Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32688.t1 | XP_024635413.1 | 99.3 | 275 | 2 | 0 | 1 | 275 | 1 | 275 | 8.70E-160 | 572.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32688.t1 | Q9SKZ2 | 78.0 | 264 | 57 | 1 | 10 | 272 | 6 | 269 | 9.5e-123 | 441.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32688.t1 | B7FJ18 | 99.3 | 275 | 2 | 0 | 1 | 275 | 1 | 275 | 6.3e-160 | 572.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049142 | MS.gene32688 | 0.845224 | 4.64E-59 | -1.69E-46 |
MS.gene04918 | MS.gene32688 | 0.839675 | 1.37E-57 | -1.69E-46 |
MS.gene04919 | MS.gene32688 | 0.830589 | 2.70E-55 | -1.69E-46 |
MS.gene04920 | MS.gene32688 | 0.834083 | 3.68E-56 | -1.69E-46 |
MS.gene049254 | MS.gene32688 | 0.813983 | 1.94E-51 | -1.69E-46 |
MS.gene049283 | MS.gene32688 | 0.866095 | 3.66E-65 | -1.69E-46 |
MS.gene049350 | MS.gene32688 | 0.835509 | 1.61E-56 | -1.69E-46 |
MS.gene049368 | MS.gene32688 | 0.855553 | 5.84E-62 | -1.69E-46 |
MS.gene049411 | MS.gene32688 | 0.815068 | 1.12E-51 | -1.69E-46 |
MS.gene049499 | MS.gene32688 | 0.849524 | 3.06E-60 | -1.69E-46 |
MS.gene049680 | MS.gene32688 | 0.816515 | 5.32E-52 | -1.69E-46 |
MS.gene049711 | MS.gene32688 | 0.855443 | 6.29E-62 | -1.69E-46 |
MS.gene049807 | MS.gene32688 | 0.897548 | 1.26E-76 | -1.69E-46 |
MS.gene049983 | MS.gene32688 | 0.853203 | 2.79E-61 | -1.69E-46 |
MS.gene04998 | MS.gene32688 | 0.852316 | 5.00E-61 | -1.69E-46 |
MS.gene050359 | MS.gene32688 | 0.855224 | 7.28E-62 | -1.69E-46 |
MS.gene05035 | MS.gene32688 | 0.807265 | 5.50E-50 | -1.69E-46 |
MS.gene050384 | MS.gene32688 | 0.813882 | 2.04E-51 | -1.69E-46 |
MS.gene050386 | MS.gene32688 | 0.808623 | 2.83E-50 | -1.69E-46 |
MS.gene050414 | MS.gene32688 | 0.878774 | 2.14E-69 | -1.69E-46 |
MS.gene050551 | MS.gene32688 | 0.816302 | 5.93E-52 | -1.69E-46 |
MS.gene050559 | MS.gene32688 | 0.842198 | 2.99E-58 | -1.69E-46 |
MS.gene050561 | MS.gene32688 | 0.831078 | 2.05E-55 | -1.69E-46 |
MS.gene050562 | MS.gene32688 | 0.833176 | 6.20E-56 | -1.69E-46 |
MS.gene050646 | MS.gene32688 | 0.887251 | 1.68E-72 | -1.69E-46 |
MS.gene050654 | MS.gene32688 | 0.836094 | 1.14E-56 | -1.69E-46 |
MS.gene050689 | MS.gene32688 | 0.82971 | 4.42E-55 | -1.69E-46 |
MS.gene050752 | MS.gene32688 | 0.832808 | 7.65E-56 | -1.69E-46 |
MS.gene050838 | MS.gene32688 | 0.829754 | 4.31E-55 | -1.69E-46 |
MS.gene050931 | MS.gene32688 | 0.82941 | 5.23E-55 | -1.69E-46 |
MS.gene050945 | MS.gene32688 | 0.896411 | 3.79E-76 | -1.69E-46 |
MS.gene050955 | MS.gene32688 | 0.817728 | 2.84E-52 | -1.69E-46 |
MS.gene051003 | MS.gene32688 | 0.839923 | 1.19E-57 | -1.69E-46 |
MS.gene051019 | MS.gene32688 | 0.816078 | 6.66E-52 | -1.69E-46 |
MS.gene051043 | MS.gene32688 | 0.888794 | 4.30E-73 | -1.69E-46 |
MS.gene051201 | MS.gene32688 | 0.83455 | 2.81E-56 | -1.69E-46 |
MS.gene051226 | MS.gene32688 | 0.820158 | 7.95E-53 | -1.69E-46 |
MS.gene051234 | MS.gene32688 | 0.888533 | 5.43E-73 | -1.69E-46 |
MS.gene051279 | MS.gene32688 | 0.828465 | 8.86E-55 | -1.69E-46 |
MS.gene051343 | MS.gene32688 | 0.862739 | 4.09E-64 | -1.69E-46 |
MS.gene051365 | MS.gene32688 | 0.804008 | 2.65E-49 | -1.69E-46 |
MS.gene051381 | MS.gene32688 | 0.811398 | 7.14E-51 | -1.69E-46 |
MS.gene051450 | MS.gene32688 | 0.812047 | 5.16E-51 | -1.69E-46 |
MS.gene051628 | MS.gene32688 | 0.819573 | 1.08E-52 | -1.69E-46 |
MS.gene051642 | MS.gene32688 | 0.818099 | 2.34E-52 | -1.69E-46 |
MS.gene051676 | MS.gene32688 | 0.84755 | 1.08E-59 | -1.69E-46 |
MS.gene051699 | MS.gene32688 | 0.869513 | 2.93E-66 | -1.69E-46 |
MS.gene051724 | MS.gene32688 | 0.80127 | 9.74E-49 | -1.69E-46 |
MS.gene051744 | MS.gene32688 | 0.824032 | 1.01E-53 | -1.69E-46 |
MS.gene051832 | MS.gene32688 | 0.803444 | 3.48E-49 | -1.69E-46 |
MS.gene051852 | MS.gene32688 | 0.836385 | 9.65E-57 | -1.69E-46 |
MS.gene051856 | MS.gene32688 | 0.801641 | 8.18E-49 | -1.69E-46 |
MS.gene051902 | MS.gene32688 | 0.845429 | 4.08E-59 | -1.69E-46 |
MS.gene051975 | MS.gene32688 | 0.828802 | 7.34E-55 | -1.69E-46 |
MS.gene052016 | MS.gene32688 | 0.851554 | 8.23E-61 | -1.69E-46 |
MS.gene052072 | MS.gene32688 | 0.889456 | 2.38E-73 | -1.69E-46 |
MS.gene052118 | MS.gene32688 | 0.808268 | 3.37E-50 | -1.69E-46 |
MS.gene052239 | MS.gene32688 | -0.85544 | 6.30E-62 | -1.69E-46 |
MS.gene052242 | MS.gene32688 | -0.849966 | 2.30E-60 | -1.69E-46 |
MS.gene052296 | MS.gene32688 | 0.830494 | 2.84E-55 | -1.69E-46 |
MS.gene052307 | MS.gene32688 | 0.89718 | 1.80E-76 | -1.69E-46 |
MS.gene052335 | MS.gene32688 | 0.846569 | 2.00E-59 | -1.69E-46 |
MS.gene052342 | MS.gene32688 | 0.822406 | 2.41E-53 | -1.69E-46 |
MS.gene052463 | MS.gene32688 | 0.854814 | 9.58E-62 | -1.69E-46 |
MS.gene052514 | MS.gene32688 | 0.820422 | 6.92E-53 | -1.69E-46 |
MS.gene052516 | MS.gene32688 | 0.832849 | 7.48E-56 | -1.69E-46 |
MS.gene052533 | MS.gene32688 | 0.907765 | 3.56E-81 | -1.69E-46 |
MS.gene052609 | MS.gene32688 | 0.888452 | 5.83E-73 | -1.69E-46 |
MS.gene052793 | MS.gene32688 | 0.850562 | 1.57E-60 | -1.69E-46 |
MS.gene052932 | MS.gene32688 | 0.842746 | 2.14E-58 | -1.69E-46 |
MS.gene053058 | MS.gene32688 | 0.809128 | 2.20E-50 | -1.69E-46 |
MS.gene053079 | MS.gene32688 | 0.836506 | 8.99E-57 | -1.69E-46 |
MS.gene053143 | MS.gene32688 | 0.874595 | 5.98E-68 | -1.69E-46 |
MS.gene053272 | MS.gene32688 | -0.845165 | 4.81E-59 | -1.69E-46 |
MS.gene053298 | MS.gene32688 | 0.809787 | 1.59E-50 | -1.69E-46 |
MS.gene053456 | MS.gene32688 | 0.815984 | 6.99E-52 | -1.69E-46 |
MS.gene05350 | MS.gene32688 | 0.813297 | 2.75E-51 | -1.69E-46 |
MS.gene053564 | MS.gene32688 | 0.80061 | 1.33E-48 | -1.69E-46 |
MS.gene053575 | MS.gene32688 | 0.8229 | 1.85E-53 | -1.69E-46 |
MS.gene053581 | MS.gene32688 | 0.808768 | 2.63E-50 | -1.69E-46 |
MS.gene053620 | MS.gene32688 | 0.8115 | 6.79E-51 | -1.69E-46 |
MS.gene05364 | MS.gene32688 | 0.836865 | 7.28E-57 | -1.69E-46 |
MS.gene053879 | MS.gene32688 | 0.858761 | 6.60E-63 | -1.69E-46 |
MS.gene053931 | MS.gene32688 | 0.827105 | 1.88E-54 | -1.69E-46 |
MS.gene053963 | MS.gene32688 | 0.811056 | 8.47E-51 | -1.69E-46 |
MS.gene054004 | MS.gene32688 | 0.845206 | 4.69E-59 | -1.69E-46 |
MS.gene054142 | MS.gene32688 | 0.812245 | 4.67E-51 | -1.69E-46 |
MS.gene054178 | MS.gene32688 | 0.883313 | 4.99E-71 | -1.69E-46 |
MS.gene054222 | MS.gene32688 | 0.837689 | 4.48E-57 | -1.69E-46 |
MS.gene054403 | MS.gene32688 | 0.836035 | 1.18E-56 | -1.69E-46 |
MS.gene054413 | MS.gene32688 | 0.857659 | 1.40E-62 | -1.69E-46 |
MS.gene05458 | MS.gene32688 | 0.816685 | 4.87E-52 | -1.69E-46 |
MS.gene054617 | MS.gene32688 | 0.801179 | 1.02E-48 | -1.69E-46 |
MS.gene054651 | MS.gene32688 | 0.82005 | 8.42E-53 | -1.69E-46 |
MS.gene05469 | MS.gene32688 | 0.802378 | 5.77E-49 | -1.69E-46 |
MS.gene054709 | MS.gene32688 | 0.847903 | 8.61E-60 | -1.69E-46 |
MS.gene054824 | MS.gene32688 | 0.806299 | 8.80E-50 | -1.69E-46 |
MS.gene054892 | MS.gene32688 | 0.869358 | 3.29E-66 | -1.69E-46 |
MS.gene054893 | MS.gene32688 | 0.872712 | 2.58E-67 | -1.69E-46 |
MS.gene054957 | MS.gene32688 | 0.817744 | 2.81E-52 | -1.69E-46 |
MS.gene055141 | MS.gene32688 | 0.815766 | 7.81E-52 | -1.69E-46 |
MS.gene055150 | MS.gene32688 | 0.829907 | 3.96E-55 | -1.69E-46 |
MS.gene055220 | MS.gene32688 | 0.805218 | 1.48E-49 | -1.69E-46 |
MS.gene055221 | MS.gene32688 | 0.827856 | 1.24E-54 | -1.69E-46 |
MS.gene055229 | MS.gene32688 | 0.847717 | 9.69E-60 | -1.69E-46 |
MS.gene055313 | MS.gene32688 | 0.802299 | 5.99E-49 | -1.69E-46 |
MS.gene055386 | MS.gene32688 | 0.816437 | 5.53E-52 | -1.69E-46 |
MS.gene05538 | MS.gene32688 | 0.802622 | 5.14E-49 | -1.69E-46 |
MS.gene05539 | MS.gene32688 | 0.813356 | 2.67E-51 | -1.69E-46 |
MS.gene055513 | MS.gene32688 | 0.863195 | 2.96E-64 | -1.69E-46 |
MS.gene055724 | MS.gene32688 | 0.804318 | 2.29E-49 | -1.69E-46 |
MS.gene055864 | MS.gene32688 | 0.808256 | 3.39E-50 | -1.69E-46 |
MS.gene056045 | MS.gene32688 | 0.822109 | 2.82E-53 | -1.69E-46 |
MS.gene056082 | MS.gene32688 | 0.844075 | 9.46E-59 | -1.69E-46 |
MS.gene056097 | MS.gene32688 | 0.809574 | 1.77E-50 | -1.69E-46 |
MS.gene056181 | MS.gene32688 | 0.826497 | 2.63E-54 | -1.69E-46 |
MS.gene056308 | MS.gene32688 | 0.834423 | 3.02E-56 | -1.69E-46 |
MS.gene056363 | MS.gene32688 | 0.814317 | 1.64E-51 | -1.69E-46 |
MS.gene056390 | MS.gene32688 | 0.817214 | 3.70E-52 | -1.69E-46 |
MS.gene056507 | MS.gene32688 | 0.811223 | 7.80E-51 | -1.69E-46 |
MS.gene056519 | MS.gene32688 | 0.804644 | 1.96E-49 | -1.69E-46 |
MS.gene056578 | MS.gene32688 | 0.823152 | 1.62E-53 | -1.69E-46 |
MS.gene056677 | MS.gene32688 | 0.87119 | 8.25E-67 | -1.69E-46 |
MS.gene056699 | MS.gene32688 | 0.878537 | 2.59E-69 | -1.69E-46 |
MS.gene05686 | MS.gene32688 | 0.861768 | 8.13E-64 | -1.69E-46 |
MS.gene056881 | MS.gene32688 | 0.834058 | 3.73E-56 | -1.69E-46 |
MS.gene056973 | MS.gene32688 | 0.808541 | 2.94E-50 | -1.69E-46 |
MS.gene056986 | MS.gene32688 | 0.808629 | 2.82E-50 | -1.69E-46 |
MS.gene057034 | MS.gene32688 | 0.823131 | 1.63E-53 | -1.69E-46 |
MS.gene057102 | MS.gene32688 | 0.913906 | 3.57E-84 | -1.69E-46 |
MS.gene057155 | MS.gene32688 | 0.805409 | 1.35E-49 | -1.69E-46 |
MS.gene057174 | MS.gene32688 | 0.82925 | 5.72E-55 | -1.69E-46 |
MS.gene057208 | MS.gene32688 | 0.838952 | 2.12E-57 | -1.69E-46 |
MS.gene057371 | MS.gene32688 | 0.813422 | 2.58E-51 | -1.69E-46 |
MS.gene057622 | MS.gene32688 | 0.815219 | 1.03E-51 | -1.69E-46 |
MS.gene057890 | MS.gene32688 | -0.80719 | 5.71E-50 | -1.69E-46 |
MS.gene057919 | MS.gene32688 | 0.836884 | 7.20E-57 | -1.69E-46 |
MS.gene057999 | MS.gene32688 | 0.815979 | 7.01E-52 | -1.69E-46 |
MS.gene058008 | MS.gene32688 | 0.832043 | 1.18E-55 | -1.69E-46 |
MS.gene058009 | MS.gene32688 | 0.800778 | 1.23E-48 | -1.69E-46 |
MS.gene058074 | MS.gene32688 | 0.802817 | 4.69E-49 | -1.69E-46 |
MS.gene058095 | MS.gene32688 | 0.817542 | 3.12E-52 | -1.69E-46 |
MS.gene058149 | MS.gene32688 | 0.855139 | 7.71E-62 | -1.69E-46 |
MS.gene058159 | MS.gene32688 | 0.861641 | 8.89E-64 | -1.69E-46 |
MS.gene058261 | MS.gene32688 | 0.831109 | 2.01E-55 | -1.69E-46 |
MS.gene058279 | MS.gene32688 | 0.82631 | 2.91E-54 | -1.69E-46 |
MS.gene058289 | MS.gene32688 | 0.802784 | 4.76E-49 | -1.69E-46 |
MS.gene058292 | MS.gene32688 | 0.802308 | 5.97E-49 | -1.69E-46 |
MS.gene058330 | MS.gene32688 | 0.841016 | 6.13E-58 | -1.69E-46 |
MS.gene058355 | MS.gene32688 | 0.81319 | 2.90E-51 | -1.69E-46 |
MS.gene058492 | MS.gene32688 | 0.816601 | 5.09E-52 | -1.69E-46 |
MS.gene058592 | MS.gene32688 | 0.83892 | 2.16E-57 | -1.69E-46 |
MS.gene058649 | MS.gene32688 | 0.803793 | 2.94E-49 | -1.69E-46 |
MS.gene058781 | MS.gene32688 | 0.837088 | 6.39E-57 | -1.69E-46 |
MS.gene05878 | MS.gene32688 | 0.815704 | 8.07E-52 | -1.69E-46 |
MS.gene059007 | MS.gene32688 | 0.811013 | 8.66E-51 | -1.69E-46 |
MS.gene059144 | MS.gene32688 | 0.80629 | 8.84E-50 | -1.69E-46 |
MS.gene059145 | MS.gene32688 | 0.808369 | 3.20E-50 | -1.69E-46 |
MS.gene059146 | MS.gene32688 | 0.848997 | 4.29E-60 | -1.69E-46 |
MS.gene059170 | MS.gene32688 | 0.851013 | 1.17E-60 | -1.69E-46 |
MS.gene059227 | MS.gene32688 | 0.8403 | 9.45E-58 | -1.69E-46 |
MS.gene05952 | MS.gene32688 | 0.853554 | 2.21E-61 | -1.69E-46 |
MS.gene059634 | MS.gene32688 | 0.803625 | 3.19E-49 | -1.69E-46 |
MS.gene059774 | MS.gene32688 | 0.831684 | 1.45E-55 | -1.69E-46 |
MS.gene059778 | MS.gene32688 | 0.857584 | 1.48E-62 | -1.69E-46 |
MS.gene05985 | MS.gene32688 | -0.908443 | 1.70E-81 | -1.69E-46 |
MS.gene059901 | MS.gene32688 | -0.803929 | 2.76E-49 | -1.69E-46 |
MS.gene059965 | MS.gene32688 | 0.867617 | 1.20E-65 | -1.69E-46 |
MS.gene060244 | MS.gene32688 | 0.83119 | 1.92E-55 | -1.69E-46 |
MS.gene060259 | MS.gene32688 | 0.855798 | 4.95E-62 | -1.69E-46 |
MS.gene060342 | MS.gene32688 | -0.805083 | 1.58E-49 | -1.69E-46 |
MS.gene060343 | MS.gene32688 | -0.833618 | 4.81E-56 | -1.69E-46 |
MS.gene060365 | MS.gene32688 | 0.827786 | 1.29E-54 | -1.69E-46 |
MS.gene060435 | MS.gene32688 | 0.800025 | 1.75E-48 | -1.69E-46 |
MS.gene060522 | MS.gene32688 | 0.815866 | 7.42E-52 | -1.69E-46 |
MS.gene060525 | MS.gene32688 | 0.8329 | 7.26E-56 | -1.69E-46 |
MS.gene060697 | MS.gene32688 | 0.829034 | 6.45E-55 | -1.69E-46 |
MS.gene060763 | MS.gene32688 | 0.813935 | 1.99E-51 | -1.69E-46 |
MS.gene060777 | MS.gene32688 | 0.821641 | 3.62E-53 | -1.69E-46 |
MS.gene060840 | MS.gene32688 | 0.802239 | 6.17E-49 | -1.69E-46 |
MS.gene060932 | MS.gene32688 | 0.826411 | 2.75E-54 | -1.69E-46 |
MS.gene060933 | MS.gene32688 | 0.886581 | 3.02E-72 | -1.69E-46 |
MS.gene060935 | MS.gene32688 | 0.873621 | 1.28E-67 | -1.69E-46 |
MS.gene060937 | MS.gene32688 | 0.896727 | 2.79E-76 | -1.69E-46 |
MS.gene061100 | MS.gene32688 | 0.902436 | 9.71E-79 | -1.69E-46 |
MS.gene061160 | MS.gene32688 | 0.859846 | 3.12E-63 | -1.69E-46 |
MS.gene061188 | MS.gene32688 | 0.861059 | 1.34E-63 | -1.69E-46 |
MS.gene061243 | MS.gene32688 | 0.807157 | 5.80E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32688.t1 | AT2G32070 | 78.030 | 264 | 57 | 1 | 10 | 272 | 6 | 269 | 8.23e-155 | 432 |
MS.gene32688.t1 | AT1G80780 | 77.567 | 263 | 59 | 0 | 10 | 272 | 6 | 268 | 6.29e-154 | 430 |
MS.gene32688.t1 | AT1G80780 | 77.567 | 263 | 59 | 0 | 10 | 272 | 6 | 268 | 6.29e-154 | 430 |
MS.gene32688.t1 | AT1G80780 | 77.567 | 263 | 59 | 0 | 10 | 272 | 6 | 268 | 6.67e-154 | 431 |
MS.gene32688.t1 | AT5G10960 | 76.806 | 263 | 61 | 0 | 10 | 272 | 6 | 268 | 6.14e-153 | 428 |
MS.gene32688.t1 | AT1G15920 | 61.091 | 275 | 101 | 1 | 1 | 269 | 1 | 275 | 9.35e-120 | 344 |
MS.gene32688.t1 | AT1G15920 | 61.091 | 275 | 101 | 1 | 1 | 269 | 1 | 275 | 9.35e-120 | 344 |
MS.gene32688.t1 | AT3G44260 | 53.846 | 273 | 118 | 7 | 6 | 271 | 8 | 279 | 2.09e-92 | 275 |
MS.gene32688.t1 | AT5G22250 | 52.985 | 268 | 118 | 6 | 12 | 271 | 10 | 277 | 4.12e-89 | 266 |
MS.gene32688.t1 | AT1G06450 | 36.680 | 259 | 146 | 7 | 17 | 270 | 10 | 255 | 2.38e-45 | 156 |
MS.gene32688.t1 | AT1G61470 | 35.743 | 249 | 140 | 6 | 18 | 260 | 4 | 238 | 3.56e-37 | 133 |
MS.gene32688.t1 | AT3G44240 | 37.719 | 228 | 128 | 6 | 30 | 254 | 3 | 219 | 9.04e-36 | 128 |
MS.gene32688.t1 | AT1G27820 | 32.806 | 253 | 154 | 6 | 18 | 265 | 8 | 249 | 4.39e-31 | 117 |
MS.gene32688.t1 | AT1G27890 | 33.468 | 248 | 149 | 6 | 18 | 260 | 3 | 239 | 1.80e-28 | 110 |
Find 0 sgRNAs with CRISPR-Local
Find 58 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATACTTATCAACAATTTCA+CGG | + | 24279:17856-17875 | None:intergenic | 20.0% |
! | TGTTTGATATCATACACAAT+CGG | + | 24279:18358-18377 | None:intergenic | 25.0% |
!! | GTTGAATGATAATGTTCATT+GGG | - | 24279:18225-18244 | MS.gene32688:CDS | 25.0% |
!! | TGTTGAATGATAATGTTCAT+TGG | - | 24279:18224-18243 | MS.gene32688:CDS | 25.0% |
!!! | TTAACTTTTTCTGATGAGAA+TGG | - | 24279:18007-18026 | MS.gene32688:CDS | 25.0% |
!!! | TTTTAACTATCAGACTTTGA+AGG | - | 24279:17949-17968 | MS.gene32688:CDS | 25.0% |
AAATATTCTGGTGTGTTGTA+TGG | - | 24279:18541-18560 | MS.gene32688:CDS | 30.0% | |
ATATGCTTAAAATTCCCAAC+AGG | + | 24279:17923-17942 | None:intergenic | 30.0% | |
ATTATCATTCAACACAATCC+CGG | + | 24279:18218-18237 | None:intergenic | 30.0% | |
GTTTGATATCATACACAATC+GGG | + | 24279:18357-18376 | None:intergenic | 30.0% | |
TAAGTATAACTATGTTGCGA+TGG | - | 24279:17868-17887 | MS.gene32688:CDS | 30.0% | |
TCTTAAAATCAATTCCGCAT+TGG | + | 24279:18141-18160 | None:intergenic | 30.0% | |
TTAACGAAGGATTTACAGAA+AGG | - | 24279:17770-17789 | MS.gene32688:CDS | 30.0% | |
TTGTACATTTAGGAAGTTGA+GGG | - | 24279:18492-18511 | MS.gene32688:CDS | 30.0% | |
! | TTTCACAGTGGTTATGATTT+TGG | - | 24279:18253-18272 | MS.gene32688:CDS | 30.0% |
AAAAATCCAGCTTGTGTATC+CGG | + | 24279:18313-18332 | None:intergenic | 35.0% | |
AAATTGAATTGCCAGATGCA+AGG | + | 24279:18061-18080 | None:intergenic | 35.0% | |
AAGTTCTGTAACAGTCTTCA+TGG | - | 24279:18385-18404 | MS.gene32688:CDS | 35.0% | |
AATGGAAATTTACCTACCTG+TGG | - | 24279:18025-18044 | MS.gene32688:CDS | 35.0% | |
AGATTCGATTCAAATCAGAG+AGG | - | 24279:17793-17812 | MS.gene32688:CDS | 35.0% | |
CTTGTACATTTAGGAAGTTG+AGG | - | 24279:18491-18510 | MS.gene32688:CDS | 35.0% | |
TACTCACAGCTTGTACATTT+AGG | - | 24279:18482-18501 | MS.gene32688:CDS | 35.0% | |
TTGAGGGAAACATTCTTCAA+CGG | - | 24279:18508-18527 | MS.gene32688:CDS | 35.0% | |
! | ATGTTGAAGCTGATTCAGTT+AGG | - | 24279:17983-18002 | MS.gene32688:CDS | 35.0% |
!! | CTGGATTTTTCGATTTGATC+GGG | - | 24279:18323-18342 | MS.gene32688:CDS | 35.0% |
!! | GCTGGATTTTTCGATTTGAT+CGG | - | 24279:18322-18341 | MS.gene32688:CDS | 35.0% |
ATGGAACGATAATCTGGAAG+AGG | - | 24279:17817-17836 | MS.gene32688:CDS | 40.0% | |
CGATTCAAATCAGAGAGGTA+TGG | - | 24279:17798-17817 | MS.gene32688:CDS | 40.0% | |
GGCGAAACAGAGAAATATTC+TGG | - | 24279:18529-18548 | MS.gene32688:CDS | 40.0% | |
TCTGGTGTGTTGTATGGATT+AGG | - | 24279:18547-18566 | MS.gene32688:CDS | 40.0% | |
TTCTGTAACAGTCTTCATGG+TGG | - | 24279:18388-18407 | MS.gene32688:CDS | 40.0% | |
TTTAAGAAGAACAGCGAGCA+AGG | - | 24279:18154-18173 | MS.gene32688:CDS | 40.0% | |
! | AGAGGTATGGAACGATAATC+TGG | - | 24279:17811-17830 | MS.gene32688:CDS | 40.0% |
!! | AGTTTCCTGGTGTTGTTCTT+CGG | - | 24279:17897-17916 | MS.gene32688:CDS | 40.0% |
!! | TTTGAAGCTTTTGACGTGCA+GGG | - | 24279:18282-18301 | MS.gene32688:CDS | 40.0% |
!!! | CATTGGGTTACTTTTCACAG+TGG | - | 24279:18241-18260 | MS.gene32688:CDS | 40.0% |
!!! | TTTTGAAGCTTTTGACGTGC+AGG | - | 24279:18281-18300 | MS.gene32688:CDS | 40.0% |
AACTATCCGATCCAGCTTGA+TGG | + | 24279:18462-18481 | None:intergenic | 45.0% | |
GAGAACTTCTGATGTCATCC+GGG | - | 24279:18197-18216 | MS.gene32688:CDS | 45.0% | |
GGAATCGACGTGAACAGATT+TGG | - | 24279:18175-18194 | MS.gene32688:CDS | 45.0% | |
GGAATTGCTGGAAGTTGAGA+GGG | - | 24279:18426-18445 | MS.gene32688:CDS | 45.0% | |
GGAGAACTTCTGATGTCATC+CGG | - | 24279:18196-18215 | MS.gene32688:CDS | 45.0% | |
TGGTGGTTTGAACAAGCTTG+CGG | - | 24279:18405-18424 | MS.gene32688:CDS | 45.0% | |
CGGAATTGCTGGAAGTTGAG+AGG | - | 24279:18425-18444 | MS.gene32688:CDS | 50.0% | |
GAACAAGCTTGCGGAATTGC+TGG | - | 24279:18414-18433 | MS.gene32688:CDS | 50.0% | |
GCGATGGATACAGAGTTTCC+TGG | - | 24279:17884-17903 | MS.gene32688:CDS | 50.0% | |
TGTGTGCCATCAAGCTGGAT+CGG | - | 24279:18453-18472 | MS.gene32688:CDS | 50.0% | |
TTGCTGGAAGTTGAGAGGGT+TGG | - | 24279:18430-18449 | MS.gene32688:CDS | 50.0% | |
! | ATCGAGCTTTTGCGCCAATG+CGG | - | 24279:18124-18143 | MS.gene32688:CDS | 50.0% |
! | GCACTGATAGTCCTTGCATC+TGG | - | 24279:18047-18066 | MS.gene32688:CDS | 50.0% |
! | GTGTTGTTCTTCGGCCTGTT+GGG | - | 24279:17906-17925 | MS.gene32688:CDS | 50.0% |
ACAGGCCGAAGAACAACACC+AGG | + | 24279:17905-17924 | None:intergenic | 55.0% | |
GCAAGGACTATCAGTGCCAC+AGG | + | 24279:18044-18063 | None:intergenic | 55.0% | |
GCTTTGCCGGATACACAAGC+TGG | - | 24279:18304-18323 | MS.gene32688:CDS | 55.0% | |
GGACTATCAGTGCCACAGGT+AGG | + | 24279:18040-18059 | None:intergenic | 55.0% | |
GTTGGTGTGTGCCATCAAGC+TGG | - | 24279:18448-18467 | MS.gene32688:CDS | 55.0% | |
TTTGACGTGCAGGGCTTTGC+CGG | - | 24279:18291-18310 | MS.gene32688:CDS | 55.0% | |
!! | GGTGTTGTTCTTCGGCCTGT+TGG | - | 24279:17905-17924 | MS.gene32688:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
24279 | gene | 17761 | 18588 | 17761 | ID=MS.gene32688 |
24279 | mRNA | 17761 | 18588 | 17761 | ID=MS.gene32688.t1;Parent=MS.gene32688 |
24279 | exon | 17761 | 18588 | 17761 | ID=MS.gene32688.t1.exon1;Parent=MS.gene32688.t1 |
24279 | CDS | 17761 | 18588 | 17761 | ID=cds.MS.gene32688.t1;Parent=MS.gene32688.t1 |
Gene Sequence |
Protein sequence |