Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70819.t1 | XP_013468987.1 | 98.9 | 379 | 4 | 0 | 1 | 379 | 1 | 379 | 2.90E-222 | 780.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70819.t1 | Q93VR3 | 91.0 | 377 | 34 | 0 | 1 | 377 | 1 | 377 | 1.7e-207 | 723.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70819.t1 | A0A072VNM9 | 98.9 | 379 | 4 | 0 | 1 | 379 | 37 | 415 | 2.1e-222 | 780.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049151 | MS.gene70819 | 0.83173 | 1.41E-55 | -1.69E-46 |
| MS.gene04915 | MS.gene70819 | 0.808096 | 3.66E-50 | -1.69E-46 |
| MS.gene049178 | MS.gene70819 | 0.805685 | 1.18E-49 | -1.69E-46 |
| MS.gene04917 | MS.gene70819 | 0.802029 | 6.81E-49 | -1.69E-46 |
| MS.gene049297 | MS.gene70819 | 0.847874 | 8.77E-60 | -1.69E-46 |
| MS.gene049322 | MS.gene70819 | 0.800915 | 1.15E-48 | -1.69E-46 |
| MS.gene049378 | MS.gene70819 | 0.85135 | 9.40E-61 | -1.69E-46 |
| MS.gene049382 | MS.gene70819 | 0.835181 | 1.95E-56 | -1.69E-46 |
| MS.gene049599 | MS.gene70819 | -0.829392 | 5.28E-55 | -1.69E-46 |
| MS.gene049629 | MS.gene70819 | 0.804054 | 2.60E-49 | -1.69E-46 |
| MS.gene049758 | MS.gene70819 | 0.889202 | 2.99E-73 | -1.69E-46 |
| MS.gene04984 | MS.gene70819 | 0.854979 | 8.58E-62 | -1.69E-46 |
| MS.gene049910 | MS.gene70819 | 0.833989 | 3.88E-56 | -1.69E-46 |
| MS.gene049915 | MS.gene70819 | 0.824103 | 9.68E-54 | -1.69E-46 |
| MS.gene050226 | MS.gene70819 | 0.880408 | 5.63E-70 | -1.69E-46 |
| MS.gene050227 | MS.gene70819 | 0.872316 | 3.49E-67 | -1.69E-46 |
| MS.gene050228 | MS.gene70819 | 0.870161 | 1.80E-66 | -1.69E-46 |
| MS.gene050301 | MS.gene70819 | 0.831613 | 1.51E-55 | -1.69E-46 |
| MS.gene050330 | MS.gene70819 | -0.841146 | 5.67E-58 | -1.69E-46 |
| MS.gene050438 | MS.gene70819 | 0.803675 | 3.11E-49 | -1.69E-46 |
| MS.gene050442 | MS.gene70819 | 0.810361 | 1.20E-50 | -1.69E-46 |
| MS.gene050558 | MS.gene70819 | 0.838976 | 2.09E-57 | -1.69E-46 |
| MS.gene050586 | MS.gene70819 | 0.812268 | 4.62E-51 | -1.69E-46 |
| MS.gene050623 | MS.gene70819 | -0.863248 | 2.85E-64 | -1.69E-46 |
| MS.gene050629 | MS.gene70819 | -0.856702 | 2.69E-62 | -1.69E-46 |
| MS.gene050642 | MS.gene70819 | 0.843882 | 1.07E-58 | -1.69E-46 |
| MS.gene050719 | MS.gene70819 | 0.80517 | 1.52E-49 | -1.69E-46 |
| MS.gene050721 | MS.gene70819 | 0.805414 | 1.35E-49 | -1.69E-46 |
| MS.gene050724 | MS.gene70819 | 0.805908 | 1.06E-49 | -1.69E-46 |
| MS.gene050762 | MS.gene70819 | 0.903755 | 2.50E-79 | -1.69E-46 |
| MS.gene050763 | MS.gene70819 | 0.904204 | 1.57E-79 | -1.69E-46 |
| MS.gene050787 | MS.gene70819 | 0.812152 | 4.89E-51 | -1.69E-46 |
| MS.gene050807 | MS.gene70819 | 0.846563 | 2.01E-59 | -1.69E-46 |
| MS.gene050815 | MS.gene70819 | 0.816036 | 6.80E-52 | -1.69E-46 |
| MS.gene050824 | MS.gene70819 | 0.800656 | 1.30E-48 | -1.69E-46 |
| MS.gene050987 | MS.gene70819 | 0.817899 | 2.60E-52 | -1.69E-46 |
| MS.gene05119 | MS.gene70819 | -0.850603 | 1.53E-60 | -1.69E-46 |
| MS.gene051257 | MS.gene70819 | 0.806303 | 8.78E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene70819 | 0.835777 | 1.38E-56 | -1.69E-46 |
| MS.gene051577 | MS.gene70819 | 0.808984 | 2.37E-50 | -1.69E-46 |
| MS.gene051626 | MS.gene70819 | 0.800303 | 1.54E-48 | -1.69E-46 |
| MS.gene051662 | MS.gene70819 | 0.857288 | 1.81E-62 | -1.69E-46 |
| MS.gene051663 | MS.gene70819 | 0.874945 | 4.54E-68 | -1.69E-46 |
| MS.gene051860 | MS.gene70819 | 0.850012 | 2.24E-60 | -1.69E-46 |
| MS.gene051983 | MS.gene70819 | 0.814409 | 1.56E-51 | -1.69E-46 |
| MS.gene052077 | MS.gene70819 | 0.817169 | 3.79E-52 | -1.69E-46 |
| MS.gene052115 | MS.gene70819 | 0.846885 | 1.64E-59 | -1.69E-46 |
| MS.gene052176 | MS.gene70819 | 0.836529 | 8.87E-57 | -1.69E-46 |
| MS.gene052207 | MS.gene70819 | 0.801132 | 1.04E-48 | -1.69E-46 |
| MS.gene052256 | MS.gene70819 | 0.822913 | 1.84E-53 | -1.69E-46 |
| MS.gene052302 | MS.gene70819 | 0.859219 | 4.81E-63 | -1.69E-46 |
| MS.gene052309 | MS.gene70819 | -0.816634 | 5.00E-52 | -1.69E-46 |
| MS.gene052376 | MS.gene70819 | 0.86549 | 5.69E-65 | -1.69E-46 |
| MS.gene052389 | MS.gene70819 | 0.804358 | 2.24E-49 | -1.69E-46 |
| MS.gene052600 | MS.gene70819 | 0.801895 | 7.26E-49 | -1.69E-46 |
| MS.gene052665 | MS.gene70819 | 0.843835 | 1.10E-58 | -1.69E-46 |
| MS.gene052856 | MS.gene70819 | 0.871763 | 5.33E-67 | -1.69E-46 |
| MS.gene052858 | MS.gene70819 | 0.855688 | 5.33E-62 | -1.69E-46 |
| MS.gene052860 | MS.gene70819 | 0.851036 | 1.15E-60 | -1.69E-46 |
| MS.gene052896 | MS.gene70819 | 0.801651 | 8.14E-49 | -1.69E-46 |
| MS.gene052970 | MS.gene70819 | -0.820021 | 8.55E-53 | -1.69E-46 |
| MS.gene053184 | MS.gene70819 | 0.819247 | 1.28E-52 | -1.69E-46 |
| MS.gene053216 | MS.gene70819 | 0.811797 | 5.85E-51 | -1.69E-46 |
| MS.gene053437 | MS.gene70819 | 0.81421 | 1.73E-51 | -1.69E-46 |
| MS.gene053559 | MS.gene70819 | 0.811984 | 5.32E-51 | -1.69E-46 |
| MS.gene053577 | MS.gene70819 | 0.818073 | 2.37E-52 | -1.69E-46 |
| MS.gene053630 | MS.gene70819 | 0.822663 | 2.10E-53 | -1.69E-46 |
| MS.gene053836 | MS.gene70819 | 0.897559 | 1.25E-76 | -1.69E-46 |
| MS.gene053927 | MS.gene70819 | 0.814614 | 1.41E-51 | -1.69E-46 |
| MS.gene054184 | MS.gene70819 | 0.810295 | 1.24E-50 | -1.69E-46 |
| MS.gene054185 | MS.gene70819 | 0.816377 | 5.71E-52 | -1.69E-46 |
| MS.gene054379 | MS.gene70819 | 0.909105 | 8.22E-82 | -1.69E-46 |
| MS.gene054468 | MS.gene70819 | 0.812868 | 3.41E-51 | -1.69E-46 |
| MS.gene054472 | MS.gene70819 | 0.8021 | 6.58E-49 | -1.69E-46 |
| MS.gene054473 | MS.gene70819 | 0.862546 | 4.69E-64 | -1.69E-46 |
| MS.gene054542 | MS.gene70819 | 0.850089 | 2.13E-60 | -1.69E-46 |
| MS.gene054667 | MS.gene70819 | 0.832935 | 7.12E-56 | -1.69E-46 |
| MS.gene054930 | MS.gene70819 | 0.883762 | 3.41E-71 | -1.69E-46 |
| MS.gene054942 | MS.gene70819 | 0.859358 | 4.37E-63 | -1.69E-46 |
| MS.gene054983 | MS.gene70819 | 0.81791 | 2.58E-52 | -1.69E-46 |
| MS.gene055277 | MS.gene70819 | 0.811823 | 5.77E-51 | -1.69E-46 |
| MS.gene055413 | MS.gene70819 | 0.805741 | 1.15E-49 | -1.69E-46 |
| MS.gene055422 | MS.gene70819 | 0.838286 | 3.15E-57 | -1.69E-46 |
| MS.gene055428 | MS.gene70819 | 0.843772 | 1.14E-58 | -1.69E-46 |
| MS.gene055441 | MS.gene70819 | 0.827219 | 1.77E-54 | -1.69E-46 |
| MS.gene055816 | MS.gene70819 | -0.851183 | 1.05E-60 | -1.69E-46 |
| MS.gene055859 | MS.gene70819 | 0.810677 | 1.02E-50 | -1.69E-46 |
| MS.gene056069 | MS.gene70819 | -0.841936 | 3.51E-58 | -1.69E-46 |
| MS.gene056314 | MS.gene70819 | 0.801721 | 7.88E-49 | -1.69E-46 |
| MS.gene056400 | MS.gene70819 | 0.834836 | 2.38E-56 | -1.69E-46 |
| MS.gene056552 | MS.gene70819 | 0.809979 | 1.45E-50 | -1.69E-46 |
| MS.gene056589 | MS.gene70819 | 0.80146 | 8.91E-49 | -1.69E-46 |
| MS.gene056760 | MS.gene70819 | 0.81027 | 1.25E-50 | -1.69E-46 |
| MS.gene056875 | MS.gene70819 | 0.858088 | 1.05E-62 | -1.69E-46 |
| MS.gene056979 | MS.gene70819 | 0.811978 | 5.34E-51 | -1.69E-46 |
| MS.gene057121 | MS.gene70819 | 0.814671 | 1.37E-51 | -1.69E-46 |
| MS.gene057245 | MS.gene70819 | 0.807447 | 5.03E-50 | -1.69E-46 |
| MS.gene057260 | MS.gene70819 | 0.824869 | 6.39E-54 | -1.69E-46 |
| MS.gene057439 | MS.gene70819 | 0.800884 | 1.17E-48 | -1.69E-46 |
| MS.gene057448 | MS.gene70819 | 0.800542 | 1.37E-48 | -1.69E-46 |
| MS.gene057450 | MS.gene70819 | 0.807354 | 5.27E-50 | -1.69E-46 |
| MS.gene057469 | MS.gene70819 | 0.833308 | 5.75E-56 | -1.69E-46 |
| MS.gene05761 | MS.gene70819 | 0.81249 | 4.13E-51 | -1.69E-46 |
| MS.gene057665 | MS.gene70819 | 0.847772 | 9.36E-60 | -1.69E-46 |
| MS.gene057750 | MS.gene70819 | 0.828144 | 1.06E-54 | -1.69E-46 |
| MS.gene057754 | MS.gene70819 | 0.827145 | 1.84E-54 | -1.69E-46 |
| MS.gene057929 | MS.gene70819 | 0.806966 | 6.36E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene70819 | 0.828532 | 8.53E-55 | -1.69E-46 |
| MS.gene05811 | MS.gene70819 | 0.843196 | 1.63E-58 | -1.69E-46 |
| MS.gene058168 | MS.gene70819 | 0.804457 | 2.14E-49 | -1.69E-46 |
| MS.gene058182 | MS.gene70819 | 0.869911 | 2.17E-66 | -1.69E-46 |
| MS.gene058236 | MS.gene70819 | 0.80938 | 1.95E-50 | -1.69E-46 |
| MS.gene058399 | MS.gene70819 | 0.811944 | 5.43E-51 | -1.69E-46 |
| MS.gene058435 | MS.gene70819 | 0.809384 | 1.94E-50 | -1.69E-46 |
| MS.gene058661 | MS.gene70819 | -0.830609 | 2.67E-55 | -1.69E-46 |
| MS.gene058749 | MS.gene70819 | 0.819422 | 1.17E-52 | -1.69E-46 |
| MS.gene058833 | MS.gene70819 | 0.826218 | 3.06E-54 | -1.69E-46 |
| MS.gene058845 | MS.gene70819 | 0.807424 | 5.09E-50 | -1.69E-46 |
| MS.gene058851 | MS.gene70819 | 0.822031 | 2.94E-53 | -1.69E-46 |
| MS.gene058906 | MS.gene70819 | 0.812238 | 4.69E-51 | -1.69E-46 |
| MS.gene058982 | MS.gene70819 | 0.82662 | 2.45E-54 | -1.69E-46 |
| MS.gene059033 | MS.gene70819 | -0.820519 | 6.57E-53 | -1.69E-46 |
| MS.gene05907 | MS.gene70819 | 0.836116 | 1.13E-56 | -1.69E-46 |
| MS.gene059124 | MS.gene70819 | 0.817524 | 3.15E-52 | -1.69E-46 |
| MS.gene059128 | MS.gene70819 | 0.821018 | 5.05E-53 | -1.69E-46 |
| MS.gene059249 | MS.gene70819 | 0.803274 | 3.77E-49 | -1.69E-46 |
| MS.gene059285 | MS.gene70819 | 0.808213 | 3.46E-50 | -1.69E-46 |
| MS.gene059518 | MS.gene70819 | 0.828927 | 6.85E-55 | -1.69E-46 |
| MS.gene059597 | MS.gene70819 | 0.820457 | 6.79E-53 | -1.69E-46 |
| MS.gene059713 | MS.gene70819 | 0.82684 | 2.18E-54 | -1.69E-46 |
| MS.gene05984 | MS.gene70819 | 0.852098 | 5.77E-61 | -1.69E-46 |
| MS.gene059894 | MS.gene70819 | 0.825006 | 5.93E-54 | -1.69E-46 |
| MS.gene059899 | MS.gene70819 | 0.844772 | 6.15E-59 | -1.69E-46 |
| MS.gene060084 | MS.gene70819 | 0.873083 | 1.93E-67 | -1.69E-46 |
| MS.gene060137 | MS.gene70819 | -0.812958 | 3.26E-51 | -1.69E-46 |
| MS.gene060297 | MS.gene70819 | 0.812847 | 3.45E-51 | -1.69E-46 |
| MS.gene06037 | MS.gene70819 | 0.805018 | 1.63E-49 | -1.69E-46 |
| MS.gene060404 | MS.gene70819 | 0.852263 | 5.18E-61 | -1.69E-46 |
| MS.gene060476 | MS.gene70819 | 0.838955 | 2.11E-57 | -1.69E-46 |
| MS.gene060480 | MS.gene70819 | 0.844947 | 5.51E-59 | -1.69E-46 |
| MS.gene060495 | MS.gene70819 | 0.814034 | 1.89E-51 | -1.69E-46 |
| MS.gene060637 | MS.gene70819 | 0.807947 | 3.94E-50 | -1.69E-46 |
| MS.gene060683 | MS.gene70819 | 0.824205 | 9.16E-54 | -1.69E-46 |
| MS.gene060685 | MS.gene70819 | 0.812832 | 3.48E-51 | -1.69E-46 |
| MS.gene060802 | MS.gene70819 | 0.805037 | 1.62E-49 | -1.69E-46 |
| MS.gene060803 | MS.gene70819 | 0.814073 | 1.86E-51 | -1.69E-46 |
| MS.gene060869 | MS.gene70819 | 0.81625 | 6.09E-52 | -1.69E-46 |
| MS.gene060940 | MS.gene70819 | 0.806491 | 8.02E-50 | -1.69E-46 |
| MS.gene060942 | MS.gene70819 | 0.80639 | 8.42E-50 | -1.69E-46 |
| MS.gene060943 | MS.gene70819 | 0.803002 | 4.29E-49 | -1.69E-46 |
| MS.gene060998 | MS.gene70819 | 0.848155 | 7.34E-60 | -1.69E-46 |
| MS.gene061002 | MS.gene70819 | 0.806787 | 6.94E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene70819 | 0.832761 | 7.86E-56 | -1.69E-46 |
| MS.gene061113 | MS.gene70819 | 0.819601 | 1.07E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene70819 | MS.gene014281 | PPI |
| MS.gene70819 | MS.gene68222 | PPI |
| MS.gene064894 | MS.gene70819 | PPI |
| MS.gene70819 | MS.gene063165 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70819.t1 | MTR_1g080950 | 98.945 | 379 | 4 | 0 | 1 | 379 | 1 | 379 | 0.0 | 787 |
| MS.gene70819.t1 | MTR_1g080950 | 98.945 | 379 | 4 | 0 | 1 | 379 | 37 | 415 | 0.0 | 786 |
| MS.gene70819.t1 | MTR_7g115080 | 91.005 | 378 | 32 | 2 | 1 | 377 | 35 | 411 | 0.0 | 728 |
| MS.gene70819.t1 | MTR_7g115080 | 91.005 | 378 | 32 | 2 | 1 | 377 | 1 | 377 | 0.0 | 727 |
| MS.gene70819.t1 | MTR_7g115080 | 91.005 | 378 | 32 | 2 | 1 | 377 | 14 | 390 | 0.0 | 726 |
| MS.gene70819.t1 | MTR_4g120030 | 28.165 | 316 | 208 | 8 | 29 | 340 | 112 | 412 | 2.63e-28 | 115 |
| MS.gene70819.t1 | MTR_1g088480 | 27.160 | 324 | 217 | 8 | 28 | 347 | 118 | 426 | 3.34e-26 | 109 |
| MS.gene70819.t1 | MTR_4g063600 | 27.832 | 309 | 208 | 9 | 28 | 331 | 32 | 330 | 4.23e-25 | 104 |
| MS.gene70819.t1 | MTR_2g096660 | 28.662 | 314 | 199 | 11 | 28 | 331 | 38 | 336 | 6.09e-25 | 104 |
| MS.gene70819.t1 | MTR_4g063600 | 27.832 | 309 | 205 | 10 | 28 | 331 | 32 | 327 | 7.28e-24 | 101 |
| MS.gene70819.t1 | MTR_7g108490 | 24.768 | 323 | 216 | 8 | 29 | 342 | 15 | 319 | 2.72e-21 | 93.6 |
| MS.gene70819.t1 | MTR_7g108490 | 24.768 | 323 | 216 | 8 | 29 | 342 | 16 | 320 | 3.17e-21 | 93.6 |
| MS.gene70819.t1 | MTR_1g067530 | 25.074 | 339 | 210 | 9 | 26 | 329 | 110 | 439 | 8.99e-21 | 94.0 |
| MS.gene70819.t1 | MTR_4g102270 | 24.340 | 341 | 213 | 11 | 30 | 338 | 95 | 422 | 6.11e-15 | 76.3 |
| MS.gene70819.t1 | MTR_4g024600 | 24.189 | 339 | 214 | 12 | 28 | 335 | 101 | 427 | 8.60e-15 | 75.9 |
| MS.gene70819.t1 | MTR_5g011940 | 24.412 | 340 | 212 | 12 | 28 | 335 | 90 | 416 | 3.23e-14 | 73.9 |
| MS.gene70819.t1 | MTR_1g009600 | 25.688 | 327 | 217 | 14 | 26 | 337 | 3 | 318 | 5.87e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70819.t1 | AT5G28840 | 90.981 | 377 | 34 | 0 | 1 | 377 | 1 | 377 | 0.0 | 729 |
| MS.gene70819.t1 | AT5G28840 | 90.981 | 377 | 34 | 0 | 1 | 377 | 1 | 377 | 0.0 | 729 |
| MS.gene70819.t1 | AT3G62830 | 27.160 | 324 | 222 | 8 | 28 | 347 | 119 | 432 | 2.48e-28 | 115 |
| MS.gene70819.t1 | AT3G62830 | 27.160 | 324 | 222 | 8 | 28 | 347 | 119 | 432 | 2.48e-28 | 115 |
| MS.gene70819.t1 | AT2G47650 | 28.247 | 308 | 207 | 8 | 28 | 331 | 121 | 418 | 4.30e-28 | 114 |
| MS.gene70819.t1 | AT3G53520 | 27.744 | 328 | 222 | 9 | 26 | 348 | 118 | 435 | 4.30e-28 | 114 |
| MS.gene70819.t1 | AT2G47650 | 27.707 | 314 | 207 | 9 | 28 | 331 | 121 | 424 | 2.17e-26 | 110 |
| MS.gene70819.t1 | AT3G53520 | 27.134 | 328 | 222 | 10 | 26 | 348 | 118 | 433 | 3.91e-25 | 106 |
| MS.gene70819.t1 | AT2G28760 | 28.013 | 307 | 206 | 9 | 28 | 329 | 31 | 327 | 7.20e-25 | 104 |
| MS.gene70819.t1 | AT2G28760 | 28.013 | 307 | 206 | 9 | 28 | 329 | 31 | 327 | 7.20e-25 | 104 |
| MS.gene70819.t1 | AT2G28760 | 28.013 | 307 | 206 | 9 | 28 | 329 | 31 | 327 | 7.20e-25 | 104 |
| MS.gene70819.t1 | AT3G46440 | 27.653 | 311 | 202 | 10 | 28 | 329 | 29 | 325 | 8.36e-25 | 103 |
| MS.gene70819.t1 | AT3G46440 | 27.653 | 311 | 202 | 10 | 28 | 329 | 29 | 325 | 8.36e-25 | 103 |
| MS.gene70819.t1 | AT2G28760 | 28.013 | 307 | 206 | 9 | 28 | 329 | 62 | 358 | 2.08e-24 | 103 |
| MS.gene70819.t1 | AT5G59290 | 27.010 | 311 | 204 | 10 | 28 | 329 | 1 | 297 | 4.77e-24 | 101 |
| MS.gene70819.t1 | AT5G59290 | 27.010 | 311 | 204 | 10 | 28 | 329 | 30 | 326 | 7.18e-24 | 101 |
| MS.gene70819.t1 | AT1G73250 | 25.714 | 315 | 209 | 7 | 29 | 335 | 18 | 315 | 7.37e-24 | 100 |
| MS.gene70819.t1 | AT5G59290 | 27.010 | 311 | 204 | 10 | 28 | 329 | 45 | 341 | 9.35e-24 | 101 |
| MS.gene70819.t1 | AT5G59290 | 27.010 | 311 | 204 | 10 | 28 | 329 | 23 | 319 | 1.49e-23 | 100 |
| MS.gene70819.t1 | AT3G53520 | 25.779 | 353 | 220 | 11 | 26 | 348 | 118 | 458 | 2.25e-23 | 101 |
| MS.gene70819.t1 | AT1G17890 | 25.231 | 325 | 216 | 8 | 29 | 344 | 21 | 327 | 2.96e-23 | 99.4 |
| MS.gene70819.t1 | AT1G17890 | 25.231 | 325 | 216 | 8 | 29 | 344 | 13 | 319 | 3.14e-23 | 99.4 |
| MS.gene70819.t1 | AT1G17890 | 25.231 | 325 | 216 | 8 | 29 | 344 | 13 | 319 | 3.14e-23 | 99.4 |
| MS.gene70819.t1 | AT2G45310 | 26.100 | 341 | 205 | 14 | 28 | 335 | 97 | 423 | 8.71e-18 | 84.7 |
| MS.gene70819.t1 | AT3G23820 | 24.793 | 363 | 220 | 14 | 28 | 351 | 112 | 460 | 3.59e-16 | 80.1 |
| MS.gene70819.t1 | AT4G00110 | 24.706 | 340 | 211 | 13 | 28 | 335 | 91 | 417 | 4.04e-15 | 77.0 |
| MS.gene70819.t1 | AT1G02000 | 23.824 | 340 | 214 | 12 | 28 | 335 | 92 | 418 | 6.08e-14 | 73.2 |
| MS.gene70819.t1 | AT4G30440 | 23.754 | 341 | 213 | 12 | 28 | 335 | 88 | 414 | 1.15e-12 | 69.3 |
| MS.gene70819.t1 | AT1G53500 | 24.771 | 327 | 220 | 13 | 30 | 341 | 11 | 326 | 1.44e-12 | 69.7 |
Find 101 sgRNAs with CRISPR-Local
Find 162 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGAAGCTGCTAGGATTAA+TGG | 0.256067 | 1.2:-61216655 | MS.gene70819:CDS |
| CATAACATATATGGTCCTTT+TGG | 0.258635 | 1.2:-61216210 | MS.gene70819:CDS |
| TCATCACTTCCAATATTTAC+AGG | 0.269614 | 1.2:+61215513 | None:intergenic |
| CTGCCCGAAGTGAGCCTAAT+TGG | 0.271744 | 1.2:+61214998 | None:intergenic |
| GTTTCTAACTGTTTAAATTC+AGG | 0.285374 | 1.2:+61216470 | None:intergenic |
| ATCTTGAGAGAGAGCCTTAC+TGG | 0.304697 | 1.2:-61216987 | MS.gene70819:CDS |
| TTCCGCGAGCCTGTAAATAT+TGG | 0.315743 | 1.2:-61215522 | MS.gene70819:CDS |
| TTTCAATCTTGCCGCTGATA+TGG | 0.324249 | 1.2:-61216749 | MS.gene70819:CDS |
| GAGATGGCTGAGATCGTTCT+TGG | 0.352457 | 1.2:-61215474 | MS.gene70819:CDS |
| TATACCTTCAACTTCATTGT+TGG | 0.357453 | 1.2:+61215348 | None:intergenic |
| GCCTAATTGGACCGGTGCTT+GGG | 0.360185 | 1.2:+61215011 | None:intergenic |
| AATTCCATCTTGTTGATCTC+AGG | 0.363929 | 1.2:-61216816 | MS.gene70819:CDS |
| AAAATTTCCATCACTGGTGC+TGG | 0.368034 | 1.2:-61216949 | MS.gene70819:CDS |
| CAAAAGGACCATATATGTTA+TGG | 0.374113 | 1.2:+61216211 | None:intergenic |
| ATTTACAGGCTCGCGGAAAT+CGG | 0.374627 | 1.2:+61215527 | None:intergenic |
| AAGCACTACAACAAAGATTT+CGG | 0.376422 | 1.2:-61216258 | MS.gene70819:CDS |
| AGCCTAATTGGACCGGTGCT+TGG | 0.382304 | 1.2:+61215010 | None:intergenic |
| TTCAATCTTGCCGCTGATAT+GGG | 0.385962 | 1.2:-61216748 | MS.gene70819:CDS |
| GATTACATATGTCTGGATTA+AGG | 0.386996 | 1.2:-61215103 | MS.gene70819:CDS |
| ATTACATTATTGCTTCTGAT+TGG | 0.391720 | 1.2:-61216879 | MS.gene70819:CDS |
| GGTCTTGATACATCAGGATA+TGG | 0.392584 | 1.2:-61215054 | MS.gene70819:CDS |
| GGGAGGTTCCATAACATATA+TGG | 0.396979 | 1.2:-61216219 | MS.gene70819:CDS |
| ACTGCTTAACGGTTACTAAA+GGG | 0.409840 | 1.2:-61216783 | MS.gene70819:CDS |
| AACTACTAATGTCAGCTTGA+AGG | 0.417690 | 1.2:-61216450 | MS.gene70819:CDS |
| TTTCTAACTGTTTAAATTCA+GGG | 0.425655 | 1.2:+61216471 | None:intergenic |
| GGCTGAGGATTACATATGTC+TGG | 0.425884 | 1.2:-61215110 | MS.gene70819:CDS |
| GGGCCAGGAATGTGATGTAT+AGG | 0.440229 | 1.2:+61215432 | None:intergenic |
| AAGCTTAAAATTTCCATCAC+TGG | 0.443314 | 1.2:-61216955 | MS.gene70819:CDS |
| ATACATAATAACAGAATGAT+TGG | 0.454190 | 1.2:+61216705 | None:intergenic |
| TTCGGAATTGAGTGCCGCAT+TGG | 0.455787 | 1.2:-61216240 | MS.gene70819:CDS |
| TTCATTGATGAGTGTGTTGA+AGG | 0.460492 | 1.2:-61215955 | MS.gene70819:CDS |
| TTACGACCACGAACACCCTC+TGG | 0.466075 | 1.2:+61215411 | None:intergenic |
| CCACGAACACCCTCTGGGCC+AGG | 0.469580 | 1.2:+61215417 | None:intergenic |
| GGTCCAATTAGGCTCACTTC+GGG | 0.470769 | 1.2:-61215001 | MS.gene70819:CDS |
| TCGGAATTGAGTGCCGCATT+GGG | 0.470875 | 1.2:-61216239 | MS.gene70819:CDS |
| CTCTCTCTCAAGATTCTCAT+AGG | 0.472504 | 1.2:+61216996 | None:intergenic |
| TTCTGCAGGATGGGAAGTAC+TGG | 0.475790 | 1.2:-61217042 | None:intergenic |
| ACTCCTATACATCACATTCC+TGG | 0.476449 | 1.2:-61215435 | MS.gene70819:CDS |
| ACCCAAGCACCGGTCCAATT+AGG | 0.477394 | 1.2:-61215012 | MS.gene70819:CDS |
| AAATTTCCATCACTGGTGCT+GGG | 0.477839 | 1.2:-61216948 | MS.gene70819:CDS |
| AACTGCTTAACGGTTACTAA+AGG | 0.478063 | 1.2:-61216784 | MS.gene70819:CDS |
| CTAGGATTAATGGAATTAAG+AGG | 0.478585 | 1.2:-61216645 | MS.gene70819:intron |
| GCCGCTGATATGGGTGGAAT+GGG | 0.482360 | 1.2:-61216739 | MS.gene70819:CDS |
| CCTGGCCCAGAGGGTGTTCG+TGG | 0.486762 | 1.2:-61215417 | MS.gene70819:CDS |
| AAATTTGAGATGTGGGGAGA+TGG | 0.493691 | 1.2:-61216000 | MS.gene70819:CDS |
| TGCCGCTGATATGGGTGGAA+TGG | 0.494921 | 1.2:-61216740 | MS.gene70819:CDS |
| GGTCATGGATAACTGCTTAA+CGG | 0.498357 | 1.2:-61216794 | MS.gene70819:CDS |
| TACAGACAAATTTGAGATGT+GGG | 0.508195 | 1.2:-61216007 | MS.gene70819:CDS |
| GGCTCCAACAATGAAGTTGA+AGG | 0.508928 | 1.2:-61215352 | MS.gene70819:intron |
| GATTAAGGAACAACTTGAAA+GGG | 0.521122 | 1.2:-61215088 | MS.gene70819:CDS |
| CGGTCCAATTAGGCTCACTT+CGG | 0.527001 | 1.2:-61215002 | MS.gene70819:CDS |
| GCTCAAGGTCTTGATACATC+AGG | 0.527626 | 1.2:-61215060 | MS.gene70819:CDS |
| ATACCTTTCCATGTTCCAAA+AGG | 0.529802 | 1.2:+61216195 | None:intergenic |
| AATCGCGAACAAACCTCAGC+AGG | 0.536092 | 1.2:+61216413 | None:intergenic |
| TAATAAAAGAGAAACTTGGC+TGG | 0.537272 | 1.2:-61215374 | MS.gene70819:CDS |
| TGCTTTGTCATACAGGTGGA+AGG | 0.539745 | 1.2:-61216071 | MS.gene70819:intron |
| CAGCGGCAAGATTGAAAACA+TGG | 0.540286 | 1.2:+61216755 | None:intergenic |
| AATTTCCATCACTGGTGCTG+GGG | 0.543928 | 1.2:-61216947 | MS.gene70819:CDS |
| TCTTGTTGATCTCAGGGTCA+TGG | 0.544557 | 1.2:-61216809 | MS.gene70819:CDS |
| ATTCCATCTTGTTGATCTCA+GGG | 0.549458 | 1.2:-61216815 | MS.gene70819:CDS |
| CTGCTTAACGGTTACTAAAG+GGG | 0.550109 | 1.2:-61216782 | MS.gene70819:CDS |
| TTCAACACACTCATCAATGA+AGG | 0.550166 | 1.2:+61215957 | None:intergenic |
| GTTTAGCCACAAGATGCGTA+TGG | 0.550376 | 1.2:-61216312 | MS.gene70819:intron |
| CTTAGCGCGGCGTCTCAAGA+AGG | 0.553238 | 1.2:-61216908 | MS.gene70819:CDS |
| GGCTCACTTCGGGCAGCAGA+CGG | 0.553347 | 1.2:-61214991 | MS.gene70819:CDS |
| TCAATATGATTGAAGCTGCT+AGG | 0.554345 | 1.2:-61216663 | MS.gene70819:CDS |
| CGAAGTGAGCCTAATTGGAC+CGG | 0.556358 | 1.2:+61215003 | None:intergenic |
| TGGTATTGTAGGATGGGCTG+AGG | 0.562487 | 1.2:-61215125 | MS.gene70819:intron |
| TCATACAGGTGGAAGGGAGA+AGG | 0.564053 | 1.2:-61216064 | MS.gene70819:intron |
| GGATTAAGGAACAACTTGAA+AGG | 0.565415 | 1.2:-61215089 | MS.gene70819:CDS |
| GTCTGATGCATGGCCTGCTG+AGG | 0.565899 | 1.2:-61216426 | MS.gene70819:intron |
| ATTTCCATCACTGGTGCTGG+GGG | 0.574182 | 1.2:-61216946 | MS.gene70819:CDS |
| CTTGAAAGGGAGAAGGCTCA+AGG | 0.580968 | 1.2:-61215075 | MS.gene70819:CDS |
| GCTAGAGAAGCTTGCAACAG+AGG | 0.582464 | 1.2:-61216289 | MS.gene70819:CDS |
| GAATTGAGTGCCGCATTGGG+AGG | 0.584070 | 1.2:-61216236 | MS.gene70819:CDS |
| ACACTAATAAAAGAGAAACT+TGG | 0.584612 | 1.2:-61215378 | MS.gene70819:CDS |
| AGGATATGGCTCATCAAAAG+TGG | 0.585626 | 1.2:-61215040 | MS.gene70819:CDS |
| AGTGTGTTGAAGGTGTACTT+AGG | 0.590072 | 1.2:-61215945 | MS.gene70819:intron |
| TTATCGCGTCGCACTTAGCG+CGG | 0.590377 | 1.2:-61216921 | MS.gene70819:CDS |
| AATCTTGCCGCTGATATGGG+TGG | 0.591075 | 1.2:-61216745 | MS.gene70819:CDS |
| AGCGCGGCGTCTCAAGAAGG+AGG | 0.592364 | 1.2:-61216905 | MS.gene70819:CDS |
| CATCACATTCCTGGCCCAGA+GGG | 0.594287 | 1.2:-61215426 | MS.gene70819:CDS |
| TGACCCTGAGATCAACAAGA+TGG | 0.595396 | 1.2:+61216812 | None:intergenic |
| TTTAGCCACAAGATGCGTAT+GGG | 0.596572 | 1.2:-61216311 | MS.gene70819:intron |
| CTACAGACAAATTTGAGATG+TGG | 0.598727 | 1.2:-61216008 | MS.gene70819:CDS |
| AATAAAAGAGAAACTTGGCT+GGG | 0.602593 | 1.2:-61215373 | MS.gene70819:CDS |
| GCTTTGTCATACAGGTGGAA+GGG | 0.602719 | 1.2:-61216070 | MS.gene70819:intron |
| TACGACCACGAACACCCTCT+GGG | 0.602751 | 1.2:+61215412 | None:intergenic |
| TTCCAATATTTACAGGCTCG+CGG | 0.606017 | 1.2:+61215520 | None:intergenic |
| AGTGGTGCAAACCCAAGCAC+CGG | 0.611968 | 1.2:-61215022 | MS.gene70819:CDS |
| TCTAGCCCATACGCATCTTG+TGG | 0.616959 | 1.2:+61216306 | None:intergenic |
| GGAACAACTTGAAAGGGAGA+AGG | 0.619660 | 1.2:-61215082 | MS.gene70819:CDS |
| GCTTGAAGGAGTCTGATGCA+TGG | 0.646402 | 1.2:-61216436 | MS.gene70819:CDS |
| ACCCATTCCACCCATATCAG+CGG | 0.650854 | 1.2:+61216738 | None:intergenic |
| GCGCGGCGTCTCAAGAAGGA+GGG | 0.659404 | 1.2:-61216904 | MS.gene70819:CDS |
| ACAGACAAATTTGAGATGTG+GGG | 0.667327 | 1.2:-61216006 | MS.gene70819:CDS |
| ACATCACATTCCTGGCCCAG+AGG | 0.671457 | 1.2:-61215427 | MS.gene70819:CDS |
| AGGGTAGATACAAGCACTTG+AGG | 0.678133 | 1.2:+61216490 | None:intergenic |
| AAATATTGGAAGTGATGAGA+TGG | 0.678358 | 1.2:-61215508 | MS.gene70819:CDS |
| GATGGTCAGCATGAATGAGA+TGG | 0.684833 | 1.2:-61215490 | MS.gene70819:CDS |
| TGTTATGGAACCTCCCAATG+CGG | 0.724863 | 1.2:+61216226 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATAAGTTTTTATCCAATT+TGG | - | chr1.2:61216712-61216731 | MS.gene70819:CDS | 15.0% |
| !!! | TTAGTAGATGTTTTTAATTT+TGG | - | chr1.2:61215888-61215907 | MS.gene70819:intron | 15.0% |
| !!! | TTTATTTTTACATTAAGCTT+GGG | - | chr1.2:61215647-61215666 | MS.gene70819:intron | 15.0% |
| !! | ATACATAATAACAGAATGAT+TGG | + | chr1.2:61215306-61215325 | None:intergenic | 20.0% |
| !! | ATTCATTAAAGTCAAACAAT+AGG | + | chr1.2:61216821-61216840 | None:intergenic | 20.0% |
| !! | CAAAATCACTAATATTTGTT+CGG | + | chr1.2:61215424-61215443 | None:intergenic | 20.0% |
| !! | GACTTTAATGAATATTCAAA+GGG | - | chr1.2:61216828-61216847 | MS.gene70819:CDS | 20.0% |
| !! | TGACTTTAATGAATATTCAA+AGG | - | chr1.2:61216827-61216846 | MS.gene70819:CDS | 20.0% |
| !! | TTTCTAACTGTTTAAATTCA+GGG | + | chr1.2:61215540-61215559 | None:intergenic | 20.0% |
| !!! | ATAATTTTAGTATCCGTAAT+TGG | - | chr1.2:61216343-61216362 | MS.gene70819:intron | 20.0% |
| !!! | CTTTATTTTTACATTAAGCT+TGG | - | chr1.2:61215646-61215665 | MS.gene70819:intron | 20.0% |
| !!! | GAATTATAATTTTGAGCTTA+TGG | - | chr1.2:61216158-61216177 | MS.gene70819:intron | 20.0% |
| ! | AAAAAACACATGAATAAAGC+TGG | + | chr1.2:61216121-61216140 | None:intergenic | 25.0% |
| ! | ACACTAATAAAAGAGAAACT+TGG | - | chr1.2:61216630-61216649 | MS.gene70819:intron | 25.0% |
| ! | ACATGAAAAGTTTGGTTAAA+TGG | + | chr1.2:61216208-61216227 | None:intergenic | 25.0% |
| ! | ACTAATATTTGTTCGGTTAT+AGG | + | chr1.2:61215417-61215436 | None:intergenic | 25.0% |
| ! | ATTACATTATTGCTTCTGAT+TGG | - | chr1.2:61215129-61215148 | MS.gene70819:intron | 25.0% |
| ! | GTTTCTAACTGTTTAAATTC+AGG | + | chr1.2:61215541-61215560 | None:intergenic | 25.0% |
| ! | TATCTAAATTCTGGTATTGT+AGG | - | chr1.2:61216872-61216891 | MS.gene70819:CDS | 25.0% |
| ! | TTAAAGTCAAACAATAGGAA+AGG | + | chr1.2:61216816-61216835 | None:intergenic | 25.0% |
| ! | TTATTAAGACACAAGAAAGA+AGG | + | chr1.2:61216698-61216717 | None:intergenic | 25.0% |
| !! | AAACAAACATTTTTCGCAAT+TGG | + | chr1.2:61215482-61215501 | None:intergenic | 25.0% |
| !! | GAAATTTTAAGCTTTTCTGA+TGG | + | chr1.2:61215047-61215066 | None:intergenic | 25.0% |
| !!! | CATCTACTAATTTGCTTATT+CGG | + | chr1.2:61215878-61215897 | None:intergenic | 25.0% |
| !!! | GAAAGTGTAATGGAATTTTT+AGG | - | chr1.2:61216753-61216772 | MS.gene70819:CDS | 25.0% |
| AAATATTGGAAGTGATGAGA+TGG | - | chr1.2:61216500-61216519 | MS.gene70819:CDS | 30.0% | |
| AAATGCATCAAACAACCAAA+AGG | + | chr1.2:61215621-61215640 | None:intergenic | 30.0% | |
| AAATTCTGGTATTGTAGGAT+GGG | - | chr1.2:61216877-61216896 | MS.gene70819:CDS | 30.0% | |
| AAGCAACAAACTCATTACAT+CGG | + | chr1.2:61215922-61215941 | None:intergenic | 30.0% | |
| AAGCACTACAACAAAGATTT+CGG | - | chr1.2:61215750-61215769 | MS.gene70819:intron | 30.0% | |
| AAGCTTAAAATTTCCATCAC+TGG | - | chr1.2:61215053-61215072 | MS.gene70819:CDS | 30.0% | |
| AATAAAAGAGAAACTTGGCT+GGG | - | chr1.2:61216635-61216654 | MS.gene70819:intron | 30.0% | |
| ATTGCATAAATGACATTGAG+AGG | - | chr1.2:61216305-61216324 | MS.gene70819:CDS | 30.0% | |
| CAAAAGGACCATATATGTTA+TGG | + | chr1.2:61215800-61215819 | None:intergenic | 30.0% | |
| CTAGGATTAATGGAATTAAG+AGG | - | chr1.2:61215363-61215382 | MS.gene70819:CDS | 30.0% | |
| GATTAAGGAACAACTTGAAA+GGG | - | chr1.2:61216920-61216939 | MS.gene70819:CDS | 30.0% | |
| GATTACATATGTCTGGATTA+AGG | - | chr1.2:61216905-61216924 | MS.gene70819:CDS | 30.0% | |
| TAAATTCTGGTATTGTAGGA+TGG | - | chr1.2:61216876-61216895 | MS.gene70819:CDS | 30.0% | |
| TAATAAAAGAGAAACTTGGC+TGG | - | chr1.2:61216634-61216653 | MS.gene70819:intron | 30.0% | |
| TATACCTTCAACTTCATTGT+TGG | + | chr1.2:61216663-61216682 | None:intergenic | 30.0% | |
| TCATCACTTCCAATATTTAC+AGG | + | chr1.2:61216498-61216517 | None:intergenic | 30.0% | |
| TTACAGCAGTATCTAAATTC+TGG | - | chr1.2:61216863-61216882 | MS.gene70819:CDS | 30.0% | |
| TTTAGTATCCGTAATTGGTT+GGG | - | chr1.2:61216348-61216367 | MS.gene70819:intron | 30.0% | |
| ! | AGTACTGGAAAAACTAACTA+TGG | - | chr1.2:61214981-61215000 | MS.gene70819:CDS | 30.0% |
| ! | CATAACATATATGGTCCTTT+TGG | - | chr1.2:61215798-61215817 | MS.gene70819:intron | 30.0% |
| ! | TACAGACAAATTTGAGATGT+GGG | - | chr1.2:61216001-61216020 | MS.gene70819:CDS | 30.0% |
| ! | TATCTGACACATCATGTTTT+TGG | - | chr1.2:61215390-61215409 | MS.gene70819:CDS | 30.0% |
| ! | TCTTCTTTCAGAAAGTGTAA+TGG | - | chr1.2:61216743-61216762 | MS.gene70819:CDS | 30.0% |
| ! | TTTGGTTGTTTGATGCATTT+TGG | - | chr1.2:61215621-61215640 | MS.gene70819:intron | 30.0% |
| ! | TTTTAGTATCCGTAATTGGT+TGG | - | chr1.2:61216347-61216366 | MS.gene70819:intron | 30.0% |
| !! | GCGAAAAATGTTTGTTTTTC+AGG | - | chr1.2:61215485-61215504 | MS.gene70819:CDS | 30.0% |
| AACAACAGACCAAATTGTCA+GGG | + | chr1.2:61216442-61216461 | None:intergenic | 35.0% | |
| AACTACTAATGTCAGCTTGA+AGG | - | chr1.2:61215558-61215577 | MS.gene70819:intron | 35.0% | |
| AACTGCTTAACGGTTACTAA+AGG | - | chr1.2:61215224-61215243 | MS.gene70819:intron | 35.0% | |
| AATTCCATCTTGTTGATCTC+AGG | - | chr1.2:61215192-61215211 | MS.gene70819:intron | 35.0% | |
| ACTGCTTAACGGTTACTAAA+GGG | - | chr1.2:61215225-61215244 | MS.gene70819:intron | 35.0% | |
| ATACCTTTCCATGTTCCAAA+AGG | + | chr1.2:61215816-61215835 | None:intergenic | 35.0% | |
| ATTCCATCTTGTTGATCTCA+GGG | - | chr1.2:61215193-61215212 | MS.gene70819:intron | 35.0% | |
| ATTGAAGCTGCTAGGATTAA+TGG | - | chr1.2:61215353-61215372 | MS.gene70819:CDS | 35.0% | |
| CAGCTCAAACATGAAAAGTT+TGG | + | chr1.2:61216216-61216235 | None:intergenic | 35.0% | |
| GGATTAAGGAACAACTTGAA+AGG | - | chr1.2:61216919-61216938 | MS.gene70819:CDS | 35.0% | |
| TAACAACAGACCAAATTGTC+AGG | + | chr1.2:61216443-61216462 | None:intergenic | 35.0% | |
| TAAGACACAAGAAAGAAGGA+AGG | + | chr1.2:61216694-61216713 | None:intergenic | 35.0% | |
| TATGATAAGCCCTGACAATT+TGG | - | chr1.2:61216430-61216449 | MS.gene70819:CDS | 35.0% | |
| TCAATATGATTGAAGCTGCT+AGG | - | chr1.2:61215345-61215364 | MS.gene70819:intron | 35.0% | |
| TCATGTTTGAGCTGTTCTAA+GGG | - | chr1.2:61216222-61216241 | MS.gene70819:CDS | 35.0% | |
| TTCAACACACTCATCAATGA+AGG | + | chr1.2:61216054-61216073 | None:intergenic | 35.0% | |
| TTCATGTTTGAGCTGTTCTA+AGG | - | chr1.2:61216221-61216240 | MS.gene70819:CDS | 35.0% | |
| TTCATTGATGAGTGTGTTGA+AGG | - | chr1.2:61216053-61216072 | MS.gene70819:CDS | 35.0% | |
| TTGGGATAGGGAAAATGATA+CGG | - | chr1.2:61216366-61216385 | MS.gene70819:intron | 35.0% | |
| ! | ACAGACAAATTTGAGATGTG+GGG | - | chr1.2:61216002-61216021 | MS.gene70819:CDS | 35.0% |
| ! | CACTTTCTGAAAGAAGATGA+AGG | + | chr1.2:61216740-61216759 | None:intergenic | 35.0% |
| ! | CTACAGACAAATTTGAGATG+TGG | - | chr1.2:61216000-61216019 | MS.gene70819:CDS | 35.0% |
| !! | AGTTTGTTGCTTTGTCATAC+AGG | - | chr1.2:61215930-61215949 | MS.gene70819:intron | 35.0% |
| !!! | TATATGGTCCTTTTGGAACA+TGG | - | chr1.2:61215805-61215824 | MS.gene70819:intron | 35.0% |
| AAAATTTCCATCACTGGTGC+TGG | - | chr1.2:61215059-61215078 | MS.gene70819:CDS | 40.0% | |
| AAATTTCCATCACTGGTGCT+GGG | - | chr1.2:61215060-61215079 | MS.gene70819:CDS | 40.0% | |
| ACTCCTATACATCACATTCC+TGG | - | chr1.2:61216573-61216592 | MS.gene70819:intron | 40.0% | |
| AGAAGATGAAGGAGCCAAAT+TGG | + | chr1.2:61216729-61216748 | None:intergenic | 40.0% | |
| AGGATATGGCTCATCAAAAG+TGG | - | chr1.2:61216968-61216987 | MS.gene70819:CDS | 40.0% | |
| ATCCGTAATTGGTTGGGATA+GGG | - | chr1.2:61216354-61216373 | MS.gene70819:intron | 40.0% | |
| CTCTCTCTCAAGATTCTCAT+AGG | + | chr1.2:61215015-61215034 | None:intergenic | 40.0% | |
| CTGCTTAACGGTTACTAAAG+GGG | - | chr1.2:61215226-61215245 | MS.gene70819:intron | 40.0% | |
| GAAAAATGAGCACATGACTG+AGG | - | chr1.2:61215154-61215173 | MS.gene70819:intron | 40.0% | |
| GGGAGGTTCCATAACATATA+TGG | - | chr1.2:61215789-61215808 | MS.gene70819:intron | 40.0% | |
| GGTCATGGATAACTGCTTAA+CGG | - | chr1.2:61215214-61215233 | MS.gene70819:intron | 40.0% | |
| GGTCTTGATACATCAGGATA+TGG | - | chr1.2:61216954-61216973 | MS.gene70819:CDS | 40.0% | |
| TATCCGTAATTGGTTGGGAT+AGG | - | chr1.2:61216353-61216372 | MS.gene70819:intron | 40.0% | |
| TCTTGGCTGATTGTTTGGTT+TGG | - | chr1.2:61216090-61216109 | MS.gene70819:intron | 40.0% | |
| TTCAATCTTGCCGCTGATAT+GGG | - | chr1.2:61215260-61215279 | MS.gene70819:intron | 40.0% | |
| TTCCAATATTTACAGGCTCG+CGG | + | chr1.2:61216491-61216510 | None:intergenic | 40.0% | |
| TTCCCTATCCCAACCAATTA+CGG | + | chr1.2:61216359-61216378 | None:intergenic | 40.0% | |
| TTTAGCCACAAGATGCGTAT+GGG | - | chr1.2:61215697-61215716 | MS.gene70819:intron | 40.0% | |
| TTTCAATCTTGCCGCTGATA+TGG | - | chr1.2:61215259-61215278 | MS.gene70819:intron | 40.0% | |
| ! | AAATTTGAGATGTGGGGAGA+TGG | - | chr1.2:61216008-61216027 | MS.gene70819:CDS | 40.0% |
| ! | AGTGTGTTGAAGGTGTACTT+AGG | - | chr1.2:61216063-61216082 | MS.gene70819:intron | 40.0% |
| ! | TGTTGAAGGTGTACTTAGGT+AGG | - | chr1.2:61216067-61216086 | MS.gene70819:intron | 40.0% |
| ! | TGTTGATTGAGTGAGCTAAC+TGG | + | chr1.2:61216283-61216302 | None:intergenic | 40.0% |
| !! | TTGTTGCTTTGTCATACAGG+TGG | - | chr1.2:61215933-61215952 | MS.gene70819:intron | 40.0% |
| !!! | TGAGATCGTTCTTGGTTTTG+AGG | - | chr1.2:61216542-61216561 | MS.gene70819:intron | 40.0% |
| AGGGTAGATACAAGCACTTG+AGG | + | chr1.2:61215521-61215540 | None:intergenic | 45.0% | |
| AGGTGTACTTAGGTAGGTCT+TGG | - | chr1.2:61216073-61216092 | MS.gene70819:intron | 45.0% | |
| ATCTTGAGAGAGAGCCTTAC+TGG | - | chr1.2:61215021-61215040 | MS.gene70819:CDS | 45.0% | |
| ATTTACAGGCTCGCGGAAAT+CGG | + | chr1.2:61216484-61216503 | None:intergenic | 45.0% | |
| CAGCGGCAAGATTGAAAACA+TGG | + | chr1.2:61215256-61215275 | None:intergenic | 45.0% | |
| GATGGTCAGCATGAATGAGA+TGG | - | chr1.2:61216518-61216537 | MS.gene70819:intron | 45.0% | |
| GCTCAAGGTCTTGATACATC+AGG | - | chr1.2:61216948-61216967 | MS.gene70819:CDS | 45.0% | |
| GCTTTGTCATACAGGTGGAA+GGG | - | chr1.2:61215938-61215957 | MS.gene70819:intron | 45.0% | |
| GGAACAACTTGAAAGGGAGA+AGG | - | chr1.2:61216926-61216945 | MS.gene70819:CDS | 45.0% | |
| GGCTCCAACAATGAAGTTGA+AGG | - | chr1.2:61216656-61216675 | MS.gene70819:CDS | 45.0% | |
| GGCTGAGGATTACATATGTC+TGG | - | chr1.2:61216898-61216917 | MS.gene70819:CDS | 45.0% | |
| GTAGGTCTTGGCTGATTGTT+TGG | - | chr1.2:61216085-61216104 | MS.gene70819:intron | 45.0% | |
| GTTTAGCCACAAGATGCGTA+TGG | - | chr1.2:61215696-61215715 | MS.gene70819:intron | 45.0% | |
| TCTTGTTGATCTCAGGGTCA+TGG | - | chr1.2:61215199-61215218 | MS.gene70819:intron | 45.0% | |
| TGACCCTGAGATCAACAAGA+TGG | + | chr1.2:61215199-61215218 | None:intergenic | 45.0% | |
| TGCTTTGTCATACAGGTGGA+AGG | - | chr1.2:61215937-61215956 | MS.gene70819:intron | 45.0% | |
| TGTTATGGAACCTCCCAATG+CGG | + | chr1.2:61215785-61215804 | None:intergenic | 45.0% | |
| TTCCGCGAGCCTGTAAATAT+TGG | - | chr1.2:61216486-61216505 | MS.gene70819:CDS | 45.0% | |
| ! | AATTTCCATCACTGGTGCTG+GGG | - | chr1.2:61215061-61215080 | MS.gene70819:CDS | 45.0% |
| ! | AGCTTTTCTGATGGCCAGTA+AGG | + | chr1.2:61215038-61215057 | None:intergenic | 45.0% |
| !! | GGTTTGTTCGCGATTCCTTT+TGG | - | chr1.2:61215603-61215622 | MS.gene70819:intron | 45.0% |
| !!! | GGTCCTTTTGGAACATGGAA+AGG | - | chr1.2:61215810-61215829 | MS.gene70819:intron | 45.0% |
| AATCGCGAACAAACCTCAGC+AGG | + | chr1.2:61215598-61215617 | None:intergenic | 50.0% | |
| AATCTTGCCGCTGATATGGG+TGG | - | chr1.2:61215263-61215282 | MS.gene70819:intron | 50.0% | |
| ACCCATTCCACCCATATCAG+CGG | + | chr1.2:61215273-61215292 | None:intergenic | 50.0% | |
| CGAAGTGAGCCTAATTGGAC+CGG | + | chr1.2:61217008-61217027 | None:intergenic | 50.0% | |
| CGGTCCAATTAGGCTCACTT+CGG | - | chr1.2:61217006-61217025 | MS.gene70819:CDS | 50.0% | |
| CTTGAAAGGGAGAAGGCTCA+AGG | - | chr1.2:61216933-61216952 | MS.gene70819:CDS | 50.0% | |
| GAGATGGCTGAGATCGTTCT+TGG | - | chr1.2:61216534-61216553 | MS.gene70819:intron | 50.0% | |
| GCTAGAGAAGCTTGCAACAG+AGG | - | chr1.2:61215719-61215738 | MS.gene70819:intron | 50.0% | |
| GCTTGAAGGAGTCTGATGCA+TGG | - | chr1.2:61215572-61215591 | MS.gene70819:intron | 50.0% | |
| GCTTTCCGACAAAAAGCAGC+AGG | + | chr1.2:61215972-61215991 | None:intergenic | 50.0% | |
| GGGCCAGGAATGTGATGTAT+AGG | + | chr1.2:61216579-61216598 | None:intergenic | 50.0% | |
| GGTCCAATTAGGCTCACTTC+GGG | - | chr1.2:61217007-61217026 | MS.gene70819:CDS | 50.0% | |
| TCATACAGGTGGAAGGGAGA+AGG | - | chr1.2:61215944-61215963 | MS.gene70819:intron | 50.0% | |
| TCTAGCCCATACGCATCTTG+TGG | + | chr1.2:61215705-61215724 | None:intergenic | 50.0% | |
| ! | ATTTCCATCACTGGTGCTGG+GGG | - | chr1.2:61215062-61215081 | MS.gene70819:CDS | 50.0% |
| ! | TCGGAATTGAGTGCCGCATT+GGG | - | chr1.2:61215769-61215788 | MS.gene70819:intron | 50.0% |
| ! | TTCGGAATTGAGTGCCGCAT+TGG | - | chr1.2:61215768-61215787 | MS.gene70819:intron | 50.0% |
| !! | TGGTATTGTAGGATGGGCTG+AGG | - | chr1.2:61216883-61216902 | MS.gene70819:CDS | 50.0% |
| !!! | AGGCTCCTGCTGCTTTTTGT+CGG | - | chr1.2:61215964-61215983 | MS.gene70819:CDS | 50.0% |
| AAAACCCCCAGCACCAGTGA+TGG | + | chr1.2:61215069-61215088 | None:intergenic | 55.0% | |
| ACATCACATTCCTGGCCCAG+AGG | - | chr1.2:61216581-61216600 | MS.gene70819:intron | 55.0% | |
| AGCCTAATTGGACCGGTGCT+TGG | + | chr1.2:61217001-61217020 | None:intergenic | 55.0% | |
| AGTGGTGCAAACCCAAGCAC+CGG | - | chr1.2:61216986-61217005 | MS.gene70819:CDS | 55.0% | |
| CATCACATTCCTGGCCCAGA+GGG | - | chr1.2:61216582-61216601 | MS.gene70819:intron | 55.0% | |
| CTGCCCGAAGTGAGCCTAAT+TGG | + | chr1.2:61217013-61217032 | None:intergenic | 55.0% | |
| GCCGCTGATATGGGTGGAAT+GGG | - | chr1.2:61215269-61215288 | MS.gene70819:intron | 55.0% | |
| GCCTAATTGGACCGGTGCTT+GGG | + | chr1.2:61217000-61217019 | None:intergenic | 55.0% | |
| TACGACCACGAACACCCTCT+GGG | + | chr1.2:61216599-61216618 | None:intergenic | 55.0% | |
| TGCCGCTGATATGGGTGGAA+TGG | - | chr1.2:61215268-61215287 | MS.gene70819:intron | 55.0% | |
| TTACGACCACGAACACCCTC+TGG | + | chr1.2:61216600-61216619 | None:intergenic | 55.0% | |
| TTATCGCGTCGCACTTAGCG+CGG | - | chr1.2:61215087-61215106 | MS.gene70819:CDS | 55.0% | |
| ! | GAATTGAGTGCCGCATTGGG+AGG | - | chr1.2:61215772-61215791 | MS.gene70819:intron | 55.0% |
| !! | ACCCAAGCACCGGTCCAATT+AGG | - | chr1.2:61216996-61217015 | MS.gene70819:CDS | 55.0% |
| CTTAGCGCGGCGTCTCAAGA+AGG | - | chr1.2:61215100-61215119 | MS.gene70819:CDS | 60.0% | |
| GTCTGATGCATGGCCTGCTG+AGG | - | chr1.2:61215582-61215601 | MS.gene70819:intron | 60.0% | |
| AGCGCGGCGTCTCAAGAAGG+AGG | - | chr1.2:61215103-61215122 | MS.gene70819:CDS | 65.0% | |
| GCGCGGCGTCTCAAGAAGGA+GGG | - | chr1.2:61215104-61215123 | MS.gene70819:CDS | 65.0% | |
| GGCTCACTTCGGGCAGCAGA+CGG | - | chr1.2:61217017-61217036 | MS.gene70819:CDS | 65.0% | |
| CCACGAACACCCTCTGGGCC+AGG | + | chr1.2:61216594-61216613 | None:intergenic | 70.0% | |
| !! | CCTGGCCCAGAGGGTGTTCG+TGG | - | chr1.2:61216591-61216610 | MS.gene70819:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 61214975 | 61217055 | 61214975 | ID=MS.gene70819 |
| chr1.2 | mRNA | 61214975 | 61217055 | 61214975 | ID=MS.gene70819.t1;Parent=MS.gene70819 |
| chr1.2 | exon | 61216646 | 61217055 | 61216646 | ID=MS.gene70819.t1.exon1;Parent=MS.gene70819.t1 |
| chr1.2 | CDS | 61216646 | 61217055 | 61216646 | ID=cds.MS.gene70819.t1;Parent=MS.gene70819.t1 |
| chr1.2 | exon | 61216427 | 61216523 | 61216427 | ID=MS.gene70819.t1.exon2;Parent=MS.gene70819.t1 |
| chr1.2 | CDS | 61216427 | 61216523 | 61216427 | ID=cds.MS.gene70819.t1;Parent=MS.gene70819.t1 |
| chr1.2 | exon | 61216199 | 61216328 | 61216199 | ID=MS.gene70819.t1.exon3;Parent=MS.gene70819.t1 |
| chr1.2 | CDS | 61216199 | 61216328 | 61216199 | ID=cds.MS.gene70819.t1;Parent=MS.gene70819.t1 |
| chr1.2 | exon | 61215946 | 61216078 | 61215946 | ID=MS.gene70819.t1.exon4;Parent=MS.gene70819.t1 |
| chr1.2 | CDS | 61215946 | 61216078 | 61215946 | ID=cds.MS.gene70819.t1;Parent=MS.gene70819.t1 |
| chr1.2 | exon | 61215353 | 61215560 | 61215353 | ID=MS.gene70819.t1.exon5;Parent=MS.gene70819.t1 |
| chr1.2 | CDS | 61215353 | 61215560 | 61215353 | ID=cds.MS.gene70819.t1;Parent=MS.gene70819.t1 |
| chr1.2 | exon | 61214975 | 61215136 | 61214975 | ID=MS.gene70819.t1.exon6;Parent=MS.gene70819.t1 |
| chr1.2 | CDS | 61214975 | 61215136 | 61214975 | ID=cds.MS.gene70819.t1;Parent=MS.gene70819.t1 |
| Gene Sequence |
| Protein sequence |
