Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065791.t1 | XP_013456629.1 | 97.1 | 342 | 7 | 1 | 1 | 339 | 1 | 342 | 1.90E-169 | 605.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065791.t1 | Q9FNY2 | 67.4 | 291 | 61 | 5 | 82 | 339 | 96 | 385 | 2.7e-95 | 350.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065791.t1 | A0A072UXQ9 | 97.1 | 342 | 7 | 1 | 1 | 339 | 1 | 342 | 1.4e-169 | 605.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049230 | MS.gene065791 | 0.814862 | 1.24E-51 | -1.69E-46 |
| MS.gene049378 | MS.gene065791 | 0.80853 | 2.96E-50 | -1.69E-46 |
| MS.gene050105 | MS.gene065791 | 0.826196 | 3.10E-54 | -1.69E-46 |
| MS.gene050826 | MS.gene065791 | 0.815469 | 9.10E-52 | -1.69E-46 |
| MS.gene050941 | MS.gene065791 | 0.824662 | 7.15E-54 | -1.69E-46 |
| MS.gene051122 | MS.gene065791 | 0.831578 | 1.54E-55 | -1.69E-46 |
| MS.gene052012 | MS.gene065791 | 0.808403 | 3.15E-50 | -1.69E-46 |
| MS.gene052674 | MS.gene065791 | 0.802591 | 5.22E-49 | -1.69E-46 |
| MS.gene052677 | MS.gene065791 | 0.80534 | 1.40E-49 | -1.69E-46 |
| MS.gene053008 | MS.gene065791 | 0.80555 | 1.26E-49 | -1.69E-46 |
| MS.gene054479 | MS.gene065791 | 0.820626 | 6.21E-53 | -1.69E-46 |
| MS.gene05510 | MS.gene065791 | 0.828831 | 7.22E-55 | -1.69E-46 |
| MS.gene055623 | MS.gene065791 | 0.800333 | 1.51E-48 | -1.69E-46 |
| MS.gene055701 | MS.gene065791 | 0.827876 | 1.23E-54 | -1.69E-46 |
| MS.gene056480 | MS.gene065791 | 0.805653 | 1.20E-49 | -1.69E-46 |
| MS.gene058081 | MS.gene065791 | 0.800591 | 1.34E-48 | -1.69E-46 |
| MS.gene058146 | MS.gene065791 | 0.80765 | 4.56E-50 | -1.69E-46 |
| MS.gene058223 | MS.gene065791 | -0.822287 | 2.57E-53 | -1.69E-46 |
| MS.gene059161 | MS.gene065791 | 0.800168 | 1.64E-48 | -1.69E-46 |
| MS.gene059283 | MS.gene065791 | 0.8285 | 8.69E-55 | -1.69E-46 |
| MS.gene059952 | MS.gene065791 | 0.830527 | 2.79E-55 | -1.69E-46 |
| MS.gene060802 | MS.gene065791 | 0.815333 | 9.75E-52 | -1.69E-46 |
| MS.gene060803 | MS.gene065791 | 0.832379 | 9.78E-56 | -1.69E-46 |
| MS.gene060851 | MS.gene065791 | 0.800643 | 1.31E-48 | -1.69E-46 |
| MS.gene06121 | MS.gene065791 | 0.8156 | 8.51E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 87 sgRNAs with CRISPR-Local
Find 271 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCTCAAGGCAATGGATTT+TGG | 0.207282 | 4.4:-32785187 | MS.gene065791:CDS |
| TCCACTCCCTGGAATATTAA+AGG | 0.271571 | 4.4:-32785026 | MS.gene065791:CDS |
| GGTTGTGGAACTACGCTTTC+CGG | 0.284948 | 4.4:-32788817 | MS.gene065791:CDS |
| TATTATTGCTACAAGTTTGT+AGG | 0.286595 | 4.4:-32786177 | MS.gene065791:intron |
| ATTGTTCATTTCGTTGAATA+AGG | 0.299922 | 4.4:+32786145 | None:intergenic |
| TATACCTGAACCAGAATAAA+AGG | 0.312486 | 4.4:+32786081 | None:intergenic |
| ACTCTTGCCTTTAATATTCC+AGG | 0.333887 | 4.4:+32785019 | None:intergenic |
| TGATGCTCTGAATGTTCTTA+TGG | 0.333958 | 4.4:-32786596 | MS.gene065791:CDS |
| AACCTTTCATACTAAATTGC+CGG | 0.339281 | 4.4:+32787820 | None:intergenic |
| TGGTGGTTTGTCCCCTGATC+AGG | 0.346346 | 4.4:-32786762 | MS.gene065791:intron |
| CAGTTTCAAACATGTTAGTT+AGG | 0.354238 | 4.4:-32785063 | MS.gene065791:CDS |
| TCCTGCTGGTTGAGCCTGAT+TGG | 0.355296 | 4.4:+32788794 | None:intergenic |
| GAAGATAAGAAAACCTGATC+AGG | 0.380867 | 4.4:+32786749 | None:intergenic |
| ATGATGACGATGCTGCTTCC+AGG | 0.383165 | 4.4:-32788681 | MS.gene065791:CDS |
| CGAAGAGGACGAGGAATTGA+TGG | 0.402627 | 4.4:-32788839 | MS.gene065791:CDS |
| ACTACGCTTTCCGGCCAATC+AGG | 0.405110 | 4.4:-32788808 | MS.gene065791:CDS |
| GGCTCAACCAGCAGGAGTGC+CGG | 0.417822 | 4.4:-32788787 | MS.gene065791:CDS |
| TTAAATAGACACAGCGTCTT+GGG | 0.420475 | 4.4:-32786395 | MS.gene065791:intron |
| GCCTTTAATATTCCAGGGAG+TGG | 0.432840 | 4.4:+32785025 | None:intergenic |
| AGACACAGCGTCTTGGGCTT+AGG | 0.448668 | 4.4:-32786389 | MS.gene065791:CDS |
| TCCTCATGCAACTGTGGAAG+TGG | 0.457569 | 4.4:-32785556 | MS.gene065791:CDS |
| ATTAAATAGACACAGCGTCT+TGG | 0.463317 | 4.4:-32786396 | MS.gene065791:intron |
| GGGGAAGGTTCTAGCATGTC+AGG | 0.468504 | 4.4:-32785112 | MS.gene065791:CDS |
| GCCAATCAGGCTCAACCAGC+AGG | 0.469228 | 4.4:-32788795 | MS.gene065791:CDS |
| GACGAGGAATTGATGGGTTG+TGG | 0.469944 | 4.4:-32788832 | MS.gene065791:CDS |
| GGCTATGAATATTATTTCCA+AGG | 0.477616 | 4.4:-32786575 | MS.gene065791:CDS |
| AGGTAAAGATACACCTCCAC+TGG | 0.479385 | 4.4:+32786101 | None:intergenic |
| CTGCTCAAGCTCCTGCAGAT+AGG | 0.480130 | 4.4:+32786344 | None:intergenic |
| GCTCAACCAGCAGGAGTGCC+GGG | 0.480925 | 4.4:-32788786 | MS.gene065791:CDS |
| GAGTGATATTGAAGAACTAA+AGG | 0.483152 | 4.4:-32786509 | MS.gene065791:intron |
| CTCCGGCAATTTAGTATGAA+AGG | 0.485877 | 4.4:-32787822 | MS.gene065791:intron |
| CGGTAACCCGGCACTCCTGC+TGG | 0.489023 | 4.4:+32788780 | None:intergenic |
| GCTGGTTGAGCCTGATTGGC+CGG | 0.493558 | 4.4:+32788798 | None:intergenic |
| AATGAACAATTATATAGCTC+AGG | 0.501710 | 4.4:-32786132 | MS.gene065791:CDS |
| AGCCGGAGTGAGCAGACCAC+GGG | 0.509849 | 4.4:-32788754 | MS.gene065791:CDS |
| GGGGACAAACCACCATTGCT+TGG | 0.511216 | 4.4:+32786770 | None:intergenic |
| ATAAGAATGGAAGAGGGCTC+CGG | 0.512718 | 4.4:-32787839 | MS.gene065791:CDS |
| GTCCGTGGACGAAGAGGACG+AGG | 0.514783 | 4.4:-32788848 | MS.gene065791:CDS |
| CTCTTGCCTTTAATATTCCA+GGG | 0.515553 | 4.4:+32785020 | None:intergenic |
| TGTGAGAAGGTAGAAAGTAA+AGG | 0.516897 | 4.4:-32787309 | MS.gene065791:CDS |
| CAATTATGTTCTCAAGGCAA+TGG | 0.525211 | 4.4:-32785194 | MS.gene065791:CDS |
| CCGACATCACCTCCACTCCC+TGG | 0.527073 | 4.4:-32785037 | MS.gene065791:CDS |
| TTCCTCGTCCTCTTCGTCCA+CGG | 0.529381 | 4.4:+32788846 | None:intergenic |
| GTCAGGCATGTATCAATCAC+AGG | 0.555543 | 4.4:-32785095 | MS.gene065791:CDS |
| TTGTCGTCATGCAGCTCGAA+AGG | 0.559999 | 4.4:+32785214 | None:intergenic |
| AAGATAAGAAAACCTGATCA+GGG | 0.563158 | 4.4:+32786750 | None:intergenic |
| CACACAATATTGCGGATGGA+GGG | 0.564114 | 4.4:-32785132 | MS.gene065791:CDS |
| GGCTTAGGAGTAGAATTGAA+AGG | 0.565800 | 4.4:-32786374 | MS.gene065791:CDS |
| TTTAATATTCCAGGGAGTGG+AGG | 0.566833 | 4.4:+32785028 | None:intergenic |
| GTCTGCTCACTCCGGCTAGA+CGG | 0.569869 | 4.4:+32788760 | None:intergenic |
| TTTGAGAGCAGCGTTATCAC+CGG | 0.570401 | 4.4:+32788723 | None:intergenic |
| CAGACCACGGGGACAGCCGC+CGG | 0.573222 | 4.4:-32788742 | MS.gene065791:CDS |
| GTGCCGGGTTACCGTCTAGC+CGG | 0.573556 | 4.4:-32788771 | MS.gene065791:CDS |
| AAGGAAAGCAGCCTATCTGC+AGG | 0.574961 | 4.4:-32786355 | MS.gene065791:CDS |
| AATATTGCGGATGGAGGGGA+AGG | 0.575401 | 4.4:-32785127 | MS.gene065791:CDS |
| TTCTTCAATATCACTCAGAC+TGG | 0.575701 | 4.4:+32786516 | None:intergenic |
| CCAGGGAGTGGAGGTGATGT+CGG | 0.580031 | 4.4:+32785037 | None:intergenic |
| ACACAATATTGCGGATGGAG+GGG | 0.585147 | 4.4:-32785131 | MS.gene065791:CDS |
| TCCCCGTGGTCTGCTCACTC+CGG | 0.599110 | 4.4:+32788752 | None:intergenic |
| ACACACAATATTGCGGATGG+AGG | 0.602906 | 4.4:-32785133 | MS.gene065791:CDS |
| GAAGAGGACGAGGAATTGAT+GGG | 0.603441 | 4.4:-32788838 | MS.gene065791:CDS |
| TGACGACAATTATGTTCTCA+AGG | 0.607641 | 4.4:-32785200 | MS.gene065791:CDS |
| TCCACTTCCACAGTTGCATG+AGG | 0.608745 | 4.4:+32785555 | None:intergenic |
| GTTACACACAATATTGCGGA+TGG | 0.615879 | 4.4:-32785136 | MS.gene065791:CDS |
| GGGAGTGGAGGTGATGTCGG+AGG | 0.628434 | 4.4:+32785040 | None:intergenic |
| TCAATCGTCCGTGGACGAAG+AGG | 0.631369 | 4.4:-32788854 | MS.gene065791:CDS |
| CAATGTTACACACAATATTG+CGG | 0.641067 | 4.4:-32785140 | MS.gene065791:CDS |
| TCAGGAAATCCTCCCAGTGG+AGG | 0.644133 | 4.4:-32786114 | MS.gene065791:CDS |
| GACACGTCCTCATGCAACTG+TGG | 0.649899 | 4.4:-32785562 | MS.gene065791:CDS |
| TAGCCGGAGTGAGCAGACCA+CGG | 0.651050 | 4.4:-32788755 | MS.gene065791:CDS |
| TGTGTAACATTGTCACTCTG+TGG | 0.651492 | 4.4:+32785151 | None:intergenic |
| ATCACCGGCGGCTGTCCCCG+TGG | 0.656058 | 4.4:+32788738 | None:intergenic |
| ACTCCGGCTAGACGGTAACC+CGG | 0.657214 | 4.4:+32788768 | None:intergenic |
| AGGAAGAACAACTTACAATG+AGG | 0.663086 | 4.4:-32787289 | MS.gene065791:intron |
| GAGCATCATAGACCCTTCGA+CGG | 0.678223 | 4.4:+32786611 | None:intergenic |
| GGTAAAGATACACCTCCACT+GGG | 0.679973 | 4.4:+32786102 | None:intergenic |
| AGCTCAGGAAATCCTCCCAG+TGG | 0.682103 | 4.4:-32786117 | MS.gene065791:CDS |
| GCAGCCGCATCAATCGTCCG+TGG | 0.683605 | 4.4:-32788863 | MS.gene065791:CDS |
| AGATAAGAAAACCTGATCAG+GGG | 0.686331 | 4.4:+32786751 | None:intergenic |
| ATAGGTGGCAGATGAACTTG+TGG | 0.689893 | 4.4:-32786807 | MS.gene065791:intron |
| AACATGTTTGAAACTGACTG+AGG | 0.695881 | 4.4:+32785070 | None:intergenic |
| TCGTCCACGGACGATTGATG+CGG | 0.696336 | 4.4:+32788859 | None:intergenic |
| GAGAGCAGCGTTATCACCGG+CGG | 0.697043 | 4.4:+32788726 | None:intergenic |
| GGGGTGATAAGAATGGAAGA+GGG | 0.716134 | 4.4:-32787845 | MS.gene065791:CDS |
| AAAGATACACCTCCACTGGG+AGG | 0.724160 | 4.4:+32786105 | None:intergenic |
| ATATCACTCAGACTGGTACG+AGG | 0.734989 | 4.4:+32786523 | None:intergenic |
| GCCGGAGTGAGCAGACCACG+GGG | 0.739516 | 4.4:-32788753 | MS.gene065791:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAAAATTTTTTTTTTT+AGG | + | chr4.4:32787055-32787036 | None:intergenic | 0.0% |
| !!! | TTTTTTTTTTTTTTAAATAT+AGG | - | chr4.4:32787050-32787069 | MS.gene065791:intron | 0.0% |
| !! | AAGTATAGATATAAATAAAA+AGG | + | chr4.4:32785889-32785908 | None:intergenic | 10.0% |
| !!! | ATTTTTTTTTTTAGGAAATA+AGG | + | chr4.4:32787026-32787045 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTAAATATAGG+TGG | - | chr4.4:32787053-32787072 | MS.gene065791:intron | 10.0% |
| !! | TTATTTATATCTATACTTTG+TGG | - | chr4.4:32785891-32785910 | MS.gene065791:intron | 15.0% |
| !!! | AAATAATTTTCCCTTTTTTT+GGG | - | chr4.4:32788033-32788052 | MS.gene065791:intron | 15.0% |
| !!! | ATCTTATGAACTTATTTTTT+TGG | - | chr4.4:32787199-32787218 | MS.gene065791:intron | 15.0% |
| !!! | TCTTATGAACTTATTTTTTT+GGG | - | chr4.4:32787200-32787219 | MS.gene065791:intron | 15.0% |
| !! | AAAAAAGAAATACAATGGAA+GGG | - | chr4.4:32787325-32787344 | MS.gene065791:intron | 20.0% |
| !! | AATTAACCACTAATTAATTC+AGG | + | chr4.4:32785646-32785665 | None:intergenic | 20.0% |
| !! | AATTTAAAAAATAGCAATCC+AGG | + | chr4.4:32787603-32787622 | None:intergenic | 20.0% |
| !! | AGGATAAAAAAGAAATACAA+TGG | - | chr4.4:32787320-32787339 | MS.gene065791:intron | 20.0% |
| !! | ATGTAATATATTATCATCCA+AGG | + | chr4.4:32787883-32787902 | None:intergenic | 20.0% |
| !! | CCTATTAAAAAACTAATTGA+AGG | + | chr4.4:32786837-32786856 | None:intergenic | 20.0% |
| !! | GAATTAATTAGTGGTTAATT+TGG | - | chr4.4:32785646-32785665 | MS.gene065791:intron | 20.0% |
| !! | TAAAAAAGAAATACAATGGA+AGG | - | chr4.4:32787324-32787343 | MS.gene065791:intron | 20.0% |
| !! | TAAAAAGTTAAAGATCAAAG+TGG | + | chr4.4:32786100-32786119 | None:intergenic | 20.0% |
| !! | TAAGAATCAATCGAAAATAA+TGG | + | chr4.4:32785961-32785980 | None:intergenic | 20.0% |
| !! | TATAAATCCAATTTCATGTT+TGG | - | chr4.4:32785300-32785319 | MS.gene065791:intron | 20.0% |
| !! | TTAAAACCTGAATTAATTAG+TGG | - | chr4.4:32785637-32785656 | MS.gene065791:intron | 20.0% |
| !! | TTCATTGCAAAATTAATTAG+TGG | - | chr4.4:32785738-32785757 | MS.gene065791:intron | 20.0% |
| !! | TTCTATAAATACATACATGT+TGG | - | chr4.4:32786759-32786778 | MS.gene065791:intron | 20.0% |
| !! | TTTATTCAAGGTCTAAAAAA+TGG | - | chr4.4:32785481-32785500 | MS.gene065791:intron | 20.0% |
| !!! | AAAAAACTGGTTTAAAGTAA+AGG | + | chr4.4:32786617-32786636 | None:intergenic | 20.0% |
| !!! | AAGATTTTCAATTAGTGAAA+AGG | - | chr4.4:32785407-32785426 | MS.gene065791:intron | 20.0% |
| !!! | CCTTCAATTAGTTTTTTAAT+AGG | - | chr4.4:32786834-32786853 | MS.gene065791:intron | 20.0% |
| !!! | CTTATGAACTTATTTTTTTG+GGG | - | chr4.4:32787201-32787220 | MS.gene065791:intron | 20.0% |
| !!! | GAAATAATTTTCCCTTTTTT+TGG | - | chr4.4:32788032-32788051 | MS.gene065791:intron | 20.0% |
| !!! | TATTTGCTATTTACACATTA+AGG | - | chr4.4:32787166-32787185 | MS.gene065791:intron | 20.0% |
| !!! | TTGTATTTCTTTTTTATCCT+TGG | + | chr4.4:32787320-32787339 | None:intergenic | 20.0% |
| !!! | TTGTTCATTTTGATTTCAAT+AGG | - | chr4.4:32788363-32788382 | MS.gene065791:intron | 20.0% |
| ! | AAATCAACAGTAAATTAGAG+AGG | + | chr4.4:32786537-32786556 | None:intergenic | 25.0% |
| ! | AATAAAAACAGAGAATTGAC+AGG | + | chr4.4:32785927-32785946 | None:intergenic | 25.0% |
| ! | AATCAACAGTAAATTAGAGA+GGG | + | chr4.4:32786536-32786555 | None:intergenic | 25.0% |
| ! | AATGAACAATTATATAGCTC+AGG | - | chr4.4:32787743-32787762 | MS.gene065791:intron | 25.0% |
| ! | AATTGAACAACAATTTCTAC+TGG | + | chr4.4:32787857-32787876 | None:intergenic | 25.0% |
| ! | AGAGAGTAAACATAAATAAG+TGG | + | chr4.4:32788631-32788650 | None:intergenic | 25.0% |
| ! | ATAACATAGACCCATAAAAT+AGG | + | chr4.4:32788150-32788169 | None:intergenic | 25.0% |
| ! | ATATTGAAGAACTAAAGGTT+TGG | - | chr4.4:32787371-32787390 | MS.gene065791:intron | 25.0% |
| ! | ATTACATGAACTTAAGTAGT+TGG | - | chr4.4:32787927-32787946 | MS.gene065791:intron | 25.0% |
| ! | ATTGTTCATTTCGTTGAATA+AGG | + | chr4.4:32787733-32787752 | None:intergenic | 25.0% |
| ! | CTTTATGATACCACAAAATT+AGG | + | chr4.4:32788474-32788493 | None:intergenic | 25.0% |
| ! | GATAAATCACAACATGAAAT+GGG | + | chr4.4:32786959-32786978 | None:intergenic | 25.0% |
| ! | GGTATTAAATCAATTAGAGT+GGG | + | chr4.4:32787570-32787589 | None:intergenic | 25.0% |
| ! | GTAGAGAAAATTGTCAAAAA+TGG | + | chr4.4:32786497-32786516 | None:intergenic | 25.0% |
| ! | TAAACATTTGTGTAAAGGTT+TGG | - | chr4.4:32786191-32786210 | MS.gene065791:intron | 25.0% |
| ! | TAGTATATAGCAGTAACTTT+CGG | + | chr4.4:32788080-32788099 | None:intergenic | 25.0% |
| ! | TATTATTGCTACAAGTTTGT+AGG | - | chr4.4:32787698-32787717 | MS.gene065791:intron | 25.0% |
| ! | TGAAAAGGAAAATGATATAC+TGG | - | chr4.4:32785422-32785441 | MS.gene065791:intron | 25.0% |
| ! | TGACATAAACATTTGTGTAA+AGG | - | chr4.4:32786186-32786205 | MS.gene065791:intron | 25.0% |
| ! | TGATAAATCACAACATGAAA+TGG | + | chr4.4:32786960-32786979 | None:intergenic | 25.0% |
| !! | ATTTTATGGGTCTATGTTAT+GGG | - | chr4.4:32788150-32788169 | MS.gene065791:intron | 25.0% |
| !! | CAAATAAGTTGTTTCAAACA+AGG | + | chr4.4:32786160-32786179 | None:intergenic | 25.0% |
| !! | CACTCTAATTGATTTAATAC+CGG | - | chr4.4:32787569-32787588 | MS.gene065791:intron | 25.0% |
| !! | TATTTTATGGGTCTATGTTA+TGG | - | chr4.4:32788149-32788168 | MS.gene065791:intron | 25.0% |
| !! | TGTATCTTTACCTTTTATTC+TGG | - | chr4.4:32787784-32787803 | MS.gene065791:intron | 25.0% |
| !!! | AATAAAAAGGTTTTGAATCG+TGG | + | chr4.4:32785876-32785895 | None:intergenic | 25.0% |
| !!! | AGACTTTATATTTTAGAACG+TGG | + | chr4.4:32786717-32786736 | None:intergenic | 25.0% |
| !!! | ATGCGTTCAATTTTGATTTA+GGG | - | chr4.4:32785372-32785391 | MS.gene065791:intron | 25.0% |
| !!! | ATTTTCAAGTAGATAAGTCT+TGG | - | chr4.4:32788552-32788571 | MS.gene065791:intron | 25.0% |
| !!! | GACAGAGATTTATTTTATTC+AGG | - | chr4.4:32786471-32786490 | MS.gene065791:intron | 25.0% |
| !!! | TGACAATTTTCTCTACTTTT+TGG | - | chr4.4:32786501-32786520 | MS.gene065791:intron | 25.0% |
| !!! | TTTTCAAGTAGATAAGTCTT+GGG | - | chr4.4:32788553-32788572 | MS.gene065791:intron | 25.0% |
| AACATAGTGAACAAACGTTA+TGG | - | chr4.4:32785534-32785553 | MS.gene065791:CDS | 30.0% | |
| AACCTTTCATACTAAATTGC+CGG | + | chr4.4:32786058-32786077 | None:intergenic | 30.0% | |
| AAGATAAGAAAACCTGATCA+GGG | + | chr4.4:32787128-32787147 | None:intergenic | 30.0% | |
| AATCAAATATCAGCACCAAT+AGG | + | chr4.4:32788270-32788289 | None:intergenic | 30.0% | |
| ACCTTGAATAAATGTACCAT+TGG | + | chr4.4:32785473-32785492 | None:intergenic | 30.0% | |
| AGCTAAACCAAACATGAAAT+TGG | + | chr4.4:32785310-32785329 | None:intergenic | 30.0% | |
| AGGAAGTCTAAACATTAAGA+CGG | + | chr4.4:32788454-32788473 | None:intergenic | 30.0% | |
| AGTTACTGCTATATACTAGA+TGG | - | chr4.4:32788082-32788101 | MS.gene065791:intron | 30.0% | |
| ATCAACAGTAAATTAGAGAG+GGG | + | chr4.4:32786535-32786554 | None:intergenic | 30.0% | |
| CAAACAAATGCCCAAAAAAA+GGG | + | chr4.4:32788046-32788065 | None:intergenic | 30.0% | |
| CAATGTTACACACAATATTG+CGG | - | chr4.4:32788735-32788754 | MS.gene065791:CDS | 30.0% | |
| CAGTTTCAAACATGTTAGTT+AGG | - | chr4.4:32788812-32788831 | MS.gene065791:CDS | 30.0% | |
| CGGTATTAAATCAATTAGAG+TGG | + | chr4.4:32787571-32787590 | None:intergenic | 30.0% | |
| GAGTGATATTGAAGAACTAA+AGG | - | chr4.4:32787366-32787385 | MS.gene065791:intron | 30.0% | |
| GGCTATGAATATTATTTCCA+AGG | - | chr4.4:32787300-32787319 | MS.gene065791:CDS | 30.0% | |
| GTCTATGTTATGGGTTTATA+CGG | - | chr4.4:32788159-32788178 | MS.gene065791:intron | 30.0% | |
| TATACCTGAACCAGAATAAA+AGG | + | chr4.4:32787797-32787816 | None:intergenic | 30.0% | |
| TCCAATGGTACATTTATTCA+AGG | - | chr4.4:32785469-32785488 | MS.gene065791:intron | 30.0% | |
| TCTAAAAAATGGTCCGTTAT+AGG | - | chr4.4:32785492-32785511 | MS.gene065791:intron | 30.0% | |
| TTGTTCTATACCAATTACCA+TGG | + | chr4.4:32785566-32785585 | None:intergenic | 30.0% | |
| ! | ATTGTTGTTCAATTATGCCT+TGG | - | chr4.4:32787863-32787882 | MS.gene065791:CDS | 30.0% |
| ! | ATTTCATGTTTGGTTTAGCT+TGG | - | chr4.4:32785310-32785329 | MS.gene065791:intron | 30.0% |
| ! | CAGATAAATTTTCCAACACA+GGG | + | chr4.4:32788608-32788627 | None:intergenic | 30.0% |
| ! | CTTTTAACGTGGTAAAAAAC+TGG | + | chr4.4:32786630-32786649 | None:intergenic | 30.0% |
| ! | GCAATGAATTTTTCATAGAC+TGG | + | chr4.4:32785726-32785745 | None:intergenic | 30.0% |
| ! | GTTTAGACTTCCTAATTTTG+TGG | - | chr4.4:32788461-32788480 | MS.gene065791:intron | 30.0% |
| ! | GTTTTGTCAATGATTAAGCA+CGG | - | chr4.4:32786856-32786875 | MS.gene065791:intron | 30.0% |
| ! | TAATTATTAGCCTCAGAAAC+TGG | - | chr4.4:32786907-32786926 | MS.gene065791:intron | 30.0% |
| ! | TTTCATGTTTGGTTTAGCTT+GGG | - | chr4.4:32785311-32785330 | MS.gene065791:intron | 30.0% |
| !! | GTTATGATGTGATTAGCTTT+AGG | - | chr4.4:32788420-32788439 | MS.gene065791:intron | 30.0% |
| !!! | CAATTTTCTCTACTTTTTGG+TGG | - | chr4.4:32786504-32786523 | MS.gene065791:intron | 30.0% |
| !!! | CATGCGTTCAATTTTGATTT+AGG | - | chr4.4:32785371-32785390 | MS.gene065791:intron | 30.0% |
| !!! | TTTACCTTTTATTCTGGTTC+AGG | - | chr4.4:32787790-32787809 | MS.gene065791:intron | 30.0% |
| AACTCAGATAATGACAAGCA+AGG | + | chr4.4:32788403-32788422 | None:intergenic | 35.0% | |
| AATCACAACATGAAATGGGT+AGG | + | chr4.4:32786955-32786974 | None:intergenic | 35.0% | |
| ACTCTTGCCTTTAATATTCC+AGG | + | chr4.4:32788859-32788878 | None:intergenic | 35.0% | |
| AGAGTTTATGCATAAGCTCT+TGG | - | chr4.4:32786322-32786341 | MS.gene065791:intron | 35.0% | |
| AGATAAGAAAACCTGATCAG+GGG | + | chr4.4:32787127-32787146 | None:intergenic | 35.0% | |
| AGGAAGAACAACTTACAATG+AGG | - | chr4.4:32786586-32786605 | MS.gene065791:CDS | 35.0% | |
| ATGAACTTAAGTAGTTGGCT+TGG | - | chr4.4:32787932-32787951 | MS.gene065791:intron | 35.0% | |
| ATTAAATAGACACAGCGTCT+TGG | - | chr4.4:32787479-32787498 | MS.gene065791:intron | 35.0% | |
| ATTGGAAGTAATGTATAGCC+AGG | + | chr4.4:32785455-32785474 | None:intergenic | 35.0% | |
| CAATTATGTTCTCAAGGCAA+TGG | - | chr4.4:32788681-32788700 | MS.gene065791:CDS | 35.0% | |
| CCAAACAAATGCCCAAAAAA+AGG | + | chr4.4:32788047-32788066 | None:intergenic | 35.0% | |
| CGCTAAGAATTTCATGACTT+TGG | + | chr4.4:32785850-32785869 | None:intergenic | 35.0% | |
| CGCTATAGCATTTATTGAGT+TGG | + | chr4.4:32786688-32786707 | None:intergenic | 35.0% | |
| CTCAATCATGGATAGCAAAT+CGG | - | chr4.4:32786657-32786676 | MS.gene065791:intron | 35.0% | |
| CTCTTGCCTTTAATATTCCA+GGG | + | chr4.4:32788858-32788877 | None:intergenic | 35.0% | |
| CTGGACAAAATGACCAAAAA+AGG | + | chr4.4:32787838-32787857 | None:intergenic | 35.0% | |
| GAAAATAGATCTTATCCAGC+TGG | - | chr4.4:32787994-32788013 | MS.gene065791:intron | 35.0% | |
| GAAACTAGTGTATCCTATTG+TGG | - | chr4.4:32788505-32788524 | MS.gene065791:intron | 35.0% | |
| GAACAACTTACAATGAGGTT+AGG | - | chr4.4:32786591-32786610 | MS.gene065791:CDS | 35.0% | |
| GAAGATAAGAAAACCTGATC+AGG | + | chr4.4:32787129-32787148 | None:intergenic | 35.0% | |
| GAATAATATGCTCATCCTGT+TGG | - | chr4.4:32788228-32788247 | MS.gene065791:intron | 35.0% | |
| GTACTGCATAAACATTGAGT+GGG | + | chr4.4:32785984-32786003 | None:intergenic | 35.0% | |
| GTATCAGACACTACCTATAA+CGG | + | chr4.4:32785508-32785527 | None:intergenic | 35.0% | |
| GTTATAGGTAGTGTCTGATA+CGG | - | chr4.4:32785507-32785526 | MS.gene065791:intron | 35.0% | |
| TAGTTAATTCACTAACCAGC+TGG | + | chr4.4:32788012-32788031 | None:intergenic | 35.0% | |
| TGACGACAATTATGTTCTCA+AGG | - | chr4.4:32788675-32788694 | MS.gene065791:intron | 35.0% | |
| TGGCTATACATTACTTCCAA+TGG | - | chr4.4:32785454-32785473 | MS.gene065791:intron | 35.0% | |
| TGTGAGAAGGTAGAAAGTAA+AGG | - | chr4.4:32786566-32786585 | MS.gene065791:CDS | 35.0% | |
| TTAAATAGACACAGCGTCTT+GGG | - | chr4.4:32787480-32787499 | MS.gene065791:intron | 35.0% | |
| TTAAATCAATTAGAGTGGGC+TGG | + | chr4.4:32787566-32787585 | None:intergenic | 35.0% | |
| TTAGATCAGAACATCACTGA+AGG | + | chr4.4:32787441-32787460 | None:intergenic | 35.0% | |
| TTCTTCAATATCACTCAGAC+TGG | + | chr4.4:32787362-32787381 | None:intergenic | 35.0% | |
| TTTCATGACTTTGGCTGTTA+CGG | + | chr4.4:32785841-32785860 | None:intergenic | 35.0% | |
| ! | AAAAGCACAGTTCTCAATCA+TGG | - | chr4.4:32786645-32786664 | MS.gene065791:intron | 35.0% |
| ! | AACATGTTTGAAACTGACTG+AGG | + | chr4.4:32788808-32788827 | None:intergenic | 35.0% |
| ! | AATCTAGAAAGTGCAGAGAT+TGG | + | chr4.4:32785241-32785260 | None:intergenic | 35.0% |
| ! | ACTCTGGTTGCCTATTTTAT+GGG | - | chr4.4:32788137-32788156 | MS.gene065791:intron | 35.0% |
| ! | ATACACTAGTTTCCACTTTC+CGG | + | chr4.4:32788498-32788517 | None:intergenic | 35.0% |
| ! | GAATTTTCTGATCCAAGCAA+TGG | - | chr4.4:32787093-32787112 | MS.gene065791:intron | 35.0% |
| ! | GCAGATAAATTTTCCAACAC+AGG | + | chr4.4:32788609-32788628 | None:intergenic | 35.0% |
| ! | TACTCTGGTTGCCTATTTTA+TGG | - | chr4.4:32788136-32788155 | MS.gene065791:intron | 35.0% |
| ! | TCTGAGGCTAATAATTACCA+CGG | + | chr4.4:32786904-32786923 | None:intergenic | 35.0% |
| ! | TGATGCTCTGAATGTTCTTA+TGG | - | chr4.4:32787279-32787298 | MS.gene065791:intron | 35.0% |
| ! | TTGTTTAGTTCAGCTTACTC+TGG | - | chr4.4:32788121-32788140 | MS.gene065791:intron | 35.0% |
| ! | TTTTGTGGTATCATAAAGCC+CGG | - | chr4.4:32788476-32788495 | MS.gene065791:intron | 35.0% |
| !!! | ATCTCAGTATCTGCCTTTTT+TGG | - | chr4.4:32787822-32787841 | MS.gene065791:intron | 35.0% |
| !!! | ATTAAGCACGGTGGTTTTTT+GGG | - | chr4.4:32786868-32786887 | MS.gene065791:intron | 35.0% |
| !!! | CCTTTTTTTGGGCATTTGTT+TGG | - | chr4.4:32788044-32788063 | MS.gene065791:intron | 35.0% |
| AAAGGCAGATACTGAGATGA+TGG | + | chr4.4:32787820-32787839 | None:intergenic | 40.0% | |
| AATTGTGAAACTTGCAGCAG+TGG | - | chr4.4:32786433-32786452 | MS.gene065791:intron | 40.0% | |
| ACTCAGCATTCAGCATACTA+AGG | + | chr4.4:32786402-32786421 | None:intergenic | 40.0% | |
| AGGATAAGTGCAACTTTGCA+AGG | + | chr4.4:32786140-32786159 | None:intergenic | 40.0% | |
| ATAAGTCTTGGGAGCTAGTT+AGG | - | chr4.4:32788564-32788583 | MS.gene065791:intron | 40.0% | |
| ATGAGAAAAACATCCGTCGA+AGG | - | chr4.4:32787251-32787270 | MS.gene065791:intron | 40.0% | |
| CTCAGCATTCAGCATACTAA+GGG | + | chr4.4:32786401-32786420 | None:intergenic | 40.0% | |
| CTCCGGCAATTTAGTATGAA+AGG | - | chr4.4:32786053-32786072 | MS.gene065791:intron | 40.0% | |
| GGCTTAGGAGTAGAATTGAA+AGG | - | chr4.4:32787501-32787520 | MS.gene065791:intron | 40.0% | |
| GGTACTGCATAAACATTGAG+TGG | + | chr4.4:32785985-32786004 | None:intergenic | 40.0% | |
| GTACCAAGAAGAAAAAGCGA+CGG | - | chr4.4:32786000-32786019 | MS.gene065791:intron | 40.0% | |
| GTGAACAAACGTTATGGAAG+CGG | - | chr4.4:32785540-32785559 | MS.gene065791:CDS | 40.0% | |
| GTTACACACAATATTGCGGA+TGG | - | chr4.4:32788739-32788758 | MS.gene065791:CDS | 40.0% | |
| TAAGTCTTGGGAGCTAGTTA+GGG | - | chr4.4:32788565-32788584 | MS.gene065791:intron | 40.0% | |
| TACCAAGAAGAAAAAGCGAC+GGG | - | chr4.4:32786001-32786020 | MS.gene065791:intron | 40.0% | |
| TCAGCATTCAGCATACTAAG+GGG | + | chr4.4:32786400-32786419 | None:intergenic | 40.0% | |
| TCCACTCCCTGGAATATTAA+AGG | - | chr4.4:32788849-32788868 | MS.gene065791:CDS | 40.0% | |
| TCCTATTGTGGTCAAACACT+CGG | - | chr4.4:32788517-32788536 | MS.gene065791:intron | 40.0% | |
| TGAGAAAAACATCCGTCGAA+GGG | - | chr4.4:32787252-32787271 | MS.gene065791:intron | 40.0% | |
| TGATATACTGGACTTGAACC+TGG | - | chr4.4:32785434-32785453 | MS.gene065791:intron | 40.0% | |
| TGCTTCGATAAGCTATTGTG+AGG | + | chr4.4:32786254-32786273 | None:intergenic | 40.0% | |
| TGTGTAACATTGTCACTCTG+TGG | + | chr4.4:32788727-32788746 | None:intergenic | 40.0% | |
| TTAATACCGGAATGCTAACC+TGG | - | chr4.4:32787582-32787601 | MS.gene065791:intron | 40.0% | |
| TTGTCAATGATTAAGCACGG+TGG | - | chr4.4:32786859-32786878 | MS.gene065791:intron | 40.0% | |
| TTTAATATTCCAGGGAGTGG+AGG | + | chr4.4:32788850-32788869 | None:intergenic | 40.0% | |
| ! | ATTTTCTGCAGTGTGTGAGA+AGG | - | chr4.4:32786553-32786572 | MS.gene065791:CDS | 40.0% |
| ! | TACACTAGTTTCCACTTTCC+GGG | + | chr4.4:32788497-32788516 | None:intergenic | 40.0% |
| ! | TGAGAACTGTGCTTTTAACG+TGG | + | chr4.4:32786641-32786660 | None:intergenic | 40.0% |
| ! | TTTTCTGATCCAAGCAATGG+TGG | - | chr4.4:32787096-32787115 | MS.gene065791:intron | 40.0% |
| !! | ACTTTCTAAGATCCATGACC+AGG | + | chr4.4:32788191-32788210 | None:intergenic | 40.0% |
| !! | GTTCTCAAGGCAATGGATTT+TGG | - | chr4.4:32788688-32788707 | MS.gene065791:CDS | 40.0% |
| !! | TCAAGGCAATGGATTTTGGT+GGG | - | chr4.4:32788692-32788711 | MS.gene065791:CDS | 40.0% |
| !! | TTTAGCTTGGGATGAGATTC+TGG | - | chr4.4:32785323-32785342 | MS.gene065791:intron | 40.0% |
| !!! | GATTAAGCACGGTGGTTTTT+TGG | - | chr4.4:32786867-32786886 | MS.gene065791:intron | 40.0% |
| AAGTCCACTACCAGTTTCTG+AGG | + | chr4.4:32786920-32786939 | None:intergenic | 45.0% | |
| ACAACATGAAATGGGTAGGC+AGG | + | chr4.4:32786951-32786970 | None:intergenic | 45.0% | |
| ACACAATATTGCGGATGGAG+GGG | - | chr4.4:32788744-32788763 | MS.gene065791:CDS | 45.0% | |
| ACACACAATATTGCGGATGG+AGG | - | chr4.4:32788742-32788761 | MS.gene065791:CDS | 45.0% | |
| AGCAATCCAGGTTAGCATTC+CGG | + | chr4.4:32787591-32787610 | None:intergenic | 45.0% | |
| AGGTAAAGATACACCTCCAC+TGG | + | chr4.4:32787777-32787796 | None:intergenic | 45.0% | |
| ATAAGAATGGAAGAGGGCTC+CGG | - | chr4.4:32786036-32786055 | MS.gene065791:intron | 45.0% | |
| ATACGGAGAATTCCTGGTCA+TGG | - | chr4.4:32788176-32788195 | MS.gene065791:intron | 45.0% | |
| ATAGGTGGCAGATGAACTTG+TGG | - | chr4.4:32787068-32787087 | MS.gene065791:intron | 45.0% | |
| ATATCACTCAGACTGGTACG+AGG | + | chr4.4:32787355-32787374 | None:intergenic | 45.0% | |
| CACACAATATTGCGGATGGA+GGG | - | chr4.4:32788743-32788762 | MS.gene065791:CDS | 45.0% | |
| CTGTTACGGATGTTGCGTTA+TGG | + | chr4.4:32785827-32785846 | None:intergenic | 45.0% | |
| GAAGAGGACGAGGAATTGAT+GGG | - | chr4.4:32785037-32785056 | MS.gene065791:CDS | 45.0% | |
| GCCTTTAATATTCCAGGGAG+TGG | + | chr4.4:32788853-32788872 | None:intergenic | 45.0% | |
| GGGGTGATAAGAATGGAAGA+GGG | - | chr4.4:32786030-32786049 | MS.gene065791:intron | 45.0% | |
| GGGTTTATACGGAGAATTCC+TGG | - | chr4.4:32788170-32788189 | MS.gene065791:intron | 45.0% | |
| GGTAAAGATACACCTCCACT+GGG | + | chr4.4:32787776-32787795 | None:intergenic | 45.0% | |
| GTATCATAAAGCCCGGAAAG+TGG | - | chr4.4:32788483-32788502 | MS.gene065791:intron | 45.0% | |
| GTCAGGCATGTATCAATCAC+AGG | - | chr4.4:32788780-32788799 | MS.gene065791:CDS | 45.0% | |
| TCCGAGTGTTTGACCACAAT+AGG | + | chr4.4:32788521-32788540 | None:intergenic | 45.0% | |
| TTAGCCTCAGAAACTGGTAG+TGG | - | chr4.4:32786913-32786932 | MS.gene065791:intron | 45.0% | |
| TTTGAGAGCAGCGTTATCAC+CGG | + | chr4.4:32785155-32785174 | None:intergenic | 45.0% | |
| ! | CTGTATCTTTTCTCTCTGCG+TGG | - | chr4.4:32787404-32787423 | MS.gene065791:intron | 45.0% |
| ! | GGATGTTGCGTTATGGATTG+TGG | + | chr4.4:32785820-32785839 | None:intergenic | 45.0% |
| ! | GTTATGGATTGTGGTCGTTG+CGG | + | chr4.4:32785811-32785830 | None:intergenic | 45.0% |
| !! | AAGGCAATGGATTTTGGTGG+GGG | - | chr4.4:32788694-32788713 | MS.gene065791:CDS | 45.0% |
| !! | CAAGGCAATGGATTTTGGTG+GGG | - | chr4.4:32788693-32788712 | MS.gene065791:CDS | 45.0% |
| !! | CTCAAGGCAATGGATTTTGG+TGG | - | chr4.4:32788691-32788710 | MS.gene065791:CDS | 45.0% |
| !!! | TTTTGGGATCAAGTTGTCCG+TGG | - | chr4.4:32786884-32786903 | MS.gene065791:intron | 45.0% |
| !! | AAAAAAAAATATAAGTAATA+CGG | + | chr4.4:32786988-32787007 | None:intergenic | 5.0% |
| !!! | TTTAATCAAATTTATATTTT+TGG | + | chr4.4:32787465-32787484 | None:intergenic | 5.0% |
| AAACGTTATGGAAGCGGCCA+TGG | - | chr4.4:32785546-32785565 | MS.gene065791:CDS | 50.0% | |
| AAAGATACACCTCCACTGGG+AGG | + | chr4.4:32787773-32787792 | None:intergenic | 50.0% | |
| AAGGAAAGCAGCCTATCTGC+AGG | - | chr4.4:32787520-32787539 | MS.gene065791:intron | 50.0% | |
| AATATTGCGGATGGAGGGGA+AGG | - | chr4.4:32788748-32788767 | MS.gene065791:CDS | 50.0% | |
| ATGGAAGCGGCCATGGTAAT+TGG | - | chr4.4:32785553-32785572 | MS.gene065791:CDS | 50.0% | |
| CGAAGAGGACGAGGAATTGA+TGG | - | chr4.4:32785036-32785055 | MS.gene065791:CDS | 50.0% | |
| GAGCATCATAGACCCTTCGA+CGG | + | chr4.4:32787267-32787286 | None:intergenic | 50.0% | |
| GCTGTTGGGGGTGATAAGAA+TGG | - | chr4.4:32786023-32786042 | MS.gene065791:intron | 50.0% | |
| GGGGGTGATAAGAATGGAAG+AGG | - | chr4.4:32786029-32786048 | MS.gene065791:intron | 50.0% | |
| GGTTGTGGAACTACGCTTTC+CGG | - | chr4.4:32785058-32785077 | MS.gene065791:CDS | 50.0% | |
| TCCACTTCCACAGTTGCATG+AGG | + | chr4.4:32788323-32788342 | None:intergenic | 50.0% | |
| TCCTCATGCAACTGTGGAAG+TGG | - | chr4.4:32788319-32788338 | MS.gene065791:intron | 50.0% | |
| TGCTGTGATGTGGCTCCTAT+TGG | - | chr4.4:32788252-32788271 | MS.gene065791:intron | 50.0% | |
| TTGTCGTCATGCAGCTCGAA+AGG | + | chr4.4:32788664-32788683 | None:intergenic | 50.0% | |
| ! | ATGATGACGATGCTGCTTCC+AGG | - | chr4.4:32785194-32785213 | MS.gene065791:CDS | 50.0% |
| ! | TGGTGCTTTTGTCCCTGTGT+TGG | - | chr4.4:32788593-32788612 | MS.gene065791:intron | 50.0% |
| !! | AAGAAAAAGCGACGGGCTGT+TGG | - | chr4.4:32786008-32786027 | MS.gene065791:intron | 50.0% |
| !! | AGAAAAAGCGACGGGCTGTT+GGG | - | chr4.4:32786009-32786028 | MS.gene065791:intron | 50.0% |
| !! | GACGAGGAATTGATGGGTTG+TGG | - | chr4.4:32785043-32785062 | MS.gene065791:CDS | 50.0% |
| !!! | AGCCCGTCGCTTTTTCTTCT+TGG | + | chr4.4:32786006-32786025 | None:intergenic | 50.0% |
| ACTACGCTTTCCGGCCAATC+AGG | - | chr4.4:32785067-32785086 | MS.gene065791:CDS | 55.0% | |
| AGACACAGCGTCTTGGGCTT+AGG | - | chr4.4:32787486-32787505 | MS.gene065791:intron | 55.0% | |
| AGACTCACGCAACTACTGCC+TGG | + | chr4.4:32785215-32785234 | None:intergenic | 55.0% | |
| AGCTCAGGAAATCCTCCCAG+TGG | - | chr4.4:32787758-32787777 | MS.gene065791:intron | 55.0% | |
| CATGAAATGGGTAGGCAGGC+AGG | + | chr4.4:32786947-32786966 | None:intergenic | 55.0% | |
| CTGCTCAAGCTCCTGCAGAT+AGG | + | chr4.4:32787534-32787553 | None:intergenic | 55.0% | |
| GACACGTCCTCATGCAACTG+TGG | - | chr4.4:32788313-32788332 | MS.gene065791:intron | 55.0% | |
| GGGGACAAACCACCATTGCT+TGG | + | chr4.4:32787108-32787127 | None:intergenic | 55.0% | |
| GTCTTGGGAGCTAGTTAGGG+TGG | - | chr4.4:32788568-32788587 | MS.gene065791:intron | 55.0% | |
| TCAATCGTCCGTGGACGAAG+AGG | - | chr4.4:32785021-32785040 | MS.gene065791:CDS | 55.0% | |
| TCAGGAAATCCTCCCAGTGG+AGG | - | chr4.4:32787761-32787780 | MS.gene065791:intron | 55.0% | |
| TCGTCCACGGACGATTGATG+CGG | + | chr4.4:32785019-32785038 | None:intergenic | 55.0% | |
| TTCCTCGTCCTCTTCGTCCA+CGG | + | chr4.4:32785032-32785051 | None:intergenic | 55.0% | |
| ! | GGGGAAGGTTCTAGCATGTC+AGG | - | chr4.4:32788763-32788782 | MS.gene065791:CDS | 55.0% |
| ! | TCCTGCTGGTTGAGCCTGAT+TGG | + | chr4.4:32785084-32785103 | None:intergenic | 55.0% |
| ! | TCCTGTTGGCTGCTGTGATG+TGG | - | chr4.4:32788242-32788261 | MS.gene065791:intron | 55.0% |
| ! | TGGTGGTTTGTCCCCTGATC+AGG | - | chr4.4:32787113-32787132 | MS.gene065791:intron | 55.0% |
| !! | AAAAAGCGACGGGCTGTTGG+GGG | - | chr4.4:32786011-32786030 | MS.gene065791:intron | 55.0% |
| !! | GAAAAAGCGACGGGCTGTTG+GGG | - | chr4.4:32786010-32786029 | MS.gene065791:intron | 55.0% |
| ACTCCGGCTAGACGGTAACC+CGG | + | chr4.4:32785110-32785129 | None:intergenic | 60.0% | |
| CCAGGGAGTGGAGGTGATGT+CGG | + | chr4.4:32788841-32788860 | None:intergenic | 60.0% | |
| GAGAGCAGCGTTATCACCGG+CGG | + | chr4.4:32785152-32785171 | None:intergenic | 60.0% | |
| GCCAATCAGGCTCAACCAGC+AGG | - | chr4.4:32785080-32785099 | MS.gene065791:CDS | 60.0% | |
| GCCACATCACAGCAGCCAAC+AGG | + | chr4.4:32788246-32788265 | None:intergenic | 60.0% | |
| GCTGGTTGAGCCTGATTGGC+CGG | + | chr4.4:32785080-32785099 | None:intergenic | 60.0% | |
| GGGAGCTAGTTAGGGTGGTG+TGG | - | chr4.4:32788573-32788592 | MS.gene065791:intron | 60.0% | |
| GTCTGCTCACTCCGGCTAGA+CGG | + | chr4.4:32785118-32785137 | None:intergenic | 60.0% | |
| TAGCCGGAGTGAGCAGACCA+CGG | - | chr4.4:32785120-32785139 | MS.gene065791:CDS | 60.0% | |
| AGCCGGAGTGAGCAGACCAC+GGG | - | chr4.4:32785121-32785140 | MS.gene065791:CDS | 65.0% | |
| CCGACATCACCTCCACTCCC+TGG | - | chr4.4:32788838-32788857 | MS.gene065791:CDS | 65.0% | |
| GCAGCCGCATCAATCGTCCG+TGG | - | chr4.4:32785012-32785031 | MS.gene065791:CDS | 65.0% | |
| GGGAGTGGAGGTGATGTCGG+AGG | + | chr4.4:32788838-32788857 | None:intergenic | 65.0% | |
| GTCCGTGGACGAAGAGGACG+AGG | - | chr4.4:32785027-32785046 | MS.gene065791:CDS | 65.0% | |
| GTGCCGGGTTACCGTCTAGC+CGG | - | chr4.4:32785104-32785123 | MS.gene065791:CDS | 65.0% | |
| TCCCCGTGGTCTGCTCACTC+CGG | + | chr4.4:32785126-32785145 | None:intergenic | 65.0% | |
| ! | GGCTCAACCAGCAGGAGTGC+CGG | - | chr4.4:32785088-32785107 | MS.gene065791:CDS | 65.0% |
| !! | GCTCAACCAGCAGGAGTGCC+GGG | - | chr4.4:32785089-32785108 | MS.gene065791:CDS | 65.0% |
| CGGTAACCCGGCACTCCTGC+TGG | + | chr4.4:32785098-32785117 | None:intergenic | 70.0% | |
| GCCGGAGTGAGCAGACCACG+GGG | - | chr4.4:32785122-32785141 | MS.gene065791:CDS | 70.0% | |
| ATCACCGGCGGCTGTCCCCG+TGG | + | chr4.4:32785140-32785159 | None:intergenic | 75.0% | |
| CAGACCACGGGGACAGCCGC+CGG | - | chr4.4:32785133-32785152 | MS.gene065791:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 32785003 | 32788894 | 32785003 | ID=MS.gene065791 |
| chr4.4 | mRNA | 32785003 | 32788894 | 32785003 | ID=MS.gene065791.t1;Parent=MS.gene065791 |
| chr4.4 | exon | 32788679 | 32788894 | 32788679 | ID=MS.gene065791.t1.exon1;Parent=MS.gene065791.t1 |
| chr4.4 | CDS | 32788679 | 32788894 | 32788679 | ID=cds.MS.gene065791.t1;Parent=MS.gene065791.t1 |
| chr4.4 | exon | 32787823 | 32787896 | 32787823 | ID=MS.gene065791.t1.exon2;Parent=MS.gene065791.t1 |
| chr4.4 | CDS | 32787823 | 32787896 | 32787823 | ID=cds.MS.gene065791.t1;Parent=MS.gene065791.t1 |
| chr4.4 | exon | 32787290 | 32787333 | 32787290 | ID=MS.gene065791.t1.exon3;Parent=MS.gene065791.t1 |
| chr4.4 | CDS | 32787290 | 32787333 | 32787290 | ID=cds.MS.gene065791.t1;Parent=MS.gene065791.t1 |
| chr4.4 | exon | 32786763 | 32786825 | 32786763 | ID=MS.gene065791.t1.exon4;Parent=MS.gene065791.t1 |
| chr4.4 | CDS | 32786763 | 32786825 | 32786763 | ID=cds.MS.gene065791.t1;Parent=MS.gene065791.t1 |
| chr4.4 | exon | 32786510 | 32786656 | 32786510 | ID=MS.gene065791.t1.exon5;Parent=MS.gene065791.t1 |
| chr4.4 | CDS | 32786510 | 32786656 | 32786510 | ID=cds.MS.gene065791.t1;Parent=MS.gene065791.t1 |
| chr4.4 | exon | 32786341 | 32786409 | 32786341 | ID=MS.gene065791.t1.exon6;Parent=MS.gene065791.t1 |
| chr4.4 | CDS | 32786341 | 32786409 | 32786341 | ID=cds.MS.gene065791.t1;Parent=MS.gene065791.t1 |
| chr4.4 | exon | 32786086 | 32786184 | 32786086 | ID=MS.gene065791.t1.exon7;Parent=MS.gene065791.t1 |
| chr4.4 | CDS | 32786086 | 32786184 | 32786086 | ID=cds.MS.gene065791.t1;Parent=MS.gene065791.t1 |
| chr4.4 | exon | 32785513 | 32785583 | 32785513 | ID=MS.gene065791.t1.exon8;Parent=MS.gene065791.t1 |
| chr4.4 | CDS | 32785513 | 32785583 | 32785513 | ID=cds.MS.gene065791.t1;Parent=MS.gene065791.t1 |
| chr4.4 | exon | 32785003 | 32785240 | 32785003 | ID=MS.gene065791.t1.exon9;Parent=MS.gene065791.t1 |
| chr4.4 | CDS | 32785003 | 32785240 | 32785003 | ID=cds.MS.gene065791.t1;Parent=MS.gene065791.t1 |
| Gene Sequence |
| Protein sequence |
