr8.1:86508654-86508673 | MS.gene055413:intron | 10.0% |
| !!! | TATAAGTAAATTTTTTTTGT+AGG | - | chr8.1:86508653-86508672 | MS.gene055413:intron | 10.0% |
| !! | AAATTCAATTGTATTATTCA+TGG | - | chr8.1:86504423-86504442 | MS.gene055413:intron | 15.0% |
| !! | AAGCATAAATTAAACAAATT+TGG | + | chr8.1:86508343-86508362 | None:intergenic | 15.0% |
| !! | AATAGAGAAATTATAATAAC+AGG | + | chr8.1:86507167-86507186 | None:intergenic | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+AGG | - | chr8.1:86508683-86508702 | MS.gene055413:intron | 15.0% |
| !! | ATTTCAATAAAATCCTAAAA+AGG | + | chr8.1:86504344-86504363 | None:intergenic | 15.0% |
| !! | GTATCAATAAAAATCATTAA+CGG | + | chr8.1:86506737-86506756 | None:intergenic | 15.0% |
| !! | TAAAAATACTTGAACTTATA+GGG | - | chr8.1:86509356-86509375 | MS.gene055413:intron | 15.0% |
| !! | TAATATAACTATTAATGTTC+TGG | - | chr8.1:86509588-86509607 | MS.gene055413:intron | 15.0% |
| !! | TAATTCTTATCTTAGTTATA+AGG | + | chr8.1:86509258-86509277 | None:intergenic | 15.0% |
| !! | TATATATCCTTTGTTAAATT+TGG | + | chr8.1:86507869-86507888 | None:intergenic | 15.0% |
| !!! | AAACAAAATTTATTTTAGCA+GGG | - | chr8.1:86508622-86508641 | MS.gene055413:intron | 15.0% |
| !!! | AAGATTTATTTTTCGATATT+TGG | + | chr8.1:86506069-86506088 | None:intergenic | 15.0% |
| !!! | AATTTTTGCGATATTTTTTT+CGG | + | chr8.1:86508427-86508446 | None:intergenic | 15.0% |
| !!! | AGAAAATATTTTATCAAACA+AGG | - | chr8.1:86509214-86509233 | MS.gene055413:intron | 15.0% |
| !!! | ATTAACCCTTTAAAAAATTT+AGG | - | chr8.1:86508749-86508768 | MS.gene055413:intron | 15.0% |
| !!! | ATTTGTTTGTTTTTTTGTAT+TGG | - | chr8.1:86506923-86506942 | MS.gene055413:intron | 15.0% |
| !!! | ATTTTAATGATGATAAATGT+CGG | + | chr8.1:86509467-86509486 | None:intergenic | 15.0% |
| !!! | TAAACAAAATTTATTTTAGC+AGG | - | chr8.1:86508621-86508640 | MS.gene055413:intron | 15.0% |
| !!! | TAAGGTGAAAAATATATTTT+TGG | - | chr8.1:86508864-86508883 | MS.gene055413:intron | 15.0% |
| !!! | TCAAATAAGTTTGTTAAAAA+GGG | - | chr8.1:86508098-86508117 | MS.gene055413:CDS | 15.0% |
| !!! | TTATAAGGTATAAAAGTATA+AGG | + | chr8.1:86509243-86509262 | None:intergenic | 15.0% |
| !! | AAATGTCTTAAATGAGTTTA+AGG | + | chr8.1:86508985-86509004 | None:intergenic | 20.0% |
| !! | AACAAAAACTATGAATACAT+AGG | + | chr8.1:86506476-86506495 | None:intergenic | 20.0% |
| !! | AACCAAAAAATAAATCATAC+CGG | + | chr8.1:86506823-86506842 | None:intergenic | 20.0% |
| !! | ATTGCAAATTGTTTCATATA+AGG | + | chr8.1:86508923-86508942 | None:intergenic | 20.0% |
| !! | CAAATAAAATTGTCATGAAT+AGG | - | chr8.1:86509415-86509434 | MS.gene055413:intron | 20.0% |
| !! | CAGAATTTCATAAGATAAAA+GGG | + | chr8.1:86506244-86506263 | None:intergenic | 20.0% |
| !! | GATTGAAAATTCAACATTAT+GGG | + | chr8.1:86506329-86506348 | None:intergenic | 20.0% |
| !! | GTAAAAATACTTGAACTTAT+AGG | - | chr8.1:86509355-86509374 | MS.gene055413:intron | 20.0% |
| !! | TAAAATGTAGAAATTCACTA+GGG | - | chr8.1:86508836-86508855 | MS.gene055413:intron | 20.0% |
| !! | TAAATGACTATCAATGTATA+TGG | + | chr8.1:86508891-86508910 | None:intergenic | 20.0% |
| !! | TATGTCATTATTAATGATCT+TGG | + | chr8.1:86507406-86507425 | None:intergenic | 20.0% |
| !! | TTAAAATGTAGAAATTCACT+AGG | - | chr8.1:86508835-86508854 | MS.gene055413:intron | 20.0% |
| !!! | AAAAGGGTTAATTATGTTTT+TGG | - | chr8.1:86508213-86508232 | MS.gene055413:intron | 20.0% |
| !!! | AAGTTTTCAAAGATTTGTAT+AGG | + | chr8.1:86509147-86509166 | None:intergenic | 20.0% |
| !!! | ACAAACTTATTTGAGTTTAA+AGG | + | chr8.1:86508092-86508111 | None:intergenic | 20.0% |
| !!! | ATCTTTTGAAGATGATAAAT+GGG | - | chr8.1:86505487-86505506 | MS.gene055413:intron | 20.0% |
| !!! | ATTTTTTTATGGATCAAAAG+AGG | - | chr8.1:86507582-86507601 | MS.gene055413:intron | 20.0% |
| !!! | CAAACTTATTTGAGTTTAAA+GGG | + | chr8.1:86508091-86508110 | None:intergenic | 20.0% |
| !!! | CTATATGCAAGTTTTAAATT+CGG | - | chr8.1:86508958-86508977 | MS.gene055413:intron | 20.0% |
| !!! | CTCAAATAAGTTTGTTAAAA+AGG | - | chr8.1:86508097-86508116 | MS.gene055413:CDS | 20.0% |
| !!! | CTTTTGATCCATAAAAAAAT+CGG | + | chr8.1:86507582-86507601 | None:intergenic | 20.0% |
| !!! | GTAAATTTGATTTACGTTTA+TGG | - | chr8.1:86508059-86508078 | MS.gene055413:intron | 20.0% |
| !!! | GTTTTTCAACAATTTTTTAC+AGG | - | chr8.1:86508373-86508392 | MS.gene055413:intron | 20.0% |
| !!! | TAAAGGGTTAATTATGTTTT+TGG | + | chr8.1:86508741-86508760 | None:intergenic | 20.0% |
| !!! | TACAGAGTATAATAAGTTTT+AGG | + | chr8.1:86507002-86507021 | None:intergenic | 20.0% |
| !!! | TCTGACCTAAATTTTTTAAA+GGG | + | chr8.1:86508757-86508776 | None:intergenic | 20.0% |
| !!! | TTCTGACCTAAATTTTTTAA+AGG | + | chr8.1:86508758-86508777 | None:intergenic | 20.0% |
| !!! | TTGTAATCTTTTTCATGAAT+AGG | - | chr8.1:86509385-86509404 | MS.gene055413:intron | 20.0% |
| !!! | TTTTGATCCATAAAAAAATC+GGG | + | chr8.1:86507581-86507600 | None:intergenic | 20.0% |
| ! | AAACAAATTTGGATTGAGTA+AGG | + | chr8.1:86508332-86508351 | None:intergenic | 25.0% |
| ! | AAACTTGCATATAGGAAATT+AGG | + | chr8.1:86508952-86508971 | None:intergenic | 25.0% |
| ! | AAAGACATAATCTCTTGATA+TGG | - | chr8.1:86508155-86508174 | MS.gene055413:intron | 25.0% |
| ! | AAATTGTTTCATATAAGGAC+CGG | + | chr8.1:86508918-86508937 | None:intergenic | 25.0% |
| ! | AATCAAAGTTTACTATGGAA+AGG | - | chr8.1:86506891-86506910 | MS.gene055413:intron | 25.0% |
| ! | ACATCATGCATATAACAATA+TGG | + | chr8.1:86505362-86505381 | None:intergenic | 25.0% |
| ! | ACCAAAAAATAAATCATACC+GGG | + | chr8.1:86506822-86506841 | None:intergenic | 25.0% |
| ! | ATTGTAATAGAAATGATACC+TGG | + | chr8.1:86506422-86506441 | None:intergenic | 25.0% |
| ! | ATTGTGACGAATAAATAACT+TGG | - | chr8.1:86506859-86506878 | MS.gene055413:intron | 25.0% |
| ! | CCAGAATTTCATAAGATAAA+AGG | + | chr8.1:86506245-86506264 | None:intergenic | 25.0% |
| ! | GACTTTAATGTACATATTAC+AGG | - | chr8.1:86506540-86506559 | MS.gene055413:intron | 25.0% |
| ! | GGATTGAAAATTCAACATTA+TGG | + | chr8.1:86506330-86506349 | None:intergenic | 25.0% |
| ! | GTGTTAAGAACGTTATTAAA+AGG | - | chr8.1:86508397-86508416 | MS.gene055413:intron | 25.0% |
| ! | TAAAATCCTAAAAAGGTAAC+TGG | + | chr8.1:86504337-86504356 | None:intergenic | 25.0% |
| ! | TAAATCTATTCATGTTTGTC+TGG | - | chr8.1:86507693-86507712 | MS.gene055413:intron | 25.0% |
| ! | TAGAAATAGGGAAAATAGTA+TGG | - | chr8.1:86507838-86507857 | MS.gene055413:intron | 25.0% |
| ! | TATGAAAGACAAACAAGAAA+AGG | + | chr8.1:86506115-86506134 | None:intergenic | 25.0% |
| ! | TGTCTTTCATATTGTGTATA+TGG | - | chr8.1:86506124-86506143 | MS.gene055413:CDS | 25.0% |
| ! | TTGCTTATGTGAATGTTATT+GGG | + | chr8.1:86504780-86504799 | None:intergenic | 25.0% |
| ! | TTGTGACGAATAAATAACTT+GGG | - | chr8.1:86506860-86506879 | MS.gene055413:intron | 25.0% |
| ! | TTTAATGTACATATTACAGG+AGG | - | chr8.1:86506543-86506562 | MS.gene055413:intron | 25.0% |
| ! | TTTGATCCATAAAAAAATCG+GGG | + | chr8.1:86507580-86507599 | None:intergenic | 25.0% |
| !! | AACATTATGGGAAAATTTTG+AGG | + | chr8.1:86506317-86506336 | None:intergenic | 25.0% |
| !! | AATCTAAAGCTAAGAAGTAA+AGG | + | chr8.1:86509550-86509569 | None:intergenic | 25.0% |
| !! | ACATTTGATTTCAGAAAGTA+CGG | - | chr8.1:86508999-86509018 | MS.gene055413:intron | 25.0% |
| !! | ACCATGATTTTATAGAAACT+GGG | - | chr8.1:86504973-86504992 | MS.gene055413:intron | 25.0% |
| !! | ATGACATGATATTTTCACTT+TGG | + | chr8.1:86509172-86509191 | None:intergenic | 25.0% |
| !! | ATGCAAGAAAATACAGTTTT+TGG | - | chr8.1:86506155-86506174 | MS.gene055413:intron | 25.0% |
| !! | ATTGATAGTCATTTAAACTC+CGG | - | chr8.1:86508896-86508915 | MS.gene055413:intron | 25.0% |
| !! | CCTTTTATCTTATGAAATTC+TGG | - | chr8.1:86506242-86506261 | MS.gene055413:intron | 25.0% |
| !! | CGAATTTAAAACTTGCATAT+AGG | + | chr8.1:86508960-86508979 | None:intergenic | 25.0% |
| !! | GAACCACAAAAACATTTTAA+TGG | - | chr8.1:86509437-86509456 | MS.gene055413:intron | 25.0% |
| !! | TACCATGATTTTATAGAAAC+TGG | - | chr8.1:86504972-86504991 | MS.gene055413:intron | 25.0% |
| !!! | AACAAAACTGTTTTGAAGTT+AGG | - | chr8.1:86507302-86507321 | MS.gene055413:CDS | 25.0% |
| !!! | ACAAAACTGTTTTGAAGTTA+GGG | - | chr8.1:86507303-86507322 | MS.gene055413:CDS | 25.0% |
| !!! | ACTAGAGAGGTTTTAAAAAA+GGG | - | chr8.1:86508197-86508216 | MS.gene055413:intron | 25.0% |
| !!! | ACTTTTCTAAAGTTTCTTGA+AGG | - | chr8.1:86507539-86507558 | MS.gene055413:intron | 25.0% |
| !!! | CATCTTTTGAAGATGATAAA+TGG | - | chr8.1:86505486-86505505 | MS.gene055413:intron | 25.0% |
| !!! | CTAATCAGTTTTTAGTTTAG+TGG | - | chr8.1:86506200-86506219 | MS.gene055413:intron | 25.0% |
| !!! | GTTTTGTTATTTCATCTATC+TGG | + | chr8.1:86507290-86507309 | None:intergenic | 25.0% |
| !!! | TCTCCATTAAAATGTTTTTG+TGG | + | chr8.1:86509443-86509462 | None:intergenic | 25.0% |
| AAAACAAACATCCACTTTGT+AGG | - | chr8.1:86504670-86504689 | MS.gene055413:intron | 30.0% | |
| AAATTCACTAGGGAGAAATA+AGG | - | chr8.1:86508846-86508865 | MS.gene055413:intron | 30.0% | |
| AAGTAAGGACTAAACTTACA+AGG | - | chr8.1:86508698-86508717 | MS.gene055413:intron | 30.0% | |
| AAGTAAGGACTAAACTTACA+AGG | + | chr8.1:86508717-86508698 | None:intergenic | 30.0% | |
| AATCACAGTAACATGTTCAT+TGG | + | chr8.1:86504557-86504576 | None:intergenic | 30.0% | |
| ACATAATCTCTTGATATGGA+GGG | - | chr8.1:86508159-86508178 | MS.gene055413:intron | 30.0% | |
| AGTGCATAATTTGATTCAGT+GGG | - | chr8.1:86504604-86504623 | MS.gene055413:intron | 30.0% | |
| ATATTGTGTATATGGTCTGT+GGG | - | chr8.1:86506132-86506151 | MS.gene055413:CDS | 30.0% | |
| ATCACAGTAACATGTTCATT+GGG | + | chr8.1:86504556-86504575 | None:intergenic | 30.0% | |
| ATCTACCTAAAATCTGTTGA+TGG | + | chr8.1:86506664-86506683 | None:intergenic | 30.0% | |
| ATTAAGATGAACACAAGATC+TGG | + | chr8.1:86506709-86506728 | None:intergenic | 30.0% | |
| CCAGAAATCAAAGTTTACTA+TGG | - | chr8.1:86506886-86506905 | MS.gene055413:intron | 30.0% | |
| CTAAAAATTTCATCCCAAGT+TGG | + | chr8.1:86505648-86505667 | None:intergenic | 30.0% | |
| CTCAAATTCTGATAGGAAAA+CGG | - | chr8.1:86504400-86504419 | MS.gene055413:intron | 30.0% | |
| GTTAAATGGCAATAAATGCA+AGG | - | chr8.1:86509320-86509339 | MS.gene055413:intron | 30.0% | |
| GTTGCTTATGTGAATGTTAT+TGG | + | chr8.1:86504781-86504800 | None:intergenic | 30.0% | |
| TAATTTGATTCAGTGGGATA+AGG | - | chr8.1:86504610-86504629 | MS.gene055413:intron | 30.0% | |
| TACATTGAAATCCATGTATG+AGG | + | chr8.1:86507797-86507816 | None:intergenic | 30.0% | |
| TCAACTATAGAACCATCATA+TGG | + | chr8.1:86506396-86506415 | None:intergenic | 30.0% | |
| TCAGCATATGTAACATTGAA+AGG | + | chr8.1:86507332-86507351 | None:intergenic | 30.0% | |
| TCCCAGTTTCTATAAAATCA+TGG | + | chr8.1:86504977-86504996 | None:intergenic | 30.0% | |
| TCTTGTCAATCTCTGTTAAA+TGG | - | chr8.1:86509306-86509325 | MS.gene055413:intron | 30.0% | |
| TGCTTATGTGAATGTTATTG+GGG | + | chr8.1:86504779-86504798 | None:intergenic | 30.0% | |
| TTAGGATATAGATATGTGCA+TGG | + | chr8.1:86506984-86507003 | None:intergenic | 30.0% | |
| TTATTGATACGTGTTTGTCA+GGG | - | chr8.1:86506747-86506766 | MS.gene055413:CDS | 30.0% | |
| TTCAAGATGCAGTTATAAGA+GGG | + | chr8.1:86507977-86507996 | None:intergenic | 30.0% | |
| TTGCATAAATCAGTACAGAA+AGG | - | chr8.1:86507362-86507381 | MS.gene055413:intron | 30.0% | |
| TTTATTGATACGTGTTTGTC+AGG | - | chr8.1:86506746-86506765 | MS.gene055413:CDS | 30.0% | |
| TTTCAAGATGCAGTTATAAG+AGG | + | chr8.1:86507978-86507997 | None:intergenic | 30.0% | |
| ! | AGAATTTTCTGTTCTTTGCT+AGG | - | chr8.1:86506791-86506810 | MS.gene055413:CDS | 30.0% |
| ! | ATGTTGAATTTTCAATCCTC+AGG | - | chr8.1:86506332-86506351 | MS.gene055413:CDS | 30.0% |
| ! | CAAGTTTAGAACACTATGAA+AGG | + | chr8.1:86508559-86508578 | None:intergenic | 30.0% |
| ! | CCATAGTAAACTTTGATTTC+TGG | + | chr8.1:86506889-86506908 | None:intergenic | 30.0% |
| ! | GATAATATCCTAACTTGCAT+TGG | - | chr8.1:86504186-86504205 | MS.gene055413:CDS | 30.0% |
| ! | TACAAGGTCACAATTTTGTA+GGG | - | chr8.1:86508714-86508733 | MS.gene055413:intron | 30.0% |
| ! | TTACAAGGTCACAATTTTGT+AGG | - | chr8.1:86508713-86508732 | MS.gene055413:intron | 30.0% |
| ! | TTGATTCCAGTTACCTTTTT+AGG | - | chr8.1:86504328-86504347 | MS.gene055413:intron | 30.0% |
| ! | TTTTTGTAGAGCATGTGATA+TGG | - | chr8.1:86505953-86505972 | MS.gene055413:intron | 30.0% |
| !! | TTGTAGCTTTAGCAAAATCA+CGG | - | chr8.1:86505058-86505077 | MS.gene055413:intron | 30.0% |
| !!! | ATTTTGTTTTATTGCAGCTG+AGG | - | chr8.1:86505701-86505720 | MS.gene055413:intron | 30.0% |
| !!! | CATGTGTTTGTCATTTTCTA+TGG | + | chr8.1:86505435-86505454 | None:intergenic | 30.0% |
| !!! | GACTAGAGAGGTTTTAAAAA+AGG | - | chr8.1:86508196-86508215 | MS.gene055413:intron | 30.0% |
| !!! | GAGTGCAGAAATTTTTTGTA+GGG | + | chr8.1:86508300-86508319 | None:intergenic | 30.0% |
| !!! | TCCCGGTATGATTTATTTTT+TGG | - | chr8.1:86506818-86506837 | MS.gene055413:CDS | 30.0% |
| !!! | TGAGTGCAGAAATTTTTTGT+AGG | + | chr8.1:86508301-86508320 | None:intergenic | 30.0% |
| !!! | TTTTGCGATATTTTTTTCGG+AGG | + | chr8.1:86508424-86508443 | None:intergenic | 30.0% |
| AAAAGGGAGCTCAAGTATAT+TGG | + | chr8.1:86506228-86506247 | None:intergenic | 35.0% | |
| AACATGCATGTTTGGTATCA+CGG | + | chr8.1:86505091-86505110 | None:intergenic | 35.0% | |
| AACCTTCCATAAAGCCTTAA+GGG | + | chr8.1:86506569-86506588 | None:intergenic | 35.0% | |
| AATCACAGCTCGTAGAAATA+GGG | - | chr8.1:86507826-86507845 | MS.gene055413:intron | 35.0% | |
| AATTGCTTGTGTGGATGTTA+GGG | + | chr8.1:86505241-86505260 | None:intergenic | 35.0% | |
| ACAATGACGTATTAGGATAC+CGG | + | chr8.1:86505213-86505232 | None:intergenic | 35.0% | |
| AGAACTTCGTGGCTTAATAT+CGG | - | chr8.1:86506603-86506622 | MS.gene055413:intron | 35.0% | |
| ATATGTGCATGGTAACTGAT+TGG | + | chr8.1:86506973-86506992 | None:intergenic | 35.0% | |
| ATCAGAATTTGAGCTCTGTA+TGG | + | chr8.1:86504393-86504412 | None:intergenic | 35.0% | |
| ATCCATAAAAAAATCGGGGA+TGG | + | chr8.1:86507576-86507595 | None:intergenic | 35.0% | |
| ATGGCAGCTTATAGTGATTT+CGG | + | chr8.1:86504700-86504719 | None:intergenic | 35.0% | |
| ATGGTAACTGATTGGATCTA+AGG | + | chr8.1:86506965-86506984 | None:intergenic | 35.0% | |
| ATTTCGGTAAACCTACAAAG+TGG | + | chr8.1:86504684-86504703 | None:intergenic | 35.0% | |
| ATTTCTACGAGCTGTGATTA+AGG | + | chr8.1:86507825-86507844 | None:intergenic | 35.0% | |
| CACAAGGATTAGAAACAGAA+GGG | + | chr8.1:86507248-86507267 | None:intergenic | 35.0% | |
| CACATATAGTAGTAAGCCAT+GGG | + | chr8.1:86506502-86506521 | None:intergenic | 35.0% | |
| CAGTGCATAATTTGATTCAG+TGG | - | chr8.1:86504603-86504622 | MS.gene055413:intron | 35.0% | |
| CATATTGTGTATATGGTCTG+TGG | - | chr8.1:86506131-86506150 | MS.gene055413:CDS | 35.0% | |
| CATGTTACCAATTATGCCAA+CGG | + | chr8.1:86504452-86504471 | None:intergenic | 35.0% | |
| CGAATAGAAGTTCCATATGA+TGG | - | chr8.1:86506381-86506400 | MS.gene055413:intron | 35.0% | |
| CTGTGTATCTTATGACAATG+TGG | - | chr8.1:86505517-86505536 | MS.gene055413:intron | 35.0% | |
| GACATAATCTCTTGATATGG+AGG | - | chr8.1:86508158-86508177 | MS.gene055413:intron | 35.0% | |
| GAGCATATGTGGAATTTGTA+TGG | + | chr8.1:86504262-86504281 | None:intergenic | 35.0% | |
| GCATATGTAACATTGAAAGG+TGG | + | chr8.1:86507329-86507348 | None:intergenic | 35.0% | |
| GGCTCAACCAAATTTAACAA+AGG | - | chr8.1:86507859-86507878 | MS.gene055413:intron | 35.0% | |
| GGTATATTTGAAGACTAGAG+AGG | - | chr8.1:86508184-86508203 | MS.gene055413:intron | 35.0% | |
| GTATTATTCATGGAAACCGT+TGG | - | chr8.1:86504433-86504452 | MS.gene055413:intron | 35.0% | |
| TAATCACAGCTCGTAGAAAT+AGG | - | chr8.1:86507825-86507844 | MS.gene055413:intron | 35.0% | |
| TACAGAGCTCAAATTCTGAT+AGG | - | chr8.1:86504393-86504412 | MS.gene055413:intron | 35.0% | |
| TACTTTGTAGAAATCCTTCC+AGG | - | chr8.1:86507020-86507039 | MS.gene055413:intron | 35.0% | |
| TAGGAAAAACAGAGCATATG+TGG | + | chr8.1:86504273-86504292 | None:intergenic | 35.0% | |
| TATAGAGATGATCTGTGCTA+AGG | - | chr8.1:86505583-86505602 | MS.gene055413:intron | 35.0% | |
| TATTGATACGTGTTTGTCAG+GGG | - | chr8.1:86506748-86506767 | MS.gene055413:CDS | 35.0% | |
| TATTTCATCTATCTGGTCCT+CGG | + | chr8.1:86507283-86507302 | None:intergenic | 35.0% | |
| TCACAAGGATTAGAAACAGA+AGG | + | chr8.1:86507249-86507268 | None:intergenic | 35.0% | |
| TCGGCAAAATTAACATCACA+AGG | + | chr8.1:86507264-86507283 | None:intergenic | 35.0% | |
| TGCTTATGTGGATGTTAGAA+GGG | + | chr8.1:86505139-86505158 | None:intergenic | 35.0% | |
| TGGCAATAAATGCAAGGATA+AGG | - | chr8.1:86509326-86509345 | MS.gene055413:intron | 35.0% | |
| TGTATGGTAAACGAGATCTA+AGG | + | chr8.1:86504246-86504265 | None:intergenic | 35.0% | |
| TGTTAACATCACATTCATGC+TGG | - | chr8.1:86507104-86507123 | MS.gene055413:intron | 35.0% | |
| TTAAGGGAGAATTGCTTATG+TGG | + | chr8.1:86505151-86505170 | None:intergenic | 35.0% | |
| TTCTTAGAGTCTTCGTTGAT+GGG | - | chr8.1:86505676-86505695 | MS.gene055413:intron | 35.0% | |
| TTGCTTATGTGGATGTTAGA+AGG | + | chr8.1:86505140-86505159 | None:intergenic | 35.0% | |
| TTTCTTAGAGTCTTCGTTGA+TGG | - | chr8.1:86505675-86505694 | MS.gene055413:intron | 35.0% | |
| ! | AACTACACTTTTAGCCTGTT+TGG | - | chr8.1:86504929-86504948 | MS.gene055413:intron | 35.0% |
| ! | AGAGCATGTGATATGGATTT+TGG | - | chr8.1:86505960-86505979 | MS.gene055413:intron | 35.0% |
| ! | AGGATCCATCAACAGATTTT+AGG | - | chr8.1:86506656-86506675 | MS.gene055413:intron | 35.0% |
| ! | AGTTGATGTGGAGGAAAAAA+AGG | + | chr8.1:86505409-86505428 | None:intergenic | 35.0% |
| ! | CAAGGAACATTTTGCAATCT+AGG | - | chr8.1:86506035-86506054 | MS.gene055413:intron | 35.0% |
| ! | CATAGTTTTTGTTCTTCCCA+TGG | - | chr8.1:86506483-86506502 | MS.gene055413:intron | 35.0% |
| ! | CGTGAAAGTAGTTTGTATGA+GGG | + | chr8.1:86509689-86509708 | None:intergenic | 35.0% |
| ! | TACAAGGTCGCAATTTTGTA+GGG | + | chr8.1:86508240-86508259 | None:intergenic | 35.0% |
| ! | TCGTGAAAGTAGTTTGTATG+AGG | + | chr8.1:86509690-86509709 | None:intergenic | 35.0% |
| ! | TCTTGCTTGTTAACCAACTT+GGG | - | chr8.1:86505632-86505651 | MS.gene055413:intron | 35.0% |
| ! | TTACAAGGTCGCAATTTTGT+AGG | + | chr8.1:86508241-86508260 | None:intergenic | 35.0% |
| ! | TTGAATTTTCAATCCTCAGG+AGG | - | chr8.1:86506335-86506354 | MS.gene055413:CDS | 35.0% |
| ! | TTGTGATGTTAATTTTGCCG+AGG | - | chr8.1:86507263-86507282 | MS.gene055413:CDS | 35.0% |
| ! | TTTTGTGCGATTTCTCCTTT+CGG | + | chr8.1:86508124-86508143 | None:intergenic | 35.0% |
| !! | AAAAGCTACACTTTTTAGCC+TGG | - | chr8.1:86504512-86504531 | MS.gene055413:intron | 35.0% |
| !! | AAAGTGGATGTTTGTTTTCG+CGG | + | chr8.1:86504668-86504687 | None:intergenic | 35.0% |
| !! | TACAGTCTTTTTAAGCAACG+TGG | - | chr8.1:86506444-86506463 | MS.gene055413:intron | 35.0% |
| !! | TTTCTATGGTAGAGTTGATG+TGG | + | chr8.1:86505421-86505440 | None:intergenic | 35.0% |
| !!! | TTTTGATTTAACTCTAGCCC+AGG | - | chr8.1:86505806-86505825 | MS.gene055413:intron | 35.0% |
| AAGAGAATCACCATGACAGT+CGG | + | chr8.1:86508814-86508833 | None:intergenic | 40.0% | |
| AATCCTTCCAGGATCTGTTA+TGG | - | chr8.1:86507031-86507050 | MS.gene055413:intron | 40.0% | |
| AATCTCTTGATATGGAGGGA+AGG | - | chr8.1:86508163-86508182 | MS.gene055413:intron | 40.0% | |
| ACGACAGCTTTACCAGAATA+AGG | - | chr8.1:86504882-86504901 | MS.gene055413:intron | 40.0% | |
| AGACGACCATATATAGGAGA+GGG | + | chr8.1:86505114-86505133 | None:intergenic | 40.0% | |
| AGAGAGATGAGAGATTGTCT+TGG | - | chr8.1:86509487-86509506 | MS.gene055413:intron | 40.0% | |
| AGCTTTACCAGAATAAGGGT+GGG | - | chr8.1:86504887-86504906 | MS.gene055413:intron | 40.0% | |
| ATCGCAGGGAAAAACTAGAA+TGG | + | chr8.1:86505385-86505404 | None:intergenic | 40.0% | |
| ATGGAAACCGTTGGCATAAT+TGG | - | chr8.1:86504442-86504461 | MS.gene055413:intron | 40.0% | |
| ATTGCTTGTGTGGATGTTAG+GGG | + | chr8.1:86505240-86505259 | None:intergenic | 40.0% | |
| CAACCTTCCATAAAGCCTTA+AGG | + | chr8.1:86506570-86506589 | None:intergenic | 40.0% | |
| CAATGACGTATTAGGATACC+GGG | + | chr8.1:86505212-86505231 | None:intergenic | 40.0% | |
| CAATTGCTTGTGTGGATGTT+AGG | + | chr8.1:86505242-86505261 | None:intergenic | 40.0% | |
| CAATTTGCCTCCCCTATATA+CGG | - | chr8.1:86504745-86504764 | MS.gene055413:intron | 40.0% | |
| CATGTTCCCTCTCCTATATA+TGG | - | chr8.1:86505105-86505124 | MS.gene055413:intron | 40.0% | |
| CGACAGCTTTACCAGAATAA+GGG | - | chr8.1:86504883-86504902 | MS.gene055413:intron | 40.0% | |
| GCACATATAGTAGTAAGCCA+TGG | + | chr8.1:86506503-86506522 | None:intergenic | 40.0% | |
| GCTTATGTGGATGTTAGAAG+GGG | + | chr8.1:86505138-86505157 | None:intergenic | 40.0% | |
| GGATAGACAACCGTATATAG+GGG | + | chr8.1:86504758-86504777 | None:intergenic | 40.0% | |
| GGGATAGACAACCGTATATA+GGG | + | chr8.1:86504759-86504778 | None:intergenic | 40.0% | |
| GGGATAGACAATGACGTATT+AGG | + | chr8.1:86505220-86505239 | None:intergenic | 40.0% | |
| GTGCTGAGTAGCAAAGTTAA+GGG | + | chr8.1:86505167-86505186 | None:intergenic | 40.0% | |
| GTTCTTTGCTAGGAATTTCC+CGG | - | chr8.1:86506801-86506820 | MS.gene055413:CDS | 40.0% | |
| TAAAGTGAGACAAGACTGTC+AGG | + | chr8.1:86505318-86505337 | None:intergenic | 40.0% | |
| TAAGCCACGAAGTTCTTCTT+CGG | + | chr8.1:86506599-86506618 | None:intergenic | 40.0% | |
| TAGACGACCATATATAGGAG+AGG | + | chr8.1:86505115-86505134 | None:intergenic | 40.0% | |
| TCAGCACCTTTATTGGGTTT+AGG | - | chr8.1:86505180-86505199 | MS.gene055413:intron | 40.0% | |
| TGCTACTCAGCACCTTTATT+GGG | - | chr8.1:86505174-86505193 | MS.gene055413:intron | 40.0% | |
| TGTGATGTTAACACCAGCAA+CGG | + | chr8.1:86507097-86507116 | None:intergenic | 40.0% | |
| TTCGAGCCTAAACCCAATAA+AGG | + | chr8.1:86505189-86505208 | None:intergenic | 40.0% | |
| TTCGAGCCTAAGCTGAATAA+AGG | + | chr8.1:86504829-86504848 | None:intergenic | 40.0% | |
| TTCGAGCCTAAGGCTAATAA+AGG | + | chr8.1:86505288-86505307 | None:intergenic | 40.0% | |
| TTGACGAACCAATGCAAGTT+AGG | + | chr8.1:86504197-86504216 | None:intergenic | 40.0% | |
| TTGCTACTCAGCACCTTTAT+TGG | - | chr8.1:86505173-86505192 | MS.gene055413:intron | 40.0% | |
| ! | CACTTTTAGCCTGTTTGGTT+TGG | - | chr8.1:86504934-86504953 | MS.gene055413:intron | 40.0% |
| ! | CAGAAGTAAAGTACTCTGCA+TGG | - | chr8.1:86508773-86508792 | MS.gene055413:intron | 40.0% |
| ! | CATCGTCTACACTGATTACA+AGG | - | chr8.1:86506017-86506036 | MS.gene055413:intron | 40.0% |
| ! | CGTTGGCATAATTGGTAACA+TGG | - | chr8.1:86504450-86504469 | MS.gene055413:intron | 40.0% |
| ! | CTCTTGCTTGTTAACCAACT+TGG | - | chr8.1:86505631-86505650 | MS.gene055413:intron | 40.0% |
| ! | GTTTGTTAAAAAGGGCCGAA+AGG | - | chr8.1:86508106-86508125 | MS.gene055413:CDS | 40.0% |
| ! | TACTCTGCATGGCATTTTAG+TGG | - | chr8.1:86508784-86508803 | MS.gene055413:intron | 40.0% |
| ! | TGGCATAATTGGTAACATGG+CGG | - | chr8.1:86504453-86504472 | MS.gene055413:intron | 40.0% |
| !! | ACTCTGCATGGCATTTTAGT+GGG | - | chr8.1:86508785-86508804 | MS.gene055413:intron | 40.0% |
| !! | ACTTTTTAGCCTGGTTGGTT+TGG | - | chr8.1:86504521-86504540 | MS.gene055413:intron | 40.0% |
| !! | GCATATGTTTGCTATTGCAG+TGG | + | chr8.1:86505037-86505056 | None:intergenic | 40.0% |
| !! | GCTAATAAAGGTGCTGAGTA+CGG | + | chr8.1:86505276-86505295 | None:intergenic | 40.0% |
| !! | TAGCTTTAGCAAAATCACGG+TGG | - | chr8.1:86505061-86505080 | MS.gene055413:intron | 40.0% |
| !! | TCAGCACCTTTATTAGCCTT+AGG | - | chr8.1:86505279-86505298 | MS.gene055413:intron | 40.0% |
| !!! | CTCCATCCCCGATTTTTTTA+TGG | - | chr8.1:86507571-86507590 | MS.gene055413:intron | 40.0% |
| !!! | GGGTGGTGGTTTTATTTCTT+TGG | - | chr8.1:86506768-86506787 | MS.gene055413:CDS | 40.0% |
| !!! | TTTTAGCCTGTTTGGTTTGG+TGG | - | chr8.1:86504937-86504956 | MS.gene055413:intron | 40.0% |
| AAAAATCGGGGATGGAGTTC+AGG | + | chr8.1:86507568-86507587 | None:intergenic | 45.0% | |
| AAGCCACGAAGTTCTTCTTC+GGG | + | chr8.1:86506598-86506617 | None:intergenic | 45.0% | |
| ACATAGACCCATCCTGATTC+TGG | + | chr8.1:86504484-86504503 | None:intergenic | 45.0% | |
| AGGCAAATTGGTATCATGGC+GGG | + | chr8.1:86504735-86504754 | None:intergenic | 45.0% | |
| AGGGGTAGACGACCATATAT+AGG | + | chr8.1:86505120-86505139 | None:intergenic | 45.0% | |
| CAGATGCTTGATCTTGAAGC+AGG | - | chr8.1:86507129-86507148 | MS.gene055413:intron | 45.0% | |
| CAGCTTTACCAGAATAAGGG+TGG | - | chr8.1:86504886-86504905 | MS.gene055413:intron | 45.0% | |
| CATATTACAGGAGGCCCTTA+AGG | - | chr8.1:86506552-86506571 | MS.gene055413:intron | 45.0% | |
| CGACTGACGTGACAAAATAG+TGG | - | chr8.1:86508010-86508029 | MS.gene055413:intron | 45.0% | |
| CGTATATAGGGGAGGCAAAT+TGG | + | chr8.1:86504747-86504766 | None:intergenic | 45.0% | |
| CTGCATAGCTTTCAAGCTGA+TGG | - | chr8.1:86507747-86507766 | MS.gene055413:intron | 45.0% | |
| CTGGTAAAGCTGTCGTGATA+CGG | + | chr8.1:86504878-86504897 | None:intergenic | 45.0% | |
| CTGGTATCCTAACACATGCT+GGG | - | chr8.1:86504850-86504869 | MS.gene055413:intron | 45.0% | |
| CTTAATATCGGAGCAGTGGA+AGG | - | chr8.1:86506615-86506634 | MS.gene055413:intron | 45.0% | |
| CTTCCATAACAGATCCTGGA+AGG | + | chr8.1:86507037-86507056 | None:intergenic | 45.0% | |
| GAGATGAGAGATTGTCTTGG+AGG | - | chr8.1:86509490-86509509 | MS.gene055413:intron | 45.0% | |
| GAGGCAAATTGGTATCATGG+CGG | + | chr8.1:86504736-86504755 | None:intergenic | 45.0% | |
| GGGGATAGACAACCGTATAT+AGG | + | chr8.1:86504760-86504779 | None:intergenic | 45.0% | |
| GTGCTGAGTACGGAATTTAG+GGG | + | chr8.1:86505266-86505285 | None:intergenic | 45.0% | |
| TAGACAACCGTATATAGGGG+AGG | + | chr8.1:86504755-86504774 | None:intergenic | 45.0% | |
| TCCAGGATCTGTTATGGAAG+CGG | - | chr8.1:86507037-86507056 | MS.gene055413:intron | 45.0% | |
| TCGGCACCTTTATTCAGCTT+AGG | - | chr8.1:86504820-86504839 | MS.gene055413:intron | 45.0% | |
| TGCAGCTTCTGTCAAACATG+TGG | - | chr8.1:86504999-86505018 | MS.gene055413:intron | 45.0% | |
| TTAACACCAGCAACGGCAAA+CGG | + | chr8.1:86507090-86507109 | None:intergenic | 45.0% | |
| TTAGGGGACAATTGCTTGTG+TGG | + | chr8.1:86505250-86505269 | None:intergenic | 45.0% | |
| TTCTATGCGTGCCTCATACA+TGG | - | chr8.1:86507783-86507802 | MS.gene055413:intron | 45.0% | |
| TTTCCCGAAGAAGAACTTCG+TGG | - | chr8.1:86506592-86506611 | MS.gene055413:intron | 45.0% | |
| ! | GGCATAATTGGTAACATGGC+GGG | - | chr8.1:86504454-86504473 | MS.gene055413:intron | 45.0% |
| ! | GGTGCTGAGTACGGAATTTA+GGG | + | chr8.1:86505267-86505286 | None:intergenic | 45.0% |
| ! | GGTGCTGAGTAGCAAAGTTA+AGG | + | chr8.1:86505168-86505187 | None:intergenic | 45.0% |
| ! | TCAAGCTGATGGATCACCAA+TGG | - | chr8.1:86507758-86507777 | MS.gene055413:intron | 45.0% |
| ! | TGGTTCTATAGTTGAGCACC+AGG | - | chr8.1:86506401-86506420 | MS.gene055413:intron | 45.0% |
| !! | AGGTGCTGAGTACGGAATTT+AGG | + | chr8.1:86505268-86505287 | None:intergenic | 45.0% |
| !! | ATTAGCCTTAGGCTCGAACT+CGG | - | chr8.1:86505290-86505309 | MS.gene055413:intron | 45.0% |
| !! | CTATGGTAGAGTTGATGTGG+AGG | + | chr8.1:86505418-86505437 | None:intergenic | 45.0% |
| !! | GAGGAAAAAAAGGCATCGCA+GGG | + | chr8.1:86505399-86505418 | None:intergenic | 45.0% |
| !! | GCTACACTTTTTAGCCTGGT+TGG | - | chr8.1:86504516-86504535 | MS.gene055413:intron | 45.0% |
| !! | GTTATAAGAGGGTGTTGACG+TGG | + | chr8.1:86507966-86507985 | None:intergenic | 45.0% |
| !! | TGATCTTGGCGTTGATTCGA+TGG | + | chr8.1:86507392-86507411 | None:intergenic | 45.0% |
| !! | TGGCGGGTTTGTGAAAATCA+TGG | + | chr8.1:86504719-86504738 | None:intergenic | 45.0% |
| !!! | TTTTAGCCTGGTTGGTTTGG+AGG | - | chr8.1:86504524-86504543 | MS.gene055413:intron | 45.0% |
| !! | AACAATAATAATAAATTATT+AGG | + | chr8.1:86504292-86504311 | None:intergenic | 5.0% |
| ACAGAGAAGAGATAGCGACG+CGG | - | chr8.1:86505776-86505795 | MS.gene055413:intron | 50.0% | |
| ACAGTGACCCACCCTTATTC+TGG | + | chr8.1:86504897-86504916 | None:intergenic | 50.0% | |
| AGCAGTGGAAGGAAATGGGT+TGG | - | chr8.1:86506626-86506645 | MS.gene055413:intron | 50.0% | |
| AGGAGGCCCTTAAGGCTTTA+TGG | - | chr8.1:86506560-86506579 | MS.gene055413:intron | 50.0% | |
| AGGCACGCATAGAAAGCCAT+TGG | + | chr8.1:86507777-86507796 | None:intergenic | 50.0% | |
| ATCGGAGCAGTGGAAGGAAA+TGG | - | chr8.1:86506621-86506640 | MS.gene055413:intron | 50.0% | |
| ATTCAGCTTAGGCTCGAACC+TGG | - | chr8.1:86504831-86504850 | MS.gene055413:intron | 50.0% | |
| ATTGGGTTTAGGCTCGAACC+CGG | - | chr8.1:86505191-86505210 | MS.gene055413:intron | 50.0% | |
| CCAGCATGTGTTAGGATACC+AGG | + | chr8.1:86504852-86504871 | None:intergenic | 50.0% | |
| CCAGGATCTGTTATGGAAGC+GGG | - | chr8.1:86507038-86507057 | MS.gene055413:intron | 50.0% | |
| CCTGGTATCCTAACACATGC+TGG | - | chr8.1:86504849-86504868 | MS.gene055413:intron | 50.0% | |
| GATCTGTTATGGAAGCGGGA+AGG | - | chr8.1:86507042-86507061 | MS.gene055413:intron | 50.0% | |
| GGAGAGGGAACATGCATGTT+TGG | + | chr8.1:86505099-86505118 | None:intergenic | 50.0% | |
| GGGGAGGCAAATTGGTATCA+TGG | + | chr8.1:86504739-86504758 | None:intergenic | 50.0% | |
| GGGTTTGCCAGAATCAGGAT+GGG | - | chr8.1:86504474-86504493 | MS.gene055413:intron | 50.0% | |
| GTGGCTTAATATCGGAGCAG+TGG | - | chr8.1:86506611-86506630 | MS.gene055413:intron | 50.0% | |
| TAACACCAGCAACGGCAAAC+GGG | + | chr8.1:86507089-86507108 | None:intergenic | 50.0% | |
| TACAGTCAAGCCACGCACAT+TGG | - | chr8.1:86507508-86507527 | MS.gene055413:CDS | 50.0% | |
| TACGGTACCCAGCATGTGTT+AGG | + | chr8.1:86504860-86504879 | None:intergenic | 50.0% | |
| TCGGAGCAGTGGAAGGAAAT+GGG | - | chr8.1:86506622-86506641 | MS.gene055413:intron | 50.0% | |
| TGATACGTGTTTGTCAGGGG+TGG | - | chr8.1:86506751-86506770 | MS.gene055413:CDS | 50.0% | |
| ! | GGCCCTTAAGGCTTTATGGA+AGG | - | chr8.1:86506564-86506583 | MS.gene055413:intron | 50.0% |
| ! | TAGTGGGTAACCGACTGTCA+TGG | - | chr8.1:86508801-86508820 | MS.gene055413:intron | 50.0% |
| !! | AGCCTGTTTGGTTTGGTGGT+GGG | - | chr8.1:86504941-86504960 | MS.gene055413:intron | 50.0% |
| !! | CTGAATAAAGGTGCCGAGTC+GGG | + | chr8.1:86504817-86504836 | None:intergenic | 50.0% |
| !! | GCTGAATAAAGGTGCCGAGT+CGG | + | chr8.1:86504818-86504837 | None:intergenic | 50.0% |
| !! | GGAAGGAAATGGGTTGGCAA+GGG | - | chr8.1:86506632-86506651 | MS.gene055413:intron | 50.0% |
| !! | GGAGGAAAAAAAGGCATCGC+AGG | + | chr8.1:86505400-86505419 | None:intergenic | 50.0% |
| !! | TAGCCTGTTTGGTTTGGTGG+TGG | - | chr8.1:86504940-86504959 | MS.gene055413:intron | 50.0% |
| !! | TGGAAGGAAATGGGTTGGCA+AGG | - | chr8.1:86506631-86506650 | MS.gene055413:intron | 50.0% |
| ACGTGACCTCCAAACCAACC+AGG | + | chr8.1:86504533-86504552 | None:intergenic | 55.0% | |
| AGTCAAGCCACGCACATTGG+TGG | - | chr8.1:86507511-86507530 | MS.gene055413:CDS | 55.0% | |
| ATTGCAGCTGAGGCTGTTGC+AGG | - | chr8.1:86505711-86505730 | MS.gene055413:intron | 55.0% | |
| CAGAGAAGAGATAGCGACGC+GGG | - | chr8.1:86505777-86505796 | MS.gene055413:intron | 55.0% | |
| CCCGCTTCCATAACAGATCC+TGG | + | chr8.1:86507041-86507060 | None:intergenic | 55.0% | |
| CGGGTTTGCCAGAATCAGGA+TGG | - | chr8.1:86504473-86504492 | MS.gene055413:intron | 55.0% | |
| CTCCCACCACCAAACCAAAC+AGG | + | chr8.1:86504946-86504965 | None:intergenic | 55.0% | |
| CTGTTGCAGGATCAGCAGCA+TGG | - | chr8.1:86505724-86505743 | MS.gene055413:intron | 55.0% | |
| GGAAGGAGATCGTTCCGTGT+GGG | - | chr8.1:86507059-86507078 | MS.gene055413:intron | 55.0% | |
| GTCAAGCCACGCACATTGGT+GGG | - | chr8.1:86507512-86507531 | MS.gene055413:CDS | 55.0% | |
| TACGTGTTTGTCAGGGGTGG+TGG | - | chr8.1:86506754-86506773 | MS.gene055413:CDS | 55.0% | |
| TCTCCCTTAACCTCCCGACT+CGG | - | chr8.1:86504801-86504820 | MS.gene055413:intron | 55.0% | |
| !! | AATAAAGGTGCCGAGTCGGG+AGG | + | chr8.1:86504814-86504833 | None:intergenic | 55.0% |
| !! | AGGTACCGAGTTCGAGCCTA+AGG | + | chr8.1:86505298-86505317 | None:intergenic | 55.0% |
| !! | ATGGCGGGTTTGCCAGAATC+AGG | - | chr8.1:86504469-86504488 | MS.gene055413:intron | 55.0% |
| !! | CAATCCTCAGGAGGAGTGCT+TGG | - | chr8.1:86506344-86506363 | MS.gene055413:CDS | 55.0% |
| !! | GGAAATGGGTTGGCAAGGGA+AGG | - | chr8.1:86506636-86506655 | MS.gene055413:intron | 55.0% |
| !! | TCAGCAGCATGGCTTGGTAG+AGG | - | chr8.1:86505735-86505754 | MS.gene055413:intron | 55.0% |
| CTCTCCAAGCACTCCTCCTG+AGG | + | chr8.1:86506351-86506370 | None:intergenic | 60.0% | |
| GAGTACCCGTTTGCCGTTGC+TGG | - | chr8.1:86507081-86507100 | MS.gene055413:CDS | 60.0% | |
| GCAGGATCAGCAGCATGGCT+TGG | - | chr8.1:86505729-86505748 | MS.gene055413:intron | 60.0% | |
| GGCAAACGGGTACTCCCACA+CGG | + | chr8.1:86507076-86507095 | None:intergenic | 60.0% | |
| GGGAAGGAGATCGTTCCGTG+TGG | - | chr8.1:86507058-86507077 | MS.gene055413:intron | 60.0% | |
| GTGCCGAGTCGGGAGGTTAA+GGG | + | chr8.1:86504807-86504826 | None:intergenic | 60.0% | |
| GTTGCTCCCACCAATGTGCG+TGG | + | chr8.1:86507521-86507540 | None:intergenic | 60.0% | |
| !! | CTCAGGAGGAGTGCTTGGAG+AGG | - | chr8.1:86506349-86506368 | MS.gene055413:CDS | 60.0% |
| ! | GGTGCCGAGTCGGGAGGTTA+AGG | + | chr8.1:86504808-86504827 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 86504177 | 86509712 | 86504177 | ID=MS.gene055413 |
| chr8.1 | mRNA | 86504177 | 86509712 | 86504177 | ID=MS.gene055413.t1;Parent=MS.gene055413 |
| chr8.1 | exon | 86509682 | 86509712 | 86509682 | ID=MS.gene055413.t1.exon1;Parent=MS.gene055413.t1 |
| chr8.1 | CDS | 86509682 | 86509712 | 86509682 | ID=cds.MS.gene055413.t1;Parent=MS.gene055413.t1 |
| chr8.1 | exon | 86508062 | 86508171 | 86508062 | ID=MS.gene055413.t1.exon2;Parent=MS.gene055413.t1 |
| chr8.1 | CDS | 86508062 | 86508171 | 86508062 | ID=cds.MS.gene055413.t1;Parent=MS.gene055413.t1 |
| chr8.1 | exon | 86507467 | 86507535 | 86507467 | ID=MS.gene055413.t1.exon3;Parent=MS.gene055413.t1 |
| chr8.1 | CDS | 86507467 | 86507535 | 86507467 | ID=cds.MS.gene055413.t1;Parent=MS.gene055413.t1 |
| chr8.1 | exon | 86507212 | 86507327 | 86507212 | ID=MS.gene055413.t1.exon4;Parent=MS.gene055413.t1 |
| chr8.1 | CDS | 86507212 | 86507327 | 86507212 | ID=cds.MS.gene055413.t1;Parent=MS.gene055413.t1 |
| chr8.1 | exon | 86507067 | 86507121 | 86507067 | ID=MS.gene055413.t1.exon5;Parent=MS.gene055413.t1 |
| chr8.1 | CDS | 86507067 | 86507121 | 86507067 | ID=cds.MS.gene055413.t1;Parent=MS.gene055413.t1 |
| chr8.1 | exon | 86506739 | 86506859 | 86506739 | ID=MS.gene055413.t1.exon6;Parent=MS.gene055413.t1 |
| chr8.1 | CDS | 86506739 | 86506859 | 86506739 | ID=cds.MS.gene055413.t1;Parent=MS.gene055413.t1 |
| chr8.1 | exon | 86506329 | 86506376 | 86506329 | ID=MS.gene055413.t1.exon7;Parent=MS.gene055413.t1 |
| chr8.1 | CDS | 86506329 | 86506376 | 86506329 | ID=cds.MS.gene055413.t1;Parent=MS.gene055413.t1 |
| chr8.1 | exon | 86506076 | 86506170 | 86506076 | ID=MS.gene055413.t1.exon8;Parent=MS.gene055413.t1 |
| chr8.1 | CDS | 86506076 | 86506170 | 86506076 | ID=cds.MS.gene055413.t1;Parent=MS.gene055413.t1 |
| chr8.1 | exon | 86504177 | 86504275 | 86504177 | ID=MS.gene055413.t1.exon9;Parent=MS.gene055413.t1 |
| chr8.1 | CDS | 86504177 | 86504275 | 86504177 | ID=cds.MS.gene055413.t1;Parent=MS.gene055413.t1 |
| Gene Sequence |
| Protein sequence |
