Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068028.t1 | XP_003608387.1 | 97.6 | 410 | 10 | 0 | 1 | 410 | 1 | 410 | 7.00E-238 | 832.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068028.t1 | Q8H183 | 80.6 | 408 | 73 | 1 | 4 | 411 | 6 | 407 | 1.3e-200 | 700.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068028.t1 | G7JV36 | 97.6 | 410 | 10 | 0 | 1 | 410 | 1 | 410 | 5.0e-238 | 832.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049283 | MS.gene068028 | 0.804867 | 1.76E-49 | -1.69E-46 |
| MS.gene049424 | MS.gene068028 | 0.824415 | 8.17E-54 | -1.69E-46 |
| MS.gene049983 | MS.gene068028 | 0.810417 | 1.16E-50 | -1.69E-46 |
| MS.gene050384 | MS.gene068028 | 0.826627 | 2.45E-54 | -1.69E-46 |
| MS.gene050386 | MS.gene068028 | 0.813021 | 3.16E-51 | -1.69E-46 |
| MS.gene050414 | MS.gene068028 | 0.804301 | 2.31E-49 | -1.69E-46 |
| MS.gene050559 | MS.gene068028 | 0.822478 | 2.32E-53 | -1.69E-46 |
| MS.gene050561 | MS.gene068028 | 0.816253 | 6.08E-52 | -1.69E-46 |
| MS.gene050562 | MS.gene068028 | 0.813327 | 2.71E-51 | -1.69E-46 |
| MS.gene05059 | MS.gene068028 | 0.803647 | 3.15E-49 | -1.69E-46 |
| MS.gene050945 | MS.gene068028 | 0.800802 | 1.21E-48 | -1.69E-46 |
| MS.gene051154 | MS.gene068028 | 0.805838 | 1.10E-49 | -1.69E-46 |
| MS.gene051343 | MS.gene068028 | 0.801138 | 1.04E-48 | -1.69E-46 |
| MS.gene051699 | MS.gene068028 | 0.811554 | 6.61E-51 | -1.69E-46 |
| MS.gene052239 | MS.gene068028 | -0.835888 | 1.29E-56 | -1.69E-46 |
| MS.gene053079 | MS.gene068028 | 0.816207 | 6.23E-52 | -1.69E-46 |
| MS.gene053188 | MS.gene068028 | 0.800413 | 1.46E-48 | -1.69E-46 |
| MS.gene053575 | MS.gene068028 | 0.953248 | 4.17E-111 | -1.69E-46 |
| MS.gene054893 | MS.gene068028 | 0.803202 | 3.90E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene068028 | 0.81117 | 8.01E-51 | -1.69E-46 |
| MS.gene058008 | MS.gene068028 | 0.856599 | 2.88E-62 | -1.69E-46 |
| MS.gene058009 | MS.gene068028 | 0.860128 | 2.56E-63 | -1.69E-46 |
| MS.gene058010 | MS.gene068028 | 0.825228 | 5.26E-54 | -1.69E-46 |
| MS.gene058159 | MS.gene068028 | 0.807808 | 4.22E-50 | -1.69E-46 |
| MS.gene05952 | MS.gene068028 | 0.815419 | 9.33E-52 | -1.69E-46 |
| MS.gene060259 | MS.gene068028 | 0.814873 | 1.23E-51 | -1.69E-46 |
| MS.gene060840 | MS.gene068028 | 0.838142 | 3.43E-57 | -1.69E-46 |
| MS.gene060933 | MS.gene068028 | 0.80986 | 1.54E-50 | -1.69E-46 |
| MS.gene060935 | MS.gene068028 | 0.822475 | 2.32E-53 | -1.69E-46 |
| MS.gene060937 | MS.gene068028 | 0.822192 | 2.70E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068028.t1 | MTR_4g093570 | 97.561 | 410 | 10 | 0 | 1 | 410 | 1 | 410 | 0.0 | 838 |
| MS.gene068028.t1 | MTR_4g093580 | 85.714 | 413 | 57 | 1 | 1 | 411 | 1 | 413 | 0.0 | 750 |
| MS.gene068028.t1 | MTR_4g093580 | 87.097 | 372 | 48 | 0 | 40 | 411 | 9 | 380 | 0.0 | 692 |
| MS.gene068028.t1 | MTR_4g093580 | 87.313 | 268 | 34 | 0 | 144 | 411 | 1 | 268 | 0.0 | 505 |
| MS.gene068028.t1 | MTR_2g086600 | 28.364 | 275 | 177 | 6 | 123 | 389 | 30 | 292 | 5.91e-26 | 107 |
| MS.gene068028.t1 | MTR_6g034725 | 82.927 | 41 | 7 | 0 | 180 | 220 | 1 | 41 | 1.74e-17 | 76.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068028.t1 | AT5G64370 | 80.637 | 408 | 73 | 1 | 4 | 411 | 6 | 407 | 0.0 | 685 |
| MS.gene068028.t1 | AT2G27450 | 28.986 | 276 | 174 | 8 | 123 | 389 | 31 | 293 | 5.40e-26 | 107 |
| MS.gene068028.t1 | AT2G27450 | 28.832 | 274 | 173 | 8 | 125 | 389 | 60 | 320 | 2.11e-25 | 105 |
| MS.gene068028.t1 | AT2G27450 | 30.303 | 231 | 132 | 5 | 171 | 389 | 1 | 214 | 1.16e-23 | 98.6 |
| MS.gene068028.t1 | AT5G12040 | 23.762 | 303 | 184 | 11 | 96 | 385 | 90 | 358 | 2.10e-11 | 65.5 |
Find 108 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGAACACTGCCGTCGTAAT+TGG | 0.183164 | 4.3:+20840790 | MS.gene068028:CDS |
| GAGAGAGCTGTAGCAGATTC+TGG | 0.218580 | 4.3:-20838015 | None:intergenic |
| CCAAAAGCTAGCCAATTTAA+AGG | 0.249204 | 4.3:-20841055 | None:intergenic |
| CCTTTAAATTGGCTAGCTTT+TGG | 0.257247 | 4.3:+20841055 | MS.gene068028:CDS |
| GTAGGCACCATCCTTTAAAT+TGG | 0.259784 | 4.3:+20841044 | MS.gene068028:CDS |
| ATGACTTGAGGCTCAAATTC+TGG | 0.264920 | 4.3:-20841647 | None:intergenic |
| CCAAATGCTGTTTCAAATAC+AGG | 0.269155 | 4.3:-20840995 | None:intergenic |
| TTGCCATCACCAGATGTAAA+TGG | 0.271319 | 4.3:-20841413 | None:intergenic |
| GGGAATCACGGCAATATAAT+TGG | 0.276293 | 4.3:+20840811 | MS.gene068028:CDS |
| AAACCAGCACACGCAGATTT+TGG | 0.292452 | 4.3:+20841434 | MS.gene068028:CDS |
| TTCACATCTCTCTCAAGAAT+TGG | 0.306659 | 4.3:-20840751 | None:intergenic |
| CACCATCTTTATCACGTAAC+AGG | 0.314327 | 4.3:+20841504 | MS.gene068028:CDS |
| AGTCCCCAACTCTTGGAATA+TGG | 0.318877 | 4.3:-20840931 | None:intergenic |
| CCTGTATTTGAAACAGCATT+TGG | 0.321930 | 4.3:+20840995 | MS.gene068028:CDS |
| GAAGTCAATCGTTTGCTTAC+CGG | 0.328217 | 4.3:+20837955 | MS.gene068028:CDS |
| GAACCAGCAGCATCAATAAT+TGG | 0.344011 | 4.3:-20840478 | None:intergenic |
| CCCAACAACTGCTCACTTTG+TGG | 0.348484 | 4.3:+20840423 | MS.gene068028:CDS |
| ATTGATGCTGCTGGTTCATC+GGG | 0.349034 | 4.3:+20840484 | MS.gene068028:CDS |
| ATAAAACAACGAACCTCTAT+TGG | 0.350893 | 4.3:-20841145 | None:intergenic |
| CCTACCATAACATATGTTAA+TGG | 0.359055 | 4.3:-20841026 | None:intergenic |
| TTGCTTCAATCAACCGGGTT+GGG | 0.362357 | 4.3:+20841372 | MS.gene068028:CDS |
| CAATGAGAGCACATATTATA+TGG | 0.366751 | 4.3:+20840955 | MS.gene068028:CDS |
| TCCAACGATGGTTCTATTTG+TGG | 0.375589 | 4.3:+20837615 | MS.gene068028:CDS |
| TCACCAGATGTAAATGGATT+GGG | 0.386036 | 4.3:-20841407 | None:intergenic |
| TCTTAAACCGCATCATTTCC+AGG | 0.390604 | 4.3:+20837671 | MS.gene068028:CDS |
| ATTGCCATTAACATATGTTA+TGG | 0.390663 | 4.3:+20841022 | MS.gene068028:CDS |
| TATTGATGCTGCTGGTTCAT+CGG | 0.405269 | 4.3:+20840483 | MS.gene068028:CDS |
| ACTTTGTTGCTTCAATCAAC+CGG | 0.408788 | 4.3:+20841366 | MS.gene068028:CDS |
| TCACATCTCTCTCAAGAATT+GGG | 0.410904 | 4.3:-20840750 | None:intergenic |
| TTAAGATCTCTTATGAAGTA+AGG | 0.417246 | 4.3:-20841678 | None:intergenic |
| CAGGCAATATAAAGACAAAT+GGG | 0.420095 | 4.3:+20841565 | MS.gene068028:CDS |
| GCAGGCAATATAAAGACAAA+TGG | 0.433044 | 4.3:+20841564 | MS.gene068028:CDS |
| AGAGAGCTGTAGCAGATTCT+GGG | 0.435033 | 4.3:-20838014 | None:intergenic |
| ACTCGTATCGTGCAGTCATT+CGG | 0.435404 | 4.3:-20841592 | None:intergenic |
| AAGTCAATCGTTTGCTTACC+GGG | 0.436307 | 4.3:+20837956 | MS.gene068028:CDS |
| GGAACACTGCCGTCGTAATT+GGG | 0.441423 | 4.3:+20840791 | MS.gene068028:CDS |
| TTCCCCAATCCATTTACATC+TGG | 0.449318 | 4.3:+20841404 | MS.gene068028:CDS |
| TCATTGAAGTCCCCAACTCT+TGG | 0.451173 | 4.3:-20840938 | None:intergenic |
| AGAACCATATTCCAAGAGTT+GGG | 0.459086 | 4.3:+20840927 | MS.gene068028:intron |
| TATTATATGGAAGGAAATAC+TGG | 0.461685 | 4.3:+20840968 | MS.gene068028:CDS |
| ATCACCAGATGTAAATGGAT+TGG | 0.462321 | 4.3:-20841408 | None:intergenic |
| AGTTCACCAACGGTGGCAGC+AGG | 0.464830 | 4.3:-20841106 | None:intergenic |
| TTTGTTGATTCTCCATCAGC+AGG | 0.469168 | 4.3:-20840682 | None:intergenic |
| CAGAACCATATTCCAAGAGT+TGG | 0.474049 | 4.3:+20840926 | MS.gene068028:intron |
| TCCACAAAGTGAGCAGTTGT+TGG | 0.476086 | 4.3:-20840424 | None:intergenic |
| TGAACCTATGTGGCCAATAG+AGG | 0.477225 | 4.3:+20841132 | MS.gene068028:CDS |
| GAACCTCGAGTTGTGAGGGT+TGG | 0.495984 | 4.3:+20840376 | MS.gene068028:CDS |
| CAAATGCTGTTTCAAATACA+GGG | 0.500838 | 4.3:-20840994 | None:intergenic |
| GTTGCTTCAATCAACCGGGT+TGG | 0.501321 | 4.3:+20841371 | MS.gene068028:CDS |
| GAGCCAATTATTGATGCTGC+TGG | 0.502901 | 4.3:+20840475 | MS.gene068028:CDS |
| TTGCTTACCGGGCTTAATTG+TGG | 0.511919 | 4.3:+20837967 | MS.gene068028:CDS |
| CCATTAACATATGTTATGGT+AGG | 0.512104 | 4.3:+20841026 | MS.gene068028:CDS |
| CGAACCTCTATTGGCCACAT+AGG | 0.516696 | 4.3:-20841136 | None:intergenic |
| TCCCGTGTACAAAAGGCAAA+TGG | 0.518582 | 4.3:-20840634 | None:intergenic |
| ACATGGATCTTAACTTGTGC+AGG | 0.523148 | 4.3:+20841546 | MS.gene068028:CDS |
| TAAGATCTCTTATGAAGTAA+GGG | 0.530932 | 4.3:-20841677 | None:intergenic |
| GATGGTGTGCAGGATGCATC+TGG | 0.531632 | 4.3:-20841488 | None:intergenic |
| TAATTTGATTGCAGGAAGCA+TGG | 0.533298 | 4.3:+20840605 | MS.gene068028:intron |
| CTTTGTTGCTTCAATCAACC+GGG | 0.534469 | 4.3:+20841367 | MS.gene068028:CDS |
| TATCCTTGAGAAGATGATGA+AGG | 0.543490 | 4.3:-20837647 | None:intergenic |
| TTCCCTTCATCATCTTCTCA+AGG | 0.544283 | 4.3:+20837644 | MS.gene068028:CDS |
| TTCAACCCTGCTGCCACCGT+TGG | 0.546662 | 4.3:+20841100 | MS.gene068028:CDS |
| GAGAGCACATATTATATGGA+AGG | 0.557147 | 4.3:+20840959 | MS.gene068028:CDS |
| TGACCAAAATCTGCGTGTGC+TGG | 0.559199 | 4.3:-20841437 | None:intergenic |
| AAATAGAACCATCGTTGGAA+AGG | 0.568254 | 4.3:-20837611 | None:intergenic |
| TGAACCATGGAGAGGTTATG+TGG | 0.571388 | 4.3:+20840770 | MS.gene068028:CDS |
| TCTTATGAAGTAAGGGGTCA+CGG | 0.579111 | 4.3:-20841670 | None:intergenic |
| AAGAGAACCTCGAGTTGTGA+GGG | 0.579546 | 4.3:+20840372 | MS.gene068028:CDS |
| CCACAAAGTGAGCAGTTGTT+GGG | 0.579558 | 4.3:-20840423 | None:intergenic |
| AAGCTAGCCAATTTAAAGGA+TGG | 0.586492 | 4.3:-20841051 | None:intergenic |
| GCCACAAATAGAACCATCGT+TGG | 0.590523 | 4.3:-20837616 | None:intergenic |
| AATCCATTTACATCTGGTGA+TGG | 0.592464 | 4.3:+20841410 | MS.gene068028:CDS |
| ATCCTTGAGAAGATGATGAA+GGG | 0.596320 | 4.3:-20837646 | None:intergenic |
| AAAGTGAGCAGTTGTTGGGA+TGG | 0.597586 | 4.3:-20840419 | None:intergenic |
| CAACTCAACCTTTCCAACGA+TGG | 0.598188 | 4.3:+20837603 | MS.gene068028:CDS |
| TAAGAGAACCTCGAGTTGTG+AGG | 0.598332 | 4.3:+20840371 | MS.gene068028:CDS |
| ACGTGATAAAGATGGTGTGC+AGG | 0.598654 | 4.3:-20841498 | None:intergenic |
| GAGATGGAGAAGTCTCAAAA+CGG | 0.600165 | 4.3:+20837567 | None:intergenic |
| TGATGCTGCTGGTTCATCGG+GGG | 0.604615 | 4.3:+20840486 | MS.gene068028:CDS |
| GCCGTCGTAATTGGGAATCA+CGG | 0.610219 | 4.3:+20840799 | MS.gene068028:CDS |
| TATAATTGGAATACACAGGA+AGG | 0.612226 | 4.3:+20840825 | MS.gene068028:CDS |
| CTTTGCAAAGAAGTATAACA+TGG | 0.612813 | 4.3:+20840717 | MS.gene068028:CDS |
| CACCAGATGTAAATGGATTG+GGG | 0.615020 | 4.3:-20841406 | None:intergenic |
| TCTTTATCACGTAACAGGGA+TGG | 0.617255 | 4.3:+20841509 | MS.gene068028:CDS |
| AAACCAACCCTCACAACTCG+AGG | 0.620062 | 4.3:-20840379 | None:intergenic |
| AAGGGGTCACGGATGACTTG+AGG | 0.621650 | 4.3:-20841659 | None:intergenic |
| GCAATATAATTGGAATACAC+AGG | 0.623995 | 4.3:+20840821 | MS.gene068028:CDS |
| TTTGTACACGGGAGAAAAGG+TGG | 0.624689 | 4.3:+20840644 | MS.gene068028:CDS |
| GGAATGTCTCAGTCCCAACC+CGG | 0.625592 | 4.3:-20841385 | None:intergenic |
| GAATTTGCAGAACCTGCTGA+TGG | 0.628090 | 4.3:+20840670 | MS.gene068028:CDS |
| AAGATCTCTTATGAAGTAAG+GGG | 0.629006 | 4.3:-20841676 | None:intergenic |
| ACAGCTCTCTCTGTCAAACA+TGG | 0.630470 | 4.3:+20838027 | MS.gene068028:CDS |
| TGTTCCACATAACCTCTCCA+TGG | 0.634118 | 4.3:-20840774 | None:intergenic |
| GAACCATATTCCAAGAGTTG+GGG | 0.634849 | 4.3:+20840928 | MS.gene068028:intron |
| CTTGAGAGAGATGTGAACCA+TGG | 0.640207 | 4.3:+20840757 | MS.gene068028:CDS |
| TTGATGCTGCTGGTTCATCG+GGG | 0.643399 | 4.3:+20840485 | MS.gene068028:CDS |
| TGGCTTATTAGTAACAGACA+TGG | 0.657372 | 4.3:+20841529 | MS.gene068028:CDS |
| TGCACGATACGAGTTGTATG+CGG | 0.660405 | 4.3:+20841601 | MS.gene068028:CDS |
| GTTCACCAACGGTGGCAGCA+GGG | 0.664314 | 4.3:-20841105 | None:intergenic |
| TCCCTGTTACGTGATAAAGA+TGG | 0.671678 | 4.3:-20841506 | None:intergenic |
| GCCGTGATTCCCAATTACGA+CGG | 0.672036 | 4.3:-20840800 | None:intergenic |
| AGGTTCACTGAGTTCACCAA+CGG | 0.675482 | 4.3:-20841116 | None:intergenic |
| ACCATCTTTATCACGTAACA+GGG | 0.675551 | 4.3:+20841505 | MS.gene068028:CDS |
| AGAATGACCTGGAAATGATG+CGG | 0.682019 | 4.3:-20837678 | None:intergenic |
| TTCACTGAGTTCACCAACGG+TGG | 0.688022 | 4.3:-20841113 | None:intergenic |
| AGGCAATATAAAGACAAATG+GGG | 0.695987 | 4.3:+20841566 | MS.gene068028:CDS |
| GAGAGATGTGAACCATGGAG+AGG | 0.699125 | 4.3:+20840762 | MS.gene068028:CDS |
| GTGAACTCAGTGAACCTATG+TGG | 0.733745 | 4.3:+20841122 | MS.gene068028:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAGTAATAATGATAATAAT+TGG | - | chr4.3:20837713-20837732 | None:intergenic | 10.0% |
| !! | AATAATGATGAAAATGATAA+TGG | - | chr4.3:20839098-20839117 | None:intergenic | 15.0% |
| !! | TATATAAAAATAAACACTGT+AGG | - | chr4.3:20840587-20840606 | None:intergenic | 15.0% |
| !!! | AAATCATATTTTTGTTCAAA+AGG | - | chr4.3:20839561-20839542 | None:intergenic | 15.0% |
| !!! | ATCTATACTTCAATTTTTAT+CGG | + | chr4.3:20837739-20837758 | MS.gene068028:intron | 15.0% |
| !!! | TTTTTATATAATTTGATTGC+AGG | + | chr4.3:20840597-20840616 | MS.gene068028:intron | 15.0% |
| !! | ATGAACAAAGATGATAAATT+CGG | - | chr4.3:20837779-20837798 | None:intergenic | 20.0% |
| !! | ATTATATTATTCAATCTGCA+TGG | + | chr4.3:20837868-20837887 | MS.gene068028:intron | 20.0% |
| !! | ATTGATATTTCGTTAACTAT+AGG | + | chr4.3:20839754-20839773 | MS.gene068028:intron | 20.0% |
| !! | TCAATTATCATAAATTTGCA+AGG | - | chr4.3:20838441-20838460 | None:intergenic | 20.0% |
| !! | TTGACTAAACAATAGAAAAT+TGG | + | chr4.3:20841278-20841297 | MS.gene068028:intron | 20.0% |
| !! | TTGATATTTCGTTAACTATA+GGG | + | chr4.3:20839755-20839774 | MS.gene068028:intron | 20.0% |
| !! | TTTGAACAAAAATATGATTG+TGG | - | chr4.3:20839510-20839529 | None:intergenic | 20.0% |
| !!! | AAATATGCTTCTAAAACAAT+TGG | + | chr4.3:20838102-20838121 | MS.gene068028:intron | 20.0% |
| !!! | AAGTATTTTCTTATGTGTAT+TGG | - | chr4.3:20838960-20838979 | None:intergenic | 20.0% |
| !!! | CAATCATATTTTTGTTCAAA+AGG | + | chr4.3:20839510-20839529 | MS.gene068028:intron | 20.0% |
| !!! | CTTATTTCTTATTTAAGCTA+TGG | + | chr4.3:20840278-20840297 | MS.gene068028:intron | 20.0% |
| !!! | GTAGTTTTGATTAAAATTCT+TGG | - | chr4.3:20839019-20839038 | None:intergenic | 20.0% |
| !!! | TAATCTTTCTTTTTCTTGTA+TGG | + | chr4.3:20840168-20840187 | MS.gene068028:intron | 20.0% |
| ! | AAGTTCATAATCTATGACTA+AGG | - | chr4.3:20838690-20838709 | None:intergenic | 25.0% |
| ! | ACCATTATTGATAAACTACA+GGG | + | chr4.3:20838836-20838855 | MS.gene068028:intron | 25.0% |
| ! | AGAAAATTGGCATGATTATA+TGG | + | chr4.3:20841291-20841310 | MS.gene068028:intron | 25.0% |
| ! | ATTGATATTTCGTTAACTAC+AGG | - | chr4.3:20838178-20838197 | None:intergenic | 25.0% |
| ! | ATTGCCATTAACATATGTTA+TGG | + | chr4.3:20841022-20841041 | MS.gene068028:CDS | 25.0% |
| ! | TAAATAACATAACATGATCC+AGG | - | chr4.3:20837821-20837840 | None:intergenic | 25.0% |
| ! | TAAGATCTCTTATGAAGTAA+GGG | - | chr4.3:20841680-20841699 | None:intergenic | 25.0% |
| ! | TATGCTTATACTGTCATTAT+AGG | + | chr4.3:20838611-20838630 | MS.gene068028:intron | 25.0% |
| ! | TATTATATGGAAGGAAATAC+TGG | + | chr4.3:20840968-20840987 | MS.gene068028:CDS | 25.0% |
| ! | TCTAATGAACACAAAACATT+TGG | + | chr4.3:20840903-20840922 | MS.gene068028:intron | 25.0% |
| ! | TGACTAACGTTTATCAATTT+CGG | + | chr4.3:20839724-20839743 | MS.gene068028:intron | 25.0% |
| ! | TGACTAACGTTTATCAATTT+CGG | - | chr4.3:20839743-20839724 | None:intergenic | 25.0% |
| ! | TGATATTTCGTTAACTATAG+GGG | + | chr4.3:20839756-20839775 | MS.gene068028:intron | 25.0% |
| ! | TTAAGATCTCTTATGAAGTA+AGG | - | chr4.3:20841681-20841700 | None:intergenic | 25.0% |
| ! | TTCAACAAATCAAAGATTTC+AGG | - | chr4.3:20839383-20839402 | None:intergenic | 25.0% |
| ! | TTGATATTTCGTTAACTACA+GGG | - | chr4.3:20838177-20838196 | None:intergenic | 25.0% |
| ! | TTGTTTCCAACAATGTTTAA+CGG | + | chr4.3:20839992-20840011 | MS.gene068028:intron | 25.0% |
| ! | TTTGAACACAATTTCAGAAA+TGG | - | chr4.3:20839184-20839203 | None:intergenic | 25.0% |
| !! | TTGTTTAGTCAATTTTCTGT+AGG | - | chr4.3:20841270-20841289 | None:intergenic | 25.0% |
| !!! | ATGTTGATGATGACTTAAAT+TGG | + | chr4.3:20839236-20839255 | MS.gene068028:intron | 25.0% |
| !!! | ATTTTAAGTTTACTTGTCTC+AGG | + | chr4.3:20840318-20840337 | MS.gene068028:intron | 25.0% |
| !!! | TATAGGTGTTATTGTTTTTC+AGG | + | chr4.3:20841316-20841335 | MS.gene068028:intron | 25.0% |
| AACAAAAATATGATTGTGGC+AGG | - | chr4.3:20839506-20839525 | None:intergenic | 30.0% | |
| AAGATCTCTTATGAAGTAAG+GGG | - | chr4.3:20841679-20841698 | None:intergenic | 30.0% | |
| AAGTGAATTGTATTCATACC+TGG | - | chr4.3:20838062-20838081 | None:intergenic | 30.0% | |
| AATAAACACTGTAGGATTTC+TGG | - | chr4.3:20840579-20840598 | None:intergenic | 30.0% | |
| ACAAAAATATGATTGTGGCA+GGG | - | chr4.3:20839505-20839524 | None:intergenic | 30.0% | |
| ACTAACGTTTATCAATTTCG+GGG | + | chr4.3:20839726-20839745 | MS.gene068028:intron | 30.0% | |
| ACTAACGTTTATCAATTTCG+GGG | - | chr4.3:20839745-20839726 | None:intergenic | 30.0% | |
| AGAAACAATAATCAGCAGAA+AGG | - | chr4.3:20841194-20841213 | None:intergenic | 30.0% | |
| AGAAATAAGTTTCAATGCAG+AGG | - | chr4.3:20840267-20840286 | None:intergenic | 30.0% | |
| AGCCCAAATAATTCAAATAC+AGG | + | chr4.3:20838803-20838822 | MS.gene068028:intron | 30.0% | |
| AGTGAATTGTATTCATACCT+GGG | - | chr4.3:20838061-20838080 | None:intergenic | 30.0% | |
| ATAAAACAACGAACCTCTAT+TGG | - | chr4.3:20841148-20841167 | None:intergenic | 30.0% | |
| ATATTTCGTTAACTATAGGG+GGG | + | chr4.3:20839758-20839777 | MS.gene068028:intron | 30.0% | |
| ATTATTGATAAACTACAGGG+GGG | + | chr4.3:20838839-20838858 | MS.gene068028:intron | 30.0% | |
| ATTTAAGCTATGGTATTCGT+TGG | + | chr4.3:20840288-20840307 | MS.gene068028:intron | 30.0% | |
| CAAATAATTCAAATACAGGG+GGG | + | chr4.3:20838807-20838826 | MS.gene068028:intron | 30.0% | |
| CATTATTGATAAACTACAGG+GGG | + | chr4.3:20838838-20838857 | MS.gene068028:intron | 30.0% | |
| CCAAATAATTCAAATACAGG+GGG | + | chr4.3:20838806-20838825 | MS.gene068028:intron | 30.0% | |
| CCATTAACATATGTTATGGT+AGG | + | chr4.3:20841026-20841045 | MS.gene068028:CDS | 30.0% | |
| CCATTATTGATAAACTACAG+GGG | + | chr4.3:20838837-20838856 | MS.gene068028:intron | 30.0% | |
| CCCAAATAATTCAAATACAG+GGG | + | chr4.3:20838805-20838824 | MS.gene068028:intron | 30.0% | |
| CCCCTGTATTTGAATTATTT+GGG | - | chr4.3:20838808-20838827 | None:intergenic | 30.0% | |
| CCTACCATAACATATGTTAA+TGG | - | chr4.3:20841029-20841048 | None:intergenic | 30.0% | |
| CGATCATTCAATCCATATTT+CGG | - | chr4.3:20840064-20840083 | None:intergenic | 30.0% | |
| GACCATTATTGATAAACTAC+AGG | + | chr4.3:20838835-20838854 | MS.gene068028:intron | 30.0% | |
| GACTAACGTTTATCAATTTC+GGG | + | chr4.3:20839725-20839744 | MS.gene068028:intron | 30.0% | |
| GACTAACGTTTATCAATTTC+GGG | - | chr4.3:20839744-20839725 | None:intergenic | 30.0% | |
| GATAGTATTGTTGTGTATGT+TGG | - | chr4.3:20839041-20839060 | None:intergenic | 30.0% | |
| GATATTTCGTTAACTATAGG+GGG | + | chr4.3:20839757-20839776 | MS.gene068028:intron | 30.0% | |
| GCAATATAATTGGAATACAC+AGG | + | chr4.3:20840821-20840840 | MS.gene068028:CDS | 30.0% | |
| GCCCAAATAATTCAAATACA+GGG | + | chr4.3:20838804-20838823 | MS.gene068028:intron | 30.0% | |
| GTATTGGAAACAAATGTAAG+AGG | - | chr4.3:20838944-20838963 | None:intergenic | 30.0% | |
| TAACAGGAAGTGAAATTACT+TGG | + | chr4.3:20839955-20839974 | MS.gene068028:intron | 30.0% | |
| TATAATTGGAATACACAGGA+AGG | + | chr4.3:20840825-20840844 | MS.gene068028:CDS | 30.0% | |
| TGATATTTCGTTAACTACAG+GGG | - | chr4.3:20838176-20838195 | None:intergenic | 30.0% | |
| TGTTTCCAACAATGTTTAAC+GGG | + | chr4.3:20839993-20840012 | MS.gene068028:intron | 30.0% | |
| TTCATTAGATAGCTGAAAGA+CGG | - | chr4.3:20840892-20840911 | None:intergenic | 30.0% | |
| ! | ATATATGACTTTGACTTTCC+TGG | + | chr4.3:20837800-20837819 | MS.gene068028:intron | 30.0% |
| ! | CAATGAGAGCACATATTATA+TGG | + | chr4.3:20840955-20840974 | MS.gene068028:CDS | 30.0% |
| ! | CTTTGCAAAGAAGTATAACA+TGG | + | chr4.3:20840717-20840736 | MS.gene068028:CDS | 30.0% |
| ! | TTTTCACTCTTTCCTAACTA+GGG | + | chr4.3:20840139-20840158 | MS.gene068028:intron | 30.0% |
| ! | TTTTTCACTCTTTCCTAACT+AGG | + | chr4.3:20840138-20840157 | MS.gene068028:intron | 30.0% |
| !! | CAAATGCTGTTTCAAATACA+GGG | - | chr4.3:20840997-20841016 | None:intergenic | 30.0% |
| !! | GGTTCGTTGTTTTATATTGA+TGG | + | chr4.3:20841153-20841172 | MS.gene068028:intron | 30.0% |
| !!! | GCAGATTTTGGTCATTTTTA+TGG | + | chr4.3:20841446-20841465 | MS.gene068028:CDS | 30.0% |
| !!! | TCTCAAAAAGTGCCTTTTTT+TGG | - | chr4.3:20840450-20840469 | None:intergenic | 30.0% |
| AAATAGAACCATCGTTGGAA+AGG | - | chr4.3:20837614-20837633 | None:intergenic | 35.0% | |
| AACATACTATGCTTGCAAGT+AGG | + | chr4.3:20840511-20840530 | MS.gene068028:intron | 35.0% | |
| AAGCTAGCCAATTTAAAGGA+TGG | - | chr4.3:20841054-20841073 | None:intergenic | 35.0% | |
| AAGGAAGGATCTAAACTACT+AGG | - | chr4.3:20839336-20839355 | None:intergenic | 35.0% | |
| AATCCATTTACATCTGGTGA+TGG | + | chr4.3:20841410-20841429 | MS.gene068028:CDS | 35.0% | |
| ACAAACAGAACTAGCATAAC+AGG | + | chr4.3:20838765-20838784 | MS.gene068028:intron | 35.0% | |
| ACCATCTTTATCACGTAACA+GGG | + | chr4.3:20841505-20841524 | MS.gene068028:CDS | 35.0% | |
| AGAACCATATTCCAAGAGTT+GGG | + | chr4.3:20840927-20840946 | MS.gene068028:intron | 35.0% | |
| AGATTAATTGTCCCCTAGTT+AGG | - | chr4.3:20840154-20840173 | None:intergenic | 35.0% | |
| AGTAGTTTAGATCCTTCCTT+AGG | + | chr4.3:20839336-20839355 | MS.gene068028:intron | 35.0% | |
| ATCACCAGATGTAAATGGAT+TGG | - | chr4.3:20841411-20841430 | None:intergenic | 35.0% | |
| ATCCTTGAGAAGATGATGAA+GGG | - | chr4.3:20837649-20837668 | None:intergenic | 35.0% | |
| ATTATGAACTTAGACACTGC+AGG | + | chr4.3:20838699-20838718 | MS.gene068028:intron | 35.0% | |
| CAAAAATATGATTGTGGCAG+GGG | - | chr4.3:20839504-20839523 | None:intergenic | 35.0% | |
| CCAAAAGCTAGCCAATTTAA+AGG | - | chr4.3:20841058-20841077 | None:intergenic | 35.0% | |
| CCCCCTGTATTTGAATTATT+TGG | - | chr4.3:20838809-20838828 | None:intergenic | 35.0% | |
| CCCCTGTAGTTTATCAATAA+TGG | - | chr4.3:20838840-20838859 | None:intergenic | 35.0% | |
| CTAACGTTTATCAATTTCGG+GGG | + | chr4.3:20839727-20839746 | MS.gene068028:intron | 35.0% | |
| CTAACGTTTATCAATTTCGG+GGG | - | chr4.3:20839746-20839727 | None:intergenic | 35.0% | |
| CTTTCTACTTCTGCTTCTAA+TGG | + | chr4.3:20840861-20840880 | MS.gene068028:intron | 35.0% | |
| GAAGCAGAAGTAGAAAGTTT+AGG | - | chr4.3:20840858-20840877 | None:intergenic | 35.0% | |
| GATATTTCGTTAACTACAGG+GGG | - | chr4.3:20838175-20838194 | None:intergenic | 35.0% | |
| GGCATGATTATATGGCTTAT+AGG | + | chr4.3:20841299-20841318 | MS.gene068028:intron | 35.0% | |
| GTAGTTTAGATCCTTCCTTA+GGG | + | chr4.3:20839337-20839356 | MS.gene068028:intron | 35.0% | |
| GTTGTCTATCAAATTGTCGT+CGG | + | chr4.3:20840193-20840212 | MS.gene068028:intron | 35.0% | |
| TAACGTTTATCAATTTCGGG+GGG | + | chr4.3:20839728-20839747 | MS.gene068028:intron | 35.0% | |
| TAACGTTTATCAATTTCGGG+GGG | - | chr4.3:20839747-20839728 | None:intergenic | 35.0% | |
| TAATTTGATTGCAGGAAGCA+TGG | + | chr4.3:20840605-20840624 | MS.gene068028:intron | 35.0% | |
| TATCCTTGAGAAGATGATGA+AGG | - | chr4.3:20837650-20837669 | None:intergenic | 35.0% | |
| TCACATCTCTCTCAAGAATT+GGG | - | chr4.3:20840753-20840772 | None:intergenic | 35.0% | |
| TCACTTTGTGGACCAAAAAA+AGG | + | chr4.3:20840435-20840454 | MS.gene068028:CDS | 35.0% | |
| TCATTAGATAGCTGAAAGAC+GGG | - | chr4.3:20840891-20840910 | None:intergenic | 35.0% | |
| TGGCTTATTAGTAACAGACA+TGG | + | chr4.3:20841529-20841548 | MS.gene068028:CDS | 35.0% | |
| TGGTGTTTAGAAGCAATTGT+GGG | + | chr4.3:20839256-20839275 | MS.gene068028:intron | 35.0% | |
| TGTTGGATGGAGGAAATTAA+CGG | + | chr4.3:20839690-20839709 | MS.gene068028:intron | 35.0% | |
| TGTTGGATGGAGGAAATTAA+CGG | - | chr4.3:20839709-20839690 | None:intergenic | 35.0% | |
| TTCACATCTCTCTCAAGAAT+TGG | - | chr4.3:20840754-20840773 | None:intergenic | 35.0% | |
| TTCAGAAATGGTGAAGTTGA+TGG | - | chr4.3:20839172-20839191 | None:intergenic | 35.0% | |
| TTTCACTCTTTCCTAACTAG+GGG | + | chr4.3:20840140-20840159 | MS.gene068028:intron | 35.0% | |
| ! | ACTTTGTTGCTTCAATCAAC+CGG | + | chr4.3:20841366-20841385 | MS.gene068028:CDS | 35.0% |
| ! | CCTGTATTTGAAACAGCATT+TGG | + | chr4.3:20840995-20841014 | MS.gene068028:CDS | 35.0% |
| ! | GAGAGCACATATTATATGGA+AGG | + | chr4.3:20840959-20840978 | MS.gene068028:CDS | 35.0% |
| ! | GGGAATTGAAGTTTGCTTTA+GGG | - | chr4.3:20839124-20839143 | None:intergenic | 35.0% |
| ! | TCACCAGATGTAAATGGATT+GGG | - | chr4.3:20841410-20841429 | None:intergenic | 35.0% |
| ! | TTGGTGTTTAGAAGCAATTG+TGG | + | chr4.3:20839255-20839274 | MS.gene068028:intron | 35.0% |
| !! | CCAAATGCTGTTTCAAATAC+AGG | - | chr4.3:20840998-20841017 | None:intergenic | 35.0% |
| !! | TGTTATGCTAGTTCTGTTTG+TGG | - | chr4.3:20838766-20838785 | None:intergenic | 35.0% |
| !!! | CCTTTAAATTGGCTAGCTTT+TGG | + | chr4.3:20841055-20841074 | MS.gene068028:CDS | 35.0% |
| AACGTTTATCAATTTCGGGG+GGG | + | chr4.3:20839729-20839748 | MS.gene068028:intron | 40.0% | |
| AAGTCAATCGTTTGCTTACC+GGG | + | chr4.3:20837956-20837975 | MS.gene068028:CDS | 40.0% | |
| AGAATGACCTGGAAATGATG+CGG | - | chr4.3:20837681-20837700 | None:intergenic | 40.0% | |
| ATCTAACATAACCCACCCTA+AGG | - | chr4.3:20839355-20839374 | None:intergenic | 40.0% | |
| ATGACTTGAGGCTCAAATTC+TGG | - | chr4.3:20841650-20841669 | None:intergenic | 40.0% | |
| CACCATCTTTATCACGTAAC+AGG | + | chr4.3:20841504-20841523 | MS.gene068028:CDS | 40.0% | |
| CACTTCCCGTTAAACATTGT+TGG | - | chr4.3:20840001-20840020 | None:intergenic | 40.0% | |
| CACTTCCTGTTAAACATTGC+TGG | - | chr4.3:20839947-20839966 | None:intergenic | 40.0% | |
| CAGAACCATATTCCAAGAGT+TGG | + | chr4.3:20840926-20840945 | MS.gene068028:intron | 40.0% | |
| CGTTTCCAGCAATGTTTAAC+AGG | + | chr4.3:20839939-20839958 | MS.gene068028:intron | 40.0% | |
| GAACCAGCAGCATCAATAAT+TGG | - | chr4.3:20840481-20840500 | None:intergenic | 40.0% | |
| GAACCATATTCCAAGAGTTG+GGG | + | chr4.3:20840928-20840947 | MS.gene068028:intron | 40.0% | |
| GAAGTCAATCGTTTGCTTAC+CGG | + | chr4.3:20837955-20837974 | MS.gene068028:CDS | 40.0% | |
| GGGAATCACGGCAATATAAT+TGG | + | chr4.3:20840811-20840830 | MS.gene068028:CDS | 40.0% | |
| GGTTTGAAAGAAGAATGACC+TGG | - | chr4.3:20837692-20837711 | None:intergenic | 40.0% | |
| GTAGGCACCATCCTTTAAAT+TGG | + | chr4.3:20841044-20841063 | MS.gene068028:CDS | 40.0% | |
| TAGAAGCAATTGTGGGAGAA+AGG | + | chr4.3:20839263-20839282 | MS.gene068028:intron | 40.0% | |
| TCCCTGTTACGTGATAAAGA+TGG | - | chr4.3:20841509-20841528 | None:intergenic | 40.0% | |
| TCTTAAACCGCATCATTTCC+AGG | + | chr4.3:20837671-20837690 | MS.gene068028:CDS | 40.0% | |
| TCTTATGAAGTAAGGGGTCA+CGG | - | chr4.3:20841673-20841692 | None:intergenic | 40.0% | |
| TCTTTATCACGTAACAGGGA+TGG | + | chr4.3:20841509-20841528 | MS.gene068028:CDS | 40.0% | |
| TTCCCCAATCCATTTACATC+TGG | + | chr4.3:20841404-20841423 | MS.gene068028:CDS | 40.0% | |
| TTCCCTTCATCATCTTCTCA+AGG | + | chr4.3:20837644-20837663 | MS.gene068028:CDS | 40.0% | |
| TTGCCATCACCAGATGTAAA+TGG | - | chr4.3:20841416-20841435 | None:intergenic | 40.0% | |
| TTTAGATCCTTCCTTAGGGT+GGG | + | chr4.3:20839341-20839360 | MS.gene068028:intron | 40.0% | |
| TTTGATTGTGTGGCAGGTTT+CGG | - | chr4.3:20839431-20839450 | None:intergenic | 40.0% | |
| ! | AATCTGCATGGAAAGTGCAT+TGG | + | chr4.3:20837880-20837899 | MS.gene068028:intron | 40.0% |
| ! | CACTTTTCCACAATTAAGCC+CGG | - | chr4.3:20837977-20837996 | None:intergenic | 40.0% |
| ! | CTTTGTTGCTTCAATCAACC+GGG | + | chr4.3:20841367-20841386 | MS.gene068028:CDS | 40.0% |
| ! | GGGGAATTGAAGTTTGCTTT+AGG | - | chr4.3:20839125-20839144 | None:intergenic | 40.0% |
| ! | GGTTTTTGACACGAACTTGT+TGG | + | chr4.3:20838860-20838879 | MS.gene068028:intron | 40.0% |
| ! | TCCAACGATGGTTCTATTTG+TGG | + | chr4.3:20837615-20837634 | MS.gene068028:CDS | 40.0% |
| !! | ACATGGATCTTAACTTGTGC+AGG | + | chr4.3:20841546-20841565 | MS.gene068028:CDS | 40.0% |
| !! | CACCAGATGTAAATGGATTG+GGG | - | chr4.3:20841409-20841428 | None:intergenic | 40.0% |
| !! | CTTGGATTGGTTAAACGAGA+TGG | + | chr4.3:20840226-20840245 | MS.gene068028:intron | 40.0% |
| !! | GTTGATGGTGTGTTTCGATT+TGG | - | chr4.3:20839157-20839176 | None:intergenic | 40.0% |
| !! | GTTTCGATTTGGACAGAAGA+GGG | - | chr4.3:20839146-20839165 | None:intergenic | 40.0% |
| !! | TATTGATGCTGCTGGTTCAT+CGG | + | chr4.3:20840483-20840502 | MS.gene068028:CDS | 40.0% |
| !! | TGCCATTTGCCTTTTGTACA+CGG | + | chr4.3:20840632-20840651 | MS.gene068028:CDS | 40.0% |
| !! | TGTTTCGATTTGGACAGAAG+AGG | - | chr4.3:20839147-20839166 | None:intergenic | 40.0% |
| !! | TTTCGATTTGGACAGAAGAG+GGG | - | chr4.3:20839145-20839164 | None:intergenic | 40.0% |
| !! | TTTGTTGATTCTCCATCAGC+AGG | - | chr4.3:20840685-20840704 | None:intergenic | 40.0% |
| !!! | AGCTTTTGGCTTAAATGGTG+CGG | + | chr4.3:20841069-20841088 | MS.gene068028:CDS | 40.0% |
| !!! | TGCTGCTGCTTTTTAAGTCA+TGG | + | chr4.3:20839859-20839878 | MS.gene068028:intron | 40.0% |
| !!! | TGGCTAGCTTTTGGCTTAAA+TGG | + | chr4.3:20841064-20841083 | MS.gene068028:CDS | 40.0% |
| AAAGTGAGCAGTTGTTGGGA+TGG | - | chr4.3:20840422-20840441 | None:intergenic | 45.0% | |
| AACATAACCCACCCTAAGGA+AGG | - | chr4.3:20839351-20839370 | None:intergenic | 45.0% | |
| ACAGCTCTCTCTGTCAAACA+TGG | + | chr4.3:20838027-20838046 | MS.gene068028:CDS | 45.0% | |
| ACGTGATAAAGATGGTGTGC+AGG | - | chr4.3:20841501-20841520 | None:intergenic | 45.0% | |
| ACTCGTATCGTGCAGTCATT+CGG | - | chr4.3:20841595-20841614 | None:intergenic | 45.0% | |
| AGAGAGCTGTAGCAGATTCT+GGG | - | chr4.3:20838017-20838036 | None:intergenic | 45.0% | |
| AGGTTCACTGAGTTCACCAA+CGG | - | chr4.3:20841119-20841138 | None:intergenic | 45.0% | |
| AGTCCCCAACTCTTGGAATA+TGG | - | chr4.3:20840934-20840953 | None:intergenic | 45.0% | |
| ATGGAGGAAATTAACGGAGG+GGG | + | chr4.3:20839696-20839715 | MS.gene068028:intron | 45.0% | |
| ATGGAGGAAATTAACGGAGG+GGG | - | chr4.3:20839715-20839696 | None:intergenic | 45.0% | |
| ATTGACGCGCCTTGCAATTT+CGG | + | chr4.3:20839783-20839802 | MS.gene068028:intron | 45.0% | |
| CAACTCAACCTTTCCAACGA+TGG | + | chr4.3:20837603-20837622 | MS.gene068028:CDS | 45.0% | |
| CAATTGTGGGAGAAAGGAGA+AGG | + | chr4.3:20839269-20839288 | MS.gene068028:intron | 45.0% | |
| CCAACTCAAAAGAGAGGGTT+CGG | - | chr4.3:20840036-20840055 | None:intergenic | 45.0% | |
| CCACAAAGTGAGCAGTTGTT+GGG | - | chr4.3:20840426-20840445 | None:intergenic | 45.0% | |
| CGGAATCTATGAGCTTGGAT+TGG | + | chr4.3:20840213-20840232 | MS.gene068028:intron | 45.0% | |
| CTTGAGAGAGATGTGAACCA+TGG | + | chr4.3:20840757-20840776 | MS.gene068028:CDS | 45.0% | |
| GAATTTGCAGAACCTGCTGA+TGG | + | chr4.3:20840670-20840689 | MS.gene068028:CDS | 45.0% | |
| GAGCCAATTATTGATGCTGC+TGG | + | chr4.3:20840475-20840494 | MS.gene068028:CDS | 45.0% | |
| GATGGAGGAAATTAACGGAG+GGG | + | chr4.3:20839695-20839714 | MS.gene068028:intron | 45.0% | |
| GATGGAGGAAATTAACGGAG+GGG | - | chr4.3:20839714-20839695 | None:intergenic | 45.0% | |
| GCCACAAATAGAACCATCGT+TGG | - | chr4.3:20837619-20837638 | None:intergenic | 45.0% | |
| GGATGGAGGAAATTAACGGA+GGG | + | chr4.3:20839694-20839713 | MS.gene068028:intron | 45.0% | |
| GGATGGAGGAAATTAACGGA+GGG | - | chr4.3:20839713-20839694 | None:intergenic | 45.0% | |
| GTGAACTCAGTGAACCTATG+TGG | + | chr4.3:20841122-20841141 | MS.gene068028:CDS | 45.0% | |
| GTTTAGATCCTTCCTTAGGG+TGG | + | chr4.3:20839340-20839359 | MS.gene068028:intron | 45.0% | |
| TAACTGCCACATCAGCATGT+TGG | + | chr4.3:20839673-20839692 | MS.gene068028:intron | 45.0% | |
| TAACTGCCACATCAGCATGT+TGG | - | chr4.3:20839692-20839673 | None:intergenic | 45.0% | |
| TCATTGAAGTCCCCAACTCT+TGG | - | chr4.3:20840941-20840960 | None:intergenic | 45.0% | |
| TCCACAAAGTGAGCAGTTGT+TGG | - | chr4.3:20840427-20840446 | None:intergenic | 45.0% | |
| TCCCGTGTACAAAAGGCAAA+TGG | - | chr4.3:20840637-20840656 | None:intergenic | 45.0% | |
| TCCTGCCAACTCAAAAGAGA+GGG | - | chr4.3:20840041-20840060 | None:intergenic | 45.0% | |
| TGAACCATGGAGAGGTTATG+TGG | + | chr4.3:20840770-20840789 | MS.gene068028:CDS | 45.0% | |
| TGAACCTATGTGGCCAATAG+AGG | + | chr4.3:20841132-20841151 | MS.gene068028:CDS | 45.0% | |
| TGCACGATACGAGTTGTATG+CGG | + | chr4.3:20841601-20841620 | MS.gene068028:CDS | 45.0% | |
| TGGATGGAGGAAATTAACGG+AGG | + | chr4.3:20839693-20839712 | MS.gene068028:intron | 45.0% | |
| TGGATGGAGGAAATTAACGG+AGG | - | chr4.3:20839712-20839693 | None:intergenic | 45.0% | |
| TGTTCCACATAACCTCTCCA+TGG | - | chr4.3:20840777-20840796 | None:intergenic | 45.0% | |
| TTGATTGTGTGGCAGGTTTC+GGG | - | chr4.3:20839478-20839497 | None:intergenic | 45.0% | |
| TTGCTTACCGGGCTTAATTG+TGG | + | chr4.3:20837967-20837986 | MS.gene068028:CDS | 45.0% | |
| TTGCTTCAATCAACCGGGTT+GGG | + | chr4.3:20841372-20841391 | MS.gene068028:CDS | 45.0% | |
| TTTGTACACGGGAGAAAAGG+TGG | + | chr4.3:20840644-20840663 | MS.gene068028:CDS | 45.0% | |
| ! | AAACCAGCACACGCAGATTT+TGG | + | chr4.3:20841434-20841453 | MS.gene068028:CDS | 45.0% |
| ! | AAGAGAACCTCGAGTTGTGA+GGG | + | chr4.3:20840372-20840391 | MS.gene068028:CDS | 45.0% |
| ! | CCTTTTCTCCCGTGTACAAA+AGG | - | chr4.3:20840644-20840663 | None:intergenic | 45.0% |
| ! | CCTTTTGTACACGGGAGAAA+AGG | + | chr4.3:20840641-20840660 | MS.gene068028:CDS | 45.0% |
| ! | CTATGTGAGTATCGTGTTGC+AGG | + | chr4.3:20837933-20837952 | MS.gene068028:intron | 45.0% |
| ! | GCCATTTGCCTTTTGTACAC+GGG | + | chr4.3:20840633-20840652 | MS.gene068028:CDS | 45.0% |
| ! | TAAGAGAACCTCGAGTTGTG+AGG | + | chr4.3:20840371-20840390 | MS.gene068028:CDS | 45.0% |
| !! | ATGCTAGTTCTGTTTGTGGC+TGG | - | chr4.3:20838762-20838781 | None:intergenic | 45.0% |
| !! | ATTGATGCTGCTGGTTCATC+GGG | + | chr4.3:20840484-20840503 | MS.gene068028:CDS | 45.0% |
| !! | TTCGATTTGGACAGAAGAGG+GGG | - | chr4.3:20839144-20839163 | None:intergenic | 45.0% |
| !!! | CAAACATGGTTTTGATGCCC+AGG | + | chr4.3:20838041-20838060 | MS.gene068028:CDS | 45.0% |
| AAACCAACCCTCACAACTCG+AGG | - | chr4.3:20840382-20840401 | None:intergenic | 50.0% | |
| AATACCCCCCCGAAATTGCA+AGG | - | chr4.3:20839795-20839814 | None:intergenic | 50.0% | |
| ATACCCCCCCTGAAATTGCA+AGG | + | chr4.3:20838138-20838157 | MS.gene068028:intron | 50.0% | |
| CACATCAGCATGTTGGATGG+AGG | + | chr4.3:20839680-20839699 | MS.gene068028:intron | 50.0% | |
| CACATCAGCATGTTGGATGG+AGG | - | chr4.3:20839699-20839680 | None:intergenic | 50.0% | |
| CACTGCCACATGGTCAGAAA+AGG | + | chr4.3:20838291-20838310 | MS.gene068028:intron | 50.0% | |
| CACTGCCACATGGTCAGAAA+AGG | - | chr4.3:20838310-20838291 | None:intergenic | 50.0% | |
| CCCAACAACTGCTCACTTTG+TGG | + | chr4.3:20840423-20840442 | MS.gene068028:CDS | 50.0% | |
| CGAACCTCTATTGGCCACAT+AGG | - | chr4.3:20841139-20841158 | None:intergenic | 50.0% | |
| CTCCATCCAACATGCTGATG+TGG | + | chr4.3:20838249-20838268 | MS.gene068028:intron | 50.0% | |
| CTCCATCCAACATGCTGATG+TGG | - | chr4.3:20838268-20838249 | None:intergenic | 50.0% | |
| GAGAGAGCTGTAGCAGATTC+TGG | - | chr4.3:20838018-20838037 | None:intergenic | 50.0% | |
| GAGAGATGTGAACCATGGAG+AGG | + | chr4.3:20840762-20840781 | MS.gene068028:CDS | 50.0% | |
| GAGTTGGCAGGACCGAAATA+TGG | + | chr4.3:20840049-20840068 | MS.gene068028:intron | 50.0% | |
| GCCGTCGTAATTGGGAATCA+CGG | + | chr4.3:20840799-20840818 | MS.gene068028:CDS | 50.0% | |
| GCCGTGATTCCCAATTACGA+CGG | - | chr4.3:20840803-20840822 | None:intergenic | 50.0% | |
| GGAACACTGCCGTCGTAATT+GGG | + | chr4.3:20840791-20840810 | MS.gene068028:CDS | 50.0% | |
| GTCCTGCCAACTCAAAAGAG+AGG | - | chr4.3:20840042-20840061 | None:intergenic | 50.0% | |
| GTCGTCGGAATCTATGAGCT+TGG | + | chr4.3:20840208-20840227 | MS.gene068028:intron | 50.0% | |
| GTTGCTTCAATCAACCGGGT+TGG | + | chr4.3:20841371-20841390 | MS.gene068028:CDS | 50.0% | |
| TGACCAAAATCTGCGTGTGC+TGG | - | chr4.3:20841440-20841459 | None:intergenic | 50.0% | |
| TGACGCGCCTTGCAATTTCA+GGG | - | chr4.3:20838148-20838167 | None:intergenic | 50.0% | |
| TGATTGTGTGGCAGGTTTCG+GGG | - | chr4.3:20839477-20839496 | None:intergenic | 50.0% | |
| TGCCACATCAGCATGTTGGA+TGG | + | chr4.3:20839677-20839696 | MS.gene068028:intron | 50.0% | |
| TGCCACATCAGCATGTTGGA+TGG | - | chr4.3:20839696-20839677 | None:intergenic | 50.0% | |
| TGGAACACTGCCGTCGTAAT+TGG | + | chr4.3:20840790-20840809 | MS.gene068028:CDS | 50.0% | |
| TGGAGGAAATTAACGGAGGG+GGG | + | chr4.3:20839697-20839716 | MS.gene068028:intron | 50.0% | |
| TGGAGGAAATTAACGGAGGG+GGG | - | chr4.3:20839716-20839697 | None:intergenic | 50.0% | |
| TTCACTGAGTTCACCAACGG+TGG | - | chr4.3:20841116-20841135 | None:intergenic | 50.0% | |
| TTGACGCGCCTTGCAATTTC+AGG | - | chr4.3:20839803-20839784 | None:intergenic | 50.0% | |
| TTGACGCGCCTTGCAATTTC+GGG | + | chr4.3:20839784-20839803 | MS.gene068028:intron | 50.0% | |
| ! | AAAAGGCATGCCACGTCAGA+GGG | + | chr4.3:20838308-20838327 | MS.gene068028:intron | 50.0% |
| ! | AAAAGGCATGCCACGTCAGA+GGG | - | chr4.3:20838327-20838308 | None:intergenic | 50.0% |
| ! | GCATGCCTTTTCTGACCATG+TGG | + | chr4.3:20839632-20839651 | MS.gene068028:intron | 50.0% |
| ! | GCATGCCTTTTCTGACCATG+TGG | - | chr4.3:20839651-20839632 | None:intergenic | 50.0% |
| ! | GGGGTATTTGATTGTGTGGC+AGG | - | chr4.3:20839437-20839456 | None:intergenic | 50.0% |
| ! | TGGTGGCGTGTTTCTGCTAT+GGG | - | chr4.3:20838742-20838761 | None:intergenic | 50.0% |
| !! | CAGGGGGGTATTTGATTGTG+TGG | - | chr4.3:20839441-20839460 | None:intergenic | 50.0% |
| !! | CCGAACCCTCTCTTTTGAGT+TGG | + | chr4.3:20840033-20840052 | MS.gene068028:intron | 50.0% |
| !! | CTAGTTCTGTTTGTGGCTGG+TGG | - | chr4.3:20838759-20838778 | None:intergenic | 50.0% |
| !! | GCAATTTCAGGGGGGGTATT+TGG | - | chr4.3:20838137-20838156 | None:intergenic | 50.0% |
| !! | TGCAATTTCGGGGGGGTATT+TGG | + | chr4.3:20839795-20839814 | MS.gene068028:intron | 50.0% |
| !! | TTGATGCTGCTGGTTCATCG+GGG | + | chr4.3:20840485-20840504 | MS.gene068028:CDS | 50.0% |
| !!! | ACCCTCTCTTTTGAGTTGGC+AGG | + | chr4.3:20840037-20840056 | MS.gene068028:intron | 50.0% |
| AAGGGGTCACGGATGACTTG+AGG | - | chr4.3:20841662-20841681 | None:intergenic | 55.0% | |
| ACGCGCCTTGCAATTTCAGG+GGG | - | chr4.3:20838146-20838165 | None:intergenic | 55.0% | |
| ATTGTGTGGCAGGTTTCGGG+GGG | - | chr4.3:20839475-20839494 | None:intergenic | 55.0% | |
| GACGCGCCTTGCAATTTCAG+GGG | - | chr4.3:20838147-20838166 | None:intergenic | 55.0% | |
| GATGGTGTGCAGGATGCATC+TGG | - | chr4.3:20841491-20841510 | None:intergenic | 55.0% | |
| GATTGTGTGGCAGGTTTCGG+GGG | - | chr4.3:20839476-20839495 | None:intergenic | 55.0% | |
| GGAATGTCTCAGTCCCAACC+CGG | - | chr4.3:20841388-20841407 | None:intergenic | 55.0% | |
| TCAATTACCCCCCTCTGACG+TGG | + | chr4.3:20839610-20839629 | MS.gene068028:intron | 55.0% | |
| TCAATTACCCCCCTCTGACG+TGG | - | chr4.3:20839629-20839610 | None:intergenic | 55.0% | |
| TGACGCGCCTTGCAATTTCG+GGG | + | chr4.3:20839785-20839804 | MS.gene068028:intron | 55.0% | |
| ! | AAAGGCATGCCACGTCAGAG+GGG | + | chr4.3:20838309-20838328 | MS.gene068028:intron | 55.0% |
| ! | AAAGGCATGCCACGTCAGAG+GGG | - | chr4.3:20838328-20838309 | None:intergenic | 55.0% |
| ! | CTGGTGGCGTGTTTCTGCTA+TGG | - | chr4.3:20838743-20838762 | None:intergenic | 55.0% |
| ! | GAAAAGGCATGCCACGTCAG+AGG | + | chr4.3:20838307-20838326 | MS.gene068028:intron | 55.0% |
| ! | GAAAAGGCATGCCACGTCAG+AGG | - | chr4.3:20838326-20838307 | None:intergenic | 55.0% |
| ! | GAACCTCGAGTTGTGAGGGT+TGG | + | chr4.3:20840376-20840395 | MS.gene068028:CDS | 55.0% |
| !! | GGCAGGGGCTTTTGATTGTG+TGG | - | chr4.3:20839489-20839508 | None:intergenic | 55.0% |
| !! | GGGGCTTTTGATTGTGTGGC+AGG | - | chr4.3:20839485-20839504 | None:intergenic | 55.0% |
| !! | TGATGCTGCTGGTTCATCGG+GGG | + | chr4.3:20840486-20840505 | MS.gene068028:CDS | 55.0% |
| AAGGCATGCCACGTCAGAGG+GGG | + | chr4.3:20838310-20838329 | MS.gene068028:intron | 60.0% | |
| AAGGCATGCCACGTCAGAGG+GGG | - | chr4.3:20838329-20838310 | None:intergenic | 60.0% | |
| ACCATGTGGCAGTGCCACGT+GGG | + | chr4.3:20839646-20839665 | MS.gene068028:intron | 60.0% | |
| ACCATGTGGCAGTGCCACGT+GGG | - | chr4.3:20839665-20839646 | None:intergenic | 60.0% | |
| ACGCGCCTTGCAATTTCGGG+GGG | + | chr4.3:20839787-20839806 | MS.gene068028:intron | 60.0% | |
| AGTTCACCAACGGTGGCAGC+AGG | - | chr4.3:20841109-20841128 | None:intergenic | 60.0% | |
| CGCGCCTTGCAATTTCAGGG+GGG | - | chr4.3:20838145-20838164 | None:intergenic | 60.0% | |
| GACGCGCCTTGCAATTTCGG+GGG | + | chr4.3:20839786-20839805 | MS.gene068028:intron | 60.0% | |
| GCGCCTTGCAATTTCAGGGG+GGG | - | chr4.3:20838144-20838163 | None:intergenic | 60.0% | |
| GCTATGGGCCTGCAGTGTCT+GGG | - | chr4.3:20838727-20838746 | None:intergenic | 60.0% | |
| GTGGCAGTTAACTGCCCACG+TGG | + | chr4.3:20838268-20838287 | MS.gene068028:intron | 60.0% | |
| GTGGCAGTTAACTGCCCACG+TGG | - | chr4.3:20838287-20838268 | None:intergenic | 60.0% | |
| GTTCACCAACGGTGGCAGCA+GGG | - | chr4.3:20841108-20841127 | None:intergenic | 60.0% | |
| TGCTATGGGCCTGCAGTGTC+TGG | - | chr4.3:20838728-20838747 | None:intergenic | 60.0% | |
| TTCAACCCTGCTGCCACCGT+TGG | + | chr4.3:20841100-20841119 | MS.gene068028:CDS | 60.0% | |
| TTGTGTGGCAGGTTTCGGGG+GGG | - | chr4.3:20839474-20839493 | None:intergenic | 60.0% | |
| ! | GCAGGTTTCGGGGGGGTTTT+TGG | - | chr4.3:20839467-20839486 | None:intergenic | 60.0% |
| !!! | CGGGGGGGTTTTTGGCTACA+GGG | - | chr4.3:20839459-20839478 | None:intergenic | 60.0% |
| !!! | GGGGGGGTTTTTGGCTACAG+GGG | - | chr4.3:20839458-20839477 | None:intergenic | 60.0% |
| !!! | GGGGGGTTTTTGGCTACAGG+GGG | - | chr4.3:20839457-20839476 | None:intergenic | 60.0% |
| !!! | GGGGGTTTTTGGCTACAGGG+GGG | - | chr4.3:20839456-20839475 | None:intergenic | 60.0% |
| !!! | TCGGGGGGGTTTTTGGCTAC+AGG | - | chr4.3:20839460-20839479 | None:intergenic | 60.0% |
| AGGCATGCCACGTCAGAGGG+GGG | + | chr4.3:20838311-20838330 | MS.gene068028:intron | 65.0% | |
| AGGCATGCCACGTCAGAGGG+GGG | - | chr4.3:20838330-20838311 | None:intergenic | 65.0% | |
| CGCGCCTTGCAATTTCGGGG+GGG | + | chr4.3:20839788-20839807 | MS.gene068028:intron | 65.0% | |
| GACCATGTGGCAGTGCCACG+TGG | + | chr4.3:20839645-20839664 | MS.gene068028:intron | 65.0% | |
| GACCATGTGGCAGTGCCACG+TGG | - | chr4.3:20839664-20839645 | None:intergenic | 65.0% | |
| TGCAGGCACCCAGACACTGC+AGG | + | chr4.3:20838716-20838735 | MS.gene068028:intron | 65.0% | |
| GCCCACGTGGCACTGCCACA+TGG | + | chr4.3:20838281-20838300 | MS.gene068028:intron | 70.0% | |
| GCCCACGTGGCACTGCCACA+TGG | - | chr4.3:20838300-20838281 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 20837570 | 20841700 | 20837570 | ID=MS.gene068028 |
| chr4.3 | mRNA | 20837570 | 20841700 | 20837570 | ID=MS.gene068028.t1;Parent=MS.gene068028 |
| chr4.3 | exon | 20837570 | 20837692 | 20837570 | ID=MS.gene068028.t1.exon1;Parent=MS.gene068028.t1 |
| chr4.3 | CDS | 20837570 | 20837692 | 20837570 | ID=cds.MS.gene068028.t1;Parent=MS.gene068028.t1 |
| chr4.3 | exon | 20837955 | 20838062 | 20837955 | ID=MS.gene068028.t1.exon2;Parent=MS.gene068028.t1 |
| chr4.3 | CDS | 20837955 | 20838062 | 20837955 | ID=cds.MS.gene068028.t1;Parent=MS.gene068028.t1 |
| chr4.3 | exon | 20840340 | 20840528 | 20840340 | ID=MS.gene068028.t1.exon3;Parent=MS.gene068028.t1 |
| chr4.3 | CDS | 20840340 | 20840528 | 20840340 | ID=cds.MS.gene068028.t1;Parent=MS.gene068028.t1 |
| chr4.3 | exon | 20840619 | 20840846 | 20840619 | ID=MS.gene068028.t1.exon4;Parent=MS.gene068028.t1 |
| chr4.3 | CDS | 20840619 | 20840846 | 20840619 | ID=cds.MS.gene068028.t1;Parent=MS.gene068028.t1 |
| chr4.3 | exon | 20840929 | 20841153 | 20840929 | ID=MS.gene068028.t1.exon5;Parent=MS.gene068028.t1 |
| chr4.3 | CDS | 20840929 | 20841153 | 20840929 | ID=cds.MS.gene068028.t1;Parent=MS.gene068028.t1 |
| chr4.3 | exon | 20841338 | 20841700 | 20841338 | ID=MS.gene068028.t1.exon6;Parent=MS.gene068028.t1 |
| chr4.3 | CDS | 20841338 | 20841700 | 20841338 | ID=cds.MS.gene068028.t1;Parent=MS.gene068028.t1 |
| Gene Sequence |
| Protein sequence |
