Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067367.t1 | XP_013443470.1 | 96.8 | 347 | 10 | 1 | 12 | 358 | 1 | 346 | 2.20E-187 | 664.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067367.t1 | Q9SLN8 | 47.1 | 346 | 177 | 3 | 13 | 358 | 4 | 343 | 2.5e-91 | 337.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067367.t1 | A0A072TVD7 | 96.8 | 347 | 10 | 1 | 12 | 358 | 1 | 346 | 1.6e-187 | 664.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049149 | MS.gene067367 | 0.804406 | 2.19E-49 | -1.69E-46 |
| MS.gene049150 | MS.gene067367 | 0.806785 | 6.95E-50 | -1.69E-46 |
| MS.gene049153 | MS.gene067367 | 0.807302 | 5.40E-50 | -1.69E-46 |
| MS.gene04933 | MS.gene067367 | 0.803159 | 3.98E-49 | -1.69E-46 |
| MS.gene049758 | MS.gene067367 | 0.81244 | 4.23E-51 | -1.69E-46 |
| MS.gene050301 | MS.gene067367 | 0.803116 | 4.06E-49 | -1.69E-46 |
| MS.gene050558 | MS.gene067367 | 0.839914 | 1.19E-57 | -1.69E-46 |
| MS.gene050560 | MS.gene067367 | 0.81128 | 7.58E-51 | -1.69E-46 |
| MS.gene050787 | MS.gene067367 | 0.834322 | 3.21E-56 | -1.69E-46 |
| MS.gene051860 | MS.gene067367 | 0.860395 | 2.13E-63 | -1.69E-46 |
| MS.gene052011 | MS.gene067367 | -0.829906 | 3.96E-55 | -1.69E-46 |
| MS.gene052207 | MS.gene067367 | 0.832562 | 8.81E-56 | -1.69E-46 |
| MS.gene052253 | MS.gene067367 | 0.808508 | 2.99E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene067367 | 0.8325 | 9.13E-56 | -1.69E-46 |
| MS.gene054183 | MS.gene067367 | 0.830546 | 2.76E-55 | -1.69E-46 |
| MS.gene054473 | MS.gene067367 | 0.873902 | 1.03E-67 | -1.69E-46 |
| MS.gene054542 | MS.gene067367 | 0.809537 | 1.80E-50 | -1.69E-46 |
| MS.gene054983 | MS.gene067367 | 0.824024 | 1.01E-53 | -1.69E-46 |
| MS.gene055356 | MS.gene067367 | 0.811409 | 7.10E-51 | -1.69E-46 |
| MS.gene055358 | MS.gene067367 | 0.820771 | 5.75E-53 | -1.69E-46 |
| MS.gene057121 | MS.gene067367 | 0.81483 | 1.26E-51 | -1.69E-46 |
| MS.gene057469 | MS.gene067367 | 0.84525 | 4.57E-59 | -1.69E-46 |
| MS.gene057476 | MS.gene067367 | 0.822288 | 2.57E-53 | -1.69E-46 |
| MS.gene058002 | MS.gene067367 | 0.819545 | 1.10E-52 | -1.69E-46 |
| MS.gene05811 | MS.gene067367 | 0.839406 | 1.61E-57 | -1.69E-46 |
| MS.gene058736 | MS.gene067367 | 0.803666 | 3.13E-49 | -1.69E-46 |
| MS.gene058739 | MS.gene067367 | 0.814782 | 1.29E-51 | -1.69E-46 |
| MS.gene05907 | MS.gene067367 | 0.820487 | 6.69E-53 | -1.69E-46 |
| MS.gene059420 | MS.gene067367 | 0.819855 | 9.33E-53 | -1.69E-46 |
| MS.gene05984 | MS.gene067367 | 0.827 | 1.99E-54 | -1.69E-46 |
| MS.gene061114 | MS.gene067367 | -0.80898 | 2.37E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 62 sgRNAs with CRISPR-Local
Find 183 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTATGTTGTTGGCTGTGC+TGG | 0.188280 | 2.1:-36312550 | MS.gene067367:CDS |
| GCTATTGATGCTCTAGTTAT+TGG | 0.197686 | 2.1:-36313044 | MS.gene067367:CDS |
| CACTTCCATTTCACTTTGAT+TGG | 0.213484 | 2.1:+36314527 | None:intergenic |
| TATACAACATCCATCATATT+TGG | 0.217301 | 2.1:+36311862 | None:intergenic |
| CTTCAAAATGTGACTCCTTT+GGG | 0.232194 | 2.1:+36314463 | None:intergenic |
| ATTGGAAGAGTTGTGACTTC+TGG | 0.238593 | 2.1:-36313026 | MS.gene067367:CDS |
| ACTTATCATCTTGGAATTCT+TGG | 0.247958 | 2.1:-36312888 | MS.gene067367:intron |
| ATCTAAACTCCACTCTTAAA+AGG | 0.259045 | 2.1:-36312367 | MS.gene067367:CDS |
| AGTACCTGGCCTGGAGTTAA+TGG | 0.270568 | 2.1:+36314297 | None:intergenic |
| TGAGAAAGATGATTTGGTTA+TGG | 0.293811 | 2.1:-36312991 | MS.gene067367:CDS |
| GAGAAAGATGATTTGGTTAT+GGG | 0.296791 | 2.1:-36312990 | MS.gene067367:CDS |
| TTGATTGGTTGCTAACTCTT+TGG | 0.299019 | 2.1:+36314542 | None:intergenic |
| TTTAGTGGACTGTCAGCTTA+TGG | 0.321184 | 2.1:-36312679 | MS.gene067367:CDS |
| TGAAATTTGCAAACCACAAA+AGG | 0.339905 | 2.1:-36312647 | MS.gene067367:CDS |
| ACTTCAAAATGTGACTCCTT+TGG | 0.341261 | 2.1:+36314462 | None:intergenic |
| TAAGTTTGAGAAAGATGATT+TGG | 0.344609 | 2.1:-36312997 | MS.gene067367:CDS |
| CTTTATCACTATGTATTTGT+TGG | 0.353004 | 2.1:+36314503 | None:intergenic |
| AGCATCCCTTCTGCATTTGT+TGG | 0.353234 | 2.1:-36311706 | MS.gene067367:CDS |
| TTTCCACTCACTTATCATCT+TGG | 0.363774 | 2.1:-36312897 | MS.gene067367:CDS |
| TTGGAAGAGTTGTGACTTCT+GGG | 0.364560 | 2.1:-36313025 | MS.gene067367:CDS |
| GCATTTGTTGGACTCTTCAA+TGG | 0.366825 | 2.1:-36311694 | MS.gene067367:CDS |
| GTATTTGTTTCAGCAGCATC+TGG | 0.388705 | 2.1:-36312616 | MS.gene067367:CDS |
| TCTTCGCAATGGTCAGTTGC+AGG | 0.394420 | 2.1:-36311758 | MS.gene067367:CDS |
| GTTGCTAACATGAAAGCATT+TGG | 0.399078 | 2.1:-36311943 | MS.gene067367:CDS |
| GGTTTCTTCCTTGTAGTTGA+AGG | 0.426312 | 2.1:+36312391 | None:intergenic |
| AGCAACCAATCAAAGTGAAA+TGG | 0.440276 | 2.1:-36314532 | MS.gene067367:CDS |
| GGCTGAGTACAGTGTAGTTA+AGG | 0.443379 | 2.1:-36312955 | MS.gene067367:CDS |
| GCTATGTTGTTGGCTGTGCT+GGG | 0.443602 | 2.1:-36312549 | MS.gene067367:CDS |
| TTCATGCGGTTAATAAGATA+AGG | 0.447040 | 2.1:+36314360 | None:intergenic |
| GGATCAGTTGGAAATATTGT+AGG | 0.464203 | 2.1:-36312595 | MS.gene067367:CDS |
| TTTGGTAGAGTGTCTGTTTG+TGG | 0.484471 | 2.1:-36311925 | MS.gene067367:CDS |
| GTGATTGAAGACAGGTCGTT+GGG | 0.490083 | 2.1:-36311736 | MS.gene067367:CDS |
| TAATGGAGTTGCAAAGCTAA+TGG | 0.491094 | 2.1:+36314314 | None:intergenic |
| TTTAGTCTTTCGTTGAAGCC+AGG | 0.494169 | 2.1:-36314426 | MS.gene067367:CDS |
| CAAACCACAAAAGGGTGAAA+AGG | 0.495171 | 2.1:-36312638 | MS.gene067367:CDS |
| ATTTCTGAGTATACTGATGT+TGG | 0.495880 | 2.1:-36311898 | MS.gene067367:CDS |
| TGGTTATGGGAGTATTCACT+TGG | 0.497920 | 2.1:-36312977 | MS.gene067367:CDS |
| GAAATTTGCAAACCACAAAA+GGG | 0.506126 | 2.1:-36312646 | MS.gene067367:CDS |
| TTTGCAACTCCATTAACTCC+AGG | 0.512264 | 2.1:-36314306 | MS.gene067367:CDS |
| GAGAGCTTCACCAAATATGA+TGG | 0.514085 | 2.1:-36311872 | MS.gene067367:CDS |
| TCAGCAGCATCTGGATCAGT+TGG | 0.518867 | 2.1:-36312607 | MS.gene067367:CDS |
| CAAATGATGAGTACCTGGCC+TGG | 0.527096 | 2.1:+36314288 | None:intergenic |
| TGATGATGCCTTCAACTACA+AGG | 0.530215 | 2.1:-36312399 | MS.gene067367:CDS |
| TTTAAGAGTGGAGTTTAGAT+CGG | 0.530559 | 2.1:+36312370 | None:intergenic |
| TTCAAAATGTGACTCCTTTG+GGG | 0.537629 | 2.1:+36314464 | None:intergenic |
| ATTATCACTTCATCAGAACC+TGG | 0.540233 | 2.1:+36314408 | None:intergenic |
| ATATTTCAGGTACTTTCCGA+TGG | 0.548527 | 2.1:-36312015 | MS.gene067367:intron |
| AACTCCATTAACTCCAGGCC+AGG | 0.553286 | 2.1:-36314301 | MS.gene067367:intron |
| AAAATATATGTCAATTCCAT+CGG | 0.554701 | 2.1:+36311999 | None:intergenic |
| ATAAGTGAGTGGAAATTCAA+AGG | 0.566962 | 2.1:+36312905 | None:intergenic |
| AAGAGTCCAACAAATGCAGA+AGG | 0.573531 | 2.1:+36311700 | None:intergenic |
| AGTTGCAGGTGATTGAAGAC+AGG | 0.582175 | 2.1:-36311744 | MS.gene067367:CDS |
| ACATTACTCAAAGAAGAGCT+AGG | 0.588928 | 2.1:-36312425 | MS.gene067367:CDS |
| CTCTTCAATGGAGATAACGT+TGG | 0.603986 | 2.1:-36311682 | MS.gene067367:CDS |
| TACAAGAGAATCACTATCAG+AGG | 0.605599 | 2.1:-36311841 | MS.gene067367:CDS |
| GGTTATGGGAGTATTCACTT+GGG | 0.610812 | 2.1:-36312976 | MS.gene067367:CDS |
| GGTGATTGAAGACAGGTCGT+TGG | 0.611028 | 2.1:-36311737 | MS.gene067367:CDS |
| ACATTGGATTATCTTCGCAA+TGG | 0.613205 | 2.1:-36311769 | MS.gene067367:CDS |
| AGTGGACTGTCAGCTTATGG+AGG | 0.616255 | 2.1:-36312676 | MS.gene067367:CDS |
| ATTCCAAGATGATAAGTGAG+TGG | 0.641007 | 2.1:+36312894 | None:intergenic |
| AGAGTCCAACAAATGCAGAA+GGG | 0.673061 | 2.1:+36311701 | None:intergenic |
| TCGCATTGAAGATTCCCCAA+AGG | 0.693369 | 2.1:-36314478 | MS.gene067367:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAATAATAATTGAGT+TGG | - | chr2.1:36312695-36312714 | MS.gene067367:intron | 10.0% |
| !! | AAAATAATAATAATTGAGTT+GGG | - | chr2.1:36312696-36312715 | MS.gene067367:intron | 10.0% |
| !! | ATTTACAAAAATCATTAATT+AGG | + | chr2.1:36312984-36313003 | None:intergenic | 10.0% |
| !! | TTGAATAAAAATACAAAAAA+AGG | + | chr2.1:36312894-36312913 | None:intergenic | 10.0% |
| !!! | ACAATTTTATATATATTCTA+TGG | - | chr2.1:36313012-36313031 | MS.gene067367:CDS | 10.0% |
| !!! | ATATAAAAAGATACATTTTT+TGG | + | chr2.1:36312343-36312362 | None:intergenic | 10.0% |
| !!! | ATTTAAGTTAGAATTAAAAA+AGG | + | chr2.1:36312259-36312278 | None:intergenic | 10.0% |
| !!! | TATAAAAAGATACATTTTTT+GGG | + | chr2.1:36312342-36312361 | None:intergenic | 10.0% |
| !!! | TTGATTTATTTGTTAATAAT+TGG | - | chr2.1:36311972-36311991 | MS.gene067367:CDS | 10.0% |
| !! | AAACAAATAAAAATGAAAAC+AGG | + | chr2.1:36312077-36312096 | None:intergenic | 15.0% |
| !! | CTAAGATAAAAATAAATTCA+TGG | + | chr2.1:36313751-36313770 | None:intergenic | 15.0% |
| !!! | AAATAATAATAATTGAGTTG+GGG | - | chr2.1:36312697-36312716 | MS.gene067367:intron | 15.0% |
| !!! | ATATATATTCTATGGATTTT+TGG | - | chr2.1:36313020-36313039 | MS.gene067367:CDS | 15.0% |
| !!! | CATGAATTTATTTTTATCTT+AGG | - | chr2.1:36313749-36313768 | MS.gene067367:intron | 15.0% |
| !!! | TAATTTGTTTTGAATATTTC+AGG | - | chr2.1:36314171-36314190 | MS.gene067367:intron | 15.0% |
| !! | AAAATATATGTCAATTCCAT+CGG | + | chr2.1:36314203-36314222 | None:intergenic | 20.0% |
| !! | ACAAAAATCATTAATTAGGA+TGG | + | chr2.1:36312980-36312999 | None:intergenic | 20.0% |
| !! | ATAAAACAAATCAAACACTA+TGG | - | chr2.1:36312426-36312445 | MS.gene067367:CDS | 20.0% |
| !! | CCTATTTATAGAAGAATATT+GGG | - | chr2.1:36313886-36313905 | MS.gene067367:intron | 20.0% |
| !! | TAATGTAAAAAAGAACATGA+CGG | + | chr2.1:36312497-36312516 | None:intergenic | 20.0% |
| !! | TCCTATTTATAGAAGAATAT+TGG | - | chr2.1:36313885-36313904 | MS.gene067367:intron | 20.0% |
| !! | TTCAAAACAAATTACATCAA+AGG | + | chr2.1:36314165-36314184 | None:intergenic | 20.0% |
| !!! | TTTTTCTAACTCATAATCTT+GGG | + | chr2.1:36312576-36312595 | None:intergenic | 20.0% |
| ! | AAAAATACAAAAAAAGGCAG+CGG | + | chr2.1:36312888-36312907 | None:intergenic | 25.0% |
| ! | CCCAATATTCTTCTATAAAT+AGG | + | chr2.1:36313889-36313908 | None:intergenic | 25.0% |
| ! | CCTAATTATAAGAGAAAGTT+GGG | + | chr2.1:36313971-36313990 | None:intergenic | 25.0% |
| ! | CTTTATCACTATGTATTTGT+TGG | + | chr2.1:36311699-36311718 | None:intergenic | 25.0% |
| ! | GTACTCAAAATTCTTGATAT+AGG | - | chr2.1:36311938-36311957 | MS.gene067367:CDS | 25.0% |
| ! | TAAGTTTGAGAAAGATGATT+TGG | - | chr2.1:36313202-36313221 | MS.gene067367:intron | 25.0% |
| ! | TATACAACATCCATCATATT+TGG | + | chr2.1:36314340-36314359 | None:intergenic | 25.0% |
| ! | TCAACAAAAGTTTATGTATC+TGG | + | chr2.1:36313948-36313967 | None:intergenic | 25.0% |
| ! | TCCTAATTATAAGAGAAAGT+TGG | + | chr2.1:36313972-36313991 | None:intergenic | 25.0% |
| ! | TGCTTTAATTATTTACCATC+CGG | - | chr2.1:36312110-36312129 | MS.gene067367:intron | 25.0% |
| !! | AGATTTTTCTGCTAAAACAT+TGG | - | chr2.1:36314414-36314433 | MS.gene067367:CDS | 25.0% |
| !! | GCTGATTATATGAATGTTTT+TGG | - | chr2.1:36314391-36314410 | MS.gene067367:CDS | 25.0% |
| !! | GTTTTTCTAACTCATAATCT+TGG | + | chr2.1:36312577-36312596 | None:intergenic | 25.0% |
| !! | TTATAAGATATCCTTTTTGC+AGG | - | chr2.1:36313496-36313515 | MS.gene067367:intron | 25.0% |
| !!! | AAAAAAAGGTGAGCTTTATT+AGG | - | chr2.1:36313677-36313696 | MS.gene067367:intron | 25.0% |
| !!! | ACATATATTTTGACAATGTC+GGG | - | chr2.1:36314212-36314231 | MS.gene067367:intron | 25.0% |
| !!! | GACATATATTTTGACAATGT+CGG | - | chr2.1:36314211-36314230 | MS.gene067367:intron | 25.0% |
| !!! | TAATAAAGCTCACCTTTTTT+TGG | + | chr2.1:36313678-36313697 | None:intergenic | 25.0% |
| AAACCATACTAGATAACCAA+TGG | + | chr2.1:36313074-36313093 | None:intergenic | 30.0% | |
| AAATATTGCACCCTAGAAAA+GGG | + | chr2.1:36312942-36312961 | None:intergenic | 30.0% | |
| ACTTATCATCTTGGAATTCT+TGG | - | chr2.1:36313311-36313330 | MS.gene067367:intron | 30.0% | |
| ATAAGTGAGTGGAAATTCAA+AGG | + | chr2.1:36313297-36313316 | None:intergenic | 30.0% | |
| ATCTAAACTCCACTCTTAAA+AGG | - | chr2.1:36313832-36313851 | MS.gene067367:intron | 30.0% | |
| ATTTCTGAGTATACTGATGT+TGG | - | chr2.1:36314301-36314320 | MS.gene067367:intron | 30.0% | |
| CCCAACTTTCTCTTATAATT+AGG | - | chr2.1:36313968-36313987 | MS.gene067367:intron | 30.0% | |
| GAAATTTGCAAACCACAAAA+GGG | - | chr2.1:36313553-36313572 | MS.gene067367:intron | 30.0% | |
| GAAGAAAAATGTCTAGTGAA+TGG | - | chr2.1:36313400-36313419 | MS.gene067367:intron | 30.0% | |
| TAAATATTGCACCCTAGAAA+AGG | + | chr2.1:36312943-36312962 | None:intergenic | 30.0% | |
| TGAAATTTGCAAACCACAAA+AGG | - | chr2.1:36313552-36313571 | MS.gene067367:intron | 30.0% | |
| TTCATGCGGTTAATAAGATA+AGG | + | chr2.1:36311842-36311861 | None:intergenic | 30.0% | |
| TTGATATTACTGATGTGATG+TGG | - | chr2.1:36312164-36312183 | MS.gene067367:intron | 30.0% | |
| TTTAAGAGTGGAGTTTAGAT+CGG | + | chr2.1:36313832-36313851 | None:intergenic | 30.0% | |
| ! | GGACAATATGCAAAACTTTT+AGG | - | chr2.1:36313625-36313644 | MS.gene067367:intron | 30.0% |
| !! | GAGAAAGATGATTTGGTTAT+GGG | - | chr2.1:36313209-36313228 | MS.gene067367:intron | 30.0% |
| !! | TGAGAAAGATGATTTGGTTA+TGG | - | chr2.1:36313208-36313227 | MS.gene067367:intron | 30.0% |
| !! | TTCTTCTTGTTGTCCTATTT+TGG | - | chr2.1:36313121-36313140 | MS.gene067367:intron | 30.0% |
| !!! | ACATTTTGAAGTCAAAACTG+AGG | - | chr2.1:36311748-36311767 | MS.gene067367:CDS | 30.0% |
| !!! | ATATATTTTGACAATGTCGG+GGG | - | chr2.1:36314214-36314233 | MS.gene067367:intron | 30.0% |
| !!! | CATATATTTTGACAATGTCG+GGG | - | chr2.1:36314213-36314232 | MS.gene067367:intron | 30.0% |
| !!! | GTCTCAGGTTTCATTTTTTT+CGG | - | chr2.1:36312806-36312825 | MS.gene067367:intron | 30.0% |
| AATCAAACACTATGGTCTAG+TGG | - | chr2.1:36312434-36312453 | MS.gene067367:intron | 35.0% | |
| ACATTACTCAAAGAAGAGCT+AGG | - | chr2.1:36313774-36313793 | MS.gene067367:intron | 35.0% | |
| ACATTGGATTATCTTCGCAA+TGG | - | chr2.1:36314430-36314449 | MS.gene067367:CDS | 35.0% | |
| ACTTCAAAATGTGACTCCTT+TGG | + | chr2.1:36311740-36311759 | None:intergenic | 35.0% | |
| AGCAACCAATCAAAGTGAAA+TGG | - | chr2.1:36311667-36311686 | MS.gene067367:CDS | 35.0% | |
| AGCCAAAATCTTTGTACTCA+AGG | + | chr2.1:36313709-36313728 | None:intergenic | 35.0% | |
| ATTATCACTTCATCAGAACC+TGG | + | chr2.1:36311794-36311813 | None:intergenic | 35.0% | |
| ATTCCAAGATGATAAGTGAG+TGG | + | chr2.1:36313308-36313327 | None:intergenic | 35.0% | |
| CACTTCCATTTCACTTTGAT+TGG | + | chr2.1:36311675-36311694 | None:intergenic | 35.0% | |
| CTCTTATAATTAGGACCAGA+TGG | - | chr2.1:36313977-36313996 | MS.gene067367:intron | 35.0% | |
| CTTCAAAATGTGACTCCTTT+GGG | + | chr2.1:36311739-36311758 | None:intergenic | 35.0% | |
| CTTCTATAAATAGGACCAGA+GGG | + | chr2.1:36313880-36313899 | None:intergenic | 35.0% | |
| GCTATTGATGCTCTAGTTAT+TGG | - | chr2.1:36313155-36313174 | MS.gene067367:intron | 35.0% | |
| GGATCAGTTGGAAATATTGT+AGG | - | chr2.1:36313604-36313623 | MS.gene067367:intron | 35.0% | |
| GTGTCGAATATCTATGTATG+TGG | + | chr2.1:36314014-36314033 | None:intergenic | 35.0% | |
| TAATGGAGTTGCAAAGCTAA+TGG | + | chr2.1:36311888-36311907 | None:intergenic | 35.0% | |
| TACAAGAGAATCACTATCAG+AGG | - | chr2.1:36314358-36314377 | MS.gene067367:CDS | 35.0% | |
| TCTTCTATAAATAGGACCAG+AGG | + | chr2.1:36313881-36313900 | None:intergenic | 35.0% | |
| TTCAAAATGTGACTCCTTTG+GGG | + | chr2.1:36311738-36311757 | None:intergenic | 35.0% | |
| TTCTTCAACTTTATGACAGC+AGG | + | chr2.1:36313386-36313405 | None:intergenic | 35.0% | |
| TTGAAGTATGCTTCTCTTCA+AGG | - | chr2.1:36312784-36312803 | MS.gene067367:intron | 35.0% | |
| TTTCCACTCACTTATCATCT+TGG | - | chr2.1:36313302-36313321 | MS.gene067367:intron | 35.0% | |
| ! | AAGACTTGAACCCTTTTCTA+GGG | - | chr2.1:36312929-36312948 | MS.gene067367:CDS | 35.0% |
| ! | AATACCTTTTCACCCTTTTG+TGG | + | chr2.1:36313568-36313587 | None:intergenic | 35.0% |
| ! | ATATTTCAGGTACTTTCCGA+TGG | - | chr2.1:36314184-36314203 | MS.gene067367:intron | 35.0% |
| ! | ATCCTTTTTGCAGGATTTAG+TGG | - | chr2.1:36313505-36313524 | MS.gene067367:intron | 35.0% |
| ! | GGATCTTGAGTGATTTTGTT+GGG | + | chr2.1:36313050-36313069 | None:intergenic | 35.0% |
| ! | TGCCTTGAGTACAAAGATTT+TGG | - | chr2.1:36313704-36313723 | MS.gene067367:intron | 35.0% |
| ! | TTGAAGAGAAGCATACTTCA+AGG | + | chr2.1:36312785-36312804 | None:intergenic | 35.0% |
| ! | TTGATTGGTTGCTAACTCTT+TGG | + | chr2.1:36311660-36311679 | None:intergenic | 35.0% |
| !! | AATAATAATTGAGTTGGGGC+TGG | - | chr2.1:36312701-36312720 | MS.gene067367:intron | 35.0% |
| !! | GCTAACAAACCTTTTAAGAG+TGG | + | chr2.1:36313844-36313863 | None:intergenic | 35.0% |
| !! | GTTGCTAACATGAAAGCATT+TGG | - | chr2.1:36314256-36314275 | MS.gene067367:intron | 35.0% |
| !! | TCTGGACTGATTTTTGAACT+AGG | + | chr2.1:36313930-36313949 | None:intergenic | 35.0% |
| !!! | CTTTTAGGTTGCTATGTTGT+TGG | - | chr2.1:36313640-36313659 | MS.gene067367:intron | 35.0% |
| !!! | TTTTTTTCGGTGATTGAAGC+TGG | - | chr2.1:36312819-36312838 | MS.gene067367:intron | 35.0% |
| AAACCAACCTGTGAATTGGT+CGG | + | chr2.1:36312026-36312045 | None:intergenic | 40.0% | |
| AAGAGTCCAACAAATGCAGA+AGG | + | chr2.1:36314502-36314521 | None:intergenic | 40.0% | |
| AGAGTCCAACAAATGCAGAA+GGG | + | chr2.1:36314501-36314520 | None:intergenic | 40.0% | |
| ATTGGAAGAGTTGTGACTTC+TGG | - | chr2.1:36313173-36313192 | MS.gene067367:intron | 40.0% | |
| CAAACCACAAAAGGGTGAAA+AGG | - | chr2.1:36313561-36313580 | MS.gene067367:intron | 40.0% | |
| CCAAACAAATGATGAGTACC+TGG | + | chr2.1:36311919-36311938 | None:intergenic | 40.0% | |
| CCAGGTACTCATCATTTGTT+TGG | - | chr2.1:36311916-36311935 | MS.gene067367:CDS | 40.0% | |
| CCATACTAGATAACCAATGG+CGG | + | chr2.1:36313071-36313090 | None:intergenic | 40.0% | |
| CTAGAAAAGGGTTCAAGTCT+TGG | + | chr2.1:36312930-36312949 | None:intergenic | 40.0% | |
| CTCTTCAATGGAGATAACGT+TGG | - | chr2.1:36314517-36314536 | MS.gene067367:CDS | 40.0% | |
| GAGAGCTTCACCAAATATGA+TGG | - | chr2.1:36314327-36314346 | MS.gene067367:CDS | 40.0% | |
| GATCAAACCAACCTGTGAAT+TGG | + | chr2.1:36312030-36312049 | None:intergenic | 40.0% | |
| GGTTTCTTCCTTGTAGTTGA+AGG | + | chr2.1:36313811-36313830 | None:intergenic | 40.0% | |
| GTATTTGTTTCAGCAGCATC+TGG | - | chr2.1:36313583-36313602 | MS.gene067367:intron | 40.0% | |
| GTCCACTAAATCCTGCAAAA+AGG | + | chr2.1:36313510-36313529 | None:intergenic | 40.0% | |
| TTACCATCCGGTTCAATATC+CGG | - | chr2.1:36312122-36312141 | MS.gene067367:intron | 40.0% | |
| TTGGAAGAGTTGTGACTTCT+GGG | - | chr2.1:36313174-36313193 | MS.gene067367:intron | 40.0% | |
| TTTGCAACTCCATTAACTCC+AGG | - | chr2.1:36311893-36311912 | MS.gene067367:CDS | 40.0% | |
| ! | CAAGACTTGAACCCTTTTCT+AGG | - | chr2.1:36312928-36312947 | MS.gene067367:CDS | 40.0% |
| ! | CAGGTTGAATTAACTGCTGT+TGG | + | chr2.1:36312058-36312077 | None:intergenic | 40.0% |
| ! | CCAGAAAAGAGAGTGTAGTT+CGG | + | chr2.1:36313357-36313376 | None:intergenic | 40.0% |
| ! | CGGATCTTGAGTGATTTTGT+TGG | + | chr2.1:36313051-36313070 | None:intergenic | 40.0% |
| ! | GCATTTGTTGGACTCTTCAA+TGG | - | chr2.1:36314505-36314524 | MS.gene067367:CDS | 40.0% |
| ! | TAACTAGAGCATCAATAGCC+TGG | + | chr2.1:36313154-36313173 | None:intergenic | 40.0% |
| ! | TGATGATGCCTTCAACTACA+AGG | - | chr2.1:36313800-36313819 | MS.gene067367:intron | 40.0% |
| ! | TTTAGTCTTTCGTTGAAGCC+AGG | - | chr2.1:36311773-36311792 | MS.gene067367:CDS | 40.0% |
| ! | TTTGGTAGAGTGTCTGTTTG+TGG | - | chr2.1:36314274-36314293 | MS.gene067367:intron | 40.0% |
| !! | AGGTTCTAAGTTAACACCAC+CGG | + | chr2.1:36312765-36312784 | None:intergenic | 40.0% |
| !! | GGTTATGGGAGTATTCACTT+GGG | - | chr2.1:36313223-36313242 | MS.gene067367:intron | 40.0% |
| !! | TGGTTATGGGAGTATTCACT+TGG | - | chr2.1:36313222-36313241 | MS.gene067367:intron | 40.0% |
| !! | TTTAGTGGACTGTCAGCTTA+TGG | - | chr2.1:36313520-36313539 | MS.gene067367:intron | 40.0% |
| !!! | TCCTATTTTGGCACTTTTCC+AGG | - | chr2.1:36313133-36313152 | MS.gene067367:intron | 40.0% |
| AATCACTCAAGATCCGCCAT+TGG | - | chr2.1:36313055-36313074 | MS.gene067367:intron | 45.0% | |
| AGCATCCCTTCTGCATTTGT+TGG | - | chr2.1:36314493-36314512 | MS.gene067367:CDS | 45.0% | |
| AGTTGCAGGTGATTGAAGAC+AGG | - | chr2.1:36314455-36314474 | MS.gene067367:CDS | 45.0% | |
| ATGCTTCTCTTCAAGGTCTC+AGG | - | chr2.1:36312791-36312810 | MS.gene067367:intron | 45.0% | |
| GGCTGAGTACAGTGTAGTTA+AGG | - | chr2.1:36313244-36313263 | MS.gene067367:intron | 45.0% | |
| GTGATTGAAGACAGGTCGTT+GGG | - | chr2.1:36314463-36314482 | MS.gene067367:CDS | 45.0% | |
| GTGGTTCTTAGTACTCCATC+TGG | + | chr2.1:36313995-36314014 | None:intergenic | 45.0% | |
| TCAAGAACCGACCAATTCAC+AGG | - | chr2.1:36312016-36312035 | MS.gene067367:intron | 45.0% | |
| TCGCATTGAAGATTCCCCAA+AGG | - | chr2.1:36311721-36311740 | MS.gene067367:CDS | 45.0% | |
| ! | AGAACATGACGGAATCGACA+CGG | + | chr2.1:36312486-36312505 | None:intergenic | 45.0% |
| ! | CCGAACTACACTCTCTTTTC+TGG | - | chr2.1:36313354-36313373 | MS.gene067367:intron | 45.0% |
| ! | CCGCCATTGGTTATCTAGTA+TGG | - | chr2.1:36313068-36313087 | MS.gene067367:intron | 45.0% |
| !! | AAGCGCTGTAGCTTTTCATG+CGG | + | chr2.1:36311856-36311875 | None:intergenic | 45.0% |
| !! | GCCTGGAAAAGTGCCAAAAT+AGG | + | chr2.1:36313137-36313156 | None:intergenic | 45.0% |
| !! | GGTTCTAAGTTAACACCACC+GGG | + | chr2.1:36312764-36312783 | None:intergenic | 45.0% |
| !! | TTCACAGGTTGGTTTGATCG+TGG | - | chr2.1:36312031-36312050 | MS.gene067367:intron | 45.0% |
| !!! | TATATCATATATTTTTAATT+TGG | + | chr2.1:36312652-36312671 | None:intergenic | 5.0% |
| AACTCCATTAACTCCAGGCC+AGG | - | chr2.1:36311898-36311917 | MS.gene067367:CDS | 50.0% | |
| AGTACCTGGCCTGGAGTTAA+TGG | + | chr2.1:36311905-36311924 | None:intergenic | 50.0% | |
| CAAATGATGAGTACCTGGCC+TGG | + | chr2.1:36311914-36311933 | None:intergenic | 50.0% | |
| CTGTGCTGGGAGCCAAAAAA+AGG | - | chr2.1:36313663-36313682 | MS.gene067367:intron | 50.0% | |
| GAACCGACCAATTCACAGGT+TGG | - | chr2.1:36312020-36312039 | MS.gene067367:intron | 50.0% | |
| GCGATGTCAAATACTCCCTC+TGG | - | chr2.1:36313862-36313881 | MS.gene067367:intron | 50.0% | |
| GGTGATTGAAGACAGGTCGT+TGG | - | chr2.1:36314462-36314481 | MS.gene067367:CDS | 50.0% | |
| TAAGTTAACACCACCGGGCA+GGG | + | chr2.1:36312759-36312778 | None:intergenic | 50.0% | |
| TCAGCAGCATCTGGATCAGT+TGG | - | chr2.1:36313592-36313611 | MS.gene067367:intron | 50.0% | |
| TCTTCGCAATGGTCAGTTGC+AGG | - | chr2.1:36314441-36314460 | MS.gene067367:CDS | 50.0% | |
| ! | GCTATGTTGTTGGCTGTGCT+GGG | - | chr2.1:36313650-36313669 | MS.gene067367:intron | 50.0% |
| ! | TGCTATGTTGTTGGCTGTGC+TGG | - | chr2.1:36313649-36313668 | MS.gene067367:intron | 50.0% |
| !! | AGTGGACTGTCAGCTTATGG+AGG | - | chr2.1:36313523-36313542 | MS.gene067367:intron | 50.0% |
| ACTATCTGCGTGCGATGGCA+TGG | + | chr2.1:36312851-36312870 | None:intergenic | 55.0% | |
| ATAGCCACACCCAGCCTTGA+AGG | - | chr2.1:36312726-36312745 | MS.gene067367:intron | 55.0% | |
| CCACCGGATATTGAACCGGA+TGG | + | chr2.1:36312128-36312147 | None:intergenic | 55.0% | |
| CCATCCGGTTCAATATCCGG+TGG | - | chr2.1:36312125-36312144 | MS.gene067367:intron | 55.0% | |
| CCTGCCACCGGATATTGAAC+CGG | + | chr2.1:36312132-36312151 | None:intergenic | 55.0% | |
| CGGTTCAATATCCGGTGGCA+GGG | - | chr2.1:36312130-36312149 | MS.gene067367:intron | 55.0% | |
| CTAAGTTAACACCACCGGGC+AGG | + | chr2.1:36312760-36312779 | None:intergenic | 55.0% | |
| GGTTCAATATCCGGTGGCAG+GGG | - | chr2.1:36312131-36312150 | MS.gene067367:intron | 55.0% | |
| TAGCCACACCCAGCCTTGAA+GGG | - | chr2.1:36312727-36312746 | MS.gene067367:intron | 55.0% | |
| TGCAGACTATCTGCGTGCGA+TGG | + | chr2.1:36312856-36312875 | None:intergenic | 55.0% | |
| CCGGTTCAATATCCGGTGGC+AGG | - | chr2.1:36312129-36312148 | MS.gene067367:intron | 60.0% | |
| GATCCCTTCAAGGCTGGGTG+TGG | + | chr2.1:36312733-36312752 | None:intergenic | 60.0% | |
| GGACGGATCCCTTCAAGGCT+GGG | + | chr2.1:36312738-36312757 | None:intergenic | 60.0% | |
| TCAATATCCGGTGGCAGGGG+CGG | - | chr2.1:36312134-36312153 | MS.gene067367:intron | 60.0% | |
| TTAACACCACCGGGCAGGGA+CGG | + | chr2.1:36312755-36312774 | None:intergenic | 60.0% | |
| GGCAGGGACGGATCCCTTCA+AGG | + | chr2.1:36312743-36312762 | None:intergenic | 65.0% | |
| GGGACGGATCCCTTCAAGGC+TGG | + | chr2.1:36312739-36312758 | None:intergenic | 65.0% | |
| TGAAGGGATCCGTCCCTGCC+CGG | - | chr2.1:36312743-36312762 | MS.gene067367:intron | 65.0% | |
| AGGGATCCGTCCCTGCCCGG+TGG | - | chr2.1:36312746-36312765 | MS.gene067367:intron | 75.0% | |
| CCCAGATCCGCCCCTGCCAC+CGG | + | chr2.1:36312144-36312163 | None:intergenic | 75.0% | |
| CCGGTGGCAGGGGCGGATCT+GGG | - | chr2.1:36312141-36312160 | MS.gene067367:intron | 75.0% | |
| TCCGGTGGCAGGGGCGGATC+TGG | - | chr2.1:36312140-36312159 | MS.gene067367:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 36311651 | 36314570 | 36311651 | ID=MS.gene067367 |
| chr2.1 | mRNA | 36311651 | 36314570 | 36311651 | ID=MS.gene067367.t1;Parent=MS.gene067367 |
| chr2.1 | exon | 36314302 | 36314570 | 36314302 | ID=MS.gene067367.t1.exon1;Parent=MS.gene067367.t1 |
| chr2.1 | CDS | 36314302 | 36314570 | 36314302 | ID=cds.MS.gene067367.t1;Parent=MS.gene067367.t1 |
| chr2.1 | exon | 36312889 | 36313066 | 36312889 | ID=MS.gene067367.t1.exon2;Parent=MS.gene067367.t1 |
| chr2.1 | CDS | 36312889 | 36313066 | 36312889 | ID=cds.MS.gene067367.t1;Parent=MS.gene067367.t1 |
| chr2.1 | exon | 36312537 | 36312703 | 36312537 | ID=MS.gene067367.t1.exon3;Parent=MS.gene067367.t1 |
| chr2.1 | CDS | 36312537 | 36312703 | 36312537 | ID=cds.MS.gene067367.t1;Parent=MS.gene067367.t1 |
| chr2.1 | exon | 36312364 | 36312450 | 36312364 | ID=MS.gene067367.t1.exon4;Parent=MS.gene067367.t1 |
| chr2.1 | CDS | 36312364 | 36312450 | 36312364 | ID=cds.MS.gene067367.t1;Parent=MS.gene067367.t1 |
| chr2.1 | exon | 36311651 | 36312028 | 36311651 | ID=MS.gene067367.t1.exon5;Parent=MS.gene067367.t1 |
| chr2.1 | CDS | 36311651 | 36312028 | 36311651 | ID=cds.MS.gene067367.t1;Parent=MS.gene067367.t1 |
| Gene Sequence |
| Protein sequence |
