Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70378.t1 | XP_013457203.1 | 96.9 | 451 | 13 | 1 | 1 | 450 | 1 | 451 | 1.80E-242 | 848.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70378.t1 | Q7NXD4 | 33.4 | 290 | 163 | 8 | 84 | 364 | 5 | 273 | 6.3e-31 | 136.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70378.t1 | A0A072UN52 | 96.9 | 451 | 13 | 1 | 1 | 450 | 1 | 451 | 1.3e-242 | 848.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04915 | MS.gene70378 | 0.800717 | 1.26E-48 | -1.69E-46 |
| MS.gene049382 | MS.gene70378 | 0.826449 | 2.70E-54 | -1.69E-46 |
| MS.gene049703 | MS.gene70378 | -0.812765 | 3.60E-51 | -1.69E-46 |
| MS.gene049756 | MS.gene70378 | 0.825308 | 5.03E-54 | -1.69E-46 |
| MS.gene049758 | MS.gene70378 | 0.800386 | 1.48E-48 | -1.69E-46 |
| MS.gene04984 | MS.gene70378 | 0.806009 | 1.01E-49 | -1.69E-46 |
| MS.gene050114 | MS.gene70378 | 0.814536 | 1.47E-51 | -1.69E-46 |
| MS.gene050277 | MS.gene70378 | 0.816279 | 6.00E-52 | -1.69E-46 |
| MS.gene050317 | MS.gene70378 | 0.811376 | 7.22E-51 | -1.69E-46 |
| MS.gene050623 | MS.gene70378 | -0.845082 | 5.07E-59 | -1.69E-46 |
| MS.gene050762 | MS.gene70378 | 0.822831 | 1.92E-53 | -1.69E-46 |
| MS.gene050763 | MS.gene70378 | 0.825501 | 4.53E-54 | -1.69E-46 |
| MS.gene050987 | MS.gene70378 | 0.806613 | 7.56E-50 | -1.69E-46 |
| MS.gene051243 | MS.gene70378 | 0.824489 | 7.85E-54 | -1.69E-46 |
| MS.gene051245 | MS.gene70378 | 0.820376 | 7.09E-53 | -1.69E-46 |
| MS.gene051535 | MS.gene70378 | 0.805153 | 1.53E-49 | -1.69E-46 |
| MS.gene051662 | MS.gene70378 | 0.810933 | 9.01E-51 | -1.69E-46 |
| MS.gene052286 | MS.gene70378 | 0.817939 | 2.54E-52 | -1.69E-46 |
| MS.gene052302 | MS.gene70378 | 0.804058 | 2.59E-49 | -1.69E-46 |
| MS.gene052376 | MS.gene70378 | 0.805283 | 1.44E-49 | -1.69E-46 |
| MS.gene052856 | MS.gene70378 | 0.800105 | 1.68E-48 | -1.69E-46 |
| MS.gene053109 | MS.gene70378 | 0.820631 | 6.19E-53 | -1.69E-46 |
| MS.gene053216 | MS.gene70378 | 0.819963 | 8.81E-53 | -1.69E-46 |
| MS.gene053381 | MS.gene70378 | 0.804563 | 2.03E-49 | -1.69E-46 |
| MS.gene053630 | MS.gene70378 | 0.800613 | 1.33E-48 | -1.69E-46 |
| MS.gene054379 | MS.gene70378 | 0.822064 | 2.89E-53 | -1.69E-46 |
| MS.gene054823 | MS.gene70378 | 0.825061 | 5.75E-54 | -1.69E-46 |
| MS.gene055133 | MS.gene70378 | 0.814543 | 1.46E-51 | -1.69E-46 |
| MS.gene055413 | MS.gene70378 | 0.802674 | 5.02E-49 | -1.69E-46 |
| MS.gene055441 | MS.gene70378 | 0.848724 | 5.11E-60 | -1.69E-46 |
| MS.gene055816 | MS.gene70378 | -0.804447 | 2.15E-49 | -1.69E-46 |
| MS.gene056069 | MS.gene70378 | -0.809748 | 1.62E-50 | -1.69E-46 |
| MS.gene056432 | MS.gene70378 | 0.822031 | 2.94E-53 | -1.69E-46 |
| MS.gene056552 | MS.gene70378 | 0.812402 | 4.32E-51 | -1.69E-46 |
| MS.gene056580 | MS.gene70378 | 0.832487 | 9.19E-56 | -1.69E-46 |
| MS.gene056760 | MS.gene70378 | 0.827186 | 1.80E-54 | -1.69E-46 |
| MS.gene057057 | MS.gene70378 | 0.827543 | 1.48E-54 | -1.69E-46 |
| MS.gene057140 | MS.gene70378 | 0.833332 | 5.67E-56 | -1.69E-46 |
| MS.gene057234 | MS.gene70378 | 0.833009 | 6.82E-56 | -1.69E-46 |
| MS.gene057754 | MS.gene70378 | 0.807988 | 3.86E-50 | -1.69E-46 |
| MS.gene058054 | MS.gene70378 | 0.807469 | 4.98E-50 | -1.69E-46 |
| MS.gene058055 | MS.gene70378 | 0.827103 | 1.88E-54 | -1.69E-46 |
| MS.gene058182 | MS.gene70378 | 0.823323 | 1.47E-53 | -1.69E-46 |
| MS.gene058238 | MS.gene70378 | 0.80694 | 6.44E-50 | -1.69E-46 |
| MS.gene058399 | MS.gene70378 | 0.824619 | 7.32E-54 | -1.69E-46 |
| MS.gene058646 | MS.gene70378 | 0.833014 | 6.80E-56 | -1.69E-46 |
| MS.gene058654 | MS.gene70378 | 0.825772 | 3.91E-54 | -1.69E-46 |
| MS.gene058661 | MS.gene70378 | -0.800842 | 1.19E-48 | -1.69E-46 |
| MS.gene058906 | MS.gene70378 | 0.805946 | 1.04E-49 | -1.69E-46 |
| MS.gene058982 | MS.gene70378 | 0.805946 | 1.04E-49 | -1.69E-46 |
| MS.gene060084 | MS.gene70378 | 0.853598 | 2.15E-61 | -1.69E-46 |
| MS.gene060296 | MS.gene70378 | 0.81139 | 7.17E-51 | -1.69E-46 |
| MS.gene060297 | MS.gene70378 | 0.818762 | 1.66E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70378.t1 | MTR_4g094258 | 98.226 | 451 | 7 | 1 | 1 | 450 | 1 | 451 | 0.0 | 915 |
| MS.gene70378.t1 | MTR_4g094258 | 91.796 | 451 | 6 | 2 | 1 | 450 | 1 | 421 | 0.0 | 836 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70378.t1 | AT2G13840 | 62.381 | 420 | 152 | 3 | 31 | 448 | 17 | 432 | 0.0 | 541 |
Find 106 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATCTCTTGTTGATGATTT+TGG | 0.031208 | 4.3:+20174531 | MS.gene70378:CDS |
| CAAACCTTGTAATTGTTTCT+AGG | 0.169257 | 4.3:-20177555 | None:intergenic |
| TTGATCATTGTTTACCTCTT+TGG | 0.224468 | 4.3:+20177632 | MS.gene70378:CDS |
| AAAATCCTGTTGCTGTTATT+AGG | 0.262181 | 4.3:+20176111 | MS.gene70378:CDS |
| CACTTCCCAGTTCAGATTCA+TGG | 0.274753 | 4.3:-20177420 | None:intergenic |
| CTATATGGTGCAATGCTATA+AGG | 0.299389 | 4.3:+20177491 | MS.gene70378:CDS |
| CAATGCTATAAGGGAATTAT+TGG | 0.306066 | 4.3:+20177501 | MS.gene70378:CDS |
| GATGACCCATGAACAAGTTT+TGG | 0.306632 | 4.3:+20174452 | MS.gene70378:CDS |
| CGGGCTACATGGAGCCTTCC+GGG | 0.310253 | 4.3:-20175833 | None:intergenic |
| GTAGAATCGGCTCGCAAATA+TGG | 0.314220 | 4.3:+20175113 | MS.gene70378:CDS |
| AAAAGTGATGGAAGGCTTGC+AGG | 0.316738 | 4.3:+20176173 | MS.gene70378:CDS |
| TTAAGGTAGCTAGGCCTATA+TGG | 0.320672 | 4.3:+20177476 | MS.gene70378:CDS |
| CTAGAAACAATTACAAGGTT+TGG | 0.330990 | 4.3:+20177556 | MS.gene70378:CDS |
| TGTAACTGAATGGGTTTCAT+TGG | 0.360755 | 4.3:+20174485 | MS.gene70378:CDS |
| TAAAAGCCAAAACTTGTTCA+TGG | 0.361148 | 4.3:-20174458 | None:intergenic |
| TAGAAACAATTACAAGGTTT+GGG | 0.368543 | 4.3:+20177557 | MS.gene70378:CDS |
| TTGCCGTTCTGGCTCATCCA+TGG | 0.379810 | 4.3:+20176081 | MS.gene70378:CDS |
| GAGCATGTTTGTAGGATTGC+AGG | 0.382471 | 4.3:+20175797 | MS.gene70378:CDS |
| AACCTCCTAATAACAGCAAC+AGG | 0.387926 | 4.3:-20176116 | None:intergenic |
| TTCCAACGTTTCTACCAGTC+AGG | 0.399060 | 4.3:+20177708 | MS.gene70378:CDS |
| TTAGCATATTACAGCAGTAT+TGG | 0.401822 | 4.3:+20175659 | MS.gene70378:CDS |
| AGGACACCATGAATCTGAAC+TGG | 0.403868 | 4.3:+20177414 | MS.gene70378:CDS |
| GATGAAGTAGCGAAAGAAGA+AGG | 0.406465 | 4.3:-20174513 | None:intergenic |
| TAATATGCTAAAACGTGAAC+AGG | 0.417023 | 4.3:-20175647 | None:intergenic |
| TTAAATGGGAGCATGTTTGT+AGG | 0.422997 | 4.3:+20175789 | MS.gene70378:CDS |
| TTAAAAGAAGCAGGCCTTCA+TGG | 0.425114 | 4.3:+20176137 | MS.gene70378:CDS |
| CTTATAGCATTGCACCATAT+AGG | 0.426022 | 4.3:-20177490 | None:intergenic |
| CAATTCAAACAAGAGCAATA+AGG | 0.426821 | 4.3:+20174380 | MS.gene70378:CDS |
| GATGGAAAATGAAGAGTTTG+AGG | 0.430917 | 4.3:+20177669 | MS.gene70378:CDS |
| ACGGGCTACATGGAGCCTTC+CGG | 0.436221 | 4.3:-20175834 | None:intergenic |
| CAAATCCTTTCCACAATACA+AGG | 0.438699 | 4.3:-20177608 | None:intergenic |
| TATATGGTGCAATGCTATAA+GGG | 0.441866 | 4.3:+20177492 | MS.gene70378:CDS |
| TTCTAAGTCTCTATGAGAAC+CGG | 0.445315 | 4.3:-20177739 | None:intergenic |
| AAGTCATGCAAAACTAGTAC+TGG | 0.451309 | 4.3:-20177451 | None:intergenic |
| CAACCATAGCACGGGCTACA+TGG | 0.457224 | 4.3:-20175844 | None:intergenic |
| CGAGCCGATTCTACAGCCTC+GGG | 0.458504 | 4.3:-20175104 | None:intergenic |
| GCTCTCTCAACAACCTTAGA+AGG | 0.460070 | 4.3:-20174639 | None:intergenic |
| TCTGACAGATCACGATACTA+TGG | 0.460637 | 4.3:+20175073 | MS.gene70378:CDS |
| TGCCGTTCTGGCTCATCCAT+GGG | 0.473635 | 4.3:+20176082 | MS.gene70378:CDS |
| CATCCCCGAGGCTGTAGAAT+CGG | 0.477174 | 4.3:+20175100 | MS.gene70378:CDS |
| ATGACTTTCTTAAGGTAGCT+AGG | 0.478259 | 4.3:+20177467 | MS.gene70378:CDS |
| ATTAGGAGGTTAAAAGAAGC+AGG | 0.481000 | 4.3:+20176128 | MS.gene70378:CDS |
| TTTATTGCTTCCTCCACCAC+AGG | 0.488429 | 4.3:-20176035 | None:intergenic |
| AACCGGAGTTCCTCCCTGAC+TGG | 0.502354 | 4.3:-20177722 | None:intergenic |
| AAAAGCCAAAACTTGTTCAT+GGG | 0.503915 | 4.3:-20174457 | None:intergenic |
| TAAAACTTACGCCGTTCATG+TGG | 0.507053 | 4.3:-20174662 | None:intergenic |
| CTCAATCCAGTTATGGGAGA+TGG | 0.507268 | 4.3:+20174336 | None:intergenic |
| TTGGTTAAGTAGCCAAGAGA+TGG | 0.514042 | 4.3:+20177651 | MS.gene70378:CDS |
| TATTGGACCATCAAAATTTG+AGG | 0.515732 | 4.3:+20175676 | MS.gene70378:CDS |
| GGGAAGTGAACCTGTGGTGG+AGG | 0.520171 | 4.3:+20176025 | MS.gene70378:CDS |
| ATGAAGTAGCGAAAGAAGAA+GGG | 0.523100 | 4.3:-20174512 | None:intergenic |
| TGTAGACCTCCATCCCATGA+AGG | 0.525586 | 4.3:-20176151 | None:intergenic |
| TAAAAGAAGCAGGCCTTCAT+GGG | 0.526089 | 4.3:+20176138 | MS.gene70378:CDS |
| TTCACCCTTGTATTGTGGAA+AGG | 0.529199 | 4.3:+20177603 | MS.gene70378:CDS |
| ATTGGAGGGTCAGACTATCA+TGG | 0.530154 | 4.3:+20177385 | MS.gene70378:CDS |
| GCGAGCCGATTCTACAGCCT+CGG | 0.530385 | 4.3:-20175105 | None:intergenic |
| GCCCGTGCTATGGTTGAAGC+AGG | 0.533657 | 4.3:+20175851 | MS.gene70378:CDS |
| ATCCTGTTGCTGTTATTAGG+AGG | 0.535516 | 4.3:+20176114 | MS.gene70378:CDS |
| GCTCCATGTAGCCCGTGCTA+TGG | 0.537065 | 4.3:+20175841 | MS.gene70378:CDS |
| AACGTTGGAAAGCTTCAACT+TGG | 0.537287 | 4.3:-20177695 | None:intergenic |
| CAGGGGAAGTGAACCTGTGG+TGG | 0.538470 | 4.3:+20176022 | MS.gene70378:intron |
| TACCAGTCAGGGAGGAACTC+CGG | 0.543925 | 4.3:+20177720 | MS.gene70378:CDS |
| AGAAGCAGGCCTTCATGGGA+TGG | 0.546814 | 4.3:+20176142 | MS.gene70378:CDS |
| GGAGGTTCACCCTTGTATTG+TGG | 0.547408 | 4.3:+20177598 | MS.gene70378:CDS |
| AAGAAGAATAAGAACAGAGG+TGG | 0.548356 | 4.3:+20174417 | MS.gene70378:CDS |
| CTAACCTAGAAACAATTACA+AGG | 0.549045 | 4.3:+20177551 | MS.gene70378:CDS |
| GTTAGTATTAGACGGTTCCT+CGG | 0.549211 | 4.3:-20177533 | None:intergenic |
| GCAGGCAACGGAGTTGCTCC+CGG | 0.551611 | 4.3:+20175815 | MS.gene70378:CDS |
| ATTGTACTAACTTCAACACC+TGG | 0.552254 | 4.3:-20175149 | None:intergenic |
| GTTTCTAGGTTAGTATTAGA+CGG | 0.556827 | 4.3:-20177541 | None:intergenic |
| GGGTCAGACTATCATGGAAG+AGG | 0.560598 | 4.3:+20177391 | MS.gene70378:CDS |
| CAATATTACTTGGAGTAAGC+AGG | 0.571257 | 4.3:-20175926 | None:intergenic |
| AAGAAGAAGAATAAGAACAG+AGG | 0.572930 | 4.3:+20174414 | MS.gene70378:CDS |
| ATGGAGGTCTACAAAAGTGA+TGG | 0.578050 | 4.3:+20176161 | MS.gene70378:CDS |
| TCCCTGACTGGTAGAAACGT+TGG | 0.579843 | 4.3:-20177710 | None:intergenic |
| ACCTGCTTCAACCATAGCAC+GGG | 0.581188 | 4.3:-20175852 | None:intergenic |
| AACCTGCTTCAACCATAGCA+CGG | 0.582016 | 4.3:-20175853 | None:intergenic |
| TTTGGGGTGCAGAAGCCTGT+TGG | 0.583868 | 4.3:+20174549 | MS.gene70378:CDS |
| GTTTGTAGGATTGCAGGCAA+CGG | 0.584225 | 4.3:+20175803 | MS.gene70378:CDS |
| TCCAACGTTTCTACCAGTCA+GGG | 0.584764 | 4.3:+20177709 | MS.gene70378:CDS |
| TATGGCATTAAGATAATCCC+AGG | 0.585730 | 4.3:+20175131 | MS.gene70378:CDS |
| GTTGAGAGAGCCCACATGAA+CGG | 0.586954 | 4.3:+20174651 | MS.gene70378:CDS |
| AGTGACCTGGCTGATGCCTA+CGG | 0.590587 | 4.3:+20177352 | MS.gene70378:CDS |
| TGTCACTCTAAATGCAGTGA+TGG | 0.597504 | 4.3:+20174606 | MS.gene70378:CDS |
| TGCCCATGGATGAGCCAGAA+CGG | 0.598033 | 4.3:-20176084 | None:intergenic |
| ACAGATCACGATACTATGGC+AGG | 0.600390 | 4.3:+20175077 | MS.gene70378:CDS |
| GCAACGGAGTTGCTCCCGGA+AGG | 0.600663 | 4.3:+20175819 | MS.gene70378:CDS |
| AAAGGCCGTAGGCATCAGCC+AGG | 0.611891 | 4.3:-20177357 | None:intergenic |
| AGCAGGCCTTCATGGGATGG+AGG | 0.629146 | 4.3:+20176145 | MS.gene70378:CDS |
| TCAGACTATCATGGAAGAGG+AGG | 0.633037 | 4.3:+20177394 | MS.gene70378:CDS |
| TGGTGGAGACACTGAAGCAG+AGG | 0.633552 | 4.3:+20175622 | MS.gene70378:CDS |
| CATGCAAAACTAGTACTGGA+AGG | 0.634426 | 4.3:-20177447 | None:intergenic |
| ATTATTGGAGTGTTATGCCG+AGG | 0.638655 | 4.3:+20177516 | MS.gene70378:CDS |
| AGGTCTACAAAAGTGATGGA+AGG | 0.642912 | 4.3:+20176165 | MS.gene70378:CDS |
| TTGTACTAACTTCAACACCT+GGG | 0.643477 | 4.3:-20175148 | None:intergenic |
| TCTTGGCTACTTAACCAAAG+AGG | 0.654559 | 4.3:-20177646 | None:intergenic |
| AAAACTTACGCCGTTCATGT+GGG | 0.655200 | 4.3:-20174661 | None:intergenic |
| TTATCTTCGAGCAAAGAACA+TGG | 0.660434 | 4.3:+20175736 | MS.gene70378:CDS |
| TTTCAGGGGAAGTGAACCTG+TGG | 0.661634 | 4.3:+20176019 | MS.gene70378:intron |
| GTATGCAGCATATAGTGACC+TGG | 0.671490 | 4.3:+20177339 | MS.gene70378:intron |
| GGACACCATGAATCTGAACT+GGG | 0.676928 | 4.3:+20177415 | MS.gene70378:CDS |
| AAATCCTTTCCACAATACAA+GGG | 0.689638 | 4.3:-20177607 | None:intergenic |
| TACTATGGCAGGCATCCCCG+AGG | 0.703124 | 4.3:+20175088 | MS.gene70378:CDS |
| AACGTTTCTACCAGTCAGGG+AGG | 0.703221 | 4.3:+20177712 | MS.gene70378:CDS |
| GAGCCGATTCTACAGCCTCG+GGG | 0.740138 | 4.3:-20175103 | None:intergenic |
| AAAATGATTTGTGATACTGG+GGG | 0.788482 | 4.3:+20176056 | MS.gene70378:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATGGTTATTATTTTATA+AGG | + | chr4.3:20174829-20174848 | MS.gene70378:intron | 10.0% |
| !!! | ATTTTTGTTTGAATTATTTA+AGG | + | chr4.3:20174728-20174747 | MS.gene70378:intron | 10.0% |
| !! | TTAATTAGAATCAATTATGA+AGG | + | chr4.3:20175484-20175503 | MS.gene70378:intron | 15.0% |
| !!! | ATTTTTTATGTTTCCAAAAT+CGG | - | chr4.3:20177087-20177106 | None:intergenic | 15.0% |
| !!! | TACAGTTTTTTTGTTTTATT+TGG | - | chr4.3:20174784-20174803 | None:intergenic | 15.0% |
| !!! | TTTTAAATTTGTAACTGAAT+GGG | + | chr4.3:20174476-20174495 | MS.gene70378:CDS | 15.0% |
| !!! | TTTTTGTAGTTAAGAAAAAA+TGG | + | chr4.3:20175981-20176000 | MS.gene70378:intron | 15.0% |
| !!! | TTTTTTCTTAACTACAAAAA+TGG | - | chr4.3:20175981-20176000 | None:intergenic | 15.0% |
| !!! | AATTAACTTGAACTTGAAAT+TGG | - | chr4.3:20175470-20175489 | None:intergenic | 20.0% |
| !!! | ATAAAAATGATTTGTGATAC+TGG | + | chr4.3:20176053-20176072 | MS.gene70378:CDS | 20.0% |
| !!! | ATAAGTTTTTGTCAAACATA+AGG | + | chr4.3:20175705-20175724 | MS.gene70378:CDS | 20.0% |
| !!! | CATAAAAAATCGTTATTTTG+CGG | + | chr4.3:20177097-20177116 | MS.gene70378:intron | 20.0% |
| !!! | CTTTTAAATTTGTAACTGAA+TGG | + | chr4.3:20174475-20174494 | MS.gene70378:CDS | 20.0% |
| !!! | TAAAAATGATTTGTGATACT+GGG | + | chr4.3:20176054-20176073 | MS.gene70378:CDS | 20.0% |
| !!! | TAAGTTTTTGTCAAACATAA+GGG | + | chr4.3:20175706-20175725 | MS.gene70378:CDS | 20.0% |
| !!! | TATTTTGAATGAATCAATTC+TGG | + | chr4.3:20175333-20175352 | MS.gene70378:intron | 20.0% |
| !!! | TTAGTACAATATTTTATCCA+AGG | + | chr4.3:20175162-20175181 | MS.gene70378:CDS | 20.0% |
| ! | AAAGCTTAACAAGCTAAAAA+TGG | + | chr4.3:20175763-20175782 | MS.gene70378:CDS | 25.0% |
| ! | AATCACTGTGATTTCATATA+TGG | - | chr4.3:20176875-20176894 | None:intergenic | 25.0% |
| ! | AATCGTCACTAAACAAAATT+GGG | + | chr4.3:20176547-20176566 | MS.gene70378:intron | 25.0% |
| ! | AGGATAATGAAGTCAATTTA+AGG | + | chr4.3:20174849-20174868 | MS.gene70378:intron | 25.0% |
| ! | CTTAAGTTTGAAAATTACCT+TGG | - | chr4.3:20175182-20175201 | None:intergenic | 25.0% |
| ! | GGACACATTTACATAAAATT+AGG | + | chr4.3:20175390-20175409 | MS.gene70378:intron | 25.0% |
| ! | GGATGATAATTAGATTTGAT+GGG | + | chr4.3:20176748-20176767 | MS.gene70378:intron | 25.0% |
| ! | TAATGAAGTCAATTTAAGGA+TGG | + | chr4.3:20174853-20174872 | MS.gene70378:intron | 25.0% |
| ! | TAGAAACAATTACAAGGTTT+GGG | + | chr4.3:20177557-20177576 | MS.gene70378:CDS | 25.0% |
| ! | TCACTAAATCTTACAATTTG+AGG | - | chr4.3:20176433-20176452 | None:intergenic | 25.0% |
| ! | TCTCATAAAAACCAAAACTA+AGG | + | chr4.3:20176254-20176273 | MS.gene70378:intron | 25.0% |
| ! | TGGATGATAATTAGATTTGA+TGG | + | chr4.3:20176747-20176766 | MS.gene70378:intron | 25.0% |
| !! | AAAAATGATTTGTGATACTG+GGG | + | chr4.3:20176055-20176074 | MS.gene70378:CDS | 25.0% |
| !! | AAGAAAACTACCATTTGTTA+TGG | - | chr4.3:20176691-20176710 | None:intergenic | 25.0% |
| !! | AAGCGATAATTTTCAATACT+CGG | + | chr4.3:20176971-20176990 | MS.gene70378:intron | 25.0% |
| !! | ATTGATTTCCTTTGTAGTTT+AGG | + | chr4.3:20174998-20175017 | MS.gene70378:intron | 25.0% |
| !! | TTAAGCATCTTGTATTTTCA+GGG | + | chr4.3:20176004-20176023 | MS.gene70378:intron | 25.0% |
| !! | TTCCAATGAATTCTAAAAGT+TGG | + | chr4.3:20174945-20174964 | MS.gene70378:intron | 25.0% |
| !!! | AACCAACTTTTAGAATTCAT+TGG | - | chr4.3:20174950-20174969 | None:intergenic | 25.0% |
| !!! | CGATATAATAGTTTTAAACC+TGG | + | chr4.3:20176501-20176520 | MS.gene70378:intron | 25.0% |
| !!! | TGATCTTGCTTGTTAATTTT+TGG | + | chr4.3:20177317-20177336 | MS.gene70378:intron | 25.0% |
| !!! | TTTTGTTTTTTGATTGTCGT+AGG | + | chr4.3:20174692-20174711 | MS.gene70378:intron | 25.0% |
| AAATCCTTTCCACAATACAA+GGG | - | chr4.3:20177610-20177629 | None:intergenic | 30.0% | |
| AAGAAGAAGAATAAGAACAG+AGG | + | chr4.3:20174414-20174433 | MS.gene70378:CDS | 30.0% | |
| ACTTTGTCAATTGTCATACA+AGG | + | chr4.3:20176284-20176303 | MS.gene70378:intron | 30.0% | |
| AGAACCAATGGAGAAAAAAA+AGG | - | chr4.3:20175579-20175598 | None:intergenic | 30.0% | |
| AGCTAAAAATGGCTCTTAAA+TGG | + | chr4.3:20175774-20175793 | MS.gene70378:CDS | 30.0% | |
| ATCGCTTCACTAATATGATT+AGG | - | chr4.3:20176958-20176977 | None:intergenic | 30.0% | |
| CAATCGTCACTAAACAAAAT+TGG | + | chr4.3:20176546-20176565 | MS.gene70378:intron | 30.0% | |
| CAATGCTATAAGGGAATTAT+TGG | + | chr4.3:20177501-20177520 | MS.gene70378:CDS | 30.0% | |
| CAATTCAAACAAGAGCAATA+AGG | + | chr4.3:20174380-20174399 | MS.gene70378:CDS | 30.0% | |
| CAATTCTGGTATAAATGAGT+TGG | + | chr4.3:20175347-20175366 | MS.gene70378:intron | 30.0% | |
| CATAAAAACCAAAACTAAGG+TGG | + | chr4.3:20176257-20176276 | MS.gene70378:intron | 30.0% | |
| CTAACCTAGAAACAATTACA+AGG | + | chr4.3:20177551-20177570 | MS.gene70378:CDS | 30.0% | |
| CTAGAAACAATTACAAGGTT+TGG | + | chr4.3:20177556-20177575 | MS.gene70378:CDS | 30.0% | |
| GAAAGTTAACTGTATTGTAG+AGG | + | chr4.3:20174887-20174906 | MS.gene70378:intron | 30.0% | |
| GCTAAAAATGGCTCTTAAAT+GGG | + | chr4.3:20175775-20175794 | MS.gene70378:CDS | 30.0% | |
| GCTTGAACACTTAATGATTA+TGG | + | chr4.3:20174813-20174832 | MS.gene70378:intron | 30.0% | |
| TAATATGCTAAAACGTGAAC+AGG | - | chr4.3:20175650-20175669 | None:intergenic | 30.0% | |
| TATATGGTGCAATGCTATAA+GGG | + | chr4.3:20177492-20177511 | MS.gene70378:CDS | 30.0% | |
| TATTGGACCATCAAAATTTG+AGG | + | chr4.3:20175676-20175695 | MS.gene70378:CDS | 30.0% | |
| TGTGATGTTATCAAATCATC+AGG | + | chr4.3:20176378-20176397 | MS.gene70378:intron | 30.0% | |
| TGTTACCATTTGTTCATAAC+AGG | + | chr4.3:20175037-20175056 | MS.gene70378:intron | 30.0% | |
| TGTTGTCACAATTGTGTAAT+AGG | + | chr4.3:20177250-20177269 | MS.gene70378:intron | 30.0% | |
| TTAGCATATTACAGCAGTAT+TGG | + | chr4.3:20175659-20175678 | MS.gene70378:CDS | 30.0% | |
| TTGATCATTGTTTACCTCTT+TGG | + | chr4.3:20177632-20177651 | MS.gene70378:CDS | 30.0% | |
| TTTCACCTGTTATGAACAAA+TGG | - | chr4.3:20175045-20175064 | None:intergenic | 30.0% | |
| TTTGATATTGCAATGAAACG+TGG | + | chr4.3:20177046-20177065 | MS.gene70378:intron | 30.0% | |
| ! | AAAAGCCAAAACTTGTTCAT+GGG | - | chr4.3:20174460-20174479 | None:intergenic | 30.0% |
| ! | AAAATCCTGTTGCTGTTATT+AGG | + | chr4.3:20176111-20176130 | MS.gene70378:CDS | 30.0% |
| ! | AAAATGATTTGTGATACTGG+GGG | + | chr4.3:20176056-20176075 | MS.gene70378:CDS | 30.0% |
| ! | AATTTTCAATACTCGGAATC+AGG | + | chr4.3:20176978-20176997 | MS.gene70378:intron | 30.0% |
| ! | AGTTTTGCATGACTTTCTTA+AGG | + | chr4.3:20177459-20177478 | MS.gene70378:CDS | 30.0% |
| ! | ATTTTCAATACTCGGAATCA+GGG | + | chr4.3:20176979-20176998 | MS.gene70378:intron | 30.0% |
| ! | CAAACCTTGTAATTGTTTCT+AGG | - | chr4.3:20177558-20177577 | None:intergenic | 30.0% |
| ! | CAATTGATTCAGTGTATGTT+TGG | - | chr4.3:20175546-20175565 | None:intergenic | 30.0% |
| ! | GGTTATTACATAAGTGTTGT+GGG | - | chr4.3:20176636-20176655 | None:intergenic | 30.0% |
| ! | GTTAAGCATCTTGTATTTTC+AGG | + | chr4.3:20176003-20176022 | MS.gene70378:intron | 30.0% |
| ! | GTTTCTAGGTTAGTATTAGA+CGG | - | chr4.3:20177544-20177563 | None:intergenic | 30.0% |
| ! | TAAAAGCCAAAACTTGTTCA+TGG | - | chr4.3:20174461-20174480 | None:intergenic | 30.0% |
| ! | TAAATGAGTTGGATGTAATG+TGG | + | chr4.3:20175358-20175377 | MS.gene70378:intron | 30.0% |
| ! | TAAGCATCTTGTATTTTCAG+GGG | + | chr4.3:20176005-20176024 | MS.gene70378:intron | 30.0% |
| ! | TAGGTTGAACGATAAATTTG+AGG | + | chr4.3:20175409-20175428 | MS.gene70378:intron | 30.0% |
| ! | TGGTTATTACATAAGTGTTG+TGG | - | chr4.3:20176637-20176656 | None:intergenic | 30.0% |
| ! | TTCTAAAAGTTGGTTGTCTA+AGG | + | chr4.3:20174955-20174974 | MS.gene70378:intron | 30.0% |
| ! | TTGATGCTTGTTGATTGAAT+TGG | + | chr4.3:20175206-20175225 | MS.gene70378:intron | 30.0% |
| ! | TTTTTGTCAAACATAAGGGA+CGG | + | chr4.3:20175710-20175729 | MS.gene70378:CDS | 30.0% |
| !!! | AAGTCCTTTTTTTTCTCCAT+TGG | + | chr4.3:20175572-20175591 | MS.gene70378:intron | 30.0% |
| !!! | ATCTCTTGTTGATGATTTTG+GGG | + | chr4.3:20174533-20174552 | MS.gene70378:CDS | 30.0% |
| !!! | CATCTCTTGTTGATGATTTT+GGG | + | chr4.3:20174532-20174551 | MS.gene70378:CDS | 30.0% |
| !!! | TCATCTCTTGTTGATGATTT+TGG | + | chr4.3:20174531-20174550 | MS.gene70378:CDS | 30.0% |
| AAAACGAGCCTAAACTACAA+AGG | - | chr4.3:20175009-20175028 | None:intergenic | 35.0% | |
| AAAATCGGATGTTACTGCAT+TGG | - | chr4.3:20177072-20177091 | None:intergenic | 35.0% | |
| AAGAAGAATAAGAACAGAGG+TGG | + | chr4.3:20174417-20174436 | MS.gene70378:CDS | 35.0% | |
| AAGTCAATTTAAGGATGGTG+TGG | + | chr4.3:20174858-20174877 | MS.gene70378:intron | 35.0% | |
| AAGTCATGCAAAACTAGTAC+TGG | - | chr4.3:20177454-20177473 | None:intergenic | 35.0% | |
| ACAACACAATGAGATGTAGT+AGG | - | chr4.3:20177236-20177255 | None:intergenic | 35.0% | |
| AGGCTGAAATTCAATTGTAG+AGG | + | chr4.3:20175429-20175448 | MS.gene70378:intron | 35.0% | |
| ATAACAAGTGAAGTGATGCA+TGG | + | chr4.3:20176474-20176493 | MS.gene70378:intron | 35.0% | |
| ATCAAAAAGATATCGGGCAA+AGG | - | chr4.3:20175900-20175919 | None:intergenic | 35.0% | |
| ATCATCCAATGTCCACAAAA+AGG | - | chr4.3:20176735-20176754 | None:intergenic | 35.0% | |
| ATCTAGCAATCAACAAGTGA+AGG | - | chr4.3:20175957-20175976 | None:intergenic | 35.0% | |
| ATGAAGTAGCGAAAGAAGAA+GGG | - | chr4.3:20174515-20174534 | None:intergenic | 35.0% | |
| ATGACTTTCTTAAGGTAGCT+AGG | + | chr4.3:20177467-20177486 | MS.gene70378:CDS | 35.0% | |
| ATTAGGAGGTTAAAAGAAGC+AGG | + | chr4.3:20176128-20176147 | MS.gene70378:CDS | 35.0% | |
| ATTGTACTAACTTCAACACC+TGG | - | chr4.3:20175152-20175171 | None:intergenic | 35.0% | |
| CAAATCCTTTCCACAATACA+AGG | - | chr4.3:20177611-20177630 | None:intergenic | 35.0% | |
| CAATATTACTTGGAGTAAGC+AGG | - | chr4.3:20175929-20175948 | None:intergenic | 35.0% | |
| CTATATGGTGCAATGCTATA+AGG | + | chr4.3:20177491-20177510 | MS.gene70378:CDS | 35.0% | |
| CTTATAGCATTGCACCATAT+AGG | - | chr4.3:20177493-20177512 | None:intergenic | 35.0% | |
| CTTCATACAGTCTCTTTATG+TGG | - | chr4.3:20176834-20176853 | None:intergenic | 35.0% | |
| GAAGGCAACACAATATTACT+TGG | - | chr4.3:20175939-20175958 | None:intergenic | 35.0% | |
| GATGGAAAATGAAGAGTTTG+AGG | + | chr4.3:20177669-20177688 | MS.gene70378:CDS | 35.0% | |
| GATGTAATGTGGTTTATGTC+TGG | + | chr4.3:20175369-20175388 | MS.gene70378:intron | 35.0% | |
| GTCCACCATCAAAAAGATAT+CGG | - | chr4.3:20175907-20175926 | None:intergenic | 35.0% | |
| TAATTGTCCAAGTGCATGTT+TGG | + | chr4.3:20175291-20175310 | MS.gene70378:intron | 35.0% | |
| TATGGCATTAAGATAATCCC+AGG | + | chr4.3:20175131-20175150 | MS.gene70378:CDS | 35.0% | |
| TCCACCATCAAAAAGATATC+GGG | - | chr4.3:20175906-20175925 | None:intergenic | 35.0% | |
| TCTGTGTGTTCCATAACAAA+TGG | + | chr4.3:20176678-20176697 | MS.gene70378:intron | 35.0% | |
| TGTTCGTTTATGACTAGACA+TGG | - | chr4.3:20177174-20177193 | None:intergenic | 35.0% | |
| TTATCTTCGAGCAAAGAACA+TGG | + | chr4.3:20175736-20175755 | MS.gene70378:CDS | 35.0% | |
| TTGTACTAACTTCAACACCT+GGG | - | chr4.3:20175151-20175170 | None:intergenic | 35.0% | |
| ! | AAGTAGATCCACCTTAGTTT+TGG | - | chr4.3:20176268-20176287 | None:intergenic | 35.0% |
| ! | AATGCAGTAACATCCGATTT+TGG | + | chr4.3:20177071-20177090 | MS.gene70378:intron | 35.0% |
| ! | ACTCTTCATTTTCCATCTCT+TGG | - | chr4.3:20177666-20177685 | None:intergenic | 35.0% |
| ! | TAATGACTTGTGCATTCACT+TGG | - | chr4.3:20176657-20176676 | None:intergenic | 35.0% |
| ! | TGTAACTGAATGGGTTTCAT+TGG | + | chr4.3:20174485-20174504 | MS.gene70378:CDS | 35.0% |
| ! | TGTTGATTGAATTGGCACTT+TGG | + | chr4.3:20175214-20175233 | MS.gene70378:intron | 35.0% |
| ! | TTAAATGGGAGCATGTTTGT+AGG | + | chr4.3:20175789-20175808 | MS.gene70378:CDS | 35.0% |
| ! | TTTGCCCGATATCTTTTTGA+TGG | + | chr4.3:20175899-20175918 | MS.gene70378:CDS | 35.0% |
| !! | TAAGCTGTTTTGTCATTTCC+AGG | - | chr4.3:20176522-20176541 | None:intergenic | 35.0% |
| !! | TCTAGCTCCTCAAATTTTGA+TGG | - | chr4.3:20175686-20175705 | None:intergenic | 35.0% |
| !!! | ACAGGATTTTTTAATGCCCA+TGG | - | chr4.3:20176101-20176120 | None:intergenic | 35.0% |
| !!! | ATGTTTGGTTCCACTTTTTG+AGG | - | chr4.3:20175531-20175550 | None:intergenic | 35.0% |
| !!! | TCCATCTCCACTTATTTTAG+AGG | - | chr4.3:20174913-20174932 | None:intergenic | 35.0% |
| !!! | TCGGAATCAGGGTTTTAAAT+GGG | + | chr4.3:20176990-20177009 | MS.gene70378:intron | 35.0% |
| AAAACTTACGCCGTTCATGT+GGG | - | chr4.3:20174664-20174683 | None:intergenic | 40.0% | |
| AAAGAGACTGTATGAAGCCT+AGG | + | chr4.3:20176837-20176856 | MS.gene70378:intron | 40.0% | |
| AACCTCCTAATAACAGCAAC+AGG | - | chr4.3:20176119-20176138 | None:intergenic | 40.0% | |
| AACGTTGGAAAGCTTCAACT+TGG | - | chr4.3:20177698-20177717 | None:intergenic | 40.0% | |
| ATCATGGGATGAATAGCAGA+TGG | - | chr4.3:20176921-20176940 | None:intergenic | 40.0% | |
| ATCCAATGTCCACAAAAAGG+TGG | - | chr4.3:20176732-20176751 | None:intergenic | 40.0% | |
| ATGGAGGTCTACAAAAGTGA+TGG | + | chr4.3:20176161-20176180 | MS.gene70378:CDS | 40.0% | |
| CAGAAGCCTGTTGGAAAAAA+TGG | + | chr4.3:20174558-20174577 | MS.gene70378:CDS | 40.0% | |
| CTACTTACCTCCTCAAAAAG+TGG | + | chr4.3:20175518-20175537 | MS.gene70378:intron | 40.0% | |
| CTGCTATTCATCCCATGATA+TGG | + | chr4.3:20176922-20176941 | MS.gene70378:intron | 40.0% | |
| GAGATGTAGTAGGCAGTATT+CGG | - | chr4.3:20177226-20177245 | None:intergenic | 40.0% | |
| GATGAAGTAGCGAAAGAAGA+AGG | - | chr4.3:20174516-20174535 | None:intergenic | 40.0% | |
| GTCTCTTTATGTGGATCAGA+AGG | - | chr4.3:20176825-20176844 | None:intergenic | 40.0% | |
| GTGAACCTCCCTTAAAAATG+CGG | - | chr4.3:20177588-20177607 | None:intergenic | 40.0% | |
| GTTAGTATTAGACGGTTCCT+CGG | - | chr4.3:20177536-20177555 | None:intergenic | 40.0% | |
| TAAAACTTACGCCGTTCATG+TGG | - | chr4.3:20174665-20174684 | None:intergenic | 40.0% | |
| TAAAAGAAGCAGGCCTTCAT+GGG | + | chr4.3:20176138-20176157 | MS.gene70378:CDS | 40.0% | |
| TCCAATGTCCACAAAAAGGT+GGG | - | chr4.3:20176731-20176750 | None:intergenic | 40.0% | |
| TCTGACAGATCACGATACTA+TGG | + | chr4.3:20175073-20175092 | MS.gene70378:CDS | 40.0% | |
| TCTTGGCTACTTAACCAAAG+AGG | - | chr4.3:20177649-20177668 | None:intergenic | 40.0% | |
| TGAACCTCCCTTAAAAATGC+GGG | - | chr4.3:20177587-20177606 | None:intergenic | 40.0% | |
| TGTAGAACCAAACATGCACT+TGG | - | chr4.3:20175301-20175320 | None:intergenic | 40.0% | |
| TGTCACTCTAAATGCAGTGA+TGG | + | chr4.3:20174606-20174625 | MS.gene70378:CDS | 40.0% | |
| TTAAAAGAAGCAGGCCTTCA+TGG | + | chr4.3:20176137-20176156 | MS.gene70378:CDS | 40.0% | |
| TTAAGGTAGCTAGGCCTATA+TGG | + | chr4.3:20177476-20177495 | MS.gene70378:CDS | 40.0% | |
| TTCACCCTTGTATTGTGGAA+AGG | + | chr4.3:20177603-20177622 | MS.gene70378:CDS | 40.0% | |
| TTGGTTAAGTAGCCAAGAGA+TGG | + | chr4.3:20177651-20177670 | MS.gene70378:CDS | 40.0% | |
| ! | AGGTCTACAAAAGTGATGGA+AGG | + | chr4.3:20176165-20176184 | MS.gene70378:CDS | 40.0% |
| ! | ATCCTGTTGCTGTTATTAGG+AGG | + | chr4.3:20176114-20176133 | MS.gene70378:CDS | 40.0% |
| ! | ATTATTGGAGTGTTATGCCG+AGG | + | chr4.3:20177516-20177535 | MS.gene70378:CDS | 40.0% |
| ! | CATGCAAAACTAGTACTGGA+AGG | - | chr4.3:20177450-20177469 | None:intergenic | 40.0% |
| ! | CTGACCCTCCAATTTTCAAA+AGG | - | chr4.3:20177378-20177397 | None:intergenic | 40.0% |
| ! | GATGACCCATGAACAAGTTT+TGG | + | chr4.3:20174452-20174471 | MS.gene70378:CDS | 40.0% |
| ! | TCCAATTTTCAAAAGGCCGT+AGG | - | chr4.3:20177371-20177390 | None:intergenic | 40.0% |
| ! | TGGCTTTTTGTCTCCTTCTA+AGG | + | chr4.3:20174626-20174645 | MS.gene70378:CDS | 40.0% |
| !! | AAGTGCATGTTTGGTTCTAC+AGG | + | chr4.3:20175300-20175319 | MS.gene70378:intron | 40.0% |
| !! | ACGGCCTTTTGAAAATTGGA+GGG | + | chr4.3:20177371-20177390 | MS.gene70378:CDS | 40.0% |
| !! | AGTGCATGTTTGGTTCTACA+GGG | + | chr4.3:20175301-20175320 | MS.gene70378:intron | 40.0% |
| !! | GCAAGAAGCATCCATATCAT+GGG | - | chr4.3:20176936-20176955 | None:intergenic | 40.0% |
| !! | GCCTCTAAAATAAGTGGAGA+TGG | + | chr4.3:20174909-20174928 | MS.gene70378:intron | 40.0% |
| !! | GTAGAGGCCTCTAAAATAAG+TGG | + | chr4.3:20174903-20174922 | MS.gene70378:intron | 40.0% |
| !! | TACGGCCTTTTGAAAATTGG+AGG | + | chr4.3:20177370-20177389 | MS.gene70378:CDS | 40.0% |
| !!! | CGGAATCAGGGTTTTAAATG+GGG | + | chr4.3:20176991-20177010 | MS.gene70378:intron | 40.0% |
| !!! | CTCGGAATCAGGGTTTTAAA+TGG | + | chr4.3:20176989-20177008 | MS.gene70378:intron | 40.0% |
| !!! | CTGTCACCATTTTTTCCAAC+AGG | - | chr4.3:20174567-20174586 | None:intergenic | 40.0% |
| !!! | GGAATCAGGGTTTTAAATGG+GGG | + | chr4.3:20176992-20177011 | MS.gene70378:intron | 40.0% |
| !!! | TTTGGTTCCACTTTTTGAGG+AGG | - | chr4.3:20175528-20175547 | None:intergenic | 40.0% |
| AACCTGCTTCAACCATAGCA+CGG | - | chr4.3:20175856-20175875 | None:intergenic | 45.0% | |
| ACAGATCACGATACTATGGC+AGG | + | chr4.3:20175077-20175096 | MS.gene70378:CDS | 45.0% | |
| AGGACACCATGAATCTGAAC+TGG | + | chr4.3:20177414-20177433 | MS.gene70378:CDS | 45.0% | |
| ATTGGAGGGTCAGACTATCA+TGG | + | chr4.3:20177385-20177404 | MS.gene70378:CDS | 45.0% | |
| CACTTCCCAGTTCAGATTCA+TGG | - | chr4.3:20177423-20177442 | None:intergenic | 45.0% | |
| CCAATGTCCACAAAAAGGTG+GGG | - | chr4.3:20176730-20176749 | None:intergenic | 45.0% | |
| CTTGTGTTGCCTCTAACTAG+AGG | + | chr4.3:20175241-20175260 | MS.gene70378:intron | 45.0% | |
| GAGCATGTTTGTAGGATTGC+AGG | + | chr4.3:20175797-20175816 | MS.gene70378:CDS | 45.0% | |
| GCTCTCTCAACAACCTTAGA+AGG | - | chr4.3:20174642-20174661 | None:intergenic | 45.0% | |
| GGACACCATGAATCTGAACT+GGG | + | chr4.3:20177415-20177434 | MS.gene70378:CDS | 45.0% | |
| GTATGCAGCATATAGTGACC+TGG | + | chr4.3:20177339-20177358 | MS.gene70378:intron | 45.0% | |
| GTTTGTAGGATTGCAGGCAA+CGG | + | chr4.3:20175803-20175822 | MS.gene70378:CDS | 45.0% | |
| TATGGTCAACCACTAAGCCT+AGG | - | chr4.3:20176857-20176876 | None:intergenic | 45.0% | |
| TCAGACTATCATGGAAGAGG+AGG | + | chr4.3:20177394-20177413 | MS.gene70378:CDS | 45.0% | |
| TCCAACGTTTCTACCAGTCA+GGG | + | chr4.3:20177709-20177728 | MS.gene70378:CDS | 45.0% | |
| TCTGATGTTTGCCCATCTAC+TGG | + | chr4.3:20175596-20175615 | MS.gene70378:intron | 45.0% | |
| TGGGCAAACATCAGAACCAA+TGG | - | chr4.3:20175591-20175610 | None:intergenic | 45.0% | |
| TGTATGAAGCCTAGGCTTAG+TGG | + | chr4.3:20176845-20176864 | MS.gene70378:intron | 45.0% | |
| TGTTGCCTCTAACTAGAGGA+GGG | + | chr4.3:20175245-20175264 | MS.gene70378:intron | 45.0% | |
| TTCCAACGTTTCTACCAGTC+AGG | + | chr4.3:20177708-20177727 | MS.gene70378:CDS | 45.0% | |
| TTTAAGGATGGTGTGGCTGA+TGG | + | chr4.3:20174865-20174884 | MS.gene70378:intron | 45.0% | |
| TTTATTGCTTCCTCCACCAC+AGG | - | chr4.3:20176038-20176057 | None:intergenic | 45.0% | |
| ! | AAAAGTGATGGAAGGCTTGC+AGG | + | chr4.3:20176173-20176192 | MS.gene70378:CDS | 45.0% |
| ! | GCCCGATATCTTTTTGATGG+TGG | + | chr4.3:20175902-20175921 | MS.gene70378:CDS | 45.0% |
| ! | GGGAGAACCCGCATTTTTAA+GGG | + | chr4.3:20177577-20177596 | MS.gene70378:CDS | 45.0% |
| ! | TGGGAGAACCCGCATTTTTA+AGG | + | chr4.3:20177576-20177595 | MS.gene70378:CDS | 45.0% |
| !! | AGAACCCGCATTTTTAAGGG+AGG | + | chr4.3:20177580-20177599 | MS.gene70378:CDS | 45.0% |
| !! | ATGGTTAGCCTCTATCTCAC+CGG | - | chr4.3:20177155-20177174 | None:intergenic | 45.0% |
| !! | GCCTACGGCCTTTTGAAAAT+TGG | + | chr4.3:20177367-20177386 | MS.gene70378:CDS | 45.0% |
| !! | GGCAAGAAGCATCCATATCA+TGG | - | chr4.3:20176937-20176956 | None:intergenic | 45.0% |
| !! | GTAGAATCGGCTCGCAAATA+TGG | + | chr4.3:20175113-20175132 | MS.gene70378:CDS | 45.0% |
| AACGTTTCTACCAGTCAGGG+AGG | + | chr4.3:20177712-20177731 | MS.gene70378:CDS | 50.0% | |
| ACCTGCTTCAACCATAGCAC+GGG | - | chr4.3:20175855-20175874 | None:intergenic | 50.0% | |
| ACTCATCACTACCGCCAACT+TGG | + | chr4.3:20177124-20177143 | MS.gene70378:intron | 50.0% | |
| CTCATCACTACCGCCAACTT+GGG | + | chr4.3:20177125-20177144 | MS.gene70378:intron | 50.0% | |
| GGAGGTTCACCCTTGTATTG+TGG | + | chr4.3:20177598-20177617 | MS.gene70378:CDS | 50.0% | |
| GGGTCAGACTATCATGGAAG+AGG | + | chr4.3:20177391-20177410 | MS.gene70378:CDS | 50.0% | |
| GTGTTGCCTCTAACTAGAGG+AGG | + | chr4.3:20175244-20175263 | MS.gene70378:intron | 50.0% | |
| GTTGAGAGAGCCCACATGAA+CGG | + | chr4.3:20174651-20174670 | MS.gene70378:CDS | 50.0% | |
| GTTGCCTCTAACTAGAGGAG+GGG | + | chr4.3:20175246-20175265 | MS.gene70378:intron | 50.0% | |
| TCCCTGACTGGTAGAAACGT+TGG | - | chr4.3:20177713-20177732 | None:intergenic | 50.0% | |
| TGTAGACCTCCATCCCATGA+AGG | - | chr4.3:20176154-20176173 | None:intergenic | 50.0% | |
| TTGCCTCTAACTAGAGGAGG+GGG | + | chr4.3:20175247-20175266 | MS.gene70378:intron | 50.0% | |
| TTTCAGGGGAAGTGAACCTG+TGG | + | chr4.3:20176019-20176038 | MS.gene70378:intron | 50.0% | |
| ! | CCCCACCTTTTTGTGGACAT+TGG | + | chr4.3:20176727-20176746 | MS.gene70378:intron | 50.0% |
| ! | TGCACTACCCCACCTTTTTG+TGG | + | chr4.3:20176720-20176739 | MS.gene70378:intron | 50.0% |
| AGAAGCAGGCCTTCATGGGA+TGG | + | chr4.3:20176142-20176161 | MS.gene70378:CDS | 55.0% | |
| AGTGACCTGGCTGATGCCTA+CGG | + | chr4.3:20177352-20177371 | MS.gene70378:CDS | 55.0% | |
| CATCCCCGAGGCTGTAGAAT+CGG | + | chr4.3:20175100-20175119 | MS.gene70378:CDS | 55.0% | |
| CTCCACCACTGCCAGTAGAT+GGG | - | chr4.3:20175610-20175629 | None:intergenic | 55.0% | |
| GTTTGCCCATCTACTGGCAG+TGG | + | chr4.3:20175602-20175621 | MS.gene70378:intron | 55.0% | |
| TACCAGTCAGGGAGGAACTC+CGG | + | chr4.3:20177720-20177739 | MS.gene70378:CDS | 55.0% | |
| TCTCCACCACTGCCAGTAGA+TGG | - | chr4.3:20175611-20175630 | None:intergenic | 55.0% | |
| TGCCCATGGATGAGCCAGAA+CGG | - | chr4.3:20176087-20176106 | None:intergenic | 55.0% | |
| TGCCTCTAACTAGAGGAGGG+GGG | + | chr4.3:20175248-20175267 | MS.gene70378:intron | 55.0% | |
| TGGTGGAGACACTGAAGCAG+AGG | + | chr4.3:20175622-20175641 | MS.gene70378:CDS | 55.0% | |
| TTCCCCCCTCCTCTAGTTAG+AGG | - | chr4.3:20175253-20175272 | None:intergenic | 55.0% | |
| ! | CAACCATAGCACGGGCTACA+TGG | - | chr4.3:20175847-20175866 | None:intergenic | 55.0% |
| ! | TTTGGGGTGCAGAAGCCTGT+TGG | + | chr4.3:20174549-20174568 | MS.gene70378:CDS | 55.0% |
| !! | TGCCGTTCTGGCTCATCCAT+GGG | + | chr4.3:20176082-20176101 | MS.gene70378:CDS | 55.0% |
| !! | TTGCCGTTCTGGCTCATCCA+TGG | + | chr4.3:20176081-20176100 | MS.gene70378:CDS | 55.0% |
| AAAGGCCGTAGGCATCAGCC+AGG | - | chr4.3:20177360-20177379 | None:intergenic | 60.0% | |
| AACCGGAGTTCCTCCCTGAC+TGG | - | chr4.3:20177725-20177744 | None:intergenic | 60.0% | |
| AGCAGGCCTTCATGGGATGG+AGG | + | chr4.3:20176145-20176164 | MS.gene70378:CDS | 60.0% | |
| CAGGGGAAGTGAACCTGTGG+TGG | + | chr4.3:20176022-20176041 | MS.gene70378:intron | 60.0% | |
| GCCCGTGCTATGGTTGAAGC+AGG | + | chr4.3:20175851-20175870 | MS.gene70378:CDS | 60.0% | |
| GCTCCATGTAGCCCGTGCTA+TGG | + | chr4.3:20175841-20175860 | MS.gene70378:CDS | 60.0% | |
| GGGAAGTGAACCTGTGGTGG+AGG | + | chr4.3:20176025-20176044 | MS.gene70378:CDS | 60.0% | |
| TACTATGGCAGGCATCCCCG+AGG | + | chr4.3:20175088-20175107 | MS.gene70378:CDS | 60.0% | |
| TGCCCATCTACTGGCAGTGG+TGG | + | chr4.3:20175605-20175624 | MS.gene70378:intron | 60.0% | |
| ! | ACGGGCTACATGGAGCCTTC+CGG | - | chr4.3:20175837-20175856 | None:intergenic | 60.0% |
| ! | CGAGCCGATTCTACAGCCTC+GGG | - | chr4.3:20175107-20175126 | None:intergenic | 60.0% |
| ! | GAGCCGATTCTACAGCCTCG+GGG | - | chr4.3:20175106-20175125 | None:intergenic | 60.0% |
| ! | GCGAGCCGATTCTACAGCCT+CGG | - | chr4.3:20175108-20175127 | None:intergenic | 60.0% |
| ! | TCTCACCGGCTAGCCCAAGT+TGG | - | chr4.3:20177141-20177160 | None:intergenic | 60.0% |
| !! | TACCGCCAACTTGGGCTAGC+CGG | + | chr4.3:20177133-20177152 | MS.gene70378:intron | 60.0% |
| !! | TACTGGGGGTGTTGCCGTTC+TGG | + | chr4.3:20176070-20176089 | MS.gene70378:CDS | 60.0% |
| !! | TGGGCTAGCCGGTGAGATAG+AGG | + | chr4.3:20177144-20177163 | MS.gene70378:intron | 60.0% |
| CGGGCTACATGGAGCCTTCC+GGG | - | chr4.3:20175836-20175855 | None:intergenic | 65.0% | |
| GCAACGGAGTTGCTCCCGGA+AGG | + | chr4.3:20175819-20175838 | MS.gene70378:CDS | 65.0% | |
| GCAGGCAACGGAGTTGCTCC+CGG | + | chr4.3:20175815-20175834 | MS.gene70378:CDS | 65.0% | |
| ! | CACCGGCTAGCCCAAGTTGG+CGG | - | chr4.3:20177138-20177157 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 20174348 | 20177759 | 20174348 | ID=MS.gene70378 |
| chr4.3 | mRNA | 20174348 | 20177759 | 20174348 | ID=MS.gene70378.t1;Parent=MS.gene70378 |
| chr4.3 | exon | 20174348 | 20174674 | 20174348 | ID=MS.gene70378.t1.exon1;Parent=MS.gene70378.t1 |
| chr4.3 | CDS | 20174348 | 20174674 | 20174348 | ID=cds.MS.gene70378.t1;Parent=MS.gene70378.t1 |
| chr4.3 | exon | 20175059 | 20175183 | 20175059 | ID=MS.gene70378.t1.exon2;Parent=MS.gene70378.t1 |
| chr4.3 | CDS | 20175059 | 20175183 | 20175059 | ID=cds.MS.gene70378.t1;Parent=MS.gene70378.t1 |
| chr4.3 | exon | 20175622 | 20175939 | 20175622 | ID=MS.gene70378.t1.exon3;Parent=MS.gene70378.t1 |
| chr4.3 | CDS | 20175622 | 20175939 | 20175622 | ID=cds.MS.gene70378.t1;Parent=MS.gene70378.t1 |
| chr4.3 | exon | 20176025 | 20176194 | 20176025 | ID=MS.gene70378.t1.exon4;Parent=MS.gene70378.t1 |
| chr4.3 | CDS | 20176025 | 20176194 | 20176025 | ID=cds.MS.gene70378.t1;Parent=MS.gene70378.t1 |
| chr4.3 | exon | 20177347 | 20177759 | 20177347 | ID=MS.gene70378.t1.exon5;Parent=MS.gene70378.t1 |
| chr4.3 | CDS | 20177347 | 20177759 | 20177347 | ID=cds.MS.gene70378.t1;Parent=MS.gene70378.t1 |
| Gene Sequence |
| Protein sequence |
