Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36285.t1 | KEH39574.1 | 99.1 | 918 | 8 | 0 | 1 | 918 | 1 | 918 | 0.00E+00 | 1451 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36285.t1 | Q9C827 | 85.0 | 922 | 133 | 1 | 1 | 917 | 1 | 922 | 0.0e+00 | 1275.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36285.t1 | A0A072VC11 | 99.1 | 918 | 8 | 0 | 1 | 918 | 1 | 918 | 0.0e+00 | 1451.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene36285 | 0.843892 | 1.06E-58 | -1.69E-46 |
| MS.gene049143 | MS.gene36285 | 0.811288 | 7.55E-51 | -1.69E-46 |
| MS.gene049193 | MS.gene36285 | 0.801419 | 9.09E-49 | -1.69E-46 |
| MS.gene049227 | MS.gene36285 | 0.847048 | 1.48E-59 | -1.69E-46 |
| MS.gene049350 | MS.gene36285 | 0.818879 | 1.56E-52 | -1.69E-46 |
| MS.gene049807 | MS.gene36285 | 0.877505 | 5.95E-69 | -1.69E-46 |
| MS.gene049887 | MS.gene36285 | 0.859479 | 4.02E-63 | -1.69E-46 |
| MS.gene050085 | MS.gene36285 | 0.809943 | 1.47E-50 | -1.69E-46 |
| MS.gene050224 | MS.gene36285 | 0.83447 | 2.94E-56 | -1.69E-46 |
| MS.gene050257 | MS.gene36285 | 0.833167 | 6.23E-56 | -1.69E-46 |
| MS.gene050258 | MS.gene36285 | 0.832468 | 9.29E-56 | -1.69E-46 |
| MS.gene050297 | MS.gene36285 | 0.808107 | 3.64E-50 | -1.69E-46 |
| MS.gene050348 | MS.gene36285 | 0.810953 | 8.92E-51 | -1.69E-46 |
| MS.gene050359 | MS.gene36285 | 0.813977 | 1.95E-51 | -1.69E-46 |
| MS.gene050551 | MS.gene36285 | 0.853582 | 2.17E-61 | -1.69E-46 |
| MS.gene050689 | MS.gene36285 | 0.80826 | 3.38E-50 | -1.69E-46 |
| MS.gene050818 | MS.gene36285 | 0.801099 | 1.06E-48 | -1.69E-46 |
| MS.gene050838 | MS.gene36285 | 0.861989 | 6.96E-64 | -1.69E-46 |
| MS.gene050894 | MS.gene36285 | 0.846375 | 2.26E-59 | -1.69E-46 |
| MS.gene050901 | MS.gene36285 | 0.808532 | 2.96E-50 | -1.69E-46 |
| MS.gene051029 | MS.gene36285 | 0.831979 | 1.23E-55 | -1.69E-46 |
| MS.gene051102 | MS.gene36285 | 0.836252 | 1.04E-56 | -1.69E-46 |
| MS.gene051234 | MS.gene36285 | 0.867421 | 1.39E-65 | -1.69E-46 |
| MS.gene051343 | MS.gene36285 | 0.838917 | 2.16E-57 | -1.69E-46 |
| MS.gene051381 | MS.gene36285 | 0.839504 | 1.52E-57 | -1.69E-46 |
| MS.gene051450 | MS.gene36285 | 0.828278 | 9.83E-55 | -1.69E-46 |
| MS.gene051642 | MS.gene36285 | 0.858544 | 7.66E-63 | -1.69E-46 |
| MS.gene051724 | MS.gene36285 | 0.83546 | 1.66E-56 | -1.69E-46 |
| MS.gene051885 | MS.gene36285 | 0.864543 | 1.13E-64 | -1.69E-46 |
| MS.gene052072 | MS.gene36285 | 0.814759 | 1.31E-51 | -1.69E-46 |
| MS.gene052155 | MS.gene36285 | -0.812643 | 3.82E-51 | -1.69E-46 |
| MS.gene052242 | MS.gene36285 | -0.804136 | 2.50E-49 | -1.69E-46 |
| MS.gene05224 | MS.gene36285 | 0.801013 | 1.10E-48 | -1.69E-46 |
| MS.gene052307 | MS.gene36285 | 0.87612 | 1.80E-68 | -1.69E-46 |
| MS.gene052335 | MS.gene36285 | 0.83384 | 4.23E-56 | -1.69E-46 |
| MS.gene052514 | MS.gene36285 | 0.846617 | 1.94E-59 | -1.69E-46 |
| MS.gene052609 | MS.gene36285 | 0.917875 | 3.11E-86 | -1.69E-46 |
| MS.gene052732 | MS.gene36285 | 0.849515 | 3.08E-60 | -1.69E-46 |
| MS.gene052776 | MS.gene36285 | 0.819298 | 1.25E-52 | -1.69E-46 |
| MS.gene053079 | MS.gene36285 | 0.806289 | 8.84E-50 | -1.69E-46 |
| MS.gene053122 | MS.gene36285 | 0.803532 | 3.33E-49 | -1.69E-46 |
| MS.gene053143 | MS.gene36285 | 0.956986 | 8.04E-115 | -1.69E-46 |
| MS.gene053144 | MS.gene36285 | 0.874034 | 9.25E-68 | -1.69E-46 |
| MS.gene053171 | MS.gene36285 | 0.845619 | 3.63E-59 | -1.69E-46 |
| MS.gene053581 | MS.gene36285 | 0.845614 | 3.64E-59 | -1.69E-46 |
| MS.gene054554 | MS.gene36285 | 0.855895 | 4.64E-62 | -1.69E-46 |
| MS.gene054584 | MS.gene36285 | 0.86885 | 4.80E-66 | -1.69E-46 |
| MS.gene054585 | MS.gene36285 | 0.922285 | 1.20E-88 | -1.69E-46 |
| MS.gene054824 | MS.gene36285 | 0.893445 | 6.25E-75 | -1.69E-46 |
| MS.gene055144 | MS.gene36285 | 0.802275 | 6.06E-49 | -1.69E-46 |
| MS.gene055221 | MS.gene36285 | 0.804165 | 2.46E-49 | -1.69E-46 |
| MS.gene055465 | MS.gene36285 | 0.81165 | 6.29E-51 | -1.69E-46 |
| MS.gene055469 | MS.gene36285 | 0.864841 | 9.10E-65 | -1.69E-46 |
| MS.gene055513 | MS.gene36285 | 0.857683 | 1.38E-62 | -1.69E-46 |
| MS.gene055537 | MS.gene36285 | 0.827461 | 1.55E-54 | -1.69E-46 |
| MS.gene055580 | MS.gene36285 | -0.810298 | 1.24E-50 | -1.69E-46 |
| MS.gene055764 | MS.gene36285 | 0.84943 | 3.25E-60 | -1.69E-46 |
| MS.gene055975 | MS.gene36285 | 0.834442 | 2.99E-56 | -1.69E-46 |
| MS.gene056043 | MS.gene36285 | -0.812827 | 3.49E-51 | -1.69E-46 |
| MS.gene056181 | MS.gene36285 | 0.828262 | 9.91E-55 | -1.69E-46 |
| MS.gene056308 | MS.gene36285 | 0.867374 | 1.44E-65 | -1.69E-46 |
| MS.gene056507 | MS.gene36285 | 0.860047 | 2.71E-63 | -1.69E-46 |
| MS.gene056578 | MS.gene36285 | 0.817055 | 4.02E-52 | -1.69E-46 |
| MS.gene056881 | MS.gene36285 | 0.801164 | 1.02E-48 | -1.69E-46 |
| MS.gene057082 | MS.gene36285 | 0.800107 | 1.68E-48 | -1.69E-46 |
| MS.gene057213 | MS.gene36285 | 0.815448 | 9.20E-52 | -1.69E-46 |
| MS.gene057683 | MS.gene36285 | 0.803204 | 3.90E-49 | -1.69E-46 |
| MS.gene058149 | MS.gene36285 | 0.800055 | 1.72E-48 | -1.69E-46 |
| MS.gene058330 | MS.gene36285 | 0.820101 | 8.19E-53 | -1.69E-46 |
| MS.gene058492 | MS.gene36285 | 0.817811 | 2.72E-52 | -1.69E-46 |
| MS.gene058638 | MS.gene36285 | 0.847914 | 8.55E-60 | -1.69E-46 |
| MS.gene058639 | MS.gene36285 | 0.847562 | 1.07E-59 | -1.69E-46 |
| MS.gene058649 | MS.gene36285 | 0.873027 | 2.02E-67 | -1.69E-46 |
| MS.gene058668 | MS.gene36285 | 0.844647 | 6.64E-59 | -1.69E-46 |
| MS.gene05870 | MS.gene36285 | 0.830461 | 2.90E-55 | -1.69E-46 |
| MS.gene058720 | MS.gene36285 | 0.824097 | 9.71E-54 | -1.69E-46 |
| MS.gene058852 | MS.gene36285 | 0.841316 | 5.12E-58 | -1.69E-46 |
| MS.gene059007 | MS.gene36285 | 0.806876 | 6.65E-50 | -1.69E-46 |
| MS.gene059171 | MS.gene36285 | 0.862354 | 5.38E-64 | -1.69E-46 |
| MS.gene059227 | MS.gene36285 | 0.816025 | 6.84E-52 | -1.69E-46 |
| MS.gene05938 | MS.gene36285 | 0.804944 | 1.69E-49 | -1.69E-46 |
| MS.gene059778 | MS.gene36285 | 0.862902 | 3.65E-64 | -1.69E-46 |
| MS.gene059965 | MS.gene36285 | 0.80714 | 5.85E-50 | -1.69E-46 |
| MS.gene060342 | MS.gene36285 | -0.810486 | 1.13E-50 | -1.69E-46 |
| MS.gene060343 | MS.gene36285 | -0.832209 | 1.08E-55 | -1.69E-46 |
| MS.gene060603 | MS.gene36285 | 0.803256 | 3.80E-49 | -1.69E-46 |
| MS.gene061006 | MS.gene36285 | 0.893899 | 4.09E-75 | -1.69E-46 |
| MS.gene061100 | MS.gene36285 | 0.881019 | 3.40E-70 | -1.69E-46 |
| MS.gene06117 | MS.gene36285 | 0.820578 | 6.37E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene36285 | MS.gene033983 | PPI |
| MS.gene048825 | MS.gene36285 | PPI |
| MS.gene043038 | MS.gene36285 | PPI |
| MS.gene55710 | MS.gene36285 | PPI |
| MS.gene45784 | MS.gene36285 | PPI |
| MS.gene36285 | MS.gene75538 | PPI |
| MS.gene33357 | MS.gene36285 | PPI |
| MS.gene36285 | MS.gene79543 | PPI |
| MS.gene067071 | MS.gene36285 | PPI |
| MS.gene030373 | MS.gene36285 | PPI |
| MS.gene04018 | MS.gene36285 | PPI |
| MS.gene36285 | MS.gene045181 | PPI |
| MS.gene88038 | MS.gene36285 | PPI |
| MS.gene48744 | MS.gene36285 | PPI |
| MS.gene04503 | MS.gene36285 | PPI |
| MS.gene89100 | MS.gene36285 | PPI |
| MS.gene36285 | MS.gene55709 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36285.t1 | MTR_2g102277 | 99.129 | 918 | 8 | 0 | 1 | 918 | 1 | 918 | 0.0 | 1897 |
| MS.gene36285.t1 | MTR_2g102277 | 99.122 | 911 | 8 | 0 | 1 | 911 | 1 | 911 | 0.0 | 1883 |
| MS.gene36285.t1 | MTR_4g011950 | 90.150 | 934 | 74 | 4 | 1 | 919 | 1 | 931 | 0.0 | 1728 |
| MS.gene36285.t1 | MTR_4g006350 | 72.000 | 500 | 130 | 2 | 308 | 807 | 1 | 490 | 0.0 | 733 |
| MS.gene36285.t1 | MTR_2g102267 | 60.256 | 312 | 124 | 0 | 3 | 314 | 5 | 316 | 2.88e-140 | 422 |
| MS.gene36285.t1 | MTR_4g071130 | 25.579 | 821 | 511 | 25 | 10 | 772 | 4 | 782 | 3.84e-72 | 261 |
| MS.gene36285.t1 | MTR_1g090827 | 26.329 | 809 | 488 | 24 | 10 | 759 | 4 | 763 | 2.93e-71 | 258 |
| MS.gene36285.t1 | MTR_4g014050 | 72.289 | 83 | 17 | 1 | 286 | 362 | 802 | 884 | 6.10e-28 | 122 |
| MS.gene36285.t1 | MTR_4g119620 | 27.778 | 234 | 155 | 5 | 43 | 266 | 13 | 242 | 7.11e-25 | 107 |
| MS.gene36285.t1 | MTR_4g119620 | 26.984 | 252 | 136 | 7 | 51 | 256 | 72 | 321 | 1.22e-19 | 91.7 |
| MS.gene36285.t1 | MTR_4g119620 | 29.762 | 168 | 110 | 5 | 9 | 170 | 156 | 321 | 2.63e-12 | 69.7 |
| MS.gene36285.t1 | MTR_3g106080 | 28.846 | 208 | 138 | 5 | 94 | 299 | 414 | 613 | 1.20e-21 | 101 |
| MS.gene36285.t1 | MTR_3g106080 | 24.775 | 222 | 163 | 3 | 25 | 246 | 429 | 646 | 1.06e-15 | 82.4 |
| MS.gene36285.t1 | MTR_1g072140 | 25.106 | 235 | 171 | 4 | 44 | 277 | 14 | 244 | 1.46e-19 | 91.3 |
| MS.gene36285.t1 | MTR_1g072140 | 26.275 | 255 | 184 | 3 | 5 | 256 | 59 | 312 | 1.84e-19 | 90.9 |
| MS.gene36285.t1 | MTR_1g072140 | 32.716 | 162 | 106 | 2 | 136 | 297 | 21 | 179 | 2.69e-18 | 87.4 |
| MS.gene36285.t1 | MTR_6g004040 | 25.764 | 229 | 164 | 4 | 66 | 292 | 24 | 248 | 4.73e-18 | 90.1 |
| MS.gene36285.t1 | MTR_6g004040 | 29.885 | 174 | 117 | 4 | 91 | 263 | 8 | 177 | 1.12e-16 | 85.5 |
| MS.gene36285.t1 | MTR_8g106790 | 30.412 | 194 | 122 | 6 | 72 | 256 | 31 | 220 | 1.04e-17 | 85.9 |
| MS.gene36285.t1 | MTR_8g106790 | 25.091 | 275 | 170 | 9 | 8 | 256 | 56 | 320 | 1.30e-14 | 76.6 |
| MS.gene36285.t1 | MTR_2g436510 | 31.707 | 164 | 108 | 3 | 93 | 256 | 164 | 323 | 2.79e-17 | 86.7 |
| MS.gene36285.t1 | MTR_2g436510 | 21.339 | 239 | 183 | 4 | 18 | 256 | 173 | 406 | 5.44e-12 | 69.7 |
| MS.gene36285.t1 | MTR_2g012630 | 24.434 | 221 | 163 | 3 | 73 | 293 | 32 | 248 | 1.73e-16 | 85.5 |
| MS.gene36285.t1 | MTR_2g012630 | 26.389 | 216 | 149 | 4 | 39 | 251 | 40 | 248 | 6.74e-16 | 83.6 |
| MS.gene36285.t1 | MTR_2g012630 | 25.556 | 180 | 129 | 4 | 91 | 269 | 7 | 182 | 4.59e-14 | 77.4 |
| MS.gene36285.t1 | MTR_2g012630 | 24.434 | 221 | 163 | 3 | 73 | 293 | 32 | 248 | 2.50e-16 | 84.7 |
| MS.gene36285.t1 | MTR_2g012630 | 26.389 | 216 | 149 | 4 | 39 | 251 | 40 | 248 | 8.53e-16 | 83.2 |
| MS.gene36285.t1 | MTR_2g012630 | 25.556 | 180 | 129 | 4 | 91 | 269 | 7 | 182 | 6.80e-14 | 76.6 |
| MS.gene36285.t1 | MTR_2g016160 | 30.000 | 190 | 125 | 6 | 73 | 256 | 78 | 265 | 6.70e-16 | 80.5 |
| MS.gene36285.t1 | MTR_8g038550 | 25.926 | 243 | 169 | 7 | 18 | 256 | 186 | 421 | 4.38e-15 | 80.5 |
| MS.gene36285.t1 | MTR_3g045130 | 29.143 | 175 | 119 | 4 | 94 | 267 | 351 | 521 | 5.98e-15 | 79.3 |
| MS.gene36285.t1 | MTR_3g045130 | 26.136 | 176 | 124 | 4 | 82 | 256 | 297 | 467 | 4.37e-13 | 73.6 |
| MS.gene36285.t1 | MTR_4g105700 | 25.263 | 285 | 195 | 7 | 64 | 333 | 366 | 647 | 2.00e-14 | 78.6 |
| MS.gene36285.t1 | MTR_4g105700 | 25.000 | 264 | 180 | 7 | 11 | 260 | 398 | 657 | 4.03e-13 | 74.3 |
| MS.gene36285.t1 | MTR_4g105700 | 24.155 | 207 | 146 | 5 | 81 | 278 | 42 | 246 | 6.28e-13 | 73.6 |
| MS.gene36285.t1 | MTR_4g105700 | 31.217 | 189 | 102 | 9 | 99 | 267 | 8 | 188 | 4.16e-11 | 67.8 |
| MS.gene36285.t1 | MTR_5g016350 | 24.219 | 256 | 181 | 5 | 6 | 253 | 326 | 576 | 2.16e-14 | 77.8 |
| MS.gene36285.t1 | MTR_1g011610 | 24.658 | 219 | 145 | 6 | 49 | 256 | 597 | 806 | 2.22e-14 | 78.2 |
| MS.gene36285.t1 | MTR_1g054300 | 27.586 | 203 | 138 | 5 | 60 | 258 | 122 | 319 | 2.35e-14 | 77.4 |
| MS.gene36285.t1 | MTR_1g054300 | 32.558 | 129 | 78 | 5 | 134 | 256 | 111 | 236 | 3.28e-12 | 70.5 |
| MS.gene36285.t1 | MTR_1g054300 | 31.469 | 143 | 95 | 2 | 114 | 256 | 342 | 481 | 1.09e-11 | 68.9 |
| MS.gene36285.t1 | MTR_1g011610 | 24.658 | 219 | 145 | 6 | 49 | 256 | 606 | 815 | 2.39e-14 | 78.2 |
| MS.gene36285.t1 | MTR_5g016350 | 24.219 | 256 | 181 | 5 | 6 | 253 | 262 | 512 | 4.05e-14 | 76.6 |
| MS.gene36285.t1 | MTR_3g107910 | 24.000 | 200 | 130 | 4 | 65 | 256 | 629 | 814 | 4.63e-14 | 77.4 |
| MS.gene36285.t1 | MTR_3g107910 | 24.000 | 200 | 130 | 4 | 65 | 256 | 636 | 821 | 4.85e-14 | 77.0 |
| MS.gene36285.t1 | MTR_4g095058 | 24.444 | 270 | 179 | 5 | 13 | 268 | 285 | 543 | 1.38e-13 | 75.1 |
| MS.gene36285.t1 | MTR_4g095058 | 26.316 | 228 | 151 | 6 | 72 | 289 | 302 | 522 | 9.98e-12 | 69.3 |
| MS.gene36285.t1 | MTR_4g095058 | 24.444 | 270 | 179 | 5 | 13 | 268 | 287 | 545 | 1.51e-13 | 75.1 |
| MS.gene36285.t1 | MTR_4g095058 | 26.316 | 228 | 151 | 6 | 72 | 289 | 304 | 524 | 9.93e-12 | 69.3 |
| MS.gene36285.t1 | MTR_3g116500 | 23.529 | 255 | 178 | 4 | 60 | 297 | 68 | 322 | 1.60e-13 | 73.9 |
| MS.gene36285.t1 | MTR_1g097140 | 22.925 | 253 | 183 | 7 | 7 | 255 | 156 | 400 | 7.70e-13 | 72.0 |
| MS.gene36285.t1 | MTR_7g104550 | 27.660 | 235 | 138 | 11 | 89 | 297 | 6 | 234 | 1.01e-12 | 71.2 |
| MS.gene36285.t1 | MTR_4g069090 | 30.208 | 192 | 115 | 9 | 72 | 256 | 34 | 213 | 1.66e-12 | 72.0 |
| MS.gene36285.t1 | MTR_2g019400 | 29.032 | 155 | 99 | 3 | 102 | 256 | 1 | 144 | 2.72e-12 | 68.9 |
| MS.gene36285.t1 | MTR_5g016370 | 23.372 | 261 | 181 | 6 | 6 | 255 | 338 | 590 | 2.98e-12 | 70.9 |
| MS.gene36285.t1 | MTR_7g058460 | 23.923 | 209 | 153 | 3 | 60 | 268 | 510 | 712 | 5.38e-12 | 70.5 |
| MS.gene36285.t1 | MTR_7g058440 | 23.923 | 209 | 153 | 3 | 60 | 268 | 501 | 703 | 6.34e-12 | 70.1 |
| MS.gene36285.t1 | MTR_5g022690 | 24.757 | 206 | 152 | 2 | 9 | 214 | 273 | 475 | 8.84e-12 | 69.3 |
| MS.gene36285.t1 | MTR_5g022690 | 24.339 | 189 | 126 | 4 | 82 | 256 | 205 | 390 | 7.19e-11 | 66.2 |
| MS.gene36285.t1 | MTR_4g096880 | 24.631 | 203 | 131 | 5 | 30 | 221 | 194 | 385 | 1.07e-11 | 68.6 |
| MS.gene36285.t1 | MTR_1g089260 | 21.769 | 294 | 206 | 11 | 18 | 295 | 46 | 331 | 1.09e-11 | 68.9 |
| MS.gene36285.t1 | MTR_4g123597 | 22.483 | 298 | 206 | 8 | 12 | 295 | 404 | 690 | 1.23e-11 | 69.3 |
| MS.gene36285.t1 | MTR_4g123597 | 23.413 | 252 | 176 | 5 | 20 | 259 | 450 | 696 | 6.41e-11 | 67.0 |
| MS.gene36285.t1 | MTR_1g050340 | 22.500 | 200 | 133 | 4 | 65 | 256 | 518 | 703 | 1.74e-11 | 68.9 |
| MS.gene36285.t1 | MTR_1g050340 | 21.633 | 245 | 178 | 9 | 17 | 257 | 512 | 746 | 2.32e-11 | 68.6 |
| MS.gene36285.t1 | MTR_1g050340 | 22.500 | 200 | 133 | 4 | 65 | 256 | 517 | 702 | 1.77e-11 | 68.9 |
| MS.gene36285.t1 | MTR_1g050340 | 21.633 | 245 | 178 | 9 | 17 | 257 | 511 | 745 | 2.28e-11 | 68.6 |
| MS.gene36285.t1 | MTR_3g052220 | 28.659 | 164 | 106 | 4 | 101 | 256 | 216 | 376 | 2.84e-11 | 67.8 |
| MS.gene36285.t1 | MTR_7g086360 | 28.313 | 166 | 114 | 4 | 92 | 256 | 48 | 209 | 5.84e-11 | 65.9 |
| MS.gene36285.t1 | MTR_8g104010 | 27.027 | 185 | 128 | 5 | 72 | 256 | 563 | 740 | 8.24e-11 | 66.6 |
| MS.gene36285.t1 | MTR_8g104010 | 27.027 | 185 | 128 | 5 | 72 | 256 | 646 | 823 | 9.51e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36285.t1 | AT1G52360 | 85.684 | 929 | 114 | 2 | 1 | 917 | 1 | 922 | 0.0 | 1657 |
| MS.gene36285.t1 | AT1G52360 | 85.684 | 929 | 114 | 2 | 1 | 917 | 1 | 922 | 0.0 | 1657 |
| MS.gene36285.t1 | AT1G52360 | 85.668 | 928 | 114 | 2 | 2 | 917 | 46 | 966 | 0.0 | 1652 |
| MS.gene36285.t1 | AT1G52360 | 85.590 | 923 | 114 | 2 | 1 | 911 | 1 | 916 | 0.0 | 1644 |
| MS.gene36285.t1 | AT3G15980 | 85.823 | 917 | 127 | 1 | 1 | 917 | 1 | 914 | 0.0 | 1629 |
| MS.gene36285.t1 | AT3G15980 | 85.823 | 917 | 127 | 1 | 1 | 917 | 1 | 914 | 0.0 | 1629 |
| MS.gene36285.t1 | AT3G15980 | 85.823 | 917 | 127 | 1 | 1 | 917 | 1 | 914 | 0.0 | 1629 |
| MS.gene36285.t1 | AT3G15980 | 85.823 | 917 | 127 | 1 | 1 | 917 | 1 | 914 | 0.0 | 1629 |
| MS.gene36285.t1 | AT3G15980 | 86.169 | 911 | 123 | 1 | 1 | 911 | 1 | 908 | 0.0 | 1617 |
| MS.gene36285.t1 | AT1G79990 | 85.230 | 914 | 131 | 2 | 1 | 911 | 1 | 913 | 0.0 | 1612 |
| MS.gene36285.t1 | AT3G15980 | 86.313 | 906 | 121 | 1 | 1 | 906 | 1 | 903 | 0.0 | 1609 |
| MS.gene36285.t1 | AT1G79990 | 85.430 | 906 | 128 | 2 | 1 | 903 | 1 | 905 | 0.0 | 1599 |
| MS.gene36285.t1 | AT3G15980 | 83.100 | 929 | 142 | 3 | 1 | 917 | 1 | 926 | 0.0 | 1578 |
| MS.gene36285.t1 | AT2G21390 | 26.904 | 814 | 506 | 26 | 10 | 773 | 4 | 778 | 3.67e-77 | 276 |
| MS.gene36285.t1 | AT1G62020 | 26.691 | 813 | 507 | 26 | 10 | 772 | 4 | 777 | 1.01e-75 | 271 |
| MS.gene36285.t1 | AT3G49660 | 29.796 | 245 | 159 | 6 | 60 | 295 | 27 | 267 | 4.55e-26 | 110 |
| MS.gene36285.t1 | AT3G49660 | 26.638 | 229 | 166 | 2 | 29 | 256 | 85 | 312 | 1.98e-21 | 97.1 |
| MS.gene36285.t1 | AT3G49660 | 30.539 | 167 | 108 | 3 | 132 | 293 | 14 | 177 | 2.07e-16 | 82.0 |
| MS.gene36285.t1 | AT3G49660 | 26.506 | 166 | 116 | 4 | 9 | 170 | 149 | 312 | 2.24e-11 | 66.6 |
| MS.gene36285.t1 | AT5G25150 | 31.892 | 185 | 118 | 4 | 97 | 279 | 416 | 594 | 1.48e-20 | 97.8 |
| MS.gene36285.t1 | AT5G25150 | 26.341 | 205 | 147 | 3 | 11 | 215 | 414 | 614 | 2.79e-16 | 84.3 |
| MS.gene36285.t1 | AT5G25150 | 31.892 | 185 | 118 | 4 | 97 | 279 | 416 | 594 | 1.72e-20 | 97.8 |
| MS.gene36285.t1 | AT5G25150 | 26.341 | 205 | 147 | 3 | 11 | 215 | 414 | 614 | 3.15e-16 | 84.0 |
| MS.gene36285.t1 | AT1G11160 | 27.778 | 216 | 146 | 4 | 39 | 251 | 40 | 248 | 2.81e-19 | 94.4 |
| MS.gene36285.t1 | AT1G11160 | 29.310 | 174 | 118 | 4 | 91 | 263 | 7 | 176 | 1.37e-16 | 85.5 |
| MS.gene36285.t1 | AT1G11160 | 25.000 | 224 | 164 | 3 | 70 | 293 | 29 | 248 | 3.09e-16 | 84.3 |
| MS.gene36285.t1 | AT1G11160 | 23.923 | 209 | 154 | 4 | 18 | 226 | 61 | 264 | 5.63e-12 | 70.5 |
| MS.gene36285.t1 | AT1G11160 | 27.778 | 216 | 146 | 4 | 39 | 251 | 40 | 248 | 2.86e-19 | 94.4 |
| MS.gene36285.t1 | AT1G11160 | 29.310 | 174 | 118 | 4 | 91 | 263 | 7 | 176 | 1.41e-16 | 85.5 |
| MS.gene36285.t1 | AT1G11160 | 25.000 | 224 | 164 | 3 | 70 | 293 | 29 | 248 | 3.20e-16 | 84.3 |
| MS.gene36285.t1 | AT1G11160 | 23.923 | 209 | 154 | 4 | 18 | 226 | 61 | 264 | 6.08e-12 | 70.5 |
| MS.gene36285.t1 | AT1G11160 | 27.778 | 216 | 146 | 4 | 39 | 251 | 40 | 248 | 3.55e-19 | 94.0 |
| MS.gene36285.t1 | AT1G11160 | 29.310 | 174 | 118 | 4 | 91 | 263 | 7 | 176 | 1.60e-16 | 85.5 |
| MS.gene36285.t1 | AT1G11160 | 25.000 | 224 | 164 | 3 | 70 | 293 | 29 | 248 | 3.63e-16 | 84.3 |
| MS.gene36285.t1 | AT1G11160 | 23.923 | 209 | 154 | 4 | 18 | 226 | 61 | 264 | 7.03e-12 | 70.5 |
| MS.gene36285.t1 | AT1G18080 | 31.282 | 195 | 120 | 6 | 72 | 256 | 31 | 221 | 6.82e-19 | 89.7 |
| MS.gene36285.t1 | AT1G18080 | 22.744 | 277 | 176 | 9 | 8 | 256 | 56 | 322 | 4.54e-12 | 68.9 |
| MS.gene36285.t1 | AT4G02730 | 23.390 | 295 | 177 | 9 | 9 | 256 | 37 | 329 | 1.91e-18 | 88.2 |
| MS.gene36285.t1 | AT4G02730 | 24.691 | 243 | 177 | 4 | 36 | 277 | 24 | 261 | 3.65e-18 | 87.4 |
| MS.gene36285.t1 | AT1G71840 | 23.755 | 261 | 190 | 5 | 7 | 262 | 147 | 403 | 2.22e-18 | 89.4 |
| MS.gene36285.t1 | AT1G48630 | 28.571 | 231 | 147 | 7 | 72 | 286 | 31 | 259 | 5.02e-18 | 87.0 |
| MS.gene36285.t1 | AT5G23430 | 25.100 | 251 | 178 | 5 | 48 | 292 | 2 | 248 | 1.63e-17 | 88.6 |
| MS.gene36285.t1 | AT5G23430 | 25.100 | 251 | 178 | 5 | 48 | 292 | 2 | 248 | 1.63e-17 | 88.6 |
| MS.gene36285.t1 | AT5G23430 | 25.100 | 251 | 178 | 5 | 48 | 292 | 2 | 248 | 1.72e-17 | 88.2 |
| MS.gene36285.t1 | AT5G08390 | 24.597 | 248 | 177 | 5 | 51 | 292 | 5 | 248 | 2.03e-17 | 88.2 |
| MS.gene36285.t1 | AT3G18130 | 28.326 | 233 | 145 | 8 | 72 | 286 | 31 | 259 | 3.25e-17 | 84.3 |
| MS.gene36285.t1 | AT3G18130 | 21.691 | 272 | 184 | 7 | 8 | 256 | 56 | 321 | 1.50e-11 | 67.4 |
| MS.gene36285.t1 | AT5G13480 | 27.948 | 229 | 158 | 6 | 30 | 256 | 149 | 372 | 1.48e-16 | 85.1 |
| MS.gene36285.t1 | AT5G13480 | 27.948 | 229 | 158 | 6 | 30 | 256 | 138 | 361 | 2.02e-16 | 84.7 |
| MS.gene36285.t1 | AT5G13480 | 27.948 | 229 | 158 | 6 | 30 | 256 | 126 | 349 | 2.05e-16 | 84.3 |
| MS.gene36285.t1 | AT5G13480 | 27.948 | 229 | 158 | 6 | 30 | 256 | 126 | 349 | 2.19e-16 | 84.3 |
| MS.gene36285.t1 | AT4G15900 | 29.730 | 185 | 126 | 3 | 93 | 277 | 170 | 350 | 3.90e-16 | 83.2 |
| MS.gene36285.t1 | AT4G15900 | 27.041 | 196 | 139 | 3 | 60 | 255 | 179 | 370 | 8.25e-16 | 82.0 |
| MS.gene36285.t1 | AT4G15900 | 27.326 | 172 | 116 | 3 | 127 | 295 | 161 | 326 | 3.79e-14 | 76.6 |
| MS.gene36285.t1 | AT1G61210 | 27.835 | 194 | 130 | 4 | 60 | 250 | 61 | 247 | 8.25e-16 | 83.2 |
| MS.gene36285.t1 | AT1G61210 | 25.455 | 220 | 160 | 3 | 73 | 292 | 32 | 247 | 5.70e-15 | 80.5 |
| MS.gene36285.t1 | AT1G61210 | 27.011 | 174 | 122 | 4 | 91 | 263 | 7 | 176 | 3.77e-14 | 77.8 |
| MS.gene36285.t1 | AT3G16650 | 26.396 | 197 | 130 | 6 | 127 | 317 | 155 | 342 | 1.09e-15 | 81.6 |
| MS.gene36285.t1 | AT3G16650 | 30.488 | 164 | 109 | 4 | 93 | 256 | 164 | 322 | 1.27e-13 | 75.1 |
| MS.gene36285.t1 | AT3G16650 | 23.129 | 294 | 208 | 9 | 18 | 302 | 173 | 457 | 4.07e-11 | 67.0 |
| MS.gene36285.t1 | AT1G49040 | 28.877 | 187 | 126 | 4 | 72 | 258 | 912 | 1091 | 1.20e-15 | 82.8 |
| MS.gene36285.t1 | AT1G61210 | 27.835 | 194 | 130 | 4 | 60 | 250 | 61 | 247 | 2.08e-15 | 82.0 |
| MS.gene36285.t1 | AT1G61210 | 25.455 | 220 | 160 | 3 | 73 | 292 | 32 | 247 | 1.48e-14 | 79.0 |
| MS.gene36285.t1 | AT1G61210 | 27.011 | 174 | 122 | 4 | 91 | 263 | 7 | 176 | 9.00e-14 | 76.6 |
| MS.gene36285.t1 | AT1G61210 | 27.835 | 194 | 130 | 4 | 60 | 250 | 61 | 247 | 2.10e-15 | 82.0 |
| MS.gene36285.t1 | AT1G61210 | 25.455 | 220 | 160 | 3 | 73 | 292 | 32 | 247 | 1.41e-14 | 79.3 |
| MS.gene36285.t1 | AT1G61210 | 27.011 | 174 | 122 | 4 | 91 | 263 | 7 | 176 | 8.55e-14 | 76.6 |
| MS.gene36285.t1 | AT1G11160 | 26.904 | 197 | 140 | 3 | 97 | 293 | 14 | 206 | 4.21e-15 | 80.9 |
| MS.gene36285.t1 | AT1G11160 | 31.538 | 130 | 86 | 2 | 134 | 263 | 8 | 134 | 2.69e-13 | 74.7 |
| MS.gene36285.t1 | AT1G11160 | 23.923 | 209 | 154 | 4 | 18 | 226 | 19 | 222 | 7.08e-12 | 70.1 |
| MS.gene36285.t1 | AT1G29260 | 29.703 | 202 | 131 | 7 | 72 | 267 | 76 | 272 | 5.93e-15 | 77.4 |
| MS.gene36285.t1 | AT3G18860 | 30.769 | 195 | 113 | 9 | 72 | 256 | 34 | 216 | 1.15e-14 | 79.0 |
| MS.gene36285.t1 | AT3G18860 | 30.769 | 195 | 113 | 9 | 72 | 256 | 34 | 216 | 1.21e-14 | 79.0 |
| MS.gene36285.t1 | AT2G26060 | 27.273 | 231 | 141 | 10 | 91 | 297 | 12 | 239 | 3.24e-14 | 75.5 |
| MS.gene36285.t1 | AT2G26060 | 27.273 | 231 | 141 | 10 | 91 | 297 | 12 | 239 | 3.65e-14 | 75.5 |
| MS.gene36285.t1 | AT5G16750 | 22.837 | 289 | 162 | 8 | 64 | 295 | 365 | 649 | 4.78e-14 | 77.4 |
| MS.gene36285.t1 | AT5G16750 | 23.504 | 234 | 164 | 5 | 38 | 260 | 427 | 656 | 4.63e-12 | 70.9 |
| MS.gene36285.t1 | AT3G21540 | 32.432 | 148 | 96 | 3 | 120 | 267 | 85 | 228 | 1.37e-13 | 75.9 |
| MS.gene36285.t1 | AT5G52820 | 25.463 | 216 | 149 | 5 | 43 | 254 | 99 | 306 | 3.55e-13 | 73.6 |
| MS.gene36285.t1 | AT5G52820 | 30.769 | 143 | 96 | 2 | 114 | 256 | 332 | 471 | 3.22e-12 | 70.5 |
| MS.gene36285.t1 | AT1G73720 | 29.341 | 167 | 108 | 3 | 101 | 260 | 215 | 378 | 5.74e-13 | 73.2 |
| MS.gene36285.t1 | AT1G73720 | 29.825 | 171 | 108 | 4 | 63 | 225 | 219 | 385 | 1.82e-12 | 71.6 |
| MS.gene36285.t1 | AT2G43770 | 23.276 | 232 | 124 | 7 | 72 | 253 | 111 | 338 | 4.93e-12 | 68.9 |
| MS.gene36285.t1 | AT3G20740 | 30.682 | 176 | 90 | 7 | 71 | 219 | 100 | 270 | 7.89e-12 | 68.6 |
| MS.gene36285.t1 | AT2G41500 | 24.096 | 249 | 185 | 4 | 11 | 259 | 294 | 538 | 9.71e-12 | 69.3 |
| MS.gene36285.t1 | AT2G41500 | 24.096 | 249 | 185 | 4 | 11 | 259 | 294 | 538 | 9.71e-12 | 69.3 |
| MS.gene36285.t1 | AT2G47410 | 24.352 | 193 | 128 | 5 | 89 | 265 | 44 | 234 | 2.61e-11 | 68.6 |
| MS.gene36285.t1 | AT2G47410 | 24.227 | 194 | 129 | 5 | 89 | 266 | 225 | 416 | 3.05e-11 | 68.6 |
| MS.gene36285.t1 | AT2G47410 | 24.227 | 194 | 129 | 5 | 89 | 266 | 226 | 417 | 3.18e-11 | 68.2 |
| MS.gene36285.t1 | AT5G42010 | 29.921 | 127 | 85 | 3 | 138 | 264 | 359 | 481 | 4.69e-11 | 67.0 |
| MS.gene36285.t1 | AT5G58230 | 23.645 | 203 | 133 | 5 | 30 | 221 | 194 | 385 | 8.52e-11 | 65.9 |
| MS.gene36285.t1 | AT2G33340 | 26.316 | 190 | 136 | 3 | 69 | 256 | 234 | 421 | 9.04e-11 | 65.9 |
Find 0 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 15227 | gene | 80753 | 91424 | 80753 | ID=MS.gene36285 |
| 15227 | mRNA | 80753 | 91424 | 80753 | ID=MS.gene36285.t1;Parent=MS.gene36285 |
| 15227 | exon | 91422 | 91424 | 91422 | ID=MS.gene36285.t1.exon1;Parent=MS.gene36285.t1 |
| 15227 | CDS | 91422 | 91424 | 91422 | ID=cds.MS.gene36285.t1;Parent=MS.gene36285.t1 |
| 15227 | exon | 91187 | 91207 | 91187 | ID=MS.gene36285.t1.exon2;Parent=MS.gene36285.t1 |
| 15227 | CDS | 91187 | 91207 | 91187 | ID=cds.MS.gene36285.t1;Parent=MS.gene36285.t1 |
| 15227 | exon | 91014 | 91075 | 91014 | ID=MS.gene36285.t1.exon3;Parent=MS.gene36285.t1 |
| 15227 | CDS | 91014 | 91075 | 91014 | ID=cds.MS.gene36285.t1;Parent=MS.gene36285.t1 |
| 15227 | exon | 90475 | 90529 | 90475 | ID=MS.gene36285.t1.exon4;Parent=MS.gene36285.t1 |
| 15227 | CDS | 90475 | 90529 | 90475 | ID=cds.MS.gene36285.t1;Parent=MS.gene36285.t1 |
| 15227 | exon | 89737 | 89773 | 89737 | ID=MS.gene36285.t1.exon5;Parent=MS.gene36285.t1 |
| 15227 | CDS | 89737 | 89773 | 89737 | ID=cds.MS.gene36285.t1;Parent=MS.gene36285.t1 |
| 15227 | exon | 89254 | 89579 | 89254 | ID=MS.gene36285.t1.exon6;Parent=MS.gene36285.t1 |
| 15227 | CDS | 89254 | 89579 | 89254 | ID=cds.MS.gene36285.t1;Parent=MS.gene36285.t1 |
| 15227 | exon | 89020 | 89151 | 89020 | ID=MS.gene36285.t1.exon7;Parent=MS.gene36285.t1 |
| 15227 | CDS | 89020 | 89151 | 89020 | ID=cds.MS.gene36285.t1;Parent=MS.gene36285.t1 |
| 15227 | exon | 88562 | 88710 | 88562 | ID=MS.gene36285.t1.exon8;Parent=MS.gene36285.t1 |
| 15227 | CDS | 88562 | 88710 | 88562 | ID=cds.MS.gene36285.t1;Parent=MS.gene36285.t1 |
| 15227 | exon | 88176 | 88244 | 88176 | ID=MS.gene36285.t1.exon9;Parent=MS.gene36285.t1 |
| 15227 | CDS | 88176 | 88244 | 88176 | ID=cds.MS.gene36285.t1;Parent=MS.gene36285.t1 |
| 15227 | exon | 87854 | 88004 | 87854 | ID=MS.gene36285.t1.exon10;Parent=MS.gene36285.t1 |
| 15227 | CDS | 87854 | 88004 | 87854 | ID=cds.MS.gene36285.t1;Parent=MS.gene36285.t1 |
| 15227 | exon | 87696 | 87761 | 87696 | ID=MS.gene36285.t1.exon11;Parent=MS.gene36285.t1 |
| 15227 | CDS | 87696 | 87761 | 87696 | ID=cds.MS.gene36285.t1;Parent=MS.gene36285.t1 |
| 15227 | exon | 87053 | 87241 | 87053 | ID=MS.gene36285.t1.exon12;Parent=MS.gene36285.t1 |
| 15227 | CDS | 87053 | 87241 | 87053 | ID=cds.MS.gene36285.t1;Parent=MS.gene36285.t1 |
| 15227 | exon | 86175 | 86315 | 86175 | ID=MS.gene36285.t1.exon13;Parent=MS.gene36285.t1 |
| 15227 | CDS | 86175 | 86315 | 86175 | ID=cds.MS.gene36285.t1;Parent=MS.gene36285.t1 |
| 15227 | exon | 86020 | 86094 | 86020 | ID=MS.gene36285.t1.exon14;Parent=MS.gene36285.t1 |
| 15227 | CDS | 86020 | 86094 | 86020 | ID=cds.MS.gene36285.t1;Parent=MS.gene36285.t1 |
| 15227 | exon | 85724 | 85900 | 85724 | ID=MS.gene36285.t1.exon15;Parent=MS.gene36285.t1 |
| 15227 | CDS | 85724 | 85900 | 85724 | ID=cds.MS.gene36285.t1;Parent=MS.gene36285.t1 |
| 15227 | exon | 85545 | 85636 | 85545 | ID=MS.gene36285.t1.exon16;Parent=MS.gene36285.t1 |
| 15227 | CDS | 85545 | 85636 | 85545 | ID=cds.MS.gene36285.t1;Parent=MS.gene36285.t1 |
| 15227 | exon | 85341 | 85457 | 85341 | ID=MS.gene36285.t1.exon17;Parent=MS.gene36285.t1 |
| 15227 | CDS | 85341 | 85457 | 85341 | ID=cds.MS.gene36285.t1;Parent=MS.gene36285.t1 |
| 15227 | exon | 84678 | 84792 | 84678 | ID=MS.gene36285.t1.exon18;Parent=MS.gene36285.t1 |
| 15227 | CDS | 84678 | 84792 | 84678 | ID=cds.MS.gene36285.t1;Parent=MS.gene36285.t1 |
| 15227 | exon | 84465 | 84536 | 84465 | ID=MS.gene36285.t1.exon19;Parent=MS.gene36285.t1 |
| 15227 | CDS | 84465 | 84536 | 84465 | ID=cds.MS.gene36285.t1;Parent=MS.gene36285.t1 |
| 15227 | exon | 83685 | 83881 | 83685 | ID=MS.gene36285.t1.exon20;Parent=MS.gene36285.t1 |
| 15227 | CDS | 83685 | 83881 | 83685 | ID=cds.MS.gene36285.t1;Parent=MS.gene36285.t1 |
| 15227 | exon | 83502 | 83595 | 83502 | ID=MS.gene36285.t1.exon21;Parent=MS.gene36285.t1 |
| 15227 | CDS | 83502 | 83595 | 83502 | ID=cds.MS.gene36285.t1;Parent=MS.gene36285.t1 |
| 15227 | exon | 82578 | 82684 | 82578 | ID=MS.gene36285.t1.exon22;Parent=MS.gene36285.t1 |
| 15227 | CDS | 82578 | 82684 | 82578 | ID=cds.MS.gene36285.t1;Parent=MS.gene36285.t1 |
| 15227 | exon | 82321 | 82450 | 82321 | ID=MS.gene36285.t1.exon23;Parent=MS.gene36285.t1 |
| 15227 | CDS | 82321 | 82450 | 82321 | ID=cds.MS.gene36285.t1;Parent=MS.gene36285.t1 |
| 15227 | exon | 81995 | 82173 | 81995 | ID=MS.gene36285.t1.exon24;Parent=MS.gene36285.t1 |
| 15227 | CDS | 81995 | 82173 | 81995 | ID=cds.MS.gene36285.t1;Parent=MS.gene36285.t1 |
| 15227 | exon | 81232 | 81297 | 81232 | ID=MS.gene36285.t1.exon25;Parent=MS.gene36285.t1 |
| 15227 | CDS | 81232 | 81297 | 81232 | ID=cds.MS.gene36285.t1;Parent=MS.gene36285.t1 |
| 15227 | exon | 80753 | 80888 | 80753 | ID=MS.gene36285.t1.exon26;Parent=MS.gene36285.t1 |
| 15227 | CDS | 80753 | 80888 | 80753 | ID=cds.MS.gene36285.t1;Parent=MS.gene36285.t1 |
| Gene Sequence |
| Protein sequence |
