Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81525.t1 | XP_013464064.1 | 91.9 | 296 | 24 | 0 | 1 | 296 | 1 | 296 | 3.90E-150 | 540.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81525.t1 | O65220 | 67.6 | 247 | 70 | 5 | 55 | 296 | 40 | 281 | 5.7e-89 | 328.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81525.t1 | A0A072V7R3 | 91.9 | 296 | 24 | 0 | 1 | 296 | 1 | 296 | 2.8e-150 | 540.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049142 | MS.gene81525 | -0.808291 | 3.33E-50 | -1.69E-46 |
MS.gene049368 | MS.gene81525 | -0.811688 | 6.18E-51 | -1.69E-46 |
MS.gene049411 | MS.gene81525 | -0.813002 | 3.19E-51 | -1.69E-46 |
MS.gene050258 | MS.gene81525 | -0.802008 | 6.88E-49 | -1.69E-46 |
MS.gene050689 | MS.gene81525 | -0.800431 | 1.45E-48 | -1.69E-46 |
MS.gene051234 | MS.gene81525 | -0.816909 | 4.34E-52 | -1.69E-46 |
MS.gene051343 | MS.gene81525 | -0.811677 | 6.21E-51 | -1.69E-46 |
MS.gene052072 | MS.gene81525 | -0.807852 | 4.13E-50 | -1.69E-46 |
MS.gene052307 | MS.gene81525 | -0.818364 | 2.04E-52 | -1.69E-46 |
MS.gene052609 | MS.gene81525 | -0.839795 | 1.28E-57 | -1.69E-46 |
MS.gene053143 | MS.gene81525 | -0.847398 | 1.19E-59 | -1.69E-46 |
MS.gene053541 | MS.gene81525 | -0.800729 | 1.26E-48 | -1.69E-46 |
MS.gene053542 | MS.gene81525 | -0.812026 | 5.21E-51 | -1.69E-46 |
MS.gene054004 | MS.gene81525 | -0.831983 | 1.22E-55 | -1.69E-46 |
MS.gene054142 | MS.gene81525 | -0.811528 | 6.69E-51 | -1.69E-46 |
MS.gene055220 | MS.gene81525 | -0.808697 | 2.73E-50 | -1.69E-46 |
MS.gene055221 | MS.gene81525 | -0.819767 | 9.77E-53 | -1.69E-46 |
MS.gene055513 | MS.gene81525 | -0.828084 | 1.09E-54 | -1.69E-46 |
MS.gene055765 | MS.gene81525 | -0.801838 | 7.45E-49 | -1.69E-46 |
MS.gene056181 | MS.gene81525 | -0.801349 | 9.39E-49 | -1.69E-46 |
MS.gene056699 | MS.gene81525 | -0.81061 | 1.06E-50 | -1.69E-46 |
MS.gene057082 | MS.gene81525 | -0.81373 | 2.21E-51 | -1.69E-46 |
MS.gene057102 | MS.gene81525 | -0.825653 | 4.17E-54 | -1.69E-46 |
MS.gene058149 | MS.gene81525 | -0.824812 | 6.59E-54 | -1.69E-46 |
MS.gene05860 | MS.gene81525 | -0.802127 | 6.50E-49 | -1.69E-46 |
MS.gene059146 | MS.gene81525 | -0.806416 | 8.31E-50 | -1.69E-46 |
MS.gene059778 | MS.gene81525 | -0.873466 | 1.44E-67 | -1.69E-46 |
MS.gene05985 | MS.gene81525 | 0.818234 | 2.18E-52 | -1.69E-46 |
MS.gene060342 | MS.gene81525 | 0.820561 | 6.43E-53 | -1.69E-46 |
MS.gene060343 | MS.gene81525 | 0.836651 | 8.26E-57 | -1.69E-46 |
MS.gene060522 | MS.gene81525 | -0.809895 | 1.51E-50 | -1.69E-46 |
MS.gene060933 | MS.gene81525 | -0.81493 | 1.20E-51 | -1.69E-46 |
MS.gene060935 | MS.gene81525 | -0.803542 | 3.32E-49 | -1.69E-46 |
MS.gene060937 | MS.gene81525 | -0.818071 | 2.37E-52 | -1.69E-46 |
MS.gene061100 | MS.gene81525 | -0.854552 | 1.14E-61 | -1.69E-46 |
MS.gene061160 | MS.gene81525 | -0.807886 | 4.06E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81525.t1 | MTR_2g461260 | 97.973 | 296 | 6 | 0 | 1 | 296 | 1 | 296 | 0.0 | 588 |
MS.gene81525.t1 | MTR_4g073650 | 27.350 | 234 | 111 | 8 | 29 | 247 | 17 | 206 | 1.70e-18 | 82.8 |
MS.gene81525.t1 | MTR_1g117010 | 28.049 | 246 | 115 | 10 | 42 | 287 | 61 | 244 | 1.12e-16 | 78.2 |
MS.gene81525.t1 | MTR_1g117010 | 28.049 | 246 | 115 | 10 | 42 | 287 | 61 | 244 | 1.12e-16 | 78.2 |
MS.gene81525.t1 | MTR_1g085560 | 26.638 | 229 | 139 | 7 | 26 | 244 | 25 | 234 | 7.76e-16 | 75.9 |
MS.gene81525.t1 | MTR_7g110980 | 30.000 | 150 | 86 | 6 | 91 | 240 | 109 | 239 | 5.56e-15 | 73.6 |
MS.gene81525.t1 | MTR_3g070500 | 28.846 | 156 | 89 | 6 | 87 | 237 | 73 | 211 | 1.19e-13 | 69.3 |
MS.gene81525.t1 | MTR_3g463900 | 28.931 | 159 | 85 | 6 | 87 | 237 | 43 | 181 | 3.51e-13 | 67.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81525.t1 | AT5G35100 | 63.604 | 283 | 90 | 6 | 19 | 296 | 16 | 290 | 4.54e-107 | 313 |
MS.gene81525.t1 | AT5G35100 | 63.604 | 283 | 90 | 6 | 19 | 296 | 16 | 290 | 4.54e-107 | 313 |
MS.gene81525.t1 | AT5G35100 | 56.429 | 280 | 79 | 5 | 19 | 296 | 7 | 245 | 1.81e-89 | 266 |
MS.gene81525.t1 | AT5G13120 | 26.122 | 245 | 119 | 10 | 40 | 284 | 68 | 250 | 1.10e-14 | 72.8 |
MS.gene81525.t1 | AT5G13120 | 26.122 | 245 | 119 | 10 | 40 | 284 | 72 | 254 | 1.23e-14 | 72.8 |
MS.gene81525.t1 | AT2G29960 | 29.560 | 159 | 84 | 6 | 87 | 237 | 41 | 179 | 2.50e-14 | 70.9 |
MS.gene81525.t1 | AT2G29960 | 29.560 | 159 | 84 | 6 | 87 | 237 | 41 | 179 | 2.50e-14 | 70.9 |
MS.gene81525.t1 | AT4G34960 | 25.000 | 224 | 120 | 9 | 35 | 247 | 21 | 207 | 2.91e-14 | 70.9 |
MS.gene81525.t1 | AT3G55920 | 29.139 | 151 | 85 | 6 | 92 | 237 | 73 | 206 | 1.44e-13 | 69.3 |
MS.gene81525.t1 | AT5G58710 | 28.125 | 160 | 85 | 7 | 87 | 237 | 44 | 182 | 1.63e-13 | 68.6 |
MS.gene81525.t1 | AT3G62030 | 22.059 | 204 | 120 | 6 | 37 | 240 | 73 | 237 | 6.32e-13 | 67.8 |
MS.gene81525.t1 | AT3G62030 | 22.632 | 190 | 108 | 6 | 51 | 240 | 88 | 238 | 2.07e-12 | 66.2 |
MS.gene81525.t1 | AT3G56070 | 27.711 | 166 | 90 | 7 | 92 | 247 | 18 | 163 | 2.25e-12 | 64.7 |
MS.gene81525.t1 | AT3G56070 | 27.711 | 166 | 90 | 7 | 92 | 247 | 18 | 163 | 2.25e-12 | 64.7 |
MS.gene81525.t1 | AT3G62030 | 22.632 | 190 | 108 | 6 | 51 | 240 | 141 | 291 | 4.88e-12 | 65.9 |
Find 128 sgRNAs with CRISPR-Local
Find 253 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGTGGTGGTTGTTGGGTTA+TGG | 0.169130 | 2.2:-33991673 | None:intergenic |
AACTCAACATTCCTGTATTC+AGG | 0.224071 | 2.2:-33992248 | None:intergenic |
TCCAAATGGCGCGAGCATTC+TGG | 0.230009 | 2.2:-33994306 | None:intergenic |
TGAAGCGGAGGAGGAGAGGG+AGG | 0.264086 | 2.2:-33991784 | None:intergenic |
AAGCGGAGGAGGAGAGGGAG+GGG | 0.264419 | 2.2:-33991782 | None:intergenic |
ATTCAGCCAAGTCATTAAAT+TGG | 0.265328 | 2.2:-33994264 | None:intergenic |
GATAACAAGAATATTGTCTT+TGG | 0.278201 | 2.2:+33992308 | MS.gene81525:CDS |
GTGATGGTGGGTTTGAGAAT+TGG | 0.279398 | 2.2:-33991714 | None:intergenic |
GGGGAAGGTGAGTGTGGTGG+TGG | 0.282149 | 2.2:-33991763 | None:intergenic |
AGGGGAGTGGTGGTGGTTGT+TGG | 0.288314 | 2.2:-33991680 | None:intergenic |
TGATGGTGGGTTTGAGAATT+GGG | 0.311880 | 2.2:-33991713 | None:intergenic |
CCAGGTCAGTACTTTCTTGC+TGG | 0.314895 | 2.2:+33992062 | MS.gene81525:CDS |
CCCAGAATGCTCGCGCCATT+TGG | 0.315725 | 2.2:+33994305 | MS.gene81525:CDS |
TGGTGGAGAGAGGGGAGTGG+TGG | 0.336476 | 2.2:-33991690 | None:intergenic |
TTGTAGGAGGAAGATGAATT+AGG | 0.337127 | 2.2:-33992014 | None:intergenic |
TGTCACCGAGGGTGCGATTT+GGG | 0.340196 | 2.2:-33991878 | None:intergenic |
CGTCAGGGTCGTCCTGAAAA+AGG | 0.349200 | 2.2:+33992086 | MS.gene81525:CDS |
CGTTGTTTCGCTTTCGCTCT+CGG | 0.349428 | 2.2:+33992193 | MS.gene81525:CDS |
GAAGGTGAGTGTGGTGGTGG+TGG | 0.354143 | 2.2:-33991760 | None:intergenic |
GTACTTTCTTGCTGGACGTC+AGG | 0.355854 | 2.2:+33992070 | MS.gene81525:CDS |
CATCACCGACCGTATCTTCA+TGG | 0.358426 | 2.2:+33991827 | MS.gene81525:CDS |
TGGAGAGAGGGGAGTGGTGG+TGG | 0.359542 | 2.2:-33991687 | None:intergenic |
GAGGGAGGGGAAGGTGAGTG+TGG | 0.362666 | 2.2:-33991769 | None:intergenic |
CCAAATGGCGCGAGCATTCT+GGG | 0.363577 | 2.2:-33994305 | None:intergenic |
GAGAATTGGGTGGTGGAGAG+AGG | 0.373639 | 2.2:-33991700 | None:intergenic |
GCGATTTGGGAGGTAATAGT+TGG | 0.380387 | 2.2:-33991865 | None:intergenic |
GGGGAGTGGTGGTGGTTGTT+GGG | 0.382400 | 2.2:-33991679 | None:intergenic |
GGAGGAGGAGAGGGAGGGGA+AGG | 0.386644 | 2.2:-33991778 | None:intergenic |
ATGGTGGGGTTTGGTGGTTG+TGG | 0.391884 | 2.2:-33991807 | None:intergenic |
CGGTCGGTGATGGTGGGGTT+TGG | 0.394720 | 2.2:-33991816 | None:intergenic |
AGCGAAAGCGAAACAACGCC+GGG | 0.400381 | 2.2:-33992188 | None:intergenic |
GTGTCACCGAGGGTGCGATT+TGG | 0.403005 | 2.2:-33991879 | None:intergenic |
GGAGGGGAAGGTGAGTGTGG+TGG | 0.404648 | 2.2:-33991766 | None:intergenic |
GAGTGAGCGGCGGGTGATGG+TGG | 0.412527 | 2.2:-33991727 | None:intergenic |
TGGTGAAGCGGAGGAGGAGA+GGG | 0.413678 | 2.2:-33991787 | None:intergenic |
GTCTTTGGAACCGTGCTTGA+AGG | 0.413916 | 2.2:+33992323 | MS.gene81525:CDS |
AGAATTGGGTGGTGGAGAGA+GGG | 0.420473 | 2.2:-33991699 | None:intergenic |
TGCGTAAGCGCAAACGCCTT+AGG | 0.421002 | 2.2:-33992158 | None:intergenic |
GAGGAGTGAGCGGCGGGTGA+TGG | 0.428601 | 2.2:-33991730 | None:intergenic |
GAAGCGGAGGAGGAGAGGGA+GGG | 0.436968 | 2.2:-33991783 | None:intergenic |
TTACTCGGTCGCGTCATTCT+CGG | 0.439943 | 2.2:+33991930 | MS.gene81525:CDS |
GGGTGGTGGAGAGAGGGGAG+TGG | 0.441687 | 2.2:-33991693 | None:intergenic |
ATGCTCGCGCCATTTGGAAT+AGG | 0.449242 | 2.2:+33994311 | MS.gene81525:CDS |
GAGAATGACGCGACCGAGTA+AGG | 0.451654 | 2.2:-33991928 | None:intergenic |
TGGTGGTTGTTGGGTTATGG+AGG | 0.453657 | 2.2:-33991670 | None:intergenic |
TAAGGTGGAGTCGGAGCATA+AGG | 0.453838 | 2.2:-33991910 | None:intergenic |
TGCTCCGACTCCACCTTACT+CGG | 0.454011 | 2.2:+33991915 | MS.gene81525:CDS |
GTGGTGAAGCGGAGGAGGAG+AGG | 0.454371 | 2.2:-33991788 | None:intergenic |
GTGGACGAATGTGTTCTTGT+AGG | 0.459351 | 2.2:-33992030 | None:intergenic |
TCAAGTTTGACCCTGAATAC+AGG | 0.461819 | 2.2:+33992237 | MS.gene81525:CDS |
CGATTTGGGAGGTAATAGTT+GGG | 0.464305 | 2.2:-33991864 | None:intergenic |
GCGCTTACGCATTCTCGCCC+CGG | 0.469264 | 2.2:+33992170 | MS.gene81525:CDS |
ACTCAACATTCCTGTATTCA+GGG | 0.469446 | 2.2:-33992247 | None:intergenic |
GCGTAAGCGCAAACGCCTTA+GGG | 0.472386 | 2.2:-33992157 | None:intergenic |
AATTCGCCAATTTAATGACT+TGG | 0.479431 | 2.2:+33994258 | MS.gene81525:CDS |
GGAGGTAATAGTTGGGGCAG+AGG | 0.480555 | 2.2:-33991857 | None:intergenic |
TACTTTCTTGCTGGACGTCA+GGG | 0.483519 | 2.2:+33992071 | MS.gene81525:CDS |
GAAGATACGGTCGGTGATGG+TGG | 0.484265 | 2.2:-33991823 | None:intergenic |
TCGGTGATGGTGGGGTTTGG+TGG | 0.486531 | 2.2:-33991813 | None:intergenic |
GTTTGGTGGTTGTGGTGAAG+CGG | 0.489298 | 2.2:-33991799 | None:intergenic |
CTAATATAAATTGTGGTAAG+AGG | 0.490632 | 2.2:-33994334 | None:intergenic |
CGCGTCATTCTCGGACTCTA+CGG | 0.492773 | 2.2:+33991939 | MS.gene81525:CDS |
TCGTTCACCTGGTTGGTAAG+TGG | 0.493192 | 2.2:-33994236 | None:intergenic |
TGGTTGTGGTGAAGCGGAGG+AGG | 0.499350 | 2.2:-33991793 | None:intergenic |
TGTGAGGAGGAGTGAGCGGC+GGG | 0.504045 | 2.2:-33991736 | None:intergenic |
CGTTCACCTGGTTGGTAAGT+GGG | 0.504144 | 2.2:-33994235 | None:intergenic |
AGTGAGCGGCGGGTGATGGT+GGG | 0.505406 | 2.2:-33991726 | None:intergenic |
GAATTGGGTGGTGGAGAGAG+GGG | 0.508964 | 2.2:-33991698 | None:intergenic |
TGGTGGTTGTGGTGAAGCGG+AGG | 0.509114 | 2.2:-33991796 | None:intergenic |
CCGTTTCAATGTTGCGTGGG+AGG | 0.513215 | 2.2:-33992130 | None:intergenic |
GGGAGAGAAGGTGTGAGGGA+AGG | 0.513470 | 2.2:-33994385 | None:intergenic |
TTAAGGGAGAGAAGGTGTGA+GGG | 0.513923 | 2.2:-33994389 | None:intergenic |
ATTAGGAGAGGAAATGCAAA+GGG | 0.515231 | 2.2:-33991997 | None:intergenic |
AAGATACGGTCGGTGATGGT+GGG | 0.515609 | 2.2:-33991822 | None:intergenic |
GGCGAATTCGTTCACCTGGT+TGG | 0.521823 | 2.2:-33994243 | None:intergenic |
TACCTCCCAAATCGCACCCT+CGG | 0.528789 | 2.2:+33991873 | MS.gene81525:CDS |
GAGCGAAAGCGAAACAACGC+CGG | 0.529815 | 2.2:-33992189 | None:intergenic |
GTGTGGTGGTGGTGGATGTG+AGG | 0.530684 | 2.2:-33991752 | None:intergenic |
CAATTTATATTAGTGACTGT+GGG | 0.530711 | 2.2:+33994344 | MS.gene81525:CDS |
TGGGTTTGAGAATTGGGTGG+TGG | 0.538502 | 2.2:-33991707 | None:intergenic |
AATTGGCGAATTCGTTCACC+TGG | 0.540152 | 2.2:-33994247 | None:intergenic |
GAAAGAAGTTAAGGGAGAGA+AGG | 0.540359 | 2.2:-33994397 | None:intergenic |
TGGTGGTGGTGGATGTGAGG+AGG | 0.541066 | 2.2:-33991749 | None:intergenic |
CATTGAAACGGTTGACCCTA+AGG | 0.542502 | 2.2:+33992142 | MS.gene81525:CDS |
GTTAAGGGAGAGAAGGTGTG+AGG | 0.547655 | 2.2:-33994390 | None:intergenic |
GGCTGAAGTCCATGAAGATA+CGG | 0.548312 | 2.2:-33991836 | None:intergenic |
CATGAAGATACGGTCGGTGA+TGG | 0.548936 | 2.2:-33991826 | None:intergenic |
GGTAAGAGGCCTATTCCAAA+TGG | 0.553319 | 2.2:-33994320 | None:intergenic |
TCAAGCTGAGGACAAGGTCC+AGG | 0.559269 | 2.2:-33992287 | None:intergenic |
CAACCGTTTCAATGTTGCGT+GGG | 0.563080 | 2.2:-33992133 | None:intergenic |
ATGTGAGGAGGAGTGAGCGG+CGG | 0.568201 | 2.2:-33991737 | None:intergenic |
CCTCCCACGCAACATTGAAA+CGG | 0.568499 | 2.2:+33992130 | MS.gene81525:CDS |
ACAATTTATATTAGTGACTG+TGG | 0.569563 | 2.2:+33994343 | MS.gene81525:CDS |
GTCGGAGCATAAGGTGGAGA+TGG | 0.572449 | 2.2:-33991901 | None:intergenic |
TTGTTATCAAGCTGAGGACA+AGG | 0.573700 | 2.2:-33992293 | None:intergenic |
CAAGAACACATTCGTCCACA+AGG | 0.583521 | 2.2:+33992034 | MS.gene81525:CDS |
GGAGGAAGATGAATTAGGAG+AGG | 0.585467 | 2.2:-33992009 | None:intergenic |
TGGTGGGTTTGAGAATTGGG+TGG | 0.585572 | 2.2:-33991710 | None:intergenic |
AATTAGGAGAGGAAATGCAA+AGG | 0.593113 | 2.2:-33991998 | None:intergenic |
GAGTTTGTTACCTTCAAGCA+CGG | 0.596930 | 2.2:-33992333 | None:intergenic |
CCAGCAAGAAAGTACTGACC+TGG | 0.603788 | 2.2:-33992062 | None:intergenic |
GGTGGAGTCGGAGCATAAGG+TGG | 0.604418 | 2.2:-33991907 | None:intergenic |
AGATACGGTCGGTGATGGTG+GGG | 0.606920 | 2.2:-33991821 | None:intergenic |
GGTGGAGATGGTGTCACCGA+GGG | 0.608559 | 2.2:-33991889 | None:intergenic |
TCAACCGTTTCAATGTTGCG+TGG | 0.611186 | 2.2:-33992134 | None:intergenic |
TAGTGACTGTGGGGTGCTAG+AGG | 0.614129 | 2.2:+33994354 | MS.gene81525:CDS |
GTAAGTGGGAGTTGACGCTA+TGG | 0.616115 | 2.2:-33994221 | None:intergenic |
TGGATGTGAGGAGGAGTGAG+CGG | 0.619737 | 2.2:-33991740 | None:intergenic |
ATATTCTTGTTATCAAGCTG+AGG | 0.620954 | 2.2:-33992299 | None:intergenic |
TCAACTCCCACTTACCAACC+AGG | 0.622301 | 2.2:+33994229 | MS.gene81525:CDS |
AGGACAAGGTCCAGGACCAG+TGG | 0.626246 | 2.2:-33992279 | None:intergenic |
ATGTTGCGTGGGAGGTGACG+AGG | 0.627365 | 2.2:-33992122 | None:intergenic |
TTGAAATTTGAGACTGTGCG+TGG | 0.632219 | 2.2:-33991972 | None:intergenic |
TTGCGTGGGAGGTGACGAGG+AGG | 0.634472 | 2.2:-33992119 | None:intergenic |
TTGAGACTGTGCGTGGAACG+AGG | 0.635278 | 2.2:-33991965 | None:intergenic |
GCGACCGAGTAAGGTGGAGT+CGG | 0.639635 | 2.2:-33991919 | None:intergenic |
GATTTGGGAGGTAATAGTTG+GGG | 0.640976 | 2.2:-33991863 | None:intergenic |
ACTGACCTGGTAAAACCTTG+TGG | 0.646621 | 2.2:-33992049 | None:intergenic |
TGCGTGGGAGGTGACGAGGA+GGG | 0.647096 | 2.2:-33992118 | None:intergenic |
ACAGTCACTAATATAAATTG+TGG | 0.650557 | 2.2:-33994341 | None:intergenic |
CACCGAGGGTGCGATTTGGG+AGG | 0.650888 | 2.2:-33991875 | None:intergenic |
GTGGGAGGTGACGAGGAGGG+CGG | 0.652018 | 2.2:-33992115 | None:intergenic |
AATGACGCGACCGAGTAAGG+TGG | 0.658935 | 2.2:-33991925 | None:intergenic |
GACGAATGTGTTCTTGTAGG+AGG | 0.659670 | 2.2:-33992027 | None:intergenic |
AATTTATATTAGTGACTGTG+GGG | 0.667281 | 2.2:+33994345 | MS.gene81525:CDS |
GAAGTCCATGAAGATACGGT+CGG | 0.671501 | 2.2:-33991832 | None:intergenic |
GCGAAAGCGAAACAACGCCG+GGG | 0.709457 | 2.2:-33992187 | None:intergenic |
AGGTGGAGATGGTGTCACCG+AGG | 0.711362 | 2.2:-33991890 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTCCATATAATAAATTTAA+TGG | - | chr2.2:33993408-33993427 | None:intergenic | 10.0% |
!! | CATTGTATATAACAATATTA+CGG | + | chr2.2:33992711-33992730 | MS.gene81525:intron | 15.0% |
!! | TGACCATTAAATTTATTATA+TGG | + | chr2.2:33993402-33993421 | MS.gene81525:intron | 15.0% |
!! | AAAGTCAAAACTATTTAACA+TGG | - | chr2.2:33994016-33994035 | None:intergenic | 20.0% |
!! | AATTTATTATATGGAAACCA+TGG | + | chr2.2:33993411-33993430 | MS.gene81525:intron | 20.0% |
!! | ACATTTAACTATATTCTCAA+CGG | - | chr2.2:33992971-33992990 | None:intergenic | 20.0% |
!! | TGTAGTATATGGAATAATTT+AGG | + | chr2.2:33992415-33992434 | MS.gene81525:intron | 20.0% |
!!! | GAAATATTTGATCTCTTTTT+GGG | + | chr2.2:33994091-33994110 | MS.gene81525:intron | 20.0% |
!!! | GGTAGCATTTTAAAAAAATT+GGG | + | chr2.2:33992554-33992573 | MS.gene81525:intron | 20.0% |
!!! | TGAAATATTTGATCTCTTTT+TGG | + | chr2.2:33994090-33994109 | MS.gene81525:intron | 20.0% |
!!! | TGGTAGCATTTTAAAAAAAT+TGG | + | chr2.2:33992553-33992572 | MS.gene81525:intron | 20.0% |
!!! | TTTGTAAAAGTACTACAAAT+CGG | - | chr2.2:33993274-33993293 | None:intergenic | 20.0% |
!!! | TTTGTAGTACTTTTACAAAT+TGG | + | chr2.2:33993275-33993294 | MS.gene81525:intron | 20.0% |
! | AAAAACCCATAGTAAAAAAC+TGG | + | chr2.2:33993375-33993394 | MS.gene81525:intron | 25.0% |
! | AATTTATATTAGTGACTGTG+GGG | + | chr2.2:33994345-33994364 | MS.gene81525:CDS | 25.0% |
! | ACAATTTATATTAGTGACTG+TGG | + | chr2.2:33994343-33994362 | MS.gene81525:CDS | 25.0% |
! | ACAGTCACTAATATAAATTG+TGG | - | chr2.2:33994344-33994363 | None:intergenic | 25.0% |
! | ATAATCTTTGTAACTAAACC+TGG | + | chr2.2:33993917-33993936 | MS.gene81525:intron | 25.0% |
! | ATTATTCCATATACTACACA+AGG | - | chr2.2:33992413-33992432 | None:intergenic | 25.0% |
! | CAATTTATATTAGTGACTGT+GGG | + | chr2.2:33994344-33994363 | MS.gene81525:CDS | 25.0% |
! | CTAATATAAATTGTGGTAAG+AGG | - | chr2.2:33994337-33994356 | None:intergenic | 25.0% |
! | GAGGAGGATTTATATATATA+AGG | - | chr2.2:33993545-33993564 | None:intergenic | 25.0% |
! | GATAACAAGAATATTGTCTT+TGG | + | chr2.2:33992308-33992327 | MS.gene81525:CDS | 25.0% |
! | GTTGAGAATATAGTTAAATG+TGG | + | chr2.2:33992970-33992989 | MS.gene81525:intron | 25.0% |
! | TTATTAAATGGCAATGGTAA+TGG | - | chr2.2:33992946-33992965 | None:intergenic | 25.0% |
! | TTCCAGTTTAAACATTGAAA+AGG | - | chr2.2:33993094-33993113 | None:intergenic | 25.0% |
!! | AGGATTGAGTTATTTCAATT+TGG | - | chr2.2:33992393-33992412 | None:intergenic | 25.0% |
!! | TCAGTGATTTTCTACAAATT+GGG | - | chr2.2:33993317-33993336 | None:intergenic | 25.0% |
AAAACATGACCTCTTACTAA+TGG | - | chr2.2:33993987-33994006 | None:intergenic | 30.0% | |
AAACATGACCTCTTACTAAT+GGG | - | chr2.2:33993986-33994005 | None:intergenic | 30.0% | |
AACTTTAAACAATAGAGAGG+AGG | - | chr2.2:33993561-33993580 | None:intergenic | 30.0% | |
AATTCGCCAATTTAATGACT+TGG | + | chr2.2:33994258-33994277 | MS.gene81525:CDS | 30.0% | |
AGCTTAGGATTCATGAATAT+AGG | + | chr2.2:33992683-33992702 | MS.gene81525:intron | 30.0% | |
AGGAACTTTAAACAATAGAG+AGG | - | chr2.2:33993564-33993583 | None:intergenic | 30.0% | |
AGTAAAGAGAATTGAGAACT+AGG | + | chr2.2:33993815-33993834 | MS.gene81525:intron | 30.0% | |
AGTTGTAAAAATTTCTGCCA+TGG | + | chr2.2:33992920-33992939 | MS.gene81525:intron | 30.0% | |
ATTCAGCCAAGTCATTAAAT+TGG | - | chr2.2:33994267-33994286 | None:intergenic | 30.0% | |
CACTATGTCATAATAGAAGA+CGG | - | chr2.2:33993446-33993465 | None:intergenic | 30.0% | |
GTCAAAACTATTTAACATGG+AGG | - | chr2.2:33994013-33994032 | None:intergenic | 30.0% | |
TAACATGTGGATACACAAAA+TGG | - | chr2.2:33994053-33994072 | None:intergenic | 30.0% | |
TATGCTACTCTTGAAGTATA+GGG | - | chr2.2:33993770-33993789 | None:intergenic | 30.0% | |
TCAATGTTTAAACTGGAAAC+TGG | + | chr2.2:33993096-33993115 | MS.gene81525:intron | 30.0% | |
TCGTGCATAAAACTGTTATT+TGG | - | chr2.2:33992623-33992642 | None:intergenic | 30.0% | |
TCTAGTTGAATCTAATTGCA+GGG | + | chr2.2:33994182-33994201 | MS.gene81525:intron | 30.0% | |
TCTCAATCATACCAAATGAA+AGG | - | chr2.2:33992809-33992828 | None:intergenic | 30.0% | |
TCTCAATTCTCTTTACTACA+TGG | - | chr2.2:33993812-33993831 | None:intergenic | 30.0% | |
! | ATATTCTTGTTATCAAGCTG+AGG | - | chr2.2:33992302-33992321 | None:intergenic | 30.0% |
! | ATTGTTTAAAGTTCCTGATG+TGG | + | chr2.2:33993568-33993587 | MS.gene81525:intron | 30.0% |
! | CACCTTTTCAATGTTTAAAC+TGG | + | chr2.2:33993089-33993108 | MS.gene81525:intron | 30.0% |
! | GTCAGTGATTTTCTACAAAT+TGG | - | chr2.2:33993318-33993337 | None:intergenic | 30.0% |
! | TTCTAGTTGAATCTAATTGC+AGG | + | chr2.2:33994181-33994200 | MS.gene81525:intron | 30.0% |
! | TTGTTTAAAGTTCCTGATGT+GGG | + | chr2.2:33993569-33993588 | MS.gene81525:intron | 30.0% |
! | TTTATGCACGATTAACTTGA+AGG | + | chr2.2:33992632-33992651 | MS.gene81525:intron | 30.0% |
! | TTTTTCATAGTCATTAAGGC+TGG | - | chr2.2:33993359-33993378 | None:intergenic | 30.0% |
!! | GTTTATAAACCGATTTTGCA+GGG | - | chr2.2:33992595-33992614 | None:intergenic | 30.0% |
!! | TCTTTTTGGGCTAGATTTTA+TGG | + | chr2.2:33994104-33994123 | MS.gene81525:intron | 30.0% |
!! | TGTTTATAAACCGATTTTGC+AGG | - | chr2.2:33992596-33992615 | None:intergenic | 30.0% |
!! | TTCTCAACGGTGTTATTAAA+TGG | - | chr2.2:33992958-33992977 | None:intergenic | 30.0% |
!!! | AATGACTTGGCTGAATTTTT+TGG | + | chr2.2:33994271-33994290 | MS.gene81525:CDS | 30.0% |
!!! | ACAGACCAGTTTTTTACTAT+GGG | - | chr2.2:33993383-33993402 | None:intergenic | 30.0% |
!!! | GGGTTTTTTCATAGTCATTA+AGG | - | chr2.2:33993363-33993382 | None:intergenic | 30.0% |
!!! | TGAATTTTTTGGAGACGAAA+GGG | + | chr2.2:33994282-33994301 | MS.gene81525:CDS | 30.0% |
AAACTCCGCAATATAAACCA+TGG | + | chr2.2:33992855-33992874 | MS.gene81525:intron | 35.0% | |
AACGAATCTTAGATATGCTG+TGG | + | chr2.2:33992533-33992552 | MS.gene81525:intron | 35.0% | |
AACTCAACATTCCTGTATTC+AGG | - | chr2.2:33992251-33992270 | None:intergenic | 35.0% | |
AATTAGGAGAGGAAATGCAA+AGG | - | chr2.2:33992001-33992020 | None:intergenic | 35.0% | |
ACTCAACATTCCTGTATTCA+GGG | - | chr2.2:33992250-33992269 | None:intergenic | 35.0% | |
ATGATTGAGAATCAGTGTTG+TGG | + | chr2.2:33992819-33992838 | MS.gene81525:intron | 35.0% | |
ATGCTCTCAACTTTCAATGT+TGG | + | chr2.2:33993640-33993659 | MS.gene81525:intron | 35.0% | |
ATTAGGAGAGGAAATGCAAA+GGG | - | chr2.2:33992000-33992019 | None:intergenic | 35.0% | |
CTCAATCCTTGTGTAGTATA+TGG | + | chr2.2:33992404-33992423 | MS.gene81525:intron | 35.0% | |
CTGAAAACAACTCTAACATG+TGG | - | chr2.2:33994066-33994085 | None:intergenic | 35.0% | |
GATTCTAGTCTCAAAATGAG+TGG | + | chr2.2:33993199-33993218 | MS.gene81525:intron | 35.0% | |
GTATGCTACTCTTGAAGTAT+AGG | - | chr2.2:33993771-33993790 | None:intergenic | 35.0% | |
GTTTCAAACACAAGAAGCTT+AGG | + | chr2.2:33992668-33992687 | MS.gene81525:intron | 35.0% | |
TAGAAGCTGAGCAATGTAAT+TGG | - | chr2.2:33994166-33994185 | None:intergenic | 35.0% | |
TGAGAACTAGGTTACAATGA+TGG | + | chr2.2:33993827-33993846 | MS.gene81525:intron | 35.0% | |
TGTTAAAATAGTCCCACATC+AGG | - | chr2.2:33993584-33993603 | None:intergenic | 35.0% | |
TTGTAGGAGGAAGATGAATT+AGG | - | chr2.2:33992017-33992036 | None:intergenic | 35.0% | |
TTTACTACATGGTACGAGTT+CGG | - | chr2.2:33993801-33993820 | None:intergenic | 35.0% | |
! | GGTTGATGTACTCTAAATTG+TGG | + | chr2.2:33992991-33993010 | MS.gene81525:intron | 35.0% |
! | GTTGAGTTTTTAATCACCAC+TGG | + | chr2.2:33992263-33992282 | MS.gene81525:CDS | 35.0% |
! | TCTTGAAGTATAGGGTACTT+GGG | - | chr2.2:33993762-33993781 | None:intergenic | 35.0% |
! | TGGTTTGTCACAGTATCATA+AGG | + | chr2.2:33993847-33993866 | MS.gene81525:intron | 35.0% |
! | TGTTACCGATTGTTTGATAG+CGG | + | chr2.2:33992503-33992522 | MS.gene81525:intron | 35.0% |
!! | ACGGTGTTATTAAATGGCAA+TGG | - | chr2.2:33992952-33992971 | None:intergenic | 35.0% |
!!! | CACAGACCAGTTTTTTACTA+TGG | - | chr2.2:33993384-33993403 | None:intergenic | 35.0% |
!!! | CTGAATTTTTTGGAGACGAA+AGG | + | chr2.2:33994281-33994300 | MS.gene81525:CDS | 35.0% |
AAAAGAGTGACACTGAGTGT+TGG | + | chr2.2:33993151-33993170 | MS.gene81525:intron | 40.0% | |
AAAGGTAGCCAACCACAATT+TGG | - | chr2.2:33993051-33993070 | None:intergenic | 40.0% | |
AATATAAACCATGGCAGGCA+AGG | + | chr2.2:33992864-33992883 | MS.gene81525:intron | 40.0% | |
ACAAATCGGTACACACAAAC+TGG | - | chr2.2:33993260-33993279 | None:intergenic | 40.0% | |
AGATACCTTTGTAGGAGATG+AGG | + | chr2.2:33993119-33993138 | MS.gene81525:intron | 40.0% | |
AGCATTGCTGTCAAAAACCT+TGG | + | chr2.2:33993015-33993034 | MS.gene81525:intron | 40.0% | |
AGCCAACCACAATTTGGATT+GGG | - | chr2.2:33993045-33993064 | None:intergenic | 40.0% | |
AGTGGTGACATAATTCACCA+GGG | + | chr2.2:33993217-33993236 | MS.gene81525:intron | 40.0% | |
ATATAAACCATGGCAGGCAA+GGG | + | chr2.2:33992865-33992884 | MS.gene81525:intron | 40.0% | |
ATCAGTGTTGTGGTGATTGA+AGG | + | chr2.2:33992829-33992848 | MS.gene81525:intron | 40.0% | |
ATTCTCCTCATCTCCTACAA+AGG | - | chr2.2:33993127-33993146 | None:intergenic | 40.0% | |
CAAACTCAACCCTGCAAAAT+CGG | + | chr2.2:33992583-33992602 | MS.gene81525:intron | 40.0% | |
CAGAACCAGGTTTCGAAAAA+AGG | - | chr2.2:33993069-33993088 | None:intergenic | 40.0% | |
GAAACTGGAGATACCTTTGT+AGG | + | chr2.2:33993111-33993130 | MS.gene81525:intron | 40.0% | |
GATTTGGGAGGTAATAGTTG+GGG | - | chr2.2:33991866-33991885 | None:intergenic | 40.0% | |
GGTCAAAAGCAGCAAAATCA+GGG | + | chr2.2:33992732-33992751 | MS.gene81525:intron | 40.0% | |
GTTGAATCTAATTGCAGGGT+TGG | + | chr2.2:33994186-33994205 | MS.gene81525:intron | 40.0% | |
TAGCCAACCACAATTTGGAT+TGG | - | chr2.2:33993046-33993065 | None:intergenic | 40.0% | |
TCAAGTTTGACCCTGAATAC+AGG | + | chr2.2:33992237-33992256 | MS.gene81525:CDS | 40.0% | |
TGTACTCTCCCATTAGTAAG+AGG | + | chr2.2:33993975-33993994 | MS.gene81525:intron | 40.0% | |
TTACTACATGGTACGAGTTC+GGG | - | chr2.2:33993800-33993819 | None:intergenic | 40.0% | |
TTGTTATCAAGCTGAGGACA+AGG | - | chr2.2:33992296-33992315 | None:intergenic | 40.0% | |
! | AAAAGCACAAACGTTTCACC+AGG | - | chr2.2:33993938-33993957 | None:intergenic | 40.0% |
! | AATTTGGATTGGGACATCCA+AGG | - | chr2.2:33993035-33993054 | None:intergenic | 40.0% |
! | CAAACTGGTTTCAGTTCTCA+AGG | - | chr2.2:33993245-33993264 | None:intergenic | 40.0% |
! | CGATTTGGGAGGTAATAGTT+GGG | - | chr2.2:33991867-33991886 | None:intergenic | 40.0% |
! | CTCTTGAAGTATAGGGTACT+TGG | - | chr2.2:33993763-33993782 | None:intergenic | 40.0% |
! | CTTGAAGTATAGGGTACTTG+GGG | - | chr2.2:33993761-33993780 | None:intergenic | 40.0% |
! | TTGAAATTTGAGACTGTGCG+TGG | - | chr2.2:33991975-33991994 | None:intergenic | 40.0% |
! | TTGAAGTATAGGGTACTTGG+GGG | - | chr2.2:33993760-33993779 | None:intergenic | 40.0% |
! | TTTTTAATCACCACTGGTCC+TGG | + | chr2.2:33992269-33992288 | MS.gene81525:CDS | 40.0% |
!! | GAGTTTGTTACCTTCAAGCA+CGG | - | chr2.2:33992336-33992355 | None:intergenic | 40.0% |
!! | TGATGGTGGGTTTGAGAATT+GGG | - | chr2.2:33991716-33991735 | None:intergenic | 40.0% |
AATTGGCGAATTCGTTCACC+TGG | - | chr2.2:33994250-33994269 | None:intergenic | 45.0% | |
ACTGACCTGGTAAAACCTTG+TGG | - | chr2.2:33992052-33992071 | None:intergenic | 45.0% | |
CAACCGTTTCAATGTTGCGT+GGG | - | chr2.2:33992136-33992155 | None:intergenic | 45.0% | |
CAAGAACACATTCGTCCACA+AGG | + | chr2.2:33992034-33992053 | MS.gene81525:CDS | 45.0% | |
CATTGAAACGGTTGACCCTA+AGG | + | chr2.2:33992142-33992161 | MS.gene81525:CDS | 45.0% | |
CGGTCAAAAGCAGCAAAATC+AGG | + | chr2.2:33992731-33992750 | MS.gene81525:intron | 45.0% | |
GAAGTCCATGAAGATACGGT+CGG | - | chr2.2:33991835-33991854 | None:intergenic | 45.0% | |
GACGAATGTGTTCTTGTAGG+AGG | - | chr2.2:33992030-33992049 | None:intergenic | 45.0% | |
GAGTGGTGACATAATTCACC+AGG | + | chr2.2:33993216-33993235 | MS.gene81525:intron | 45.0% | |
GCCTGCCATGGTTTATATTG+CGG | - | chr2.2:33992863-33992882 | None:intergenic | 45.0% | |
GCGTCTTAGCGAATTTGTGT+AGG | - | chr2.2:33992893-33992912 | None:intergenic | 45.0% | |
GGAGGAAGATGAATTAGGAG+AGG | - | chr2.2:33992012-33992031 | None:intergenic | 45.0% | |
GGATGTCCCAATCCAAATTG+TGG | + | chr2.2:33993036-33993055 | MS.gene81525:intron | 45.0% | |
GGCTGAAGTCCATGAAGATA+CGG | - | chr2.2:33991839-33991858 | None:intergenic | 45.0% | |
GGTAAGAGGCCTATTCCAAA+TGG | - | chr2.2:33994323-33994342 | None:intergenic | 45.0% | |
GTCAGCCGCTATCAAACAAT+CGG | - | chr2.2:33992511-33992530 | None:intergenic | 45.0% | |
GTCCCAATCCAAATTGTGGT+TGG | + | chr2.2:33993040-33993059 | MS.gene81525:intron | 45.0% | |
GTGGACGAATGTGTTCTTGT+AGG | - | chr2.2:33992033-33992052 | None:intergenic | 45.0% | |
TACTTTCTTGCTGGACGTCA+GGG | + | chr2.2:33992071-33992090 | MS.gene81525:CDS | 45.0% | |
TATAAACCATGGCAGGCAAG+GGG | + | chr2.2:33992866-33992885 | MS.gene81525:intron | 45.0% | |
TCAACCGTTTCAATGTTGCG+TGG | - | chr2.2:33992137-33992156 | None:intergenic | 45.0% | |
TCCGCAATATAAACCATGGC+AGG | + | chr2.2:33992859-33992878 | MS.gene81525:intron | 45.0% | |
TGCGTTGCGATCCTTTCATT+TGG | + | chr2.2:33992795-33992814 | MS.gene81525:intron | 45.0% | |
TGTCATAATAGAAGACGGCG+CGG | - | chr2.2:33993441-33993460 | None:intergenic | 45.0% | |
! | CATTGAAAAGGTGCAGAACC+AGG | - | chr2.2:33993082-33993101 | None:intergenic | 45.0% |
! | GCGATTTGGGAGGTAATAGT+TGG | - | chr2.2:33991868-33991887 | None:intergenic | 45.0% |
! | TGAAGTATAGGGTACTTGGG+GGG | - | chr2.2:33993759-33993778 | None:intergenic | 45.0% |
! | TTAAGGGAGAGAAGGTGTGA+GGG | - | chr2.2:33994392-33994411 | None:intergenic | 45.0% |
! | TTCGTCCACAAGGTTTTACC+AGG | + | chr2.2:33992044-33992063 | MS.gene81525:CDS | 45.0% |
!! | AATGGCAATGGTAATGGCCA+TGG | - | chr2.2:33992940-33992959 | None:intergenic | 45.0% |
!! | GGTATACACAGTTGGTTCGT+TGG | - | chr2.2:33993738-33993757 | None:intergenic | 45.0% |
!! | GTGATGGTGGGTTTGAGAAT+TGG | - | chr2.2:33991717-33991736 | None:intergenic | 45.0% |
!!! | GGCTACCTTTTTTCGAAACC+TGG | + | chr2.2:33993061-33993080 | MS.gene81525:intron | 45.0% |
CATCACCGACCGTATCTTCA+TGG | + | chr2.2:33991827-33991846 | MS.gene81525:CDS | 50.0% | |
CATGAAGATACGGTCGGTGA+TGG | - | chr2.2:33991829-33991848 | None:intergenic | 50.0% | |
CCAGGTCAGTACTTTCTTGC+TGG | + | chr2.2:33992062-33992081 | MS.gene81525:CDS | 50.0% | |
CCTCCCACGCAACATTGAAA+CGG | + | chr2.2:33992130-33992149 | MS.gene81525:CDS | 50.0% | |
CGCAATTCTCCTGTGTACGA+GGG | - | chr2.2:33992475-33992494 | None:intergenic | 50.0% | |
GTAAGTGGGAGTTGACGCTA+TGG | - | chr2.2:33994224-33994243 | None:intergenic | 50.0% | |
GTACTTTCTTGCTGGACGTC+AGG | + | chr2.2:33992070-33992089 | MS.gene81525:CDS | 50.0% | |
GTCATAATAGAAGACGGCGC+GGG | - | chr2.2:33993440-33993459 | None:intergenic | 50.0% | |
TAAGGTGGAGTCGGAGCATA+AGG | - | chr2.2:33991913-33991932 | None:intergenic | 50.0% | |
TCAACTCCCACTTACCAACC+AGG | + | chr2.2:33994229-33994248 | MS.gene81525:CDS | 50.0% | |
TGGGTTTGAGAATTGGGTGG+TGG | - | chr2.2:33991710-33991729 | None:intergenic | 50.0% | |
TGGTGGTTGTTGGGTTATGG+AGG | - | chr2.2:33991673-33991692 | None:intergenic | 50.0% | |
TTACTCGGTCGCGTCATTCT+CGG | + | chr2.2:33991930-33991949 | MS.gene81525:CDS | 50.0% | |
TTAGCATAGCCCTCGTACAC+AGG | + | chr2.2:33992463-33992482 | MS.gene81525:intron | 50.0% | |
! | AAGATACGGTCGGTGATGGT+GGG | - | chr2.2:33991825-33991844 | None:intergenic | 50.0% |
! | ACTTGGGGGGTATACACAGT+TGG | - | chr2.2:33993746-33993765 | None:intergenic | 50.0% |
! | ATGCTCGCGCCATTTGGAAT+AGG | + | chr2.2:33994311-33994330 | MS.gene81525:CDS | 50.0% |
! | CGTTGTTTCGCTTTCGCTCT+CGG | + | chr2.2:33992193-33992212 | MS.gene81525:CDS | 50.0% |
! | GTTTGGTGGTTGTGGTGAAG+CGG | - | chr2.2:33991802-33991821 | None:intergenic | 50.0% |
! | TTTCAGTTCTCAAGGCACCC+TGG | - | chr2.2:33993237-33993256 | None:intergenic | 50.0% |
!! | AGAATTGGGTGGTGGAGAGA+GGG | - | chr2.2:33991702-33991721 | None:intergenic | 50.0% |
!! | CCAGCAAGAAAGTACTGACC+TGG | - | chr2.2:33992065-33992084 | None:intergenic | 50.0% |
!! | CGTTCACCTGGTTGGTAAGT+GGG | - | chr2.2:33994238-33994257 | None:intergenic | 50.0% |
!! | GTCTTTGGAACCGTGCTTGA+AGG | + | chr2.2:33992323-33992342 | MS.gene81525:CDS | 50.0% |
!! | TCGTTCACCTGGTTGGTAAG+TGG | - | chr2.2:33994239-33994258 | None:intergenic | 50.0% |
!! | TGGTGGGTTTGAGAATTGGG+TGG | - | chr2.2:33991713-33991732 | None:intergenic | 50.0% |
!! | TGGTGGTGGTTGTTGGGTTA+TGG | - | chr2.2:33991676-33991695 | None:intergenic | 50.0% |
AATGACGCGACCGAGTAAGG+TGG | - | chr2.2:33991928-33991947 | None:intergenic | 55.0% | |
AGCGAAAGCGAAACAACGCC+GGG | - | chr2.2:33992191-33992210 | None:intergenic | 55.0% | |
CCAAATGGCGCGAGCATTCT+GGG | - | chr2.2:33994308-33994327 | None:intergenic | 55.0% | |
CCGTTTCAATGTTGCGTGGG+AGG | - | chr2.2:33992133-33992152 | None:intergenic | 55.0% | |
CGCGTCATTCTCGGACTCTA+CGG | + | chr2.2:33991939-33991958 | MS.gene81525:CDS | 55.0% | |
CGTCAGGGTCGTCCTGAAAA+AGG | + | chr2.2:33992086-33992105 | MS.gene81525:CDS | 55.0% | |
GAGAATGACGCGACCGAGTA+AGG | - | chr2.2:33991931-33991950 | None:intergenic | 55.0% | |
GAGCGAAAGCGAAACAACGC+CGG | - | chr2.2:33992192-33992211 | None:intergenic | 55.0% | |
GCGCAATTCTCCTGTGTACG+AGG | - | chr2.2:33992476-33992495 | None:intergenic | 55.0% | |
GCGTAAGCGCAAACGCCTTA+GGG | - | chr2.2:33992160-33992179 | None:intergenic | 55.0% | |
GGAGGTAATAGTTGGGGCAG+AGG | - | chr2.2:33991860-33991879 | None:intergenic | 55.0% | |
GGCGAATTCGTTCACCTGGT+TGG | - | chr2.2:33994246-33994265 | None:intergenic | 55.0% | |
GTCGGAGCATAAGGTGGAGA+TGG | - | chr2.2:33991904-33991923 | None:intergenic | 55.0% | |
TACCTCCCAAATCGCACCCT+CGG | + | chr2.2:33991873-33991892 | MS.gene81525:CDS | 55.0% | |
TCAAGCTGAGGACAAGGTCC+AGG | - | chr2.2:33992290-33992309 | None:intergenic | 55.0% | |
TCCAAATGGCGCGAGCATTC+TGG | - | chr2.2:33994309-33994328 | None:intergenic | 55.0% | |
TGCGTAAGCGCAAACGCCTT+AGG | - | chr2.2:33992161-33992180 | None:intergenic | 55.0% | |
TGCTCCGACTCCACCTTACT+CGG | + | chr2.2:33991915-33991934 | MS.gene81525:CDS | 55.0% | |
TGGATGTGAGGAGGAGTGAG+CGG | - | chr2.2:33991743-33991762 | None:intergenic | 55.0% | |
TTGAGACTGTGCGTGGAACG+AGG | - | chr2.2:33991968-33991987 | None:intergenic | 55.0% | |
! | AGATACGGTCGGTGATGGTG+GGG | - | chr2.2:33991824-33991843 | None:intergenic | 55.0% |
! | GAAGATACGGTCGGTGATGG+TGG | - | chr2.2:33991826-33991845 | None:intergenic | 55.0% |
! | TAGTGACTGTGGGGTGCTAG+AGG | + | chr2.2:33994354-33994373 | MS.gene81525:CDS | 55.0% |
! | TGTCACCGAGGGTGCGATTT+GGG | - | chr2.2:33991881-33991900 | None:intergenic | 55.0% |
!! | ATGGTGGGGTTTGGTGGTTG+TGG | - | chr2.2:33991810-33991829 | None:intergenic | 55.0% |
!! | GAATTGGGTGGTGGAGAGAG+GGG | - | chr2.2:33991701-33991720 | None:intergenic | 55.0% |
!! | GAGAATTGGGTGGTGGAGAG+AGG | - | chr2.2:33991703-33991722 | None:intergenic | 55.0% |
AGGACAAGGTCCAGGACCAG+TGG | - | chr2.2:33992282-33992301 | None:intergenic | 60.0% | |
ATGTGAGGAGGAGTGAGCGG+CGG | - | chr2.2:33991740-33991759 | None:intergenic | 60.0% | |
ATGTTGCGTGGGAGGTGACG+AGG | - | chr2.2:33992125-33992144 | None:intergenic | 60.0% | |
CCCAGAATGCTCGCGCCATT+TGG | + | chr2.2:33994305-33994324 | MS.gene81525:CDS | 60.0% | |
GCGAAAGCGAAACAACGCCG+GGG | - | chr2.2:33992190-33992209 | None:intergenic | 60.0% | |
GCGACCGAGTAAGGTGGAGT+CGG | - | chr2.2:33991922-33991941 | None:intergenic | 60.0% | |
GGGTCGTCCTGAAAAAGGCG+AGG | + | chr2.2:33992091-33992110 | MS.gene81525:CDS | 60.0% | |
GGTGGAGTCGGAGCATAAGG+TGG | - | chr2.2:33991910-33991929 | None:intergenic | 60.0% | |
TGGTGAAGCGGAGGAGGAGA+GGG | - | chr2.2:33991790-33991809 | None:intergenic | 60.0% | |
TGGTGGTTGTGGTGAAGCGG+AGG | - | chr2.2:33991799-33991818 | None:intergenic | 60.0% | |
TGGTTGTGGTGAAGCGGAGG+AGG | - | chr2.2:33991796-33991815 | None:intergenic | 60.0% | |
! | GGGAGAGAAGGTGTGAGGGA+AGG | - | chr2.2:33994388-33994407 | None:intergenic | 60.0% |
! | GTGTCACCGAGGGTGCGATT+TGG | - | chr2.2:33991882-33991901 | None:intergenic | 60.0% |
!! | AGGGGAGTGGTGGTGGTTGT+TGG | - | chr2.2:33991683-33991702 | None:intergenic | 60.0% |
!! | AGGTGGAGATGGTGTCACCG+AGG | - | chr2.2:33991893-33991912 | None:intergenic | 60.0% |
!! | GAAGGTGAGTGTGGTGGTGG+TGG | - | chr2.2:33991763-33991782 | None:intergenic | 60.0% |
!! | GGGGAGTGGTGGTGGTTGTT+GGG | - | chr2.2:33991682-33991701 | None:intergenic | 60.0% |
!! | GGTGGAGATGGTGTCACCGA+GGG | - | chr2.2:33991892-33991911 | None:intergenic | 60.0% |
!! | GTGTGGTGGTGGTGGATGTG+AGG | - | chr2.2:33991755-33991774 | None:intergenic | 60.0% |
!! | TCGGTGATGGTGGGGTTTGG+TGG | - | chr2.2:33991816-33991835 | None:intergenic | 60.0% |
!! | TGGTGGTGGTGGATGTGAGG+AGG | - | chr2.2:33991752-33991771 | None:intergenic | 60.0% |
AAGCGGAGGAGGAGAGGGAG+GGG | - | chr2.2:33991785-33991804 | None:intergenic | 65.0% | |
GAAGACGGCGCGGGTTTCCA+TGG | - | chr2.2:33993431-33993450 | None:intergenic | 65.0% | |
GAAGCGGAGGAGGAGAGGGA+GGG | - | chr2.2:33991786-33991805 | None:intergenic | 65.0% | |
GAGGGAGGGGAAGGTGAGTG+TGG | - | chr2.2:33991772-33991791 | None:intergenic | 65.0% | |
GCGCTTACGCATTCTCGCCC+CGG | + | chr2.2:33992170-33992189 | MS.gene81525:CDS | 65.0% | |
GGAGGGGAAGGTGAGTGTGG+TGG | - | chr2.2:33991769-33991788 | None:intergenic | 65.0% | |
GGGGAAGGTGAGTGTGGTGG+TGG | - | chr2.2:33991766-33991785 | None:intergenic | 65.0% | |
GTAGGACCCCTTGCCTGCCA+TGG | - | chr2.2:33992875-33992894 | None:intergenic | 65.0% | |
GTGGTGAAGCGGAGGAGGAG+AGG | - | chr2.2:33991791-33991810 | None:intergenic | 65.0% | |
TGAAGCGGAGGAGGAGAGGG+AGG | - | chr2.2:33991787-33991806 | None:intergenic | 65.0% | |
TGCGTGGGAGGTGACGAGGA+GGG | - | chr2.2:33992121-33992140 | None:intergenic | 65.0% | |
TGGAGAGAGGGGAGTGGTGG+TGG | - | chr2.2:33991690-33991709 | None:intergenic | 65.0% | |
TGGTGGAGAGAGGGGAGTGG+TGG | - | chr2.2:33991693-33991712 | None:intergenic | 65.0% | |
TGTGAGGAGGAGTGAGCGGC+GGG | - | chr2.2:33991739-33991758 | None:intergenic | 65.0% | |
TTGCGTGGGAGGTGACGAGG+AGG | - | chr2.2:33992122-33992141 | None:intergenic | 65.0% | |
! | AGTGAGCGGCGGGTGATGGT+GGG | - | chr2.2:33991729-33991748 | None:intergenic | 65.0% |
! | CACCGAGGGTGCGATTTGGG+AGG | - | chr2.2:33991878-33991897 | None:intergenic | 65.0% |
! | GGGCGGACCTCGCCTTTTTC+AGG | - | chr2.2:33992101-33992120 | None:intergenic | 65.0% |
!! | CGGTCGGTGATGGTGGGGTT+TGG | - | chr2.2:33991819-33991838 | None:intergenic | 65.0% |
GAGGAGTGAGCGGCGGGTGA+TGG | - | chr2.2:33991733-33991752 | None:intergenic | 70.0% | |
GGAGGAGGAGAGGGAGGGGA+AGG | - | chr2.2:33991781-33991800 | None:intergenic | 70.0% | |
GTGGGAGGTGACGAGGAGGG+CGG | - | chr2.2:33992118-33992137 | None:intergenic | 70.0% | |
! | GAGTGAGCGGCGGGTGATGG+TGG | - | chr2.2:33991730-33991749 | None:intergenic | 70.0% |
!! | GGGTGGTGGAGAGAGGGGAG+TGG | - | chr2.2:33991696-33991715 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 33991663 | 33994411 | 33991663 | ID=MS.gene81525 |
chr2.2 | mRNA | 33991663 | 33994411 | 33991663 | ID=MS.gene81525.t1;Parent=MS.gene81525 |
chr2.2 | exon | 33991663 | 33992344 | 33991663 | ID=MS.gene81525.t1.exon1;Parent=MS.gene81525.t1 |
chr2.2 | CDS | 33991663 | 33992344 | 33991663 | ID=cds.MS.gene81525.t1;Parent=MS.gene81525.t1 |
chr2.2 | exon | 33994203 | 33994411 | 33994203 | ID=MS.gene81525.t1.exon2;Parent=MS.gene81525.t1 |
chr2.2 | CDS | 33994203 | 33994411 | 33994203 | ID=cds.MS.gene81525.t1;Parent=MS.gene81525.t1 |
Gene Sequence |
Protein sequence |